TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0062.9
         (271 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC85659 SP|O24076|GBLP_MEDSA Guanine nucleotide-binding protein ...    63  1e-10
TC78188 similar to PIR|C84870|C84870 probable splicing factor [i...    61  5e-10
TC78145 similar to GP|15294240|gb|AAK95297.1 AT3g18860/MCB22_3 {...    52  2e-07
TC90247 weakly similar to GP|21592898|gb|AAM64848.1 unknown {Ara...    51  5e-07
TC89922 weakly similar to GP|15912305|gb|AAL08286.1 AT4g18900/F1...    50  1e-06
TC82717 weakly similar to GP|21539583|gb|AAM53344.1 putative coa...    48  3e-06
TC88481 similar to PIR|T00806|T02445 probable U4/U6 small nuclea...    47  1e-05
TC83414 weakly similar to GP|17381206|gb|AAL36415.1 unknown prot...    47  1e-05
TC88475 similar to GP|20260442|gb|AAM13119.1 unknown protein {Ar...    47  1e-05
AW257355 similar to GP|22022579|gb| AT3g05090/T12H1_5 {Arabidops...    45  2e-05
TC89149 similar to GP|20466231|gb|AAM20433.1 cell cycle switch p...    45  3e-05
TC87605 homologue to PIR|G96563|G96563 probable coatomer complex...    44  7e-05
TC90611 similar to GP|10177223|dbj|BAB10298. contains similarity...    43  1e-04
TC79322 similar to GP|13605815|gb|AAK32893.1 At2g32700/F24L7.16 ...    42  2e-04
TC80769 similar to GP|11141605|gb|AAG32022.1 LEUNIG {Arabidopsis...    42  3e-04
BG648991 similar to PIR|C86239|C86 protein T10O24.21 [imported] ...    41  6e-04
AW691821 similar to GP|10177570|db contains similarity to regula...    40  0.001
TC82910 similar to GP|19347844|gb|AAL86002.1 unknown protein {Ar...    40  0.001
BG649023 similar to GP|10178169|db contains similarity to WD-con...    40  0.001
TC78016 similar to GP|21537191|gb|AAM61532.1 PRL1 protein {Arabi...    40  0.001

>TC85659 SP|O24076|GBLP_MEDSA Guanine nucleotide-binding protein beta
           subunit-like protein. [Alfalfa] {Medicago sativa},
           complete
          Length = 1261

 Score = 62.8 bits (151), Expect = 1e-10
 Identities = 69/220 (31%), Positives = 96/220 (43%), Gaps = 17/220 (7%)
 Frame = +2

Query: 43  VLKSAVSDGSDYLFTGSRDGRLKRW-ALGEDAATCSATFE---SHVDWVNDAVLVGDSTL 98
           VL  A S  +  + + SRD  +K W  LGE    C  T +   +H DWV+  V    STL
Sbjct: 383 VLSVAFSIDNRQIVSASRDRTIKLWNTLGE----CKYTIQDGDAHSDWVS-CVRFSPSTL 547

Query: 99  ----VSCSSDTTLKTWDAFSTGTCTRTLRQHSDYVTCLAASEKNSNIVASGGLGGEVFVW 154
               VS S D T+K W+  +      TL  HS YV  +A S   S + ASGG  G + +W
Sbjct: 548 QPTIVSASWDRTVKVWN-LTNCKLRNTLAGHSGYVNTVAVSPDGS-LCASGGKDGVILLW 721

Query: 155 DLEAAHA----SAAKCIDATDDDTSNG--INGSGNSLPLTSLRSISSSNSISVHT-TQNQ 207
           DL          A   I A     +       + +S+ +  L S S    + V   T+  
Sbjct: 722 DLAEGKRLYSLDAGSIIHALCFSPNRYWLCAATESSIKIWDLESKSIVEDLKVDLKTEAD 901

Query: 208 GYIPIAAKGHKESVYALAMN--EGGTLLVSGGTEKVVRVW 245
             I       K+ +Y  ++N    G+ L SG T+ VVRVW
Sbjct: 902 AAIGGDTTTKKKVIYCTSLNWSADGSTLFSGYTDGVVRVW 1021



 Score = 55.5 bits (132), Expect = 2e-08
 Identities = 60/211 (28%), Positives = 88/211 (41%), Gaps = 4/211 (1%)
 Frame = +2

Query: 50  DGSDYLFTGSRDGRLKRWALGEDAATCSAT---FESHVDWVNDAVLVGDSTL-VSCSSDT 105
           D SD + T SRD  +  W L ++  T          H  +V D VL  D    +S S D 
Sbjct: 137 DNSDMIVTASRDKSIILWHLTKEDKTYGVPRRRLTGHSHFVQDVVLSSDGQFALSGSWDG 316

Query: 106 TLKTWDAFSTGTCTRTLRQHSDYVTCLAASEKNSNIVASGGLGGEVFVWDLEAAHASAAK 165
            L+ WD  + GT  R    H+  V  +A S  N  IV S      + +W+         +
Sbjct: 317 ELRLWD-LNAGTSARRFVGHTKDVLSVAFSIDNRQIV-SASRDRTIKLWNTLGECKYTIQ 490

Query: 166 CIDATDDDTSNGINGSGNSLPLTSLRSISSSNSISVHTTQNQGYIPIAAKGHKESVYALA 225
             DA  D  S  +  S ++L  T + S S   ++ V    N       A GH   V  +A
Sbjct: 491 DGDAHSDWVSC-VRFSPSTLQPTIV-SASWDRTVKVWNLTNCKLRNTLA-GHSGYVNTVA 661

Query: 226 MNEGGTLLVSGGTEKVVRVWDPRSGSKTMKL 256
           ++  G+L  SGG + V+ +WD   G +   L
Sbjct: 662 VSPDGSLCASGGKDGVILLWDLAEGKRLYSL 754



 Score = 39.3 bits (90), Expect = 0.002
 Identities = 33/165 (20%), Positives = 62/165 (37%), Gaps = 1/165 (0%)
 Frame = +2

Query: 100 SCSSDTTLKTWDAFSTGTCTR-TLRQHSDYVTCLAASEKNSNIVASGGLGGEVFVWDLEA 158
           SC+ ++  +     + G   R T+R H+D VT +A    NS+++ +      + +W L  
Sbjct: 23  SCNCNSIPQKPPIMAEGLVLRGTMRAHTDVVTAIATPIDNSDMIVTASRDKSIILWHL-- 196

Query: 159 AHASAAKCIDATDDDTSNGINGSGNSLPLTSLRSISSSNSISVHTTQNQGYIPIAAKGHK 218
                      T +D + G+       P   L                         GH 
Sbjct: 197 -----------TKEDKTYGV-------PRRRLT------------------------GHS 250

Query: 219 ESVYALAMNEGGTLLVSGGTEKVVRVWDPRSGSKTMKLKGHTDNI 263
             V  + ++  G   +SG  +  +R+WD  +G+   +  GHT ++
Sbjct: 251 HFVQDVVLSSDGQFALSGSWDGELRLWDLNAGTSARRFVGHTKDV 385


>TC78188 similar to PIR|C84870|C84870 probable splicing factor [imported] -
           Arabidopsis thaliana, partial (95%)
          Length = 1436

 Score = 60.8 bits (146), Expect = 5e-10
 Identities = 52/227 (22%), Positives = 95/227 (40%), Gaps = 15/227 (6%)
 Frame = +1

Query: 57  TGSRDGRLKRWALGEDAATCSATFESHVDWVNDAVLVGDST-LVSCSSDTTLKTWDAFST 115
           +GS D  +  W +  D        + H + V D     D T ++S S D TL+ WD   T
Sbjct: 364 SGSHDKEIFLWNVHGDCKNFMV-LKGHKNAVLDLHWTSDGTQIISASPDKTLRLWDT-ET 537

Query: 116 GTCTRTLRQHSDYVTCLAASEKNSNIVASGGLGGEVFVWDL----------EAAHASAAK 165
           G   + + +H  YV     + +   +V SG   G   +WD+          +    +A  
Sbjct: 538 GKQIKKMVEHLSYVNSCCPTRRGPPLVVSGSDDGTAKLWDMRQRGSIQTFPDKYQITAVS 717

Query: 166 CIDATDDDTSNGINGSGNSLPLTSLRSISSSNSISVHTTQNQGYIPIAAKGHKESVYALA 225
             DA+D   + GI+   N + +  LR               +G + +  +GH++ + ++ 
Sbjct: 718 FSDASDKIYTGGID---NDVKIWDLR---------------KGEVTMTLQGHQDMITSMQ 843

Query: 226 MNEGGTLLVSGGTEKVVRVWDPRSGSKTMK----LKGHTDNIRALLL 268
           ++  G+ L++ G +  + +WD R  +   +    L+GH  N    LL
Sbjct: 844 LSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLL 984



 Score = 36.2 bits (82), Expect = 0.014
 Identities = 16/49 (32%), Positives = 28/49 (56%), Gaps = 1/49 (2%)
 Frame = +1

Query: 216 GHKESVYALAMNEGGTLLVSGGTEKVVRVWDPRSGSKT-MKLKGHTDNI 263
           GH+ +VY +  N  G+++ SG  +K + +W+     K  M LKGH + +
Sbjct: 307 GHQSAVYTMKFNPTGSVVASGSHDKEIFLWNVHGDCKNFMVLKGHKNAV 453


>TC78145 similar to GP|15294240|gb|AAK95297.1 AT3g18860/MCB22_3 {Arabidopsis
           thaliana}, partial (93%)
          Length = 2633

 Score = 52.0 bits (123), Expect = 2e-07
 Identities = 39/112 (34%), Positives = 54/112 (47%)
 Frame = +3

Query: 22  LTYVLNDSDDTKHCAGINCLAVLKSAVSDGSDYLFTGSRDGRLKRWALGEDAATCSATFE 81
           L + LN  +  +   G + L V    V DG   L + S D  L+RW  G+    C  T+E
Sbjct: 366 LVWDLNSGEKVQSLKG-HQLQVTGIVVDDGD--LVSSSMDCTLRRWRNGQ----CIETWE 524

Query: 82  SHVDWVNDAVLVGDSTLVSCSSDTTLKTWDAFSTGTCTRTLRQHSDYVTCLA 133
           +H   +   + +    LV+ SSDTTLKTW      TC  T + H+D V  LA
Sbjct: 525 AHKGPIQAVIKLPTGELVTGSSDTTLKTWKG---KTCLHTFQGHADTVRGLA 671



 Score = 41.2 bits (95), Expect = 4e-04
 Identities = 22/62 (35%), Positives = 29/62 (46%)
 Frame = +3

Query: 55  LFTGSRDGRLKRWALGEDAATCSATFESHVDWVNDAVLVGDSTLVSCSSDTTLKTWDAFS 114
           L TGS D  LK W       TC  TF+ H D V    ++ D  ++S S D +L+ W    
Sbjct: 573 LVTGSSDTTLKTWK----GKTCLHTFQGHADTVRGLAVMSDLGILSASHDGSLRLWAVSG 740

Query: 115 TG 116
            G
Sbjct: 741 EG 746



 Score = 38.5 bits (88), Expect = 0.003
 Identities = 33/107 (30%), Positives = 47/107 (43%), Gaps = 8/107 (7%)
 Frame = +3

Query: 171 DDDTSNGINGSGNSLPLTSLRSISSSNSISVHTTQNQGYI-PIAAKGHKESVYALA---- 225
           DD     I G  N    TS R      +I + T  N+ ++      GH   V  +A    
Sbjct: 144 DDVRGITICGGDNGGIATSSRD----KTIRLWTRDNRKFVLDKVLVGHTSFVGPIAWIPP 311

Query: 226 ---MNEGGTLLVSGGTEKVVRVWDPRSGSKTMKLKGHTDNIRALLLD 269
              +  GG  +VSGG + +V VWD  SG K   LKGH   +  +++D
Sbjct: 312 NPDLPHGG--VVSGGMDTLVLVWDLNSGEKVQSLKGHQLQVTGIVVD 446



 Score = 37.4 bits (85), Expect = 0.006
 Identities = 47/202 (23%), Positives = 81/202 (39%), Gaps = 14/202 (6%)
 Frame = +3

Query: 83  HVDWVNDAVLVGDST--LVSCSSDTTLKTWDAFSTG-TCTRTLRQHSDYVTCLAASEKNS 139
           H D V    + G     + + S D T++ W   +      + L  H+ +V  +A    N 
Sbjct: 138 HEDDVRGITICGGDNGGIATSSRDKTIRLWTRDNRKFVLDKVLVGHTSFVGPIAWIPPNP 317

Query: 140 NI----VASGGLGGEVFVWDLEAAHASAAKCIDATDDDTSNGINGSGNSLPLTSL----- 190
           ++    V SGG+   V VWDL +     +                 G+ L +T +     
Sbjct: 318 DLPHGGVVSGGMDTLVLVWDLNSGEKVQSL---------------KGHQLQVTGIVVDDG 452

Query: 191 RSISSSNSISVHTTQNQGYIPI--AAKGHKESVYALAMNEGGTLLVSGGTEKVVRVWDPR 248
             +SSS   ++   +N   I    A KG  ++V  L   E    LV+G ++  ++ W  +
Sbjct: 453 DLVSSSMDCTLRRWRNGQCIETWEAHKGPIQAVIKLPTGE----LVTGSSDTTLKTWKGK 620

Query: 249 SGSKTMKLKGHTDNIRALLLDS 270
           +   T   +GH D +R L + S
Sbjct: 621 TCLHT--FQGHADTVRGLAVMS 680


>TC90247 weakly similar to GP|21592898|gb|AAM64848.1 unknown {Arabidopsis
           thaliana}, partial (60%)
          Length = 1041

 Score = 50.8 bits (120), Expect = 5e-07
 Identities = 53/229 (23%), Positives = 88/229 (38%), Gaps = 13/229 (5%)
 Frame = +1

Query: 34  HCAGINCLAVLKSAVSDGSDYLFTGSRDGRLKRWAL---------GEDAATCSATFESHV 84
           H   + CL       SD    L +GS DG ++ W+L          E+      +F  H 
Sbjct: 439 HLRAVTCLVF-----SDDDSLLISGSEDGYVRVWSLFSLFDDLRSREEKNLYEYSFSEHT 603

Query: 85  DWVNDAVLVG---DSTLVSCSSDTTLKTWDAFSTGTCTRTLRQHSDYVTCLAASEKNSNI 141
             V D V+     ++ +VS S D T K W + S GT  R++   S  V      +   ++
Sbjct: 604 MRVTDVVIGNGGCNAIIVSASDDRTCKVW-SLSRGTLLRSIVFPS--VINAIVLDPAEHV 774

Query: 142 VASGGLGGEVFVWDLEAAHASAAKCIDATDDDTSNGINGSGNSLPLTSLRSISSSNSISV 201
             +G   G++F                                        I++ N+  +
Sbjct: 775 FYAGSSDGKIF----------------------------------------IAALNTERI 834

Query: 202 HTTQNQGYIPIAA-KGHKESVYALAMNEGGTLLVSGGTEKVVRVWDPRS 249
            T  N G   I +   H ++V  LA ++G  LL+SG  + +VRVW+ ++
Sbjct: 835 TTIDNYGMHIIGSFSNHSKAVTCLAYSKGRNLLISGSEDGIVRVWNAKT 981


>TC89922 weakly similar to GP|15912305|gb|AAL08286.1 AT4g18900/F13C5_70
           {Arabidopsis thaliana}, partial (48%)
          Length = 864

 Score = 49.7 bits (117), Expect = 1e-06
 Identities = 43/161 (26%), Positives = 76/161 (46%), Gaps = 10/161 (6%)
 Frame = +1

Query: 96  STLVSCSSDTTLKTWDAFSTGTCTRTLRQHSDYVTCLAASEKNSNIVASGGLGGEVFVWD 155
           +TL S S+D  +K WD  + G CT T+  HSD V  +A + +   I+ SG     V + D
Sbjct: 133 NTLASASADKRVKIWDIVA-GKCTITMDHHSDKVQAVAWNHRAQQILLSGSFDHTVALKD 309

Query: 156 LEA-AHASAAKCIDATDD--------DTSNGINGSGNSLPLTSLRSISSSNSISVHTTQN 206
           +   +H+     + A  +        + S  ++    ++    +R+ + SN+ SV   QN
Sbjct: 310 VRTPSHSGYTWSVSADVESLAWDPHTEHSFAVSLEDGTIQCFDVRT-AMSNATSV---QN 477

Query: 207 QGYIPIAAKGHKESVYALAMNEGG-TLLVSGGTEKVVRVWD 246
             +       H +SV +++ N     LL +G  +K V++WD
Sbjct: 478 ATF---TLHAHDKSVTSVSYNTAAPNLLATGSMDKTVKLWD 591



 Score = 36.2 bits (82), Expect = 0.014
 Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
 Frame = +1

Query: 217 HKESVYALAMN-EGGTLLVSGGTEKVVRVWDPRSGSKTMKLKGHTDNIRAL 266
           H +SV  LA N E    L S   +K V++WD  +G  T+ +  H+D ++A+
Sbjct: 88  HTDSVLGLAWNKEYSNTLASASADKRVKIWDIVAGKCTITMDHHSDKVQAV 240



 Score = 30.0 bits (66), Expect = 0.98
 Identities = 29/116 (25%), Positives = 49/116 (42%), Gaps = 11/116 (9%)
 Frame = +1

Query: 125 HSDYVTCLAASEKNSNIVASGGLGGEVFVWDLEAAHASAAKCIDATDDDTSNGINGSGNS 184
           H+D V  LA +++ SN +AS      V +WD+      A KC    D  +      + N 
Sbjct: 88  HTDSVLGLAWNKEYSNTLASASADKRVKIWDI-----VAGKCTITMDHHSDKVQAVAWNH 252

Query: 185 LPLTSLRSISSSNSIS---VHTTQNQGYI--------PIAAKGHKESVYALAMNEG 229
                L S S  ++++   V T  + GY          +A   H E  +A+++ +G
Sbjct: 253 RAQQILLSGSFDHTVALKDVRTPSHSGYTWSVSADVESLAWDPHTEHSFAVSLEDG 420


>TC82717 weakly similar to GP|21539583|gb|AAM53344.1 putative coatomer
           complex subunit {Arabidopsis thaliana}, partial (29%)
          Length = 1118

 Score = 48.1 bits (113), Expect = 3e-06
 Identities = 32/153 (20%), Positives = 63/153 (40%), Gaps = 8/153 (5%)
 Frame = +1

Query: 102 SSDTTLKTWDAFSTGTCTRTLRQHSDYVTCLAASEKNSNIVASGGLGGEVFVWDLEAA-- 159
           S D  LK W+     +C  T   +S YV  +A + K+ +  AS  L G + +W ++++  
Sbjct: 442 SDDQVLKLWNWKKGWSCDETFEGNSHYVMQVAFNPKDPSTFASASLDGTLKIWTIDSSAP 621

Query: 160 ------HASAAKCIDATDDDTSNGINGSGNSLPLTSLRSISSSNSISVHTTQNQGYIPIA 213
                 H     C+D  + +    +  SG+      +    S N +              
Sbjct: 622 NFTFEGHLKGMNCVDYFESNDKQYLL-SGSDDYTAKVWDYDSKNCVQT------------ 762

Query: 214 AKGHKESVYALAMNEGGTLLVSGGTEKVVRVWD 246
            +GHK +V A+  +    ++++   +  V++WD
Sbjct: 763 LEGHKNNVTAICAHPEIPIIITASEDSTVKIWD 861


>TC88481 similar to PIR|T00806|T02445 probable U4/U6 small nuclear
            ribonucleoprotein [imported] - Arabidopsis thaliana,
            partial (60%)
          Length = 1836

 Score = 46.6 bits (109), Expect = 1e-05
 Identities = 42/166 (25%), Positives = 67/166 (40%)
 Frame = +1

Query: 98   LVSCSSDTTLKTWDAFSTGTCTRTLRQHSDYVTCLAASEKNSNIVASGGLGGEVFVWDLE 157
            L +CS     K W   +    + TL+ H+   T +A S  + N +A+         W+ +
Sbjct: 994  LATCSFTGATKLWSMPNVKKVS-TLKGHTQRATDVAYSPVHKNHLATASADRTAKYWNDQ 1170

Query: 158  AAHASAAKCIDATDDDTSNGINGSGNSLPLTSLRSISSSNSISVHTTQNQGYIPIAAKGH 217
             A     K     +       + SG  L   S     +     V T +      +  +GH
Sbjct: 1171 GALLGTFK--GHLERLARIAFHPSGKYLGTASYDK--TWRLWDVETEEEL----LLQEGH 1326

Query: 218  KESVYALAMNEGGTLLVSGGTEKVVRVWDPRSGSKTMKLKGHTDNI 263
              SVY L  +  G+L  S G + + RVWD R+G   + L+GH  +I
Sbjct: 1327 SRSVYGLDFHHDGSLAASCGLDALARVWDLRTGRSVLALEGHVKSI 1464



 Score = 40.0 bits (92), Expect = 0.001
 Identities = 45/222 (20%), Positives = 83/222 (37%), Gaps = 13/222 (5%)
 Frame = +1

Query: 55   LFTGSRDGRLKRWALGEDAATCSATFESHVDWVNDAVL--VGDSTLVSCSSDTTLKTWDA 112
            L T S  G  K W++        +T + H     D     V  + L + S+D T K W+ 
Sbjct: 994  LATCSFTGATKLWSMPNVKKV--STLKGHTQRATDVAYSPVHKNHLATASADRTAKYWN- 1164

Query: 113  FSTGTCTRTLRQHSDYVTCLAASEKNSNIVASGGLGGEVFVWDLEA--------AHASAA 164
               G    T + H + +  +A    +   + +        +WD+E          H+ + 
Sbjct: 1165 -DQGALLGTFKGHLERLARIAF-HPSGKYLGTASYDKTWRLWDVETEEELLLQEGHSRSV 1338

Query: 165  KCIDATDDDT---SNGINGSGNSLPLTSLRSISSSNSISVHTTQNQGYIPIAAKGHKESV 221
              +D   D +   S G++       L + RS+                  +A +GH +S+
Sbjct: 1339 YGLDFHHDGSLAASCGLDALARVWDLRTGRSV------------------LALEGHVKSI 1464

Query: 222  YALAMNEGGTLLVSGGTEKVVRVWDPRSGSKTMKLKGHTDNI 263
              ++ +  G  L +GG +   R+WD R       +  H++ I
Sbjct: 1465 LGISFSPNGYHLATGGEDNTCRIWDLRKKKSLYTIPAHSNLI 1590



 Score = 34.7 bits (78), Expect = 0.040
 Identities = 51/223 (22%), Positives = 76/223 (33%), Gaps = 9/223 (4%)
 Frame = +1

Query: 53   DYLFTGSRDGRLKRWALGEDAATCSATFESHVDWV-NDAVLVGDSTLVSCSSDTTLKTWD 111
            ++L T S D   K W    D      TF+ H++ +   A       L + S D T + WD
Sbjct: 1117 NHLATASADRTAKYW---NDQGALLGTFKGHLERLARIAFHPSGKYLGTASYDKTWRLWD 1287

Query: 112  AFSTGTCTRTLRQHSDYVTCLAASEKNSNIVASGGLGGEVFVWDLEAA--------HASA 163
               T         HS  V  L      S + AS GL     VWDL           H  +
Sbjct: 1288 V-ETEEELLLQEGHSRSVYGLDFHHDGS-LAASCGLDALARVWDLRTGRSVLALEGHVKS 1461

Query: 164  AKCIDATDDDTSNGINGSGNSLPLTSLRSISSSNSISVHTTQNQGYIPIAAKGHKESVYA 223
               I  + +       G  N+  +  LR   S  +I  H+        + ++   E    
Sbjct: 1462 ILGISFSPNGYHLATGGEDNTCRIWDLRKKKSLYTIPAHSN-------LISQVKFEP--- 1611

Query: 224  LAMNEGGTLLVSGGTEKVVRVWDPRSGSKTMKLKGHTDNIRAL 266
                + G  LV+   +   +VW  R       L GH   + +L
Sbjct: 1612 ----QEGYFLVTASYDMTAKVWSSRDFKPVKTLSGHEAKVTSL 1728


>TC83414 weakly similar to GP|17381206|gb|AAL36415.1 unknown protein
           {Arabidopsis thaliana}, partial (28%)
          Length = 1088

 Score = 46.6 bits (109), Expect = 1e-05
 Identities = 24/77 (31%), Positives = 38/77 (49%)
 Frame = +2

Query: 80  FESHVDWVNDAVLVGDSTLVSCSSDTTLKTWDAFSTGTCTRTLRQHSDYVTCLAASEKNS 139
           F+ H D + D        L+S S D T++ W       C R    H++YVTC+  +  N 
Sbjct: 284 FQGHSDDILDLAWSKSGFLLSSSVDKTVRLWQV-GISKCLRVF-SHNNYVTCVNFNPVND 457

Query: 140 NIVASGGLGGEVFVWDL 156
           N   SG + G+V +W++
Sbjct: 458 NFFISGSIDGKVRIWEV 508


>TC88475 similar to GP|20260442|gb|AAM13119.1 unknown protein {Arabidopsis
           thaliana}, partial (96%)
          Length = 1315

 Score = 46.6 bits (109), Expect = 1e-05
 Identities = 24/58 (41%), Positives = 36/58 (61%), Gaps = 4/58 (6%)
 Frame = +3

Query: 216 GHKESVYALAMNEGGTLLVSGGTEKVVRVW--DPRSGSKT--MKLKGHTDNIRALLLD 269
           GHK+ V+++A N  GT L SG  ++  R+W  DP +  K   ++LKGHTD++  L  D
Sbjct: 195 GHKKKVHSVAWNCIGTKLASGSVDQTARIWHIDPHAHGKVKDIELKGHTDSVDQLCWD 368



 Score = 33.5 bits (75), Expect = 0.089
 Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
 Frame = +3

Query: 212 IAAKGHKESVYALAMN-EGGTLLVSGGTEKVVRVWDPRSG--SKTMKLKGHTDNI 263
           I  KGH +SV  L  + +   L+ +   +K VR+WD RSG  S+  +L G   NI
Sbjct: 321 IELKGHTDSVDQLCWDPKHPDLIATASGDKTVRLWDARSGKCSQQAELSGENINI 485


>AW257355 similar to GP|22022579|gb| AT3g05090/T12H1_5 {Arabidopsis
           thaliana}, partial (11%)
          Length = 264

 Score = 45.4 bits (106), Expect = 2e-05
 Identities = 21/24 (87%), Positives = 22/24 (91%)
 Frame = +1

Query: 248 RSGSKTMKLKGHTDNIRALLLDST 271
           RSGSK +KLKGHTDN RALLLDST
Sbjct: 4   RSGSKILKLKGHTDNFRALLLDST 75



 Score = 33.9 bits (76), Expect = 0.068
 Identities = 16/52 (30%), Positives = 27/52 (51%)
 Frame = +1

Query: 215 KGHKESVYALAMNEGGTLLVSGGTEKVVRVWDPRSGSKTMKLKGHTDNIRAL 266
           KGH ++  AL ++  G   +SG +  ++R+WD            HTD++ AL
Sbjct: 31  KGHTDNFRALLLDSTGRYCLSGSSYSMIRLWDIGQQRCVHSYAVHTDSVWAL 186


>TC89149 similar to GP|20466231|gb|AAM20433.1 cell cycle switch protein
           {Arabidopsis thaliana}, partial (71%)
          Length = 1283

 Score = 45.1 bits (105), Expect = 3e-05
 Identities = 45/169 (26%), Positives = 70/169 (40%), Gaps = 10/169 (5%)
 Frame = +2

Query: 95  DSTLVSCSSDTTLKTWDAFSTGTCTRTLRQHSDYVTCLAASEKNSNIVASGGLGGEVFVW 154
           D  L S  +D  L  W+  S     R L +H+  V  +A S   SN++ SGG        
Sbjct: 581 DRELASGGNDNQLLVWNQHSQQPTLR-LTEHTAAVKAIAWSPHQSNLLVSGG-------- 733

Query: 155 DLEAAHASAAKCIDATDDDTSNGINGSGNSLPLTSLRSISSSNS-ISVHT-TQNQGYI-- 210
                  +A +CI   +    + +N       + +L    + N  +S H  +QNQ  +  
Sbjct: 734 ------GTADRCIRFWNTTNGHQLNSVDTGSQVCNLAWSKNVNELVSTHGYSQNQIMVWK 895

Query: 211 -PIAAK-----GHKESVYALAMNEGGTLLVSGGTEKVVRVWDPRSGSKT 253
            P  AK     GH   V  LAM+  G  +V+G  ++ +R W+     KT
Sbjct: 896 YPSLAKVATLTGHSMRVLYLAMSPDGQTIVTGAGDETLRFWNVFPSMKT 1042



 Score = 42.7 bits (99), Expect = 1e-04
 Identities = 45/180 (25%), Positives = 65/180 (36%), Gaps = 11/180 (6%)
 Frame = +2

Query: 98  LVSCSSDTTLKTWDAFSTGTCTRTLRQHSDYVT-----------CLAASEKNSNIVASGG 146
           LV  SS  TL    A   GTC       +  VT           C     K  + ++ G 
Sbjct: 188 LVDWSSQNTL----AAGLGTCVYLWSASNSKVTKLCDLGPYDGVCSVQWTKEGSFISIGT 355

Query: 147 LGGEVFVWDLEAAHASAAKCIDATDDDTSNGINGSGNSLPLTSLRSISSSNSISVHTTQN 206
            GG+V +WD         K        T  G+    + +    L S S   +I  H  + 
Sbjct: 356 NGGQVQIWD----GTKCKKVRTMGGHQTRTGVLAWNSRI----LASGSRDRNILQHDMRV 511

Query: 207 QGYIPIAAKGHKESVYALAMNEGGTLLVSGGTEKVVRVWDPRSGSKTMKLKGHTDNIRAL 266
                    GHK  V  L  +     L SGG +  + VW+  S   T++L  HT  ++A+
Sbjct: 512 PSDFIGKLVGHKSEVCGLKWSCDDRELASGGNDNQLLVWNQHSQQPTLRLTEHTAAVKAI 691


>TC87605 homologue to PIR|G96563|G96563 probable coatomer complex subunit
           33791-27676 [imported] - Arabidopsis thaliana, partial
           (23%)
          Length = 765

 Score = 43.9 bits (102), Expect = 7e-05
 Identities = 25/78 (32%), Positives = 39/78 (49%), Gaps = 1/78 (1%)
 Frame = +3

Query: 80  FESHVDWVND-AVLVGDSTLVSCSSDTTLKTWDAFSTGTCTRTLRQHSDYVTCLAASEKN 138
           FE+H D++   AV      ++S S D  +K WD      CT+    HS YV  +  + K+
Sbjct: 408 FEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWICTQIFEGHSHYVMQVTFNPKD 587

Query: 139 SNIVASGGLGGEVFVWDL 156
           +N  AS  L   + +W+L
Sbjct: 588 TNTFASASLDRTIKIWNL 641


>TC90611 similar to GP|10177223|dbj|BAB10298. contains similarity to
           GTP-binding regulatory protein and WD-repeat
           protein~gene_id:MPF21.14, partial (40%)
          Length = 855

 Score = 42.7 bits (99), Expect = 1e-04
 Identities = 34/135 (25%), Positives = 57/135 (42%), Gaps = 10/135 (7%)
 Frame = +1

Query: 33  KHCAGINCLAVLKS-AVSDGSDYLFTGSRDGRLKRWALGEDAATCSATFESHVDWVNDAV 91
           K C  ++ +  + S A+S    +L++ S D  +K W   +D     +   +H D +N  V
Sbjct: 457 KKCTWVHHVDTVSSLALSKDGKFLYSVSWDRTIKIWRT-KDFTCLESITNAHDDAINAVV 633

Query: 92  LVGDSTLVSCSSDTTLKTWDAFS---------TGTCTRTLRQHSDYVTCLAASEKNSNIV 142
           +  D T  S S+D  +K W               +   TL +H+  +  L  S   S I+
Sbjct: 634 VSYDGTFYSGSADKRIKVWKNLQGDDHNKKKHKHSLVDTLEKHNSGINALVLSSDES-IL 810

Query: 143 ASGGLGGEVFVWDLE 157
            SG     + VW+ E
Sbjct: 811 YSGACDRSILVWEKE 855


>TC79322 similar to GP|13605815|gb|AAK32893.1 At2g32700/F24L7.16 {Arabidopsis
            thaliana}, partial (59%)
          Length = 1824

 Score = 42.0 bits (97), Expect = 2e-04
 Identities = 47/203 (23%), Positives = 81/203 (39%), Gaps = 1/203 (0%)
 Frame = +2

Query: 49   SDGSDYLFTGSRDGRLKRWALGEDAATCSATFESHVDWVNDAVLVGDSTLVSCSS-DTTL 107
            SDG   L +   D ++  W +  +     +T E H   + D     +ST ++ SS DTT+
Sbjct: 830  SDGK-LLASAGHDKKVVLWNM--ETLKTQSTPEEHTVIITDVRFRPNSTQLATSSFDTTV 1000

Query: 108  KTWDAFSTGTCTRTLRQHSDYVTCLAASEKNSNIVASGGLGGEVFVWDLEAAHASAAKCI 167
            + WDA       +    H+ +V  L    K +++  S     E+  W++     S   C 
Sbjct: 1001 RLWDAADPSVSLQAYSGHTSHVASLDFHPKKNDLFCSCDDNNEIRFWNI-----SQYSCT 1165

Query: 168  DATDDDTSNGINGSGNSLPLTSLRSISSSNSISVHTTQNQGYIPIAAKGHKESVYALAMN 227
                   S  +     S     L + +S N +S+   +    +  + +GH   V+ +  +
Sbjct: 1166 RVFKGG-STQVRFQPRS---GHLLAAASGNVVSLFDVETDRQMH-SLQGHSGEVHCVCWD 1330

Query: 228  EGGTLLVSGGTEKVVRVWDPRSG 250
              G  L S   E  V+VW   SG
Sbjct: 1331 TNGDYLASVSQES-VKVWSLASG 1396


>TC80769 similar to GP|11141605|gb|AAG32022.1 LEUNIG {Arabidopsis thaliana},
           partial (40%)
          Length = 1362

 Score = 41.6 bits (96), Expect = 3e-04
 Identities = 34/148 (22%), Positives = 61/148 (40%)
 Frame = +3

Query: 98  LVSCSSDTTLKTWDAFSTGTCTRTLRQHSDYVTCLAASEKNSNIVASGGLGGEVFVWDLE 157
           L + S D T++ WD  + G   RT   HS  V  L       +++ S    GE+  W + 
Sbjct: 537 LATSSFDKTVRVWDVDNPGYSLRTFTGHSTSVMSLDFHPNKDDLICSCDGDGEIRYWSI- 713

Query: 158 AAHASAAKCIDATDDDTSNGINGSGNSLPLTSLRSISSSNSISVHTTQNQGYIPIAAKGH 217
               +   C+      +  G         L    + ++ N +S+   + Q     + KGH
Sbjct: 714 ----NNGSCVRV----SKGGTTQMRFQPRLGRYLAAAAENIVSILDVETQA-CRYSLKGH 866

Query: 218 KESVYALAMNEGGTLLVSGGTEKVVRVW 245
            +++ ++  +  G LL S  +E  VR+W
Sbjct: 867 TKTIDSVCWDPSGELLAS-VSEDSVRIW 947


>BG648991 similar to PIR|C86239|C86 protein T10O24.21 [imported] -
           Arabidopsis thaliana, partial (35%)
          Length = 702

 Score = 40.8 bits (94), Expect = 6e-04
 Identities = 20/60 (33%), Positives = 29/60 (48%)
 Frame = +3

Query: 98  LVSCSSDTTLKTWDAFSTGTCTRTLRQHSDYVTCLAASEKNSNIVASGGLGGEVFVWDLE 157
           ++S   DT +K WD F+TG C RT   HS  V  +  +   +  + S G    +  WD E
Sbjct: 375 ILSAGMDTKVKIWDVFNTGKCMRTYMGHSKAVRDICFTNDGTKFL-SAGYDKNIKYWDTE 551



 Score = 30.8 bits (68), Expect = 0.57
 Identities = 14/59 (23%), Positives = 24/59 (39%)
 Frame = +3

Query: 192 SISSSNSISVHTTQNQGYIPIAAKGHKESVYALAMNEGGTLLVSGGTEKVVRVWDPRSG 250
           S      + +    N G       GH ++V  +     GT  +S G +K ++ WD  +G
Sbjct: 381 SAGMDTKVKIWDVFNTGKCMRTYMGHSKAVRDICFTNDGTKFLSAGYDKNIKYWDTETG 557


>AW691821 similar to GP|10177570|db contains similarity to regulatory protein
           Nedd1~gene_id:K18J17.16 {Arabidopsis thaliana}, partial
           (19%)
          Length = 648

 Score = 40.0 bits (92), Expect = 0.001
 Identities = 21/68 (30%), Positives = 39/68 (56%), Gaps = 5/68 (7%)
 Frame = +2

Query: 205 QNQGYIPIAAK----GHKESVYALAM-NEGGTLLVSGGTEKVVRVWDPRSGSKTMKLKGH 259
           Q+ G IP+A       ++ES+ A++  N+    + SGG+ +VV++WD +       LKGH
Sbjct: 353 QSMGTIPVAGMDSVDNNEESILAISFSNKASRYVCSGGSGQVVKIWDLQKKRCIKWLKGH 532

Query: 260 TDNIRALL 267
           T+ +  ++
Sbjct: 533 TNTVTGVM 556



 Score = 28.5 bits (62), Expect = 2.9
 Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 6/66 (9%)
 Frame = +2

Query: 98  LVSCSSDTTLKTW--DAFSTGTCT----RTLRQHSDYVTCLAASEKNSNIVASGGLGGEV 151
           + S   D  +  W  +  S GT       ++  + + +  ++ S K S  V SGG G  V
Sbjct: 302 VASAGDDKRISLWRKNGQSMGTIPVAGMDSVDNNEESILAISFSNKASRYVCSGGSGQVV 481

Query: 152 FVWDLE 157
            +WDL+
Sbjct: 482 KIWDLQ 499


>TC82910 similar to GP|19347844|gb|AAL86002.1 unknown protein {Arabidopsis
           thaliana}, partial (19%)
          Length = 821

 Score = 40.0 bits (92), Expect = 0.001
 Identities = 34/152 (22%), Positives = 68/152 (44%), Gaps = 10/152 (6%)
 Frame = +1

Query: 129 VTCLAASEKNSNIVASGGLGGEVFVWDLEA--------AHASAAKCIDATDDDTSNGING 180
           +TCLA +   S I  +G + G V + ++          +H+S+ +C+         G   
Sbjct: 52  ITCLAINS-TSTIALTGSVDGSVHIVNITTGRVVSTLPSHSSSIECV---------GFAP 201

Query: 181 SGNSLPLTSLRSISSSNSISVHTTQNQGYIPIAAKGHKESVYALAMNE--GGTLLVSGGT 238
           SG      S  +I   + +++   ++       A+   E  Y +  +   G + + +G  
Sbjct: 202 SG------SWAAIGGMDKMTIWDVEHS-----LARSICEHEYGVTCSTWLGTSYVATGSN 348

Query: 239 EKVVRVWDPRSGSKTMKLKGHTDNIRALLLDS 270
           +  VR+WD RSG      +GH+++I++L L +
Sbjct: 349 DGAVRLWDSRSGECVRTFRGHSESIQSLSLSA 444



 Score = 35.4 bits (80), Expect = 0.023
 Identities = 33/133 (24%), Positives = 56/133 (41%)
 Frame = +1

Query: 114 STGTCTRTLRQHSDYVTCLAASEKNSNIVASGGLGGEVFVWDLEAAHASAAKCIDATDDD 173
           +TG    TL  HS  + C+  +   S   A GG+  ++ +WD+E  H+ A    +     
Sbjct: 133 TTGRVVSTLPSHSSSIECVGFAPSGS-WAAIGGMD-KMTIWDVE--HSLARSICEHEYGV 300

Query: 174 TSNGINGSGNSLPLTSLRSISSSNSISVHTTQNQGYIPIAAKGHKESVYALAMNEGGTLL 233
           T +   G       TS  +  S++          G      +GH ES+ +L+++     L
Sbjct: 301 TCSTWLG-------TSYVATGSNDGAVRLWDSRSGECVRTFRGHSESIQSLSLSANQEYL 459

Query: 234 VSGGTEKVVRVWD 246
           VS   +   RV+D
Sbjct: 460 VSASLDHTARVFD 498


>BG649023 similar to GP|10178169|db contains similarity to WD-containing
           protein~gene_id:K18G13.8 {Arabidopsis thaliana}, partial
           (25%)
          Length = 635

 Score = 39.7 bits (91), Expect = 0.001
 Identities = 23/74 (31%), Positives = 37/74 (49%)
 Frame = +3

Query: 83  HVDWVNDAVLVGDSTLVSCSSDTTLKTWDAFSTGTCTRTLRQHSDYVTCLAASEKNSNIV 142
           ++D V D        L+S S D T++ W   S+ +C +    HSDYVTC+  +  +    
Sbjct: 21  YLDDVLDLSWSKSQHLLSSSMDKTVRLWH-LSSKSCLKIF-SHSDYVTCIHFNPVDDRYF 194

Query: 143 ASGGLGGEVFVWDL 156
            SG L  +V +W +
Sbjct: 195 ISGSLDAKVRIWSI 236


>TC78016 similar to GP|21537191|gb|AAM61532.1 PRL1 protein {Arabidopsis
           thaliana}, partial (81%)
          Length = 1759

 Score = 39.7 bits (91), Expect = 0.001
 Identities = 33/144 (22%), Positives = 61/144 (41%), Gaps = 13/144 (9%)
 Frame = +1

Query: 138 NSNIVASGGLGGEVFVWDLEAAHASAAKCIDATDDDTS-NGINGSGNSLPLTSLRSISSS 196
           +SN++A  G G      DL+   A  A  +  +   T+ NG+   G +  + S    S  
Sbjct: 316 SSNVLALPGPGDSK---DLQKGGAHNALVVGPSMPSTATNGLGFQGKNTVVVSTSGSSER 486

Query: 197 N---SISVHTTQNQGYIPI---------AAKGHKESVYALAMNEGGTLLVSGGTEKVVRV 244
           N   S  +    ++   P+            GH   V ++A++   T   +G  ++ +++
Sbjct: 487 NFSTSALMERMPSKWPRPVWHAPWKNYRVISGHLGWVRSVAVDPSNTWFATGSADRTIKI 666

Query: 245 WDPRSGSKTMKLKGHTDNIRALLL 268
           WD  SG   + L GH + +R L +
Sbjct: 667 WDLASGVLKLTLTGHIEQVRGLAI 738



 Score = 37.0 bits (84), Expect = 0.008
 Identities = 18/64 (28%), Positives = 27/64 (42%)
 Frame = +1

Query: 208 GYIPIAAKGHKESVYALAMNEGGTLLVSGGTEKVVRVWDPRSGSKTMKLKGHTDNIRALL 267
           G + +   GH E V  LA++   T + S G +K V+ WD           GH   +  L 
Sbjct: 682 GVLKLTLTGHIEQVRGLAISHKHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLA 861

Query: 268 LDST 271
           +  T
Sbjct: 862 IHPT 873



 Score = 33.1 bits (74), Expect = 0.12
 Identities = 14/54 (25%), Positives = 27/54 (49%)
 Frame = +3

Query: 213  AAKGHKESVYALAMNEGGTLLVSGGTEKVVRVWDPRSGSKTMKLKGHTDNIRAL 266
            A  GH+ +V ++        +V+G  +  +++WD R G     L  H  ++RA+
Sbjct: 951  ALSGHENTVCSVFTRPTDPQVVTGSHDSTIKMWDLRYGKTMSTLTNHKKSVRAM 1112



 Score = 32.7 bits (73), Expect = 0.15
 Identities = 24/88 (27%), Positives = 34/88 (38%), Gaps = 1/88 (1%)
 Frame = +1

Query: 47  AVSDGSDYLFTGSRDGRLKRWALGEDAATCSATFESHVDWVNDAVLVGDST-LVSCSSDT 105
           AV   + +  TGS D  +K W L   +     T   H++ V    +    T + S   D 
Sbjct: 607 AVDPSNTWFATGSADRTIKIWDLA--SGVLKLTLTGHIEQVRGLAISHKHTYMFSAGDDK 780

Query: 106 TLKTWDAFSTGTCTRTLRQHSDYVTCLA 133
            +K WD        R+   H   V CLA
Sbjct: 781 QVKCWD-LEQNKVIRSYHGHLSGVYCLA 861


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.312    0.127    0.372 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,195,393
Number of Sequences: 36976
Number of extensions: 111745
Number of successful extensions: 684
Number of sequences better than 10.0: 119
Number of HSP's better than 10.0 without gapping: 561
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 664
length of query: 271
length of database: 9,014,727
effective HSP length: 95
effective length of query: 176
effective length of database: 5,502,007
effective search space: 968353232
effective search space used: 968353232
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 57 (26.6 bits)