TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0065.1
         (378 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC87422 similar to PIR|T00840|T00840 probable senescence-related...   201  4e-52
TC81648 similar to PIR|T00840|T00840 probable senescence-related...    72  9e-20
BI309046 similar to GP|15320412|dbj ERD7 protein {Arabidopsis th...    60  2e-09
TC86751 similar to GP|18252881|gb|AAL62367.1 ubiquitin activatin...    28  5.8
BQ135410                                                               28  5.8
TC76321 homologue to GP|16033631|gb|AAL13304.1 leucine zipper-co...    28  7.6
BG454043 similar to GP|2213425|emb| hypothetical protein {Citrus...    28  7.6
TC90852                                                                27  9.9

>TC87422 similar to PIR|T00840|T00840 probable senescence-related protein
           [imported] - Arabidopsis thaliana, partial (55%)
          Length = 1660

 Score =  201 bits (511), Expect = 4e-52
 Identities = 121/358 (33%), Positives = 195/358 (53%), Gaps = 22/358 (6%)
 Frame = +2

Query: 36  QEVLIQIPGCRVYLMDEGQAVELAQGQFMIIKVMDDNVSLATIIKVGNGVQWPLTKDEPV 95
           + VL+ +P   ++L+++  +V LA G   I+ + ++   +A + ++G+ +QWPL KD   
Sbjct: 185 EHVLVTVPNVILHLIEKDSSVHLASGDLTIVSLKEEEKVVAVLARIGDQIQWPLAKDVST 364

Query: 96  VKVDTLHYLFTLPVKDGGSEPLSYGVTFPEQCYGSMGLLESF---LKDHSCFSDLKT-GK 151
           VK+D  HY FTL +     E L+YG+T   +  GS  +L+     L+ +S  S  K  G 
Sbjct: 365 VKLDESHYFFTLKLPQSDDEVLNYGLTVAAK--GSKKVLKKLDEVLEKYSLLSVEKVKGV 538

Query: 152 KG---------------GLDWEQFAPRVEDYNHFLAKAIAGGTGQIVKGIFMCSNAYTNQ 196
           KG                  W   AP VEDY+    + IA G+GQ+++GI  C +   ++
Sbjct: 539 KGWEVLEKKEDVEENSAAAYWTTLAPNVEDYSGRFGRWIAAGSGQMIRGILWCGDVTVDR 718

Query: 197 VQSGGQTILTDNKNNGLVRQSVSNNKTADATKKNAMNENLKRVRQLTTMTEKLSKSLLDG 256
           ++ G          +  +++ +    +       A+N ++K V++LT M+EK++  +L G
Sbjct: 719 LKWG----------DDFMKKRLQPGSSQSQISPLALN-SMKSVKKLTKMSEKVALGVLSG 865

Query: 257 VGIMSGSVMAPVLKSQPGQAFLKMLPGEVLLASLDAVNKVFEATEAAQKQSLSATSQAAT 316
              +SG + + V+ S+PG+ F   LPGEVLLASLD  N+V +A E A +  +S +S   T
Sbjct: 866 AVKVSGFLTSSVVNSKPGKKFFSFLPGEVLLASLDGFNRVCDAVEVAGRNVMSTSSVVTT 1045

Query: 317 RMVSNRYGEEAGEATEHVFATAGHAANTAWNVSKIRKAINP---VTPASTAGGALRNS 371
            +VS++YGE+A E T   F  AGHA  TAW V K+RKA+NP   + P + A  A+R S
Sbjct: 1046GLVSHKYGEKAAEITNEGFDAAGHAIGTAWAVFKLRKALNPKSVIKPTTLAKAAVRAS 1219


>TC81648 similar to PIR|T00840|T00840 probable senescence-related protein
           [imported] - Arabidopsis thaliana, partial (36%)
          Length = 854

 Score = 72.0 bits (175), Expect(2) = 9e-20
 Identities = 45/136 (33%), Positives = 70/136 (51%), Gaps = 19/136 (13%)
 Frame = +1

Query: 36  QEVLIQIPGCRVYLMDEGQAVELAQGQFMIIKVMDDNVSLATIIKVGNGVQWPLTKDEPV 95
           +++LI+IPG  + L+D+  +VELA G F ++++     S+A   ++ + +QWPL KDE  
Sbjct: 211 EQILIKIPGAILNLIDQQYSVELASGDFTVVRLRQGENSIAVYARIADEIQWPLAKDETA 390

Query: 96  VKVDTLHYLFTLPVKDG----------------GSEPLSYGVTFPEQCYGSMGLLES--- 136
           VKVD  HY F+     G                 S+ LSYG+T   +  G   LL+    
Sbjct: 391 VKVDDSHYFFSFSAPKGYDSDEDEADRSKNSKTESDLLSYGLTIASK--GQEHLLKELDV 564

Query: 137 FLKDHSCFSDLKTGKK 152
            L++ S FS  K  +K
Sbjct: 565 ILENCSNFSVQKVSEK 612



 Score = 42.4 bits (98), Expect(2) = 9e-20
 Identities = 17/44 (38%), Positives = 27/44 (60%)
 Frame = +3

Query: 157 WEQFAPRVEDYNHFLAKAIAGGTGQIVKGIFMCSNAYTNQVQSG 200
           W   AP VE+Y+   A+ IA G+G ++KGI  C +   +++Q G
Sbjct: 723 WTTLAPNVEEYSGTAARMIASGSGHVIKGILWCGDVTMDRLQWG 854


>BI309046 similar to GP|15320412|dbj ERD7 protein {Arabidopsis thaliana},
           partial (18%)
          Length = 439

 Score = 59.7 bits (143), Expect = 2e-09
 Identities = 34/78 (43%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
 Frame = -1

Query: 303 AQKQSLSATSQAATRMVSNRYGEEAGEATEHVFATAGHAANTAWNVSKIRKAIN------ 356
           A K  +S +S   T +V +RYGEEA  AT      AGHA  TAW   KIRKAIN      
Sbjct: 439 AGKNVMSTSSTVTTELVDHRYGEEAAHATNEGLNAAGHALGTAWAAFKIRKAINPKSVFK 260

Query: 357 PVTPASTAGGALRNSIKN 374
           P T A +A  A  + +K+
Sbjct: 259 PTTLAKSAAKAAASDLKS 206


>TC86751 similar to GP|18252881|gb|AAL62367.1 ubiquitin activating enzyme -
            like protein {Arabidopsis thaliana}, partial (98%)
          Length = 1432

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 11/33 (33%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
 Frame = -2

Query: 101  LHYLF--TLPVKDGGSEPLSYGVTFPEQCYGSM 131
            + Y+F  TLP++    E + YG+ FP  C+ ++
Sbjct: 1095 IRYVFYDTLPIRSIKIEKVFYGIPFPRNCFDNL 997


>BQ135410 
          Length = 782

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 17/47 (36%), Positives = 24/47 (50%), Gaps = 3/47 (6%)
 Frame = -1

Query: 84  GVQWPLTKDEPVVKVDTLHYLFTLPVKDGGSEPL---SYGVTFPEQC 127
           G++W +   E    VD++H   +L VK  GSE L     G  FP +C
Sbjct: 713 GLEWRIFLQERFQSVDSIHQEGSLFVKVSGSESLWQ*VRGQFFPPRC 573


>TC76321 homologue to GP|16033631|gb|AAL13304.1 leucine zipper-containing
            protein {Euphorbia esula}, partial (92%)
          Length = 1468

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 13/29 (44%), Positives = 18/29 (61%)
 Frame = +1

Query: 308  LSATSQAATRMVSNRYGEEAGEATEHVFA 336
            LSATS AAT+   N Y +E   +  H+F+
Sbjct: 1315 LSATSTAATKQCGNIYHDEILVSLNHIFS 1401


>BG454043 similar to GP|2213425|emb| hypothetical protein {Citrus x
           paradisi}, partial (18%)
          Length = 663

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +2

Query: 308 LSATSQAATRMVSNRYGEEAGEATEHVF 335
           LSATS AAT+   N Y +E   +  H+F
Sbjct: 578 LSATSTAATKQCGNIYHDEILXSLNHIF 661


>TC90852 
          Length = 639

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +3

Query: 87  WPLTKDEPVVKVDTLHYLFTL 107
           WPL +D+ V K +   +LFTL
Sbjct: 126 WPLDRDQTVQKANRFRFLFTL 188


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.313    0.130    0.367 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,141,951
Number of Sequences: 36976
Number of extensions: 103933
Number of successful extensions: 364
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 360
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 362
length of query: 378
length of database: 9,014,727
effective HSP length: 98
effective length of query: 280
effective length of database: 5,391,079
effective search space: 1509502120
effective search space used: 1509502120
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 59 (27.3 bits)