BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0069.1
(367 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC80427 similar to SP|Q9S7U5|HSF5_ARATH Heat shock factor protei... 255 2e-68
TC90005 similar to SP|P41153|HSF8_LYCPE Heat shock factor protei... 216 9e-57
TC81396 similar to PIR|T06535|T06535 heat shock transcription fa... 167 8e-42
TC79769 homologue to GP|7158882|gb|AAF37579.1| heat shock transc... 164 7e-41
TC79192 similar to GP|14517387|gb|AAK62584.1 AT4g13980/dl3030c {... 162 2e-40
BE319312 similar to GP|9279701|dbj heat shock transcription fact... 148 3e-36
TC86176 similar to PIR|S59538|S59538 heat shock transcription fa... 131 5e-31
TC86533 similar to PIR|T00825|T00825 probable heat shock transcr... 121 4e-28
TC90720 similar to PIR|C96511|C96511 probable heat shock transcr... 119 1e-27
TC89188 similar to PIR|S59541|S59541 heat shock transcription fa... 118 3e-27
TC81889 similar to SP|Q9T0D3|HSF7_ARATH Heat shock factor protei... 92 2e-22
AW736595 similar to PIR|T48399|T483 heat shock transcription fac... 72 9e-15
AW697097 similar to PIR|T48399|T483 heat shock transcription fac... 72 3e-13
BF004353 similar to SP|P22335|HSF2_ Heat shock factor protein HS... 61 6e-10
TC89305 similar to GP|9279701|dbj|BAB01258.1 heat shock transcri... 57 1e-08
TC92588 weakly similar to SP|P41152|HSF3_LYCPE Heat shock factor... 48 5e-06
BF649848 weakly similar to GP|14517387|gb| AT4g13980/dl3030c {Ar... 43 2e-04
BQ135539 similar to GP|9279701|dbj| heat shock transcription fac... 30 0.20
TC93663 similar to PIR|T51945|T51945 heat shock transcription fa... 33 0.23
TC77364 similar to GP|20160852|dbj|BAB89791. contains EST AU0557... 29 3.3
>TC80427 similar to SP|Q9S7U5|HSF5_ARATH Heat shock factor protein 5 (HSF 5)
(Heat shock transcription factor 5) (HSTF 5). [Mouse-ear
cress], partial (27%)
Length = 642
Score = 255 bits (652), Expect = 2e-68
Identities = 123/166 (74%), Positives = 141/166 (84%), Gaps = 1/166 (0%)
Frame = +2
Query: 7 NASGSSSVAPFLNKCYDMVEDDSTDSIISWTEPSGHTFVISDITAFSVTLLPTYFKHNNF 66
+ SGS SVAPFLNKCYDMVED STDSIISW+ S ++F+IS+ FS+TLLP YFKHNNF
Sbjct: 143 SGSGSGSVAPFLNKCYDMVEDPSTDSIISWSADSNNSFIISNADQFSLTLLPNYFKHNNF 322
Query: 67 ASFIRQLNIYGFRKVDTDRWEFANENFVRGQKHLLKNIRRRKHPHV-TDQQKALPEHNNS 125
+SF+RQLNIYGFRK+D D WEFANENF+RGQKHLLKNIRRRKHPHV DQQK LP +N
Sbjct: 323 SSFVRQLNIYGFRKIDADHWEFANENFIRGQKHLLKNIRRRKHPHVAADQQKPLPPKDNR 502
Query: 126 DEPSREAPNHGLRKEVENLKSDRNSLMQELVHLSQHLESAESKMLV 171
DEPS+EA NHGL +EVENLKSDR +L QELV QHLES+ESK+L+
Sbjct: 503 DEPSQEAVNHGLWREVENLKSDRKTLTQELVKHKQHLESSESKLLL 640
>TC90005 similar to SP|P41153|HSF8_LYCPE Heat shock factor protein HSF8
(Heat shock transcription factor 8) (HSTF 8), partial
(44%)
Length = 931
Score = 216 bits (551), Expect = 9e-57
Identities = 117/234 (50%), Positives = 151/234 (64%), Gaps = 8/234 (3%)
Frame = +3
Query: 16 PFLNKCYDMVEDDSTDSIISWTEPSGHTFVISDITAFSVTLLPTYFKHNNFASFIRQLNI 75
PFL+K YDMV+D STD+I+SW+ + ++FV+ D F+ LLP +FKHNNF+SF+RQLN
Sbjct: 222 PFLSKTYDMVDDPSTDAIVSWSA-TNNSFVVWDPPEFARDLLPKFFKHNNFSSFVRQLNT 398
Query: 76 YGFRKVDTDRWEFANENFVRGQKHLLKNIRRRKHPHVTDQQKALPEHNNSDEPSR--EAP 133
YGFRKVD DRWEFANE F+RGQK LLK+I RRK H QQ+A H S E
Sbjct: 399 YGFRKVDPDRWEFANEGFLRGQKQLLKSISRRKPAHGHTQQQAQQPHGQSSSVGACVEVG 578
Query: 134 NHGLRKEVENLKSDRNSLMQELVHLSQHLESAESKMLVLSDRLQGMEKHQQQMLSFLVMV 193
GL +EVE LK D+N LMQELV L Q ++ +S++ + RLQGME+ QQQM+SFL
Sbjct: 579 KFGLEEEVERLKRDKNVLMQELVRLRQQQQTTDSQLQTMVQRLQGMEQRQQQMMSFLAKA 758
Query: 194 VQSPGFMVQLLHPKENSWRLAEAGNMFDPGKED------DKPVASDGMIVQYKP 241
VQSPGF Q + + +S R N K+D ++ DG IV+Y+P
Sbjct: 759 VQSPGFFAQFVQQQNDSNRRITEVNKKRRLKQDGIAETTEQATPPDGQIVKYQP 920
>TC81396 similar to PIR|T06535|T06535 heat shock transcription factor A -
garden pea (fragment), partial (91%)
Length = 1138
Score = 167 bits (422), Expect = 8e-42
Identities = 89/193 (46%), Positives = 123/193 (63%)
Frame = +3
Query: 16 PFLNKCYDMVEDDSTDSIISWTEPSGHTFVISDITAFSVTLLPTYFKHNNFASFIRQLNI 75
PFL K +D+VED STDSI+SW+ + ++FV+ D+ FS +LP YFKH+NF+SF+RQLN
Sbjct: 186 PFLTKTFDVVEDPSTDSIVSWSG-ARNSFVVWDLHKFSTAILPRYFKHSNFSSFVRQLNT 362
Query: 76 YGFRKVDTDRWEFANENFVRGQKHLLKNIRRRKHPHVTDQQKALPEHNNSDEPSREAPNH 135
YGFRKVD DRWEFANE F+ GQ++LLK I+RR+ ++T Q E S E
Sbjct: 363 YGFRKVDPDRWEFANEGFLAGQRNLLKTIKRRR--NLTQSQAMQQETGGS---CIELGEF 527
Query: 136 GLRKEVENLKSDRNSLMQELVHLSQHLESAESKMLVLSDRLQGMEKHQQQMLSFLVMVVQ 195
GL E+E L+ DR LM E+V L Q ++ ++ + RL EK QQM++FL +
Sbjct: 528 GLEGEIERLRRDRAVLMAEIVKLRQQQHNSREQLSAMEARLLVTEKKHQQMMNFLAKALS 707
Query: 196 SPGFMVQLLHPKE 208
+ F+ QL +E
Sbjct: 708 NQSFIQQLAQNRE 746
>TC79769 homologue to GP|7158882|gb|AAF37579.1| heat shock transcription
factor {Medicago sativa}, complete
Length = 1979
Score = 164 bits (414), Expect = 7e-41
Identities = 90/200 (45%), Positives = 123/200 (61%), Gaps = 1/200 (0%)
Frame = +1
Query: 6 ENASGSSSVAPFLNKCYDMVEDDSTDSIISWTEPSGHTFVISDITAFSVTLLPTYFKHNN 65
+ A SSS+ PFL K Y+MV+D S+D I+SW+ S +FV+ + F+ LLP +FKHNN
Sbjct: 643 DEAGSSSSLPPFLAKTYEMVDDRSSDPIVSWSA-SNKSFVVWNPPEFARVLLPRFFKHNN 819
Query: 66 FASFIRQLNIYGFRKVDTDRWEFANENFVRGQKHLLKNIRRRKHPHVTDQQKALPEHN-N 124
F+SFIRQLN YGFRKVD ++WEFAN++F+RGQ HL+KNI RRK H + HN
Sbjct: 820 FSSFIRQLNTYGFRKVDPEQWEFANDDFLRGQPHLMKNIHRRKPVH------SHSLHNLQ 981
Query: 125 SDEPSREAPNHGLRKEVENLKSDRNSLMQELVHLSQHLESAESKMLVLSDRLQGMEKHQQ 184
+ P E+ + E+E LK DR L+ E E+ E +M D+L+ +E QQ
Sbjct: 982 AQAPLTESERQSMVDEIEKLKQDREQLLMETNRYQHDWETYEIQMHCSKDQLEKLEHKQQ 1161
Query: 185 QMLSFLVMVVQSPGFMVQLL 204
+MLS + +Q P V LL
Sbjct: 1162KMLSSVSEALQKPMIAVNLL 1221
>TC79192 similar to GP|14517387|gb|AAK62584.1 AT4g13980/dl3030c {Arabidopsis
thaliana}, partial (57%)
Length = 1686
Score = 162 bits (410), Expect = 2e-40
Identities = 98/238 (41%), Positives = 138/238 (57%), Gaps = 5/238 (2%)
Frame = +1
Query: 4 SKENASGSSS--VAPFLNKCYDMVEDDSTDSIISWTEPSGHTFVISDITAFSVTLLPTYF 61
S A+G S APFL K YDMV+D +TD I+SW+ + +F++ + FS LLPTYF
Sbjct: 40 SSAAAAGGSGGGPAPFLQKTYDMVDDSTTDEIVSWSSDN-KSFIVWNPPEFSRVLLPTYF 216
Query: 62 KHNNFASFIRQLNIYGFRKVDTDRWEFANENFVRGQKHLLKNIRRRKHPHVTDQQKALPE 121
KHNNF+SFIRQLN YGFRK D +RWEFANE F++ QKHLLKNI RRK P
Sbjct: 217 KHNNFSSFIRQLNTYGFRKADPERWEFANEEFIKDQKHLLKNIHRRK-----------PI 363
Query: 122 HNNSDEPSR--EAPNHGLRKEVENLKSDRNSLMQELVHLSQHLESAESKMLVLSDRLQGM 179
H++S P + L +E+E L ++N+L +L+ + +L++ + ++ RL GM
Sbjct: 364 HSHSHPPGSAVDPERAALEQEIEKLSREKNALQTKLLSYN-YLDTEKLQLEDFQRRLDGM 540
Query: 180 EKHQQQMLSFLVMVVQSPGFMVQLLHPKENSWRLAEAGNMFD-PGKEDDKPVASDGMI 236
EK Q + +F +Q F+V+LL K S LA P + +PVA ++
Sbjct: 541 EKRQTNLQNFFEKALQD-SFIVELLSRKIESMDLAAYNKKRRLPQVDQVQPVAEGSLV 711
>BE319312 similar to GP|9279701|dbj heat shock transcription factor-like
protein {Arabidopsis thaliana}, partial (33%)
Length = 707
Score = 148 bits (374), Expect = 3e-36
Identities = 80/171 (46%), Positives = 112/171 (64%)
Frame = +2
Query: 42 HTFVISDITAFSVTLLPTYFKHNNFASFIRQLNIYGFRKVDTDRWEFANENFVRGQKHLL 101
++FV+ D AFS+ LLP +FKHNNF+SF+RQLN YGF+KVD DRWEFANE F++GQK LL
Sbjct: 14 NSFVVWDPQAFSIILLPRFFKHNNFSSFVRQLNTYGFKKVDADRWEFANEMFLKGQKILL 193
Query: 102 KNIRRRKHPHVTDQQKALPEHNNSDEPSREAPNHGLRKEVENLKSDRNSLMQELVHLSQH 161
KNIRRRK +Q + + + S + G+ EV+ L+ DR LM ELV L Q
Sbjct: 194 KNIRRRK----ANQSQVMQALDPSCVELGRFGSDGI--EVDRLRRDRQVLMVELVKLRQQ 355
Query: 162 LESAESKMLVLSDRLQGMEKHQQQMLSFLVMVVQSPGFMVQLLHPKENSWR 212
++ + + + RL+ E+ Q+QM++FL +Q+P F+ QL+ KE WR
Sbjct: 356 QQNTRTHLEAMEGRLKRSEQKQKQMMNFLARAIQNPNFLQQLVQQKE--WR 502
>TC86176 similar to PIR|S59538|S59538 heat shock transcription factor HSF34
- soybean, partial (85%)
Length = 1535
Score = 131 bits (329), Expect = 5e-31
Identities = 77/194 (39%), Positives = 111/194 (56%), Gaps = 8/194 (4%)
Frame = +3
Query: 5 KENASGSSSVAPFLNKCYDMVEDDSTDSIISWTEPSGHTFVISDITAFSVTLLPTYFKHN 64
+ S S+ APFL K Y MV+D +TD +ISW+E SG +FV+ F+ LLP YFKHN
Sbjct: 372 RRKMSQRSAPAPFLLKTYQMVDDLATDDVISWSE-SGESFVVWKHADFARDLLPKYFKHN 548
Query: 65 NFASFIRQLNIYGFRKVDTDRWEFANENFVRGQKHLLKNIRRRKHPHVTDQQKALPEHN- 123
NF+SF+RQLN YGFRK+ D+WEF+NENF R KHLL +I+RRK + Q E
Sbjct: 549 NFSSFVRQLNTYGFRKLVPDKWEFSNENFKRNHKHLLTDIKRRKTISQSSSQPVEVEKTS 728
Query: 124 -NSDEPSREAPNHGLRKEVENLKSDRN------SLMQELVHLSQHLESAESKMLVLSDRL 176
N + PS N G+ + + +N + + + V+LS E + L+ L
Sbjct: 729 VNDNSPSNSG-NDGVGSTSTSSSNSKNPGSVETTTLPQCVNLSSENEKLKKDNETLNCEL 905
Query: 177 QGMEKHQQQMLSFL 190
+K +++++FL
Sbjct: 906 ARAKKQCEELVAFL 947
>TC86533 similar to PIR|T00825|T00825 probable heat shock transcription
factor At2g41690 [imported] - Arabidopsis thaliana,
partial (38%)
Length = 1159
Score = 121 bits (304), Expect = 4e-28
Identities = 69/160 (43%), Positives = 94/160 (58%)
Frame = +3
Query: 15 APFLNKCYDMVEDDSTDSIISWTEPSGHTFVISDITAFSVTLLPTYFKHNNFASFIRQLN 74
+PFL K Y +VED TD +ISW + G FV+ F+ +LPT FKH+NF+SF+RQLN
Sbjct: 423 SPFLLKTYMLVEDPITDGVISWND-EGTAFVVWQPAEFARDILPTLFKHSNFSSFVRQLN 599
Query: 75 IYGFRKVDTDRWEFANENFVRGQKHLLKNIRRRKHPHVTDQQKALPEHNNSDEPSREAPN 134
YGFRKV T RWEF NE F +G++ LL IRRRK +++Q+ ++ +SDE R +
Sbjct: 600 TYGFRKVATSRWEFCNERFKKGERELLSEIRRRK--AWSNKQQQTVQNQDSDEDQRSSST 773
Query: 135 HGLRKEVENLKSDRNSLMQELVHLSQHLESAESKMLVLSD 174
NL + L +E V L+ L S + K L D
Sbjct: 774 SS-TSGYTNLVDENKRLKKENVVLNSELTSMKRKCKELLD 890
>TC90720 similar to PIR|C96511|C96511 probable heat shock transcription
factor [imported] - Arabidopsis thaliana, partial (41%)
Length = 880
Score = 119 bits (299), Expect = 1e-27
Identities = 84/241 (34%), Positives = 116/241 (47%)
Frame = +3
Query: 9 SGSSSVAPFLNKCYDMVEDDSTDSIISWTEPSGHTFVISDITAFSVTLLPTYFKHNNFAS 68
S S APFL K Y +V+D TD I+SW++ TFV+ F+ LLP +FKHNNF+S
Sbjct: 45 SQKSVPAPFLTKTYQLVDDPLTDHIVSWSDDET-TFVVWRPPEFARDLLPNFFKHNNFSS 221
Query: 69 FIRQLNIYGFRKVDTDRWEFANENFVRGQKHLLKNIRRRKHPHVTDQQKALPEHNNSDEP 128
F+RQLN YGF+KV DRWEFAN+ F +G KHLL I RRK P QQ P
Sbjct: 222 FVRQLNTYGFKKVVADRWEFANDYFKKGAKHLLCEIHRRKTPQHYQQQ------YYEQSP 383
Query: 129 SREAPNHGLRKEVENLKSDRNSLMQELVHLSQHLESAESKMLVLSDRLQGMEKHQQQMLS 188
P+ + L S +++ L LS+ + K +L L M+ ++
Sbjct: 384 QIFQPDESICWIDSPLPSPKSN-TDILTALSEDNQRLRRKNFMLLSELSHMKNLYNDIIY 560
Query: 189 FLVMVVQSPGFMVQLLHPKENSWRLAEAGNMFDPGKEDDKPVASDGMIVQYKPPVGEKRK 248
F+ V Q + +L E + P +DK S + + P G+KR
Sbjct: 561 FIQNHVSPASPFEQRSNNSATILKLVELDSS-SPQLPNDKDCNSSSVKLFGVPLCGKKRV 737
Query: 249 H 249
H
Sbjct: 738 H 740
>TC89188 similar to PIR|S59541|S59541 heat shock transcription factor HSF29
- soybean (fragment), partial (72%)
Length = 1493
Score = 118 bits (296), Expect = 3e-27
Identities = 56/100 (56%), Positives = 72/100 (72%)
Frame = +3
Query: 9 SGSSSVAPFLNKCYDMVEDDSTDSIISWTEPSGHTFVISDITAFSVTLLPTYFKHNNFAS 68
S S PFL K Y +V+D S D ++SW E G +F++ F+ LLP YFKHNNF+S
Sbjct: 51 SQRSIPTPFLTKTYQLVDDSSVDDLVSWNE-DGTSFIVWKPAEFARDLLPKYFKHNNFSS 227
Query: 69 FIRQLNIYGFRKVDTDRWEFANENFVRGQKHLLKNIRRRK 108
F+RQLN YGFRKV DRWEFAN+ F RG+K+LL++I+RRK
Sbjct: 228 FVRQLNTYGFRKVVPDRWEFANDGFRRGEKNLLRDIQRRK 347
>TC81889 similar to SP|Q9T0D3|HSF7_ARATH Heat shock factor protein 7 (HSF 7)
(Heat shock transcription factor 7) (HSTF 7). [Mouse-ear
cress], partial (40%)
Length = 1199
Score = 91.7 bits (226), Expect(2) = 2e-22
Identities = 41/68 (60%), Positives = 55/68 (80%)
Frame = +3
Query: 41 GHTFVISDITAFSVTLLPTYFKHNNFASFIRQLNIYGFRKVDTDRWEFANENFVRGQKHL 100
G +F++ + T F+ LLP YFKHNNF+SF+RQLN YGF+KV DRWEF+NE+F RG++ L
Sbjct: 285 GTSFIVWNPTIFARDLLPKYFKHNNFSSFVRQLNTYGFKKVVPDRWEFSNESFRRGEERL 464
Query: 101 LKNIRRRK 108
L +I+RRK
Sbjct: 465 LGDIQRRK 488
Score = 31.6 bits (70), Expect(2) = 2e-22
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +2
Query: 9 SGSSSVAPFLNKCYDMVEDDSTDSIISWTE 38
S S+ PFL K + +V++ +TD +ISW +
Sbjct: 191 SQKSTPTPFLTKTHHLVDEIATDDVISWND 280
>AW736595 similar to PIR|T48399|T483 heat shock transcription factor-like
protein - Arabidopsis thaliana, partial (16%)
Length = 465
Score = 72.4 bits (176), Expect(2) = 9e-15
Identities = 34/65 (52%), Positives = 48/65 (73%)
Frame = +3
Query: 12 SSVAPFLNKCYDMVEDDSTDSIISWTEPSGHTFVISDITAFSVTLLPTYFKHNNFASFIR 71
S V PFL+K +D+V+D S + IISW+ +G +FV+ D F+ +LP +FKHNNF+SF+R
Sbjct: 153 SPVPPFLSKTFDLVDDPSLNPIISWSS-NGGSFVVWDPLEFARIILPRHFKHNNFSSFVR 329
Query: 72 QLNIY 76
QLN Y
Sbjct: 330 QLNTY 344
Score = 25.0 bits (53), Expect(2) = 9e-15
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +1
Query: 77 GFRKVDTDRWE 87
GFRK+DT +WE
Sbjct: 433 GFRKIDTHKWE 465
>AW697097 similar to PIR|T48399|T483 heat shock transcription factor-like
protein - Arabidopsis thaliana, partial (14%)
Length = 640
Score = 72.4 bits (176), Expect = 3e-13
Identities = 34/65 (52%), Positives = 48/65 (73%)
Frame = +2
Query: 12 SSVAPFLNKCYDMVEDDSTDSIISWTEPSGHTFVISDITAFSVTLLPTYFKHNNFASFIR 71
S V PFL+K +D+V+D S + IISW+ +G +FV+ D F+ +LP +FKHNNF+SF+R
Sbjct: 290 SPVPPFLSKTFDLVDDPSLNPIISWSS-NGGSFVVWDPLEFARIILPRHFKHNNFSSFVR 466
Query: 72 QLNIY 76
QLN Y
Sbjct: 467 QLNTY 481
>BF004353 similar to SP|P22335|HSF2_ Heat shock factor protein HSF24 (Heat
shock transcription factor 24) (HSTF 24), partial (17%)
Length = 406
Score = 61.2 bits (147), Expect = 6e-10
Identities = 33/66 (50%), Positives = 41/66 (62%), Gaps = 4/66 (6%)
Frame = +1
Query: 15 APFLNKCYDM----VEDDSTDSIISWTEPSGHTFVISDITAFSVTLLPTYFKHNNFASFI 70
APFL K Y + +E ++ I+SW E G+ FV+ FS LP YFKHNNF+SFI
Sbjct: 40 APFLLKTYGLLEQGIEGENGIKIVSWNE-EGNGFVVWSPAEFSELTLPKYFKHNNFSSFI 216
Query: 71 RQLNIY 76
RQLN Y
Sbjct: 217 RQLNTY 234
>TC89305 similar to GP|9279701|dbj|BAB01258.1 heat shock transcription
factor-like protein {Arabidopsis thaliana}, partial
(21%)
Length = 1242
Score = 56.6 bits (135), Expect = 1e-08
Identities = 28/75 (37%), Positives = 45/75 (59%)
Frame = +3
Query: 142 ENLKSDRNSLMQELVHLSQHLESAESKMLVLSDRLQGMEKHQQQMLSFLVMVVQSPGFMV 201
++L+ D+ LM ELV L Q + S + + +RL+G E QQQM++FL +++P F+
Sbjct: 9 DHLRRDKQVLMMELVKLRQQQHNTRSILQAMEERLRGTEIKQQQMMAFLARAMKNPAFIQ 188
Query: 202 QLLHPKENSWRLAEA 216
QLL KE + +A
Sbjct: 189 QLLQQKEKRKEIEDA 233
>TC92588 weakly similar to SP|P41152|HSF3_LYCPE Heat shock factor protein
HSF30 (Heat shock transcription factor 30) (HSTF 30),
partial (7%)
Length = 670
Score = 48.1 bits (113), Expect = 5e-06
Identities = 25/71 (35%), Positives = 41/71 (57%)
Frame = +1
Query: 134 NHGLRKEVENLKSDRNSLMQELVHLSQHLESAESKMLVLSDRLQGMEKHQQQMLSFLVMV 193
N + EVE LK D+N L E++ L Q E++ ++ + +R++ E Q QML FL +
Sbjct: 67 NPCVESEVEKLKKDQNMLKLEILKLRQQQENSNIQLTNVQERVRRAESKQYQMLFFLTKM 246
Query: 194 VQSPGFMVQLL 204
+ P FM Q++
Sbjct: 247 AKRPLFMEQII 279
>BF649848 weakly similar to GP|14517387|gb| AT4g13980/dl3030c {Arabidopsis
thaliana}, partial (12%)
Length = 570
Score = 42.7 bits (99), Expect = 2e-04
Identities = 30/120 (25%), Positives = 56/120 (46%)
Frame = +1
Query: 139 KEVENLKSDRNSLMQELVHLSQHLESAESKMLVLSDRLQGMEKHQQQMLSFLVMVVQSPG 198
KE+E L ++N L +++ H +A+ ++ L GME Q ++L++ +Q+P
Sbjct: 10 KEIEKLSQEKNYLESSVLNYKHHQSTAKFQLDNFQQLLDGMEIRQTRVLNYFEKALQNPT 189
Query: 199 FMVQLLHPKENSWRLAEAGNMFDPGKEDDKPVASDGMIVQYKPPVGEKRKHVIPIPLSPG 258
F+ +L E+ A P + +PVA+D +V V + + + LS G
Sbjct: 190 FVDRLKRKIESMDAAACNKKRRLPHVDHVQPVAADMNLVSGSTHVSTENEESLQKNLSEG 369
>BQ135539 similar to GP|9279701|dbj| heat shock transcription factor-like
protein {Arabidopsis thaliana}, partial (7%)
Length = 714
Score = 30.0 bits (66), Expect(2) = 0.20
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +2
Query: 62 KHNNFASFIRQLNIYGFRK 80
K NN++S IRQLN YGF +
Sbjct: 257 KRNNYSSSIRQLNTYGFNE 313
Score = 21.6 bits (44), Expect(2) = 0.20
Identities = 8/12 (66%), Positives = 10/12 (82%)
Frame = +1
Query: 15 APFLNKCYDMVE 26
APF+ K YD+VE
Sbjct: 106 APFILKTYDLVE 141
>TC93663 similar to PIR|T51945|T51945 heat shock transcription factor HSF3
[imported] - Arabidopsis thaliana (fragment), partial
(3%)
Length = 588
Score = 32.7 bits (73), Expect = 0.23
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +3
Query: 9 SGSSSVAPFLNKCYDMVEDDSTDSIISW 36
S + APFL K Y M+ED T+ +I W
Sbjct: 504 SKKXAAAPFLTKTYXMIEDPLTNDVIPW 587
>TC77364 similar to GP|20160852|dbj|BAB89791. contains EST
AU055715(S20012)~similar to nuclear
ribonucleoprotein~unknown protein, partial (50%)
Length = 2480
Score = 28.9 bits (63), Expect = 3.3
Identities = 25/96 (26%), Positives = 38/96 (39%), Gaps = 1/96 (1%)
Frame = +2
Query: 84 DRWEFANENFVRGQKHLLKNIRRRKHPHVTDQQKALPEHNNSDEPSREAPNHGLRKEVEN 143
D E+ N N R ++ KN R P +LP+ DE + HG+ + N
Sbjct: 1742 DTHEYMNSNLNRFNRNAAKNYRYCCSPTRIIHMSSLPQEIIEDEIASLLQEHGI---IVN 1912
Query: 144 LK-SDRNSLMQELVHLSQHLESAESKMLVLSDRLQG 178
K + N Q LV E+ E+ + + L G
Sbjct: 1913 CKVFEMNGKKQALVQFETEEEATEALVCKHASSLSG 2020
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.315 0.133 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,485,314
Number of Sequences: 36976
Number of extensions: 171359
Number of successful extensions: 673
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 658
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 661
length of query: 367
length of database: 9,014,727
effective HSP length: 97
effective length of query: 270
effective length of database: 5,428,055
effective search space: 1465574850
effective search space used: 1465574850
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 59 (27.3 bits)
Lotus: description of TM0069.1