Lotus
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0069.6
         (167 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC86106 homologue to GP|21068666|emb|CAD31839. putative phosphol...   302  4e-83
TC77042 similar to GP|14532478|gb|AAK63967.1 AT4g11600/T5C23_30 ...   252  4e-68
TC77945 similar to SP|O24296|GSHY_PEA Phospholipid hydroperoxide...   233  3e-62
BM814275 similar to GP|21592603|gb unknown {Arabidopsis thaliana...   233  3e-62
BF634130 similar to GP|21592603|gb unknown {Arabidopsis thaliana...   217  2e-57
TC84569 weakly similar to GP|727367|gb|AAA64283.1|| Hyr1p {Sacch...   139  7e-34
TC89817 similar to GP|6179604|emb|CAB59895.1 glutathione peroxid...   120  3e-28
TC82540 similar to PIR|H83292|H83292 probable glutathione peroxi...   119  6e-28
TC77043 similar to PIR|S33618|S33618 glutathione peroxidase (EC ...    94  3e-20
TC91727 weakly similar to SP|Q9LYB4|GSHZ_ARATH Probable glutathi...    80  5e-16
TC79043 homologue to GP|6899842|dbj|BAA90524.1 peroxiredoxin Q {...    33  0.070
TC82134 similar to PIR|T07949|T07949 calcium binding protein - l...    27  3.8
CB892528 weakly similar to PIR|E96647|E966 hypothetical protein ...    26  6.5

>TC86106 homologue to GP|21068666|emb|CAD31839. putative phospholipid
           hydroperoxide glutathione peroxidase {Cicer arietinum},
           complete
          Length = 893

 Score =  302 bits (774), Expect = 4e-83
 Identities = 142/167 (85%), Positives = 160/167 (95%)
 Frame = +3

Query: 1   MAEQTSKSLYDFTVKDIRGNDVSLSQYSGKVLIIVNVASQCGLTQTNYKELNILYEKYKS 60
           MAE +SKS+YDFTVKDI GNDVSLSQY GKVL++VNVASQCGLTQTNYKELN+LY+KYK 
Sbjct: 129 MAENSSKSIYDFTVKDISGNDVSLSQYRGKVLLVVNVASQCGLTQTNYKELNVLYQKYKD 308

Query: 61  KGLEILAFPCNQFAGQEPGTNDEIQDVVCTRFKSEFPVFDKVEVNGKNAEPLFKFLKDQK 120
           +  EILAFPCNQF GQEPG+++EIQ+VVCTRFK+EFPVFDKVEVNGKNAEPL+KFLKDQK
Sbjct: 309 QDFEILAFPCNQFRGQEPGSSEEIQNVVCTRFKAEFPVFDKVEVNGKNAEPLYKFLKDQK 488

Query: 121 GGIFGDGIKWNFTKFLVNKEGKVVERYAPTTSPMKIEKDLEKLLQSS 167
           GGIFGDGIKWNFTKFLVNKEGKVV+RYAPTT+P+KIEKD+EKLL+SS
Sbjct: 489 GGIFGDGIKWNFTKFLVNKEGKVVDRYAPTTAPLKIEKDIEKLLRSS 629


>TC77042 similar to GP|14532478|gb|AAK63967.1 AT4g11600/T5C23_30
           {Arabidopsis thaliana}, partial (74%)
          Length = 1015

 Score =  252 bits (644), Expect = 4e-68
 Identities = 118/160 (73%), Positives = 139/160 (86%)
 Frame = +1

Query: 7   KSLYDFTVKDIRGNDVSLSQYSGKVLIIVNVASQCGLTQTNYKELNILYEKYKSKGLEIL 66
           +S++DFTVKD +GNDV+L  Y GKVLIIVNVASQCGLT +NY EL+ LYEKYKSKGLEIL
Sbjct: 259 QSIHDFTVKDAKGNDVNLGDYKGKVLIIVNVASQCGLTNSNYTELSQLYEKYKSKGLEIL 438

Query: 67  AFPCNQFAGQEPGTNDEIQDVVCTRFKSEFPVFDKVEVNGKNAEPLFKFLKDQKGGIFGD 126
           AFPCNQF  QEPG+ +EIQ+ VCTRFK+EFPVFDKV+VNG  A P++K+LK  KGG+FGD
Sbjct: 439 AFPCNQFGAQEPGSVEEIQNFVCTRFKAEFPVFDKVDVNGATAAPIYKYLKSSKGGLFGD 618

Query: 127 GIKWNFTKFLVNKEGKVVERYAPTTSPMKIEKDLEKLLQS 166
           GIKWNF+KFLV+K G VV+RYAPTTSP+ IEKDL KLL +
Sbjct: 619 GIKWNFSKFLVDKNGNVVDRYAPTTSPLSIEKDLLKLLDA 738


>TC77945 similar to SP|O24296|GSHY_PEA Phospholipid hydroperoxide
           glutathione peroxidase  chloroplast precursor (EC
           1.11.1.9) (PHGPx)., complete
          Length = 1006

 Score =  233 bits (594), Expect = 3e-62
 Identities = 108/160 (67%), Positives = 131/160 (81%)
 Frame = +1

Query: 5   TSKSLYDFTVKDIRGNDVSLSQYSGKVLIIVNVASQCGLTQTNYKELNILYEKYKSKGLE 64
           T KS+YDFTVKDI   DV LS++ GKVL+IVNVAS+CGLT +NY EL+ LYE +K KGLE
Sbjct: 310 TDKSIYDFTVKDIDKKDVPLSKFKGKVLLIVNVASRCGLTSSNYTELSHLYENFKDKGLE 489

Query: 65  ILAFPCNQFAGQEPGTNDEIQDVVCTRFKSEFPVFDKVEVNGKNAEPLFKFLKDQKGGIF 124
           +LAFPCNQF  QEPG+N+EI+   CTRFK+EFP+FDKV+VNG    P+++FLK   GG F
Sbjct: 490 VLAFPCNQFGMQEPGSNEEIKKFACTRFKAEFPIFDKVDVNGPFTAPVYQFLKSSSGGFF 669

Query: 125 GDGIKWNFTKFLVNKEGKVVERYAPTTSPMKIEKDLEKLL 164
           GD +KWNF KFLV+K GKVVERY PTTSP +IEKD++KLL
Sbjct: 670 GDLVKWNFEKFLVDKNGKVVERYPPTTSPFQIEKDIQKLL 789


>BM814275 similar to GP|21592603|gb unknown {Arabidopsis thaliana}, partial
           (96%)
          Length = 699

 Score =  233 bits (594), Expect = 3e-62
 Identities = 109/158 (68%), Positives = 132/158 (82%)
 Frame = +2

Query: 7   KSLYDFTVKDIRGNDVSLSQYSGKVLIIVNVASQCGLTQTNYKELNILYEKYKSKGLEIL 66
           KS+YDFT+KD  GNDV L+ Y GKVL+IVNVAS+CG+T +NY  LN LY+KYK KGLEIL
Sbjct: 71  KSVYDFTLKDGMGNDVDLATYKGKVLLIVNVASKCGMTNSNYVGLNQLYDKYKLKGLEIL 250

Query: 67  AFPCNQFAGQEPGTNDEIQDVVCTRFKSEFPVFDKVEVNGKNAEPLFKFLKDQKGGIFGD 126
           AFP NQF  +EPGTND+I D VCT FKSEFP+FDK+EVNG N+ PL+KFLK  K GIFGD
Sbjct: 251 AFPSNQFGEEEPGTNDQILDFVCTHFKSEFPIFDKIEVNGDNSAPLYKFLKSGKWGIFGD 430

Query: 127 GIKWNFTKFLVNKEGKVVERYAPTTSPMKIEKDLEKLL 164
            I+WNF KFLV+K+G+VV+RY PTTSP+ +E+D+ KLL
Sbjct: 431 DIQWNFAKFLVDKDGQVVDRYYPTTSPLSLERDICKLL 544


>BF634130 similar to GP|21592603|gb unknown {Arabidopsis thaliana}, partial
           (90%)
          Length = 563

 Score =  217 bits (552), Expect = 2e-57
 Identities = 102/148 (68%), Positives = 120/148 (80%)
 Frame = +2

Query: 7   KSLYDFTVKDIRGNDVSLSQYSGKVLIIVNVASQCGLTQTNYKELNILYEKYKSKGLEIL 66
           KS+YDFT+KD  GNDV L+ Y GKVL+IVNVAS+CG+T +NY  LN LY+KYK KGLEIL
Sbjct: 50  KSVYDFTLKDGMGNDVDLATYKGKVLLIVNVASKCGMTNSNYVGLNQLYDKYKLKGLEIL 229

Query: 67  AFPCNQFAGQEPGTNDEIQDVVCTRFKSEFPVFDKVEVNGKNAEPLFKFLKDQKGGIFGD 126
           AFP NQF  +EPGTND+I D VCT FKS FP+FDK+EVNG N+ PL+KFLK  K GIFGD
Sbjct: 230 AFPSNQFGEEEPGTNDQILDFVCTHFKSXFPIFDKIEVNGDNSAPLYKFLKSGKWGIFGD 409

Query: 127 GIKWNFTKFLVNKEGKVVERYAPTTSPM 154
            I WNF KFLV  +G+VV+RY PTTSP+
Sbjct: 410 DIXWNFAKFLVXXDGQVVDRYYPTTSPL 493


>TC84569 weakly similar to GP|727367|gb|AAA64283.1|| Hyr1p {Saccharomyces
           cerevisiae}, partial (79%)
          Length = 564

 Score =  139 bits (349), Expect = 7e-34
 Identities = 67/155 (43%), Positives = 95/155 (61%)
 Frame = +3

Query: 11  DFTVKDIRGNDVSLSQYSGKVLIIVNVASQCGLTQTNYKELNILYEKYKSKGLEILAFPC 70
           +F   DI+    + S + GKV+++VNVAS+CG T   Y  L  L+ KYK +GL +   PC
Sbjct: 3   NFEALDIKKKPFNFSAWKGKVVLLVNVASKCGYTP-QYTGLESLHNKYKDQGLIVAGLPC 179

Query: 71  NQFAGQEPGTNDEIQDVVCTRFKSEFPVFDKVEVNGKNAEPLFKFLKDQKGGIFGDGIKW 130
           NQF  QEPGT ++I       +   FP+F K++VNG+N  P++K+LK Q+ G     IKW
Sbjct: 180 NQFGAQEPGTEEDIVSFCSVTYNVTFPLFAKIDVNGENESPVYKYLKSQQPG----DIKW 347

Query: 131 NFTKFLVNKEGKVVERYAPTTSPMKIEKDLEKLLQ 165
           NF KFL++K G VV+RY     P  I  D+E L++
Sbjct: 348 NFEKFLIDKNGNVVKRYTSAAKPEDIASDIENLIK 452


>TC89817 similar to GP|6179604|emb|CAB59895.1 glutathione peroxidase-like
           protein GPX54Hv {Hordeum vulgare}, partial (53%)
          Length = 584

 Score =  120 bits (300), Expect = 3e-28
 Identities = 52/89 (58%), Positives = 68/89 (75%)
 Frame = +2

Query: 76  QEPGTNDEIQDVVCTRFKSEFPVFDKVEVNGKNAEPLFKFLKDQKGGIFGDGIKWNFTKF 135
           QEPG + E +   CTRFK+E+P+F K+ VNG +  PL+KFLK++K G  G  IKWNFTKF
Sbjct: 5   QEPGNSLEAEQFACTRFKAEYPIFGKIRVNGPDTAPLYKFLKEKKSGFLGSRIKWNFTKF 184

Query: 136 LVNKEGKVVERYAPTTSPMKIEKDLEKLL 164
           LV+KEG V++RY+PTTSP  IE D++K L
Sbjct: 185 LVDKEGHVLQRYSPTTSPFSIENDIKKAL 271


>TC82540 similar to PIR|H83292|H83292 probable glutathione peroxidase PA2826
           [imported] - Pseudomonas aeruginosa (strain PAO1),
           partial (62%)
          Length = 678

 Score =  119 bits (298), Expect = 6e-28
 Identities = 54/104 (51%), Positives = 72/104 (68%)
 Frame = +2

Query: 54  LYEKYKSKGLEILAFPCNQFAGQEPGTNDEIQDVVCTRFKSEFPVFDKVEVNGKNAEPLF 113
           LY KY  +GL +L FPCNQF  QEPG  DEI +     +   FP+F+KVEVNG  A P+F
Sbjct: 8   LYTKYAGQGLVVLGFPCNQFGKQEPGGADEISNTCYINYGVSFPMFEKVEVNGGAAHPVF 187

Query: 114 KFLKDQKGGIFGDGIKWNFTKFLVNKEGKVVERYAPTTSPMKIE 157
           +FLK +  G+ G  IKWNFTKFL+ ++G  ++R+AP T+P K+E
Sbjct: 188 RFLKKELPGVLGGRIKWNFTKFLIGRDGIPLKRFAPMTTPEKME 319


>TC77043 similar to PIR|S33618|S33618 glutathione peroxidase (EC 1.11.1.9) -
            sweet orange, partial (57%)
          Length = 1748

 Score = 94.0 bits (232), Expect = 3e-20
 Identities = 41/60 (68%), Positives = 51/60 (84%)
 Frame = +3

Query: 98   VFDKVEVNGKNAEPLFKFLKDQKGGIFGDGIKWNFTKFLVNKEGKVVERYAPTTSPMKIE 157
            VF+ V+VNG  A P++K+LK  KGG+FGDGIKWNF+KFLV+K G VV+RYAPTTSP+ IE
Sbjct: 1014 VFN*VDVNGATAAPIYKYLKSSKGGLFGDGIKWNFSKFLVDKNGNVVDRYAPTTSPLSIE 1193



 Score = 74.3 bits (181), Expect = 2e-14
 Identities = 33/41 (80%), Positives = 37/41 (89%)
 Frame = +1

Query: 62  GLEILAFPCNQFAGQEPGTNDEIQDVVCTRFKSEFPVFDKV 102
           GLEILAFPCNQF  QEPG+ +EIQ+ VCTRFK+EFPVFDKV
Sbjct: 208 GLEILAFPCNQFGAQEPGSVEEIQNFVCTRFKAEFPVFDKV 330


>TC91727 weakly similar to SP|Q9LYB4|GSHZ_ARATH Probable glutathione
           peroxidase At3g63080 (EC 1.11.1.9). [Mouse-ear cress]
           {Arabidopsis thaliana}, partial (57%)
          Length = 1124

 Score = 79.7 bits (195), Expect = 5e-16
 Identities = 35/65 (53%), Positives = 51/65 (77%), Gaps = 1/65 (1%)
 Frame = +3

Query: 102 VEVNGKNAEPLFKFLKDQKGGIFGDG-IKWNFTKFLVNKEGKVVERYAPTTSPMKIEKDL 160
           + VNG++  P++K+LK QK G  G   IKWNFTKFLV++EG+V++RY+PTT P+ IE D+
Sbjct: 624 IRVNGQDTAPVYKYLKSQKCGSLGSRRIKWNFTKFLVDEEGRVIQRYSPTTPPLAIENDI 803

Query: 161 EKLLQ 165
           +K L+
Sbjct: 804 KKALR 818



 Score = 61.2 bits (147), Expect = 2e-10
 Identities = 26/44 (59%), Positives = 32/44 (72%)
 Frame = +1

Query: 62  GLEILAFPCNQFAGQEPGTNDEIQDVVCTRFKSEFPVFDKVEVN 105
           GLEIL FPCNQF  +EPGT+ E QD  C R+K+E+P+  KV  N
Sbjct: 310 GLEILGFPCNQFLRKEPGTSQEAQDFACDRYKAEYPILGKV*YN 441


>TC79043 homologue to GP|6899842|dbj|BAA90524.1 peroxiredoxin Q {Sedum
           lineare}, partial (81%)
          Length = 935

 Score = 32.7 bits (73), Expect = 0.070
 Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
 Frame = +3

Query: 12  FTVKDIRGNDVSLSQYSGKVLII----VNVASQCGLTQTNYKELNILYEKYKSKGLEIL 66
           FT+KD  G  VSLS+Y GK +++     +    C      +++    YEK+K  G E++
Sbjct: 273 FTLKDQDGKTVSLSKYKGKPVVVYFYPADETPGCTKQACAFRD---SYEKFKKAGAEVV 440


>TC82134 similar to PIR|T07949|T07949 calcium binding protein - loblolly
           pine, partial (27%)
          Length = 630

 Score = 26.9 bits (58), Expect = 3.8
 Identities = 12/23 (52%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
 Frame = +1

Query: 126 DGIKWNFTKFLVNKEGKV-VERY 147
           D +KW F KF  NK+GK+ +E Y
Sbjct: 64  DEMKWVFEKFDTNKDGKISLEEY 132


>CB892528 weakly similar to PIR|E96647|E966 hypothetical protein F19K23.5
           [imported] - Arabidopsis thaliana, partial (7%)
          Length = 549

 Score = 26.2 bits (56), Expect = 6.5
 Identities = 13/32 (40%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
 Frame = -1

Query: 134 KFLVNKEGKVVERYAPTTSPMKIEK-DLEKLL 164
           KF +N   KVVE    +TSP+++E+ D+ ++L
Sbjct: 354 KFDINSAWKVVEIAMSSTSPIEVERPDMSQIL 259


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.315    0.135    0.385 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,460,119
Number of Sequences: 36976
Number of extensions: 53051
Number of successful extensions: 183
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 180
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 181
length of query: 167
length of database: 9,014,727
effective HSP length: 89
effective length of query: 78
effective length of database: 5,723,863
effective search space: 446461314
effective search space used: 446461314
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 55 (25.8 bits)


Lotus: description of TM0069.6