BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0069.10
(641 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC79173 similar to GP|14532556|gb|AAK64006.1 AT5g57360/MSF19_2 {... 456 e-128
AW684990 similar to PIR|F96703|F96 unknown protein 35653-33693 ... 279 4e-78
TC91432 homologue to GP|14532556|gb|AAK64006.1 AT5g57360/MSF19_2... 155 1e-43
TC80436 homologue to GP|12040650|gb|AAB41023.2 phototropin-like ... 76 5e-14
TC85929 similar to GP|6466955|gb|AAF13090.1| unknown protein {Ar... 73 3e-13
TC80882 similar to PIR|G86319|G86319 hypothetical protein AAF984... 73 3e-13
TC90984 similar to GP|18146960|dbj|BAB83170. twin LOV protein 1 ... 73 4e-13
BG645672 similar to GP|7596769|gb| unknown protein {Arabidopsis ... 70 2e-12
TC89887 similar to GP|22136502|gb|AAM91329.1 unknown protein {Ar... 66 5e-11
TC80837 similar to GP|20260484|gb|AAM13140.1 unknown protein {Ar... 55 1e-07
BF633214 similar to GP|14495224|db contains EST C72594(E1889)~si... 52 5e-07
TC92501 similar to PIR|S42868|S42868 protein kinase - spinach, p... 50 3e-06
BQ750949 similar to PIR|S69206|S69 regulator protein white colla... 49 8e-06
TC80458 similar to GP|21950739|gb|AAM78582.1 RanGAP1 interacting... 48 1e-05
TC86805 similar to GP|15724206|gb|AAL06496.1 AT5g04420/T32M21_20... 46 4e-05
TC87320 weakly similar to SP|Q92DM1|PHOT_LISIN Blue-light photor... 45 9e-05
BQ139429 homologue to PIR|E86217|E8 protein T27G7.10 [imported] ... 35 0.068
TC90190 similar to GP|3426041|gb|AAC32240.1| unknown protein {Ar... 35 0.068
TC87852 similar to GP|5263329|gb|AAD41431.1| Contains PF|00646 F... 33 0.26
AA660753 weakly similar to GP|21950739|gb RanGAP1 interacting pr... 28 8.3
>TC79173 similar to GP|14532556|gb|AAK64006.1 AT5g57360/MSF19_2 {Arabidopsis
thaliana}, partial (53%)
Length = 1398
Score = 456 bits (1173), Expect = e-128
Identities = 227/350 (64%), Positives = 269/350 (76%), Gaps = 13/350 (3%)
Frame = +1
Query: 71 TTPTSFVVADALEPDFPIIYVNKVFETSTGYRADEALGRNCRFLQYRDPRAQRRHPLVDP 130
T P FVV DAL+PD PIIYVN VFE TGYRA+E LGRNCRFLQ R P A+RRHPLVD
Sbjct: 376 TAPCGFVVTDALDPDHPIIYVNAVFEMLTGYRAEEVLGRNCRFLQCRGPFAKRRHPLVDS 555
Query: 131 VVVAEIRRCLEEGIEFQGELLNFRKDGTPLVNRLRLAPIHDDDGTVTHVIGIQIFSEANI 190
V++EIR+C++EG+EFQGELLNFRKDG+PL+NRLRL PI+ +D +THVIGIQ+F+EANI
Sbjct: 556 SVISEIRKCIDEGVEFQGELLNFRKDGSPLMNRLRLTPIYGEDDEITHVIGIQLFTEANI 735
Query: 191 DLNCVSYPVFRETCNQDLDMAGKYCSQSGQSVYSQHQD-----------MCGILQLSDEV 239
DL P+ T + L +G++ SV S Q +CGI QLSDEV
Sbjct: 736 DLG----PLPGSTIKESLKSSGRF-----HSVLSSLQPPPLGDRNVSRGICGIFQLSDEV 888
Query: 240 LAHNILSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGKEVTGTLELM--TKKLG 297
L+ IL+RLTPRD+AS+ SVC R+ ++T+NE + +MVCQNAWG E T LE + K+LG
Sbjct: 889 LSLKILARLTPRDIASVSSVCTRLYEVTRNEDLWRMVCQNAWGSETTRVLETVPGAKRLG 1068
Query: 298 WGRLTRELTTLEAVSWRKFTVGGAVEPSRCNFSACAAGNRLVLFGGEGVDMQPMADTFVL 357
WGRL RELTTLEA +WRK TVGG VEPSRCNFSACA GNR+VLFGGEGV+MQPM DTFVL
Sbjct: 1069WGRLARELTTLEAAAWRKLTVGGGVEPSRCNFSACAVGNRVVLFGGEGVNMQPMNDTFVL 1248
Query: 358 NLDSKNPEWRRVSVKSSPPGRWGHTLSCLNGSWLVVFGGCGRKGLLNDVF 407
+L+S NPEW+ V V S PPGRWGHTLSC+NGS LVVFGGCG +GLLNDVF
Sbjct: 1249DLNSNNPEWQHVQVSSPPPGRWGHTLSCVNGSRLVVFGGCGTQGLLNDVF 1398
Score = 58.5 bits (140), Expect = 8e-09
Identities = 32/88 (36%), Positives = 52/88 (58%)
Frame = +1
Query: 421 VCGGAPPLPRSWHSSCTIEGSKLVVSGGCTDSGVLLSDTYLLDLAKDNPIWREIPTSWSP 480
V GG P R S+C + G+++V+ GG + ++DT++LDL +NP W+ + S P
Sbjct: 1129 VGGGVEP-SRCNFSACAV-GNRVVLFGGEGVNMQPMNDTFVLDLNSNNPEWQHVQVSSPP 1302
Query: 481 PSRLGHSLSVYGRTKILMFGGLAKSGHL 508
P R GH+LS +++++FGG G L
Sbjct: 1303 PGRWGHTLSCVNGSRLVVFGGCGTQGLL 1386
Score = 54.3 bits (129), Expect = 1e-07
Identities = 46/175 (26%), Positives = 78/175 (44%), Gaps = 1/175 (0%)
Frame = +1
Query: 459 TYLLDLAKDNPIWREI-PTSWSPPSRLGHSLSVYGRTKILMFGGLAKSGHLRLRSGEAYT 517
T L ++ ++ +WR + +W S L K L +G LA+ E T
Sbjct: 952 TRLYEVTRNEDLWRMVCQNAWG--SETTRVLETVPGAKRLGWGRLAR---------ELTT 1098
Query: 518 IDLEDEKPQWRQLDCNEFSGLASQNPDVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQ 577
+ E WR+L + V P R + A ++ R+++FGG + +
Sbjct: 1099 L----EAAAWRKL---------TVGGGVEPSRCNFSACAVG-NRVVLFGGEGVNMQPMND 1236
Query: 578 LFLLDPSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNEL 632
F+LD + P W+ + V PP WGH+ V G+R++V GG G + +LN++
Sbjct: 1237 TFVLDLNSNNPEWQHVQV-SSPPPGRWGHTLSCVNGSRLVVFGG-CGTQGLLNDV 1395
>AW684990 similar to PIR|F96703|F96 unknown protein 35653-33693 [imported] -
Arabidopsis thaliana, partial (23%)
Length = 517
Score = 279 bits (714), Expect(2) = 4e-78
Identities = 133/145 (91%), Positives = 137/145 (93%)
Frame = +3
Query: 382 TLSCLNGSWLVVFGGCGRKGLLNDVFVLDLDAQQPTWTEVCGGAPPLPRSWHSSCTIEGS 441
TLSCLN SWLVVFGGCGR+GLLNDVFVLDLDAQQPTW EV G APPLPRSWHSSCTIEGS
Sbjct: 3 TLSCLNSSWLVVFGGCGRQGLLNDVFVLDLDAQQPTWKEVFGEAPPLPRSWHSSCTIEGS 182
Query: 442 KLVVSGGCTDSGVLLSDTYLLDLAKDNPIWREIPTSWSPPSRLGHSLSVYGRTKILMFGG 501
KLVVSGGCTD+GVLLSDTYLLDL DNP WREIPTSW+PPSRLGHSLSVYGRTKILMFGG
Sbjct: 183 KLVVSGGCTDAGVLLSDTYLLDLTIDNPTWREIPTSWTPPSRLGHSLSVYGRTKILMFGG 362
Query: 502 LAKSGHLRLRSGEAYTIDLEDEKPQ 526
LAKSGHLRLRSGEAYTIDLE E+PQ
Sbjct: 363 LAKSGHLRLRSGEAYTIDLEAEQPQ 437
Score = 82.8 bits (203), Expect = 4e-16
Identities = 52/143 (36%), Positives = 75/143 (52%), Gaps = 4/143 (2%)
Frame = +3
Query: 331 ACAAGNRLVLFGGEGVDMQPMADTFVLNLDSKNPEWRRVSVKSSPPGRWGHTLSCLNGSW 390
+C + LV+FGG G + D FVL+LD++ P W+ V ++ P R H+ + GS
Sbjct: 9 SCLNSSWLVVFGGCG-RQGLLNDVFVLDLDAQQPTWKEVFGEAPPLPRSWHSSCTIEGSK 185
Query: 391 LVVFGGCGRKG-LLNDVFVLDLDAQQPTWTEVCGGAPPLPRSWHSSCTIEGSKLVVSGGC 449
LVV GGC G LL+D ++LDL PTW E+ P R HS +K+++ GG
Sbjct: 186 LVVSGGCTDAGVLLSDTYLLDLTIDNPTWREIPTSWTPPSRLGHSLSVYGRTKILMFGGL 365
Query: 450 TDSGVL---LSDTYLLDLAKDNP 469
SG L + Y +DL + P
Sbjct: 366 AKSGHLRLRSGEAYTIDLEAEQP 434
Score = 62.4 bits (150), Expect = 5e-10
Identities = 33/109 (30%), Positives = 58/109 (52%), Gaps = 4/109 (3%)
Frame = +3
Query: 312 SWRKFTVGGAVEPSRCNFSACAAGNRLVLFGGEGVDMQPMADTFVLNLDSKNPEWRRVSV 371
+W++ P + S G++LV+ GG ++DT++L+L NP WR +
Sbjct: 108 TWKEVFGEAPPLPRSWHSSCTIEGSKLVVSGGCTDAGVLLSDTYLLDLTIDNPTWREIPT 287
Query: 372 KSSPPGRWGHTLSCLNGSWLVVFGGCGRKGLL----NDVFVLDLDAQQP 416
+PP R GH+LS + +++FGG + G L + + +DL+A+QP
Sbjct: 288 SWTPPSRLGHSLSVYGRTKILMFGGLAKSGHLRLRSGEAYTIDLEAEQP 434
Score = 56.6 bits (135), Expect = 3e-08
Identities = 36/136 (26%), Positives = 67/136 (48%), Gaps = 1/136 (0%)
Frame = +3
Query: 487 SLSVYGRTKILMFGGLAKSGHLRLRSGEAYTIDLEDEKPQWRQLDCNEFSGLASQNPDVP 546
+LS + +++FGG + G L + + +DL+ ++P W+++ + P
Sbjct: 3 TLSCLNSSWLVVFGGCGRQGLLN----DVFVLDLDAQQPTWKEVF-----------GEAP 137
Query: 547 P-PRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWG 605
P PR H + ++ ++++ GG S +LLD + + P+WR + PP G
Sbjct: 138 PLPRSWHSSCTIEGSKLVVSGGCTDAGVLLSDTYLLDLTIDNPTWREIPTSWTPPS-RLG 314
Query: 606 HSTCVVGGTRVLVLGG 621
HS V G T++L+ GG
Sbjct: 315 HSLSVYGRTKILMFGG 362
Score = 39.7 bits (91), Expect = 0.004
Identities = 24/80 (30%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Frame = +3
Query: 562 IIIFGG-SIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLG 620
+++FGG GL + +F+LD ++P+W+ + P +W HS+C + G++++V G
Sbjct: 30 LVVFGGCGRQGLLN--DVFVLDLDAQQPTWKEVFGEAPPLPRSW-HSSCTIEGSKLVVSG 200
Query: 621 GHTGEEWVLNELHELCLASD 640
G T +L++ + L L D
Sbjct: 201 GCTDAGVLLSDTYLLDLTID 260
Score = 31.2 bits (69), Expect(2) = 4e-78
Identities = 13/28 (46%), Positives = 18/28 (63%), Gaps = 1/28 (3%)
Frame = +1
Query: 525 PQWRQLDCNEFSG-LASQNPDVPPPRLD 551
P W QL+C F+G + S+ +PPP LD
Sbjct: 433 PNWXQLECTAFTGXIKSKCXSLPPPTLD 516
>TC91432 homologue to GP|14532556|gb|AAK64006.1 AT5g57360/MSF19_2
{Arabidopsis thaliana}, partial (21%)
Length = 755
Score = 155 bits (392), Expect(2) = 1e-43
Identities = 69/94 (73%), Positives = 85/94 (90%)
Frame = +3
Query: 548 PRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHS 607
P L VAVS+P GRI+IFGGS+AGLHS SQL++LDP++EKP+WRILNVPG+PP+FAWGHS
Sbjct: 114 PDLITVAVSLPGGRILIFGGSVAGLHSASQLYILDPTDEKPTWRILNVPGRPPRFAWGHS 293
Query: 608 TCVVGGTRVLVLGGHTGEEWVLNELHELCLASDL 641
TCVVGGTR +VLGG TGEEW+L++LHEL LA+ +
Sbjct: 294 TCVVGGTRAIVLGGQTGEEWMLSDLHELSLANSV 395
Score = 50.1 bits (118), Expect = 3e-06
Identities = 25/90 (27%), Positives = 45/90 (49%), Gaps = 2/90 (2%)
Frame = +3
Query: 324 PSRCNFSACAAGNRLVLFGGEGVDMQPMADTFVLNLDSKNPEWRRVSVKSSPPG-RWGHT 382
P + G R+++FGG + + ++L+ + P WR ++V PP WGH+
Sbjct: 114 PDLITVAVSLPGGRILIFGGSVAGLHSASQLYILDPTDEKPTWRILNVPGRPPRFAWGHS 293
Query: 383 LSCLNGSWLVVFGG-CGRKGLLNDVFVLDL 411
+ G+ +V GG G + +L+D+ L L
Sbjct: 294 TCVVGGTRAIVLGGQTGEEWMLSDLHELSL 383
Score = 45.4 bits (106), Expect = 7e-05
Identities = 29/83 (34%), Positives = 46/83 (54%), Gaps = 3/83 (3%)
Frame = +3
Query: 386 LNGSWLVVFGGCGRKGL--LNDVFVLDLDAQQPTWTEV-CGGAPPLPRSWHSSCTIEGSK 442
L G +++FGG GL + +++LD ++PTW + G PP HS+C + G++
Sbjct: 141 LPGGRILIFGG-SVAGLHSASQLYILDPTDEKPTWRILNVPGRPPRFAWGHSTCVVGGTR 317
Query: 443 LVVSGGCTDSGVLLSDTYLLDLA 465
+V GG T +LSD + L LA
Sbjct: 318 AIVLGGQTGEEWMLSDLHELSLA 386
Score = 39.7 bits (91), Expect(2) = 1e-43
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = +2
Query: 511 RSGEAYTIDLEDEKPQWRQLDCNEFSGLASQNPDVPPPRLDH 552
RS + +T+DL +++P WR + + G + PPPRLDH
Sbjct: 2 RSSDVFTMDLSEDEPCWRCVTGSGMPGAGNPEGIAPPPRLDH 127
Score = 39.3 bits (90), Expect(2) = 1e-05
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +3
Query: 437 TIEGSKLVVSGGCTDSGVLLSDTYLLDLAKDNPIWREIPTSWSPPS-RLGHSLSVYGRTK 495
++ G ++++ GG S Y+LD + P WR + PP GHS V G T+
Sbjct: 138 SLPGGRILIFGGSVAGLHSASQLYILDPTDEKPTWRILNVPGRPPRFAWGHSTCVVGGTR 317
Query: 496 ILMFGG 501
++ GG
Sbjct: 318 AIVLGG 335
Score = 29.6 bits (65), Expect = 3.7
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 10/40 (25%)
Frame = +2
Query: 457 SDTYLLDLAKDNPIWREI----------PTSWSPPSRLGH 486
SD + +DL++D P WR + P +PP RL H
Sbjct: 8 SDVFTMDLSEDEPCWRCVTGSGMPGAGNPEGIAPPPRLDH 127
Score = 28.1 bits (61), Expect(2) = 1e-05
Identities = 15/43 (34%), Positives = 18/43 (40%), Gaps = 10/43 (23%)
Frame = +2
Query: 404 NDVFVLDLDAQQPTWTEVCG----------GAPPLPRSWHSSC 436
+DVF +DL +P W V G G P PR H C
Sbjct: 8 SDVFTMDLSEDEPCWRCVTGSGMPGAGNPEGIAPPPRLDHXGC 136
>TC80436 homologue to GP|12040650|gb|AAB41023.2 phototropin-like protein
PsPK4 {Pisum sativum}, partial (30%)
Length = 910
Score = 75.9 bits (185), Expect = 5e-14
Identities = 43/130 (33%), Positives = 64/130 (49%), Gaps = 2/130 (1%)
Frame = +3
Query: 75 SFVVADALEPDFPIIYVNKVFETSTGYRADEALGRNCRFLQYRDPRAQRRHPLVDPVVVA 134
+FV+ D PD PII+ + F T Y +E LGRNCRFLQ P DP V
Sbjct: 84 NFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQ---------GPETDPATVR 236
Query: 135 EIRRCLEEGIEFQGELLNFRKDGTPLVNRLRLAPIHDDDGTVTHVIGIQIFSEANID--L 192
+IR ++ E +L+N+ + G N L P+ D G V + IG+Q+ +++
Sbjct: 237 KIREAIDNQTEVTVQLINYTRTGKKFWNLFHLQPMRDHKGEVQYFIGVQLDGSQHVEPLH 416
Query: 193 NCVSYPVFRE 202
NC+ +E
Sbjct: 417 NCIKEDTAKE 446
>TC85929 similar to GP|6466955|gb|AAF13090.1| unknown protein {Arabidopsis
thaliana}, partial (95%)
Length = 1534
Score = 73.2 bits (178), Expect = 3e-13
Identities = 71/253 (28%), Positives = 114/253 (44%), Gaps = 11/253 (4%)
Frame = +1
Query: 308 LEAVSWRKFTVGGAVEPSRCNFSACAAGNRLVLFGGEGVDMQPMADTFVLNLDSKNPEWR 367
L+ ++W V G P R + A G + +FGG + + + + + D+K W
Sbjct: 301 LDTLAWSVADVSGNTPPPRVGVTMAAVGETIYVFGGRDAEHNELNELY--SFDTKTNNWA 474
Query: 368 RVSVKS-SPPGRWGHTLSCLNGSWLVVFGGCGRKGLLNDVFVLDLD----AQQPTWTEVC 422
+S PP R H+++ + + + VFGGCG G LND++ D+ A+ P+ E C
Sbjct: 475 LISSGDIGPPNRSYHSMTADDRN-VYVFGGCGVAGRLNDLWAFDVVDGKWAELPSPGESC 651
Query: 423 GGAPPLPRSWHSSCTIEGSKLVVSGGCTDSGVLLSDTYLLDLAKDNPIWREIPTS-WSPP 481
G R +G VV G +G+ + D + +LA+ W ++ TS P
Sbjct: 652 KG-----RGGPGLTVAQGKIWVVYG---FAGMEVDDVHFFNLAQKT--WAQVETSGLKPT 801
Query: 482 SRLGHSLSVYGRTKILMFGG---LAKSGHLRLR--SGEAYTIDLEDEKPQWRQLDCNEFS 536
+R S + G+ I+++GG + GH+ SGE Y +D E W +LD S
Sbjct: 802 ARSVFSTCLIGK-HIIVYGGEIDPSDQGHMGAGQFSGELYALD--TETLSWTRLDDKVDS 972
Query: 537 GLASQNPDVPPPR 549
G D P PR
Sbjct: 973 G------DHPGPR 993
>TC80882 similar to PIR|G86319|G86319 hypothetical protein AAF98413.1
[imported] - Arabidopsis thaliana, partial (44%)
Length = 1075
Score = 73.2 bits (178), Expect = 3e-13
Identities = 57/152 (37%), Positives = 79/152 (51%), Gaps = 6/152 (3%)
Frame = +3
Query: 375 PPGRWGHTLSCLNGS-WLVVFGGCGRKGL-LNDVFVLDLDAQQPTWTE-VCGGAPPLPRS 431
P RWGHT + +NG + VFGG G+ N V + D Q TW++ G PP PR
Sbjct: 246 PGKRWGHTCNSINGGRHIYVFGGYGKDNCQTNQVHIFDTVNQ--TWSQPAIKGTPPTPRD 419
Query: 432 WHSSCTIEGSKLVVSGGCTDSGVLLSDTYLLDLAK---DNPIWREIPTSWSPPSRLGHSL 488
H +C++ G +L V GG TD L D ++LD + D+PI R P +R GHS
Sbjct: 420 SH-TCSVVGHRLFVFGG-TDGTNPLKDLHILDTSLQTWDSPIIR----GEGPEAREGHSA 581
Query: 489 SVYGRTKILMFGGLAKSGHLRLRSGEAYTIDL 520
+V G+ ++ +FGG KS + E Y DL
Sbjct: 582 AVVGK-RLYIFGGCGKSAD---NNNEVYYNDL 665
Score = 51.6 bits (122), Expect = 9e-07
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 10/155 (6%)
Frame = +3
Query: 312 SWRKFTVGGAVEPSRCNFSACAAGNRLVLFGGEGVDMQPMADTFVLNLDSKNPEWRRVSV 371
+W + + G R + + G+RL +FGG P+ D +L D+ W +
Sbjct: 372 TWSQPAIKGTPPTPRDSHTCSVVGHRLFVFGGTD-GTNPLKDLHIL--DTSLQTWDSPII 542
Query: 372 KSS-PPGRWGHTLSCLNGSWLVVFGGCGRKG------LLNDVFVLDLDA---QQPTWTEV 421
+ P R GH+ + + G L +FGGCG+ ND+++L+ + +PT
Sbjct: 543 RGEGPEAREGHSAAVV-GKRLYIFGGCGKSADNNNEVYYNDLYILNTETLVWMRPT---- 707
Query: 422 CGGAPPLPRSWHSSCTIEGSKLVVSGGCTDSGVLL 456
G PP PR H SC+ ++++ G +++
Sbjct: 708 TSGTPPSPRDSH-SCSTWKNRIICDRGVKTGMIII 809
Score = 39.7 bits (91), Expect = 0.004
Identities = 39/143 (27%), Positives = 61/143 (42%), Gaps = 1/143 (0%)
Frame = +3
Query: 480 PPSRLGHSL-SVYGRTKILMFGGLAKSGHLRLRSGEAYTIDLEDEKPQWRQLDCNEFSGL 538
P R GH+ S+ G I +FGG K ++ + + D ++ W Q
Sbjct: 246 PGKRWGHTCNSINGGRHIYVFGGYGKDN---CQTNQVHIFDTVNQT--WSQPAIK----- 395
Query: 539 ASQNPDVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQ 598
PP D S+ R+ +FGG+ G + L +LD S + +W + G+
Sbjct: 396 -----GTPPTPRDSHTCSVVGHRLFVFGGT-DGTNPLKDLHILDTSLQ--TWDSPIIRGE 551
Query: 599 PPKFAWGHSTCVVGGTRVLVLGG 621
P+ GHS VV G R+ + GG
Sbjct: 552 GPEAREGHSAAVV-GKRLYIFGG 617
Score = 33.1 bits (74), Expect = 0.34
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Frame = +2
Query: 342 GGEGVDMQPMADTFVLNLDSKNPEWRRVSVKSSP-PGRWGHTLSCLNGSWLVVFGG-CGR 399
GGE ++D + + D+ N WR +S P R GH+ G L VFGG
Sbjct: 782 GGEDGHDYYLSDLHIFDTDTLN--WRELSTSGQLLPPRAGHSTVSF-GKNLFVFGGFTDA 952
Query: 400 KGLLNDVFVLDLD 412
+ L ND++ LD+D
Sbjct: 953 QNLYNDLYTLDVD 991
Score = 32.3 bits (72), Expect = 0.58
Identities = 16/63 (25%), Positives = 30/63 (47%)
Frame = +2
Query: 309 EAVSWRKFTVGGAVEPSRCNFSACAAGNRLVLFGGEGVDMQPMADTFVLNLDSKNPEWRR 368
+ ++WR+ + G + P R S + G L +FGG D + L++D+ WR
Sbjct: 836 DTLNWRELSTSGQLLPPRAGHSTVSFGKNLFVFGGFTDAQNLYNDLYTLDVDT--GIWRN 1009
Query: 369 VSV 371
+ +
Sbjct: 1010IQL 1018
>TC90984 similar to GP|18146960|dbj|BAB83170. twin LOV protein 1
{Arabidopsis thaliana}, partial (29%)
Length = 737
Score = 72.8 bits (177), Expect = 4e-13
Identities = 43/121 (35%), Positives = 60/121 (49%)
Frame = +2
Query: 64 PGLFFYPTTPTSFVVADALEPDFPIIYVNKVFETSTGYRADEALGRNCRFLQYRDPRAQR 123
P LF + SFV+ PD PI+Y + F TGY DE LGRNCRFL R+
Sbjct: 17 P*LFLLVESNKSFVLTIPHLPDMPIVYASDAFMKLTGYTRDEVLGRNCRFLGGRN----- 181
Query: 124 RHPLVDPVVVAEIRRCLEEGIEFQGELLNFRKDGTPLVNRLRLAPIHDDDGTVTHVIGIQ 183
D + IR ++ +LN+RKD + N L ++P+ D G V + +G+Q
Sbjct: 182 ----TDDSALQLIRESIKTEKLCTVRILNYRKDKSSFWNLLHISPVRDATGKVAYFVGVQ 349
Query: 184 I 184
I
Sbjct: 350 I 352
>BG645672 similar to GP|7596769|gb| unknown protein {Arabidopsis thaliana},
partial (32%)
Length = 771
Score = 70.1 bits (170), Expect = 2e-12
Identities = 65/208 (31%), Positives = 93/208 (44%), Gaps = 9/208 (4%)
Frame = +3
Query: 308 LEAVSWRKFTVGGAVEPSR-----CNFSACAAGNRLVLFGGEGVDMQPMADTFVLNLDSK 362
L + +W K V E S S A GN+L+ G D P V D +
Sbjct: 24 LRSWTWSKLEVKAGDESSTTLDPCAGHSLIAWGNKLLSIAGHTKD--PSESIQVREFDLQ 197
Query: 363 NPEWRRVSVKSSPP-GRWGHTLSCLNGSWLVVFGGC-GRKGLLNDVFVLDLDAQQPTWTE 420
W + PP R G ++S L G+ LV+FGG ++ LLND+ +LDL+ TW E
Sbjct: 198 RATWSTLKTYGKPPISRGGQSVS-LVGNTLVIFGGQDAKRTLLNDLHILDLETM--TWDE 368
Query: 421 V-CGGAPPLPRSWHSSCTIEGSKLVVSGGCTDSGVLLSDTYLLDLAKDNPIW-REIPTSW 478
+ G PP PRS H++ L++ GG + + +D ++LDL W R
Sbjct: 369 IDAVGVPPSPRSDHTAAVHVDRYLLIFGGGSHA-TCYNDLHVLDL--QTMEWSRPTQQGE 539
Query: 479 SPPSRLGHSLSVYGRTKILMFGGLAKSG 506
P R GH+ G ++ GG KSG
Sbjct: 540 IPTPRAGHAGVTVGENWFIVGGGDNKSG 623
Score = 42.7 bits (99), Expect = 4e-04
Identities = 47/155 (30%), Positives = 66/155 (42%), Gaps = 4/155 (2%)
Frame = +3
Query: 471 WREIPTSWSPP-SRLGHSLSVYGRTKILMFGGLAKSGHLRLRSGEAYTIDLEDEKPQWRQ 529
W + T PP SR G S+S+ G T ++ G AK R + + +DLE W +
Sbjct: 207 WSTLKTYGKPPISRGGQSVSLVGNTLVIFGGQDAK----RTLLNDLHILDLETMT--WDE 368
Query: 530 LDCNEFSGLASQNPDVPP-PRLDHVAVSMPCGRIIIFGGSIAGLHSP--SQLFLLDPSEE 586
+D VPP PR DH A ++IFGG G H+ + L +LD +
Sbjct: 369 IDA----------VGVPPSPRSDHTAAVHVDRYLLIFGG---GSHATCYNDLHVLD--LQ 503
Query: 587 KPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGG 621
W G+ P GH+ VG +V GG
Sbjct: 504 TMEWSRPTQQGEIPTPRAGHAGVTVGENWFIVGGG 608
>TC89887 similar to GP|22136502|gb|AAM91329.1 unknown protein {Arabidopsis
thaliana}, partial (42%)
Length = 1243
Score = 65.9 bits (159), Expect = 5e-11
Identities = 52/189 (27%), Positives = 89/189 (46%), Gaps = 11/189 (5%)
Frame = +2
Query: 310 AVSWRKFTVGGAVEPSRCNFSACAAGNRLVLFGGEGVDMQPMADTFVL----NLDSKNPE 365
++ W + +V + RC +A RL+++GG G M D + L +++ P
Sbjct: 35 SLEWTELSVSATLPQPRCGHTATMVEKRLLVYGGRGGGGPIMGDLWALKGLIEEENETPG 214
Query: 366 WRRVSVKSSPPG-RWGHTLSCLNGSWLVVFGGCGRKGLLN--DVFVLD---LDAQQPTWT 419
W ++ + P R GH+++ G +L++FGG G G L+ D++ D LD TW
Sbjct: 215 WTQLKLPGQAPSPRCGHSVTNA-GHYLLMFGGHGTGGWLSRYDIYYNDCVVLDRVSATWK 391
Query: 420 EV-CGGAPPLPRSWHSSCTIEGSKLVVSGGCTDSGVLLSDTYLLDLAKDNPIWREIPTSW 478
+ G PP R++HS I GS+ ++ GG +L + +D+PI +
Sbjct: 392 RLSVGNEPPPARAYHSMTAI-GSRYLLIGGFDGKSTYGEPWWL--VPQDDPIANRLTA-- 556
Query: 479 SPPSRLGHS 487
SPP + S
Sbjct: 557 SPPRNISES 583
Score = 53.5 bits (127), Expect = 2e-07
Identities = 51/163 (31%), Positives = 85/163 (51%), Gaps = 12/163 (7%)
Frame = +2
Query: 351 MADTFVLNLDSKNPEWRRVSVKSS-PPGRWGHTLSCLNGSWLVVFGGCGRKG-LLNDVFV 408
++D +VL D+ + EW +SV ++ P R GHT + + L+V+GG G G ++ D++
Sbjct: 5 LSDVYVL--DTISLEWTELSVSATLPQPRCGHTATMVEKR-LLVYGGRGGGGPIMGDLWA 175
Query: 409 L----DLDAQQPTWTEV-CGGAPPLPRSWHSSCTIEGSKLVVSGGCTDSGVLLS-DTYLL 462
L + + + P WT++ G P PR HS T G L++ GG G L D Y
Sbjct: 176 LKGLIEEENETPGWTQLKLPGQAPSPRCGHS-VTNAGHYLLMFGGHGTGGWLSRYDIYYN 352
Query: 463 D---LAKDNPIWREIPT-SWSPPSRLGHSLSVYGRTKILMFGG 501
D L + + W+ + + PP+R HS++ G ++ L+ GG
Sbjct: 353 DCVVLDRVSATWKRLSVGNEPPPARAYHSMTAIG-SRYLLIGG 478
Score = 49.3 bits (116), Expect = 5e-06
Identities = 51/179 (28%), Positives = 84/179 (46%), Gaps = 9/179 (5%)
Frame = +2
Query: 456 LSDTYLLDLAKDNPIWREIPTSWS-PPSRLGHSLSVYGRTKILMFGGLAKSGHLRLRSGE 514
LSD Y+LD W E+ S + P R GH+ ++ + ++L++GG G + G+
Sbjct: 5 LSDVYVLDTISLE--WTELSVSATLPQPRCGHTATMVEK-RLLVYGGRGGGGPIM---GD 166
Query: 515 AYT----IDLEDEKPQWRQLDCNEFSGLASQNPDVPPPRLDHVAVSMPCGRIIIFGG-SI 569
+ I+ E+E P W QL + G A P PR H +V+ +++FGG
Sbjct: 167 LWALKGLIEEENETPGWTQL---KLPGQA------PSPRCGH-SVTNAGHYLLMFGGHGT 316
Query: 570 AGLHSPSQLFLLDP---SEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGE 625
G S ++ D +W+ L+V +PP HS + G+R L++GG G+
Sbjct: 317 GGWLSRYDIYYNDCVVLDRVSATWKRLSVGNEPPPARAYHSMTAI-GSRYLLIGGFDGK 490
Score = 45.4 bits (106), Expect = 7e-05
Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 4/93 (4%)
Frame = +2
Query: 540 SQNPDVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLF----LLDPSEEKPSWRILNV 595
S + +P PR H A +M R++++GG G L+ L++ E P W L +
Sbjct: 56 SVSATLPQPRCGHTA-TMVEKRLLVYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKL 232
Query: 596 PGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWV 628
PGQ P GHS G +L+ GGH W+
Sbjct: 233 PGQAPSPRCGHSV-TNAGHYLLMFGGHGTGGWL 328
Score = 44.3 bits (103), Expect = 1e-04
Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 5/96 (5%)
Frame = +2
Query: 309 EAVSWRKFTVGGAVEPSRCNFSACAAGNRLVLFGGEGVDMQPMADTFVLN----LDSKNP 364
E W + + G RC S AG+ L++FGG G N LD +
Sbjct: 203 ETPGWTQLKLPGQAPSPRCGHSVTNAGHYLLMFGGHGTGGWLSRYDIYYNDCVVLDRVSA 382
Query: 365 EWRRVSV-KSSPPGRWGHTLSCLNGSWLVVFGGCGR 399
W+R+SV PP R H+++ + +L++ G G+
Sbjct: 383 TWKRLSVGNEPPPARAYHSMTAIGSRYLLIGGFDGK 490
>TC80837 similar to GP|20260484|gb|AAM13140.1 unknown protein {Arabidopsis
thaliana}, partial (13%)
Length = 822
Score = 54.7 bits (130), Expect = 1e-07
Identities = 24/45 (53%), Positives = 32/45 (70%)
Frame = +3
Query: 71 TTPTSFVVADALEPDFPIIYVNKVFETSTGYRADEALGRNCRFLQ 115
T +FVV+DA +PD PI+Y + F + TGY + E +GRNCRFLQ
Sbjct: 651 TLQQTFVVSDATKPDCPILYASSGFFSMTGYSSKEVIGRNCRFLQ 785
>BF633214 similar to GP|14495224|db contains EST C72594(E1889)~similar to
Arabidopsis thaliana chromosome 1 F25I16.5~unknown
protein, partial (16%)
Length = 502
Score = 52.4 bits (124), Expect = 5e-07
Identities = 49/153 (32%), Positives = 71/153 (46%), Gaps = 4/153 (2%)
Frame = +2
Query: 383 LSCLNGSWLVVFGGCGR--KGLLNDVFVLDLDAQQPTWTEVCGGAPPLPRSWHSSCTIEG 440
L + G LV+FGG G LND+ +LDL + + G P+PR H + I G
Sbjct: 77 LPLVGGERLVIFGGRGEGDANYLNDLHILDLRTMRWSSFPEVKGDLPVPRDSHCTLAI-G 253
Query: 441 SKLVVSGGCTDSG-VLLSDTYLLDLAKDNPIWREIPTSWSPPS-RLGHSLSVYGRTKILM 498
+KL+V GG DSG D LLD+ + W + S P R GH+ G TK+ +
Sbjct: 254 NKLIVYGG--DSGDQYHGDVSLLDM--ETMTWTRLKNQGSSPGVRAGHAAVNVG-TKVYI 418
Query: 499 FGGLAKSGHLRLRSGEAYTIDLEDEKPQWRQLD 531
GG+ + + + +D+ W QLD
Sbjct: 419 IGGVGDKRY----CNDIWVVDIHTW--LWSQLD 499
Score = 48.1 bits (113), Expect = 1e-05
Identities = 33/106 (31%), Positives = 56/106 (52%), Gaps = 2/106 (1%)
Frame = +2
Query: 308 LEAVSWRKFT-VGGAVEPSRCNFSACAAGNRLVLFGGEGVDMQPMADTFVLNLDSKNPEW 366
L + W F V G + R + A GN+L+++GG+ D Q D +L++++ W
Sbjct: 167 LRTMRWSSFPEVKGDLPVPRDSHCTLAIGNKLIVYGGDSGD-QYHGDVSLLDMETMT--W 337
Query: 367 RRVSVKSSPPG-RWGHTLSCLNGSWLVVFGGCGRKGLLNDVFVLDL 411
R+ + S PG R GH + G+ + + GG G K ND++V+D+
Sbjct: 338 TRLKNQGSSPGVRAGHAAVNV-GTKVYIIGGVGDKRYCNDIWVVDI 472
Score = 44.7 bits (104), Expect = 1e-04
Identities = 39/133 (29%), Positives = 65/133 (48%), Gaps = 3/133 (2%)
Frame = +2
Query: 335 GNRLVLFGGEGV-DMQPMADTFVLNLDSKNPEWRRV-SVKSSPPGRWGHTLSCLNGSWLV 392
G RLV+FGG G D + D +L+L + W VK P + G+ L+
Sbjct: 92 GERLVIFGGRGEGDANYLNDLHILDL--RTMRWSSFPEVKGDLPVPRDSHCTLAIGNKLI 265
Query: 393 VFGGCGRKGLLNDVFVLDLDAQQPTWTEVCG-GAPPLPRSWHSSCTIEGSKLVVSGGCTD 451
V+GG DV +LD++ TWT + G+ P R+ H++ + G+K+ + GG D
Sbjct: 266 VYGGDSGDQYHGDVSLLDMETM--TWTRLKNQGSSPGVRAGHAAVNV-GTKVYIIGGVGD 436
Query: 452 SGVLLSDTYLLDL 464
+D +++D+
Sbjct: 437 KR-YCNDIWVVDI 472
>TC92501 similar to PIR|S42868|S42868 protein kinase - spinach, partial
(23%)
Length = 827
Score = 50.1 bits (118), Expect = 3e-06
Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 3/103 (2%)
Frame = +2
Query: 85 DFPIIYV---NKVFETSTGYRADEALGRNCRFLQYRDPRAQRRHPLVDPVVVAEIRRCLE 141
DF I+ + F + + LGRNCRFLQ P D V IR ++
Sbjct: 449 DFQIVQLYLHQTAFSSLQNIHEKKFLGRNCRFLQ---------GPETDQATVNRIRDAIK 601
Query: 142 EGIEFQGELLNFRKDGTPLVNRLRLAPIHDDDGTVTHVIGIQI 184
+ E +L+N+ K G N L P+ D G + + IG+Q+
Sbjct: 602 DQREITVQLINYTKSGKKFWNLFHLQPMRDQKGELQYFIGVQL 730
Score = 31.2 bits (69), Expect = 1.3
Identities = 31/118 (26%), Positives = 48/118 (40%), Gaps = 13/118 (11%)
Frame = +1
Query: 4 ENKNKNKEDEDELHNHNSTGKRLKCMRKMKKNEEQDQVVDDDDGVVV-----VAGEAEES 58
+N N ++ E N+ S+ K K K + V D D +V + E E S
Sbjct: 175 DNNNMSRFSSYEERNNKSSRKSGITSLKGVKGKSMSSVGRDKDKTIVEPEVLMTKEIEWS 354
Query: 59 -----ELPLQPGLFFYPTTPT---SFVVADALEPDFPIIYVNKVFETSTGYRADEALG 108
E ++ G+ T +FV++D PD PII+ + F T Y +E G
Sbjct: 355 KYELRERDIRQGIDLATTLERIEKNFVISDPRLPDCPIIFASDSFLELTEYTREEIFG 528
>BQ750949 similar to PIR|S69206|S69 regulator protein white collar 1 -
Neurospora crassa, partial (7%)
Length = 276
Score = 48.5 bits (114), Expect = 8e-06
Identities = 23/48 (47%), Positives = 30/48 (61%)
Frame = +1
Query: 75 SFVVADALEPDFPIIYVNKVFETSTGYRADEALGRNCRFLQYRDPRAQ 122
+FVV D D PIIYV+ F+ TGY E +G+NCRFLQ D + +
Sbjct: 85 AFVVCDVSLNDCPIIYVSDNFQNLTGYSRHEIVGQNCRFLQAPDAKVE 228
>TC80458 similar to GP|21950739|gb|AAM78582.1 RanGAP1 interacting protein
{Arabidopsis thaliana}, partial (50%)
Length = 1536
Score = 47.8 bits (112), Expect = 1e-05
Identities = 50/181 (27%), Positives = 82/181 (44%), Gaps = 10/181 (5%)
Frame = +1
Query: 334 AGNRLVLFGGEGVDMQPMADTFVLNLDSKNPEWRRVSVKSSPPG-RWGHTLSCLNGSWLV 392
A + L+LFGGE + + D + +L K+ W + + P R H + + L
Sbjct: 7 ASSYLILFGGEDAKRRKLNDLHMFDL--KSLTWLPLHYTGTAPSPRLNHVAALYDDKVLY 180
Query: 393 VFGGCGRKGLLNDVFVLDLDAQQPTWTEV-CGGAPPLPRSWHSSC-TIEGSKLVVSGGCT 450
+FGG + LND++ LD + W+ V G P PR+ C + G+K ++GG +
Sbjct: 181 IFGGSSKSKTLNDLYSLDFETM--AWSRVKVRGFHPSPRA--GCCGVLCGTKWYITGGGS 348
Query: 451 DSGVLLSDTYLLDLAKDNPIWREIPTSWSPPSRL----GHSLSVY---GRTKILMFGGLA 503
+T + D+ K+ W T SPPS + G SL + + ++ FGG
Sbjct: 349 KK-KRHGETLIFDIVKNE--WSVAIT--SPPSSITTNKGFSLVLVQYKEKDYLVAFGGSK 513
Query: 504 K 504
K
Sbjct: 514 K 516
Score = 28.9 bits (63), Expect = 6.4
Identities = 26/76 (34%), Positives = 37/76 (48%)
Frame = +1
Query: 546 PPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWG 605
P PRL+HVA + IFGGS + + + L+ LD E +W + V G P G
Sbjct: 127 PSPRLNHVAALYDDKVLYIFGGS-SKSKTLNDLYSLD--FETMAWSRVKVRGFHPSPRAG 297
Query: 606 HSTCVVGGTRVLVLGG 621
V+ GT+ + GG
Sbjct: 298 -CCGVLCGTKWYITGG 342
>TC86805 similar to GP|15724206|gb|AAL06496.1 AT5g04420/T32M21_20
{Arabidopsis thaliana}, partial (52%)
Length = 1055
Score = 46.2 bits (108), Expect = 4e-05
Identities = 28/97 (28%), Positives = 47/97 (47%), Gaps = 1/97 (1%)
Frame = +1
Query: 301 LTRELTTLEAVSWRKFTVGGAVEPSRCNFSACAAGNRLVLFGGEGVDMQPMADTFVLNLD 360
LT + +E + G+V +R SA G+R++LFGGE + + D VL+L+
Sbjct: 535 LTVQYIDIETCQFGVIKTSGSVPVARVGQSATLVGSRVILFGGEDRRRKLLNDVHVLDLE 714
Query: 361 SKNPEWRRVSVKSSPPG-RWGHTLSCLNGSWLVVFGG 396
S W + +PP R+ H + +L++F G
Sbjct: 715 SMT--WDMIKTSQTPPAPRYDHAAAMHGERYLMIFRG 819
Score = 41.2 bits (95), Expect = 0.001
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
Frame = +1
Query: 335 GNRLVLFGGEGVDMQPMADTFVLN-LDSKNPEWRRVSVKSSPPGRWGHTLSCLNGSWLVV 393
G +L++ GG D +DT + +D + ++ + S P + L GS +++
Sbjct: 484 GEKLLILGGSSRDT---SDTLTVQYIDIETCQFGVIKTSGSVPVARVGQSATLVGSRVIL 654
Query: 394 FGGCGRKG-LLNDVFVLDLDAQQPTWTEV-CGGAPPLPRSWHSS 435
FGG R+ LLNDV VLDL++ TW + PP PR H++
Sbjct: 655 FGGEDRRRKLLNDVHVLDLESM--TWDMIKTSQTPPAPRYDHAA 780
Score = 40.0 bits (92), Expect = 0.003
Identities = 26/85 (30%), Positives = 42/85 (48%), Gaps = 1/85 (1%)
Frame = +2
Query: 383 LSCLNGSWLVVFGGCGRKGLLNDVFVLDLDAQQPTWTE-VCGGAPPLPRSWHSSCTIEGS 441
L C+ L GGC ND+ +LDL + W++ G PR+ H+ TI+ S
Sbjct: 779 LLCMENGTL*FSGGCSHSVFFNDLHLLDLQTME--WSQPQSQGDLVSPRAGHAGITIDES 952
Query: 442 KLVVSGGCTDSGVLLSDTYLLDLAK 466
+V GG +G +T +L+++K
Sbjct: 953 WFIVGGGDNXNG--CPETLVLNMSK 1021
>TC87320 weakly similar to SP|Q92DM1|PHOT_LISIN Blue-light photoreceptor
(Phototropin homolog). {Listeria innocua}, partial (11%)
Length = 1006
Score = 45.1 bits (105), Expect = 9e-05
Identities = 34/104 (32%), Positives = 47/104 (44%), Gaps = 1/104 (0%)
Frame = +2
Query: 76 FVVADALEPDFPIIYVNKVFETSTGYRADEALGRNCRFLQYRDPRAQRRHPLVDPVVVAE 135
F + D + PII+ + F TG+ DE LGR+ Q RR V E
Sbjct: 458 FTITDPSLSNHPIIFASHAFLNITGFTRDEVLGRSGSMFQ--GSATCRRS-------VME 610
Query: 136 IRRCLEEGIEFQGELLNFRKDGTPLVNRLRLAPIH-DDDGTVTH 178
IR + E E L+N+RK+GTP L ++P+ G V H
Sbjct: 611 IREAVREERETNVVLVNYRKNGTPFWVFLTVSPVFCVKSGAVVH 742
>BQ139429 homologue to PIR|E86217|E8 protein T27G7.10 [imported] -
Arabidopsis thaliana, partial (13%)
Length = 531
Score = 35.4 bits (80), Expect = 0.068
Identities = 31/127 (24%), Positives = 55/127 (42%), Gaps = 2/127 (1%)
Frame = +1
Query: 335 GNRLVLFGGEGVDMQPMADTFVLNLDSKNPEWRRVSVK-SSPPGRWGHTLSCLNGSWLVV 393
G R ++ G +P+AD + L+ +K EWR++ + PP T S + L++
Sbjct: 13 GQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLL 192
Query: 394 FGGCGRKGL-LNDVFVLDLDAQQPTWTEVCGGAPPLPRSWHSSCTIEGSKLVVSGGCTDS 452
GG + L + L + G P R H++ + ++L VSGG
Sbjct: 193 CGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSSRYQHAAVFV-NARLHVSGGALGG 369
Query: 453 GVLLSDT 459
G ++ D+
Sbjct: 370 GRMVEDS 390
>TC90190 similar to GP|3426041|gb|AAC32240.1| unknown protein {Arabidopsis
thaliana}, partial (60%)
Length = 1626
Score = 35.4 bits (80), Expect = 0.068
Identities = 17/76 (22%), Positives = 39/76 (50%)
Frame = +2
Query: 208 LDMAGKYCSQSGQSVYSQHQDMCGILQLSDEVLAHNILSRLTPRDVASIGSVCRRIRQLT 267
+ + K C S + ++ +L L D L IL +L+P ++ ++ VC+ +R+
Sbjct: 470 MQLQNKSCLVSKVEYREEEEEKASLLDLHDLPL-DCILEKLSPSELCNVAQVCKSLREKC 646
Query: 268 KNEHVRKMVCQNAWGK 283
+++++ + + WGK
Sbjct: 647 RSDYLWEKHMKMKWGK 694
>TC87852 similar to GP|5263329|gb|AAD41431.1| Contains PF|00646 F-box
domain. ESTs gb|Z37267 gb|R90412 gb|Z37268 and
gb|T88189 come from this, partial (97%)
Length = 1470
Score = 33.5 bits (75), Expect = 0.26
Identities = 26/107 (24%), Positives = 47/107 (43%), Gaps = 3/107 (2%)
Frame = +2
Query: 187 EANIDLNCVSYPVFRETCNQDLDMAG---KYCSQSGQSVYSQHQDMCGILQLSDEVLAHN 243
E+ + L V+Y V R LD+ G + + G + H D + + + L
Sbjct: 212 ESVLRLKTVNYFVTRRPW---LDLYGVNVRPVAPFGSASRKPHVDSSLLHRCLPDELLFE 382
Query: 244 ILSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGKEVTGTLE 290
+ +R+TP D+ VCR+ R +N + C W +++G +E
Sbjct: 383 VFARMTPYDMGKASCVCRKWRYTIRNPAFWRNACLKGW--QLSGAVE 517
>AA660753 weakly similar to GP|21950739|gb RanGAP1 interacting protein
{Arabidopsis thaliana}, partial (14%)
Length = 501
Score = 28.5 bits (62), Expect = 8.3
Identities = 16/56 (28%), Positives = 26/56 (45%)
Frame = +3
Query: 366 WRRVSVKSSPPGRWGHTLSCLNGSWLVVFGGCGRKGLLNDVFVLDLDAQQPTWTEV 421
W +S+ P + +C+ + ++V GG GL V VL+ D +WT V
Sbjct: 312 WMVLSIAGDKPTPXSYHAACVXENKMIVVGGESGNGLXXXVXVLNFDTF--SWTTV 473
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.319 0.137 0.430
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,073,832
Number of Sequences: 36976
Number of extensions: 360308
Number of successful extensions: 1741
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 1661
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1711
length of query: 641
length of database: 9,014,727
effective HSP length: 102
effective length of query: 539
effective length of database: 5,243,175
effective search space: 2826071325
effective search space used: 2826071325
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)
Lotus: description of TM0069.10