BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0061.10
(276 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC78352 homologue to PIR|T14086|T14086 hypothetical protein F9N1... 504 e-143
CA920590 homologue to GP|20197033|gb expressed protein {Arabidop... 192 9e-50
TC76523 homologue to PIR|T09648|T09648 nucleolin homolog nuM1 - ... 47 8e-06
TC85985 similar to GP|5139695|dbj|BAA81686.1 expressed in cucumb... 47 1e-05
TC90952 similar to GP|15724316|gb|AAL06551.1 AT4g34150/F28A23_90... 45 2e-05
BI270652 similar to PIR|A84766|A847 hypothetical protein At2g352... 45 4e-05
TC78850 homologue to GP|10177413|dbj|BAB10544. fibrillarin-like ... 44 5e-05
TC87439 weakly similar to GP|5139695|dbj|BAA81686.1 expressed in... 44 9e-05
TC78495 homologue to PIR|S53504|S53504 extensin-like protein S3 ... 43 1e-04
BQ141909 weakly similar to GP|14253159|emb VMP3 protein {Volvox ... 43 1e-04
TC81043 weakly similar to GP|6523547|emb|CAB62280.1 hydroxyproli... 43 2e-04
TC80366 similar to GP|13877617|gb|AAK43886.1 protein kinase-like... 43 2e-04
TC85251 homologue to PIR|JQ2128|JQ2128 metallothionein - soybean... 42 3e-04
TC91646 weakly similar to GP|6523547|emb|CAB62280.1 hydroxyproli... 42 3e-04
TC81718 weakly similar to GP|22532805|gb|AAM97960.1 C. elegans P... 41 4e-04
TC79682 weakly similar to GP|6523547|emb|CAB62280.1 hydroxyproli... 41 4e-04
TC77282 homologue to GP|17065300|gb|AAL32804.1 Unknown protein {... 41 6e-04
TC83704 similar to PIR|T05005|T05005 hypothetical protein T19P19... 41 6e-04
BQ141932 weakly similar to GP|6523547|emb hydroxyproline-rich gl... 41 6e-04
TC86766 weakly similar to PIR|T06291|T06291 extensin homolog T9E... 41 6e-04
>TC78352 homologue to PIR|T14086|T14086 hypothetical protein F9N11.110 -
Arabidopsis thaliana, partial (65%)
Length = 1179
Score = 504 bits (1299), Expect = e-143
Identities = 261/282 (92%), Positives = 265/282 (93%), Gaps = 6/282 (2%)
Frame = +3
Query: 1 MSHGDTIPLHPSSQSDIDEIENLIYASPATVLPARPPSPPRASIPVT--TSSPFINSNLP 58
MSH DTIPLH SSQSDIDEIENLIYASPATVLPARPPSPPRASIPVT TSSPFINSNLP
Sbjct: 117 MSHSDTIPLHASSQSDIDEIENLIYASPATVLPARPPSPPRASIPVTSSTSSPFINSNLP 296
Query: 59 APLPPKSSISQPQLPKP--ISLPPAPPP--STRPEISSSGFGPAPNTLTEPVWDTVKRDL 114
P PPKSS S P LPKP SLPP PPP STRP+IS+SGFGPAPNTLTEPVWDTVKRDL
Sbjct: 297 NPAPPKSS-SLPSLPKPPSSSLPPLPPPPSSTRPDISTSGFGPAPNTLTEPVWDTVKRDL 473
Query: 115 SRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLILSWSASVKKSEVFAVAFA 174
SRIVSNLKLVVFPNP REDPGKALRDWDLWGPFFFIVFLGL LSWSASVKKSEVFAVAFA
Sbjct: 474 SRIVSNLKLVVFPNPNREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVFAVAFA 653
Query: 175 LLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGALICMLKDNVILKVVVVCVTL 234
LLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGALICMLK+NVI+KVVVVCVTL
Sbjct: 654 LLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGALICMLKNNVIVKVVVVCVTL 833
Query: 235 AWSSWAAYPFMSSAVNPRRKALALYPVFLMYVSVGFLIIAID 276
AWSSWAAYPFMSSAVNPRRKALALYPVFLMYVSVGFLIIAID
Sbjct: 834 AWSSWAAYPFMSSAVNPRRKALALYPVFLMYVSVGFLIIAID 959
>CA920590 homologue to GP|20197033|gb expressed protein {Arabidopsis
thaliana}, partial (39%)
Length = 755
Score = 192 bits (489), Expect = 9e-50
Identities = 97/102 (95%), Positives = 101/102 (98%)
Frame = -1
Query: 162 SVKKSEVFAVAFALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGALICMLKD 221
S+ +SEVFAVAFALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGALICMLK+
Sbjct: 428 SLSQSEVFAVAFALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGALICMLKN 249
Query: 222 NVILKVVVVCVTLAWSSWAAYPFMSSAVNPRRKALALYPVFL 263
NVI+KVVVVCVTLAWSSWAAYPFMSSAVNPRRKALALYPVFL
Sbjct: 248 NVIVKVVVVCVTLAWSSWAAYPFMSSAVNPRRKALALYPVFL 123
Score = 32.3 bits (72), Expect = 0.20
Identities = 17/26 (65%), Positives = 17/26 (65%)
Frame = -2
Query: 251 PRRKALALYPVFLMYVSVGFLIIAID 276
P K L F MYVSVGFLIIAID
Sbjct: 160 PEEKLLLSTLFFSMYVSVGFLIIAID 83
>TC76523 homologue to PIR|T09648|T09648 nucleolin homolog nuM1 - alfalfa,
partial (69%)
Length = 1615
Score = 47.0 bits (110), Expect = 8e-06
Identities = 26/59 (44%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = -1
Query: 33 PARPPSPPRASIPVTTSSPFINSNLPAPLPPKSSISQPQLPKPISLPP--APPPSTRPE 89
P RPP PPR +P + P N P PLPP + P LP P + PP PPP PE
Sbjct: 1273 PPRPPLPPRPPLPPLSLPP----NRPPPLPPLLPPNPPLLPPPPNRPPPLLPPPPLPPE 1109
>TC85985 similar to GP|5139695|dbj|BAA81686.1 expressed in cucumber
hypocotyls {Cucumis sativus}, partial (42%)
Length = 892
Score = 46.6 bits (109), Expect = 1e-05
Identities = 30/89 (33%), Positives = 44/89 (48%), Gaps = 3/89 (3%)
Frame = +3
Query: 8 PLHPSSQSDIDEIENLIYASPATVLPARPPSPPRASIPVTTSSPFINSNLPAPL--PPKS 65
P P S + + ++ AS T P P A +PV SP +S + AP+ PPK
Sbjct: 192 PTKPKSPAPVASPKSSPPASSPTAATVTPAVSPAAPVPVA-KSPAASSPVVAPVSTPPKP 368
Query: 66 S-ISQPQLPKPISLPPAPPPSTRPEISSS 93
+ +S P P P+S PP P P + P +S+
Sbjct: 369 APVSSPPAPVPVSSPPTPVPVSSPPTAST 455
Score = 39.7 bits (91), Expect = 0.001
Identities = 29/109 (26%), Positives = 45/109 (40%), Gaps = 9/109 (8%)
Frame = +3
Query: 24 IYASPATVLPARPPSPPRASIPVTTSSPFI--NSNLPAPLPPKSSISQPQ-------LPK 74
+ + PA V + PP+P S P T S+P + ++ +PA P KS + P
Sbjct: 375 VSSPPAPVPVSSPPTPVPVSSPPTASTPAVTPSAEVPAAAPSKSKKKTKKGKKHSAPAPS 554
Query: 75 PISLPPAPPPSTRPEISSSGFGPAPNTLTEPVWDTVKRDLSRIVSNLKL 123
P P PP P S P P + + R L +++ +L L
Sbjct: 555 PALEGPPAPPVGAPGPSLDASSPGPASAADESGAETIRCLQKVIGSLAL 701
Score = 30.0 bits (66), Expect = 1.0
Identities = 19/79 (24%), Positives = 42/79 (53%)
Frame = +3
Query: 10 HPSSQSDIDEIENLIYASPATVLPARPPSPPRASIPVTTSSPFINSNLPAPLPPKSSISQ 69
H + Q+ + +N++ + ++ A +S P TTS P + + AP+ ++ ++
Sbjct: 33 HTTQQN*KMDCKNVLSLALICIVFAGVGGQSPSSAP-TTSPPTVTTPSAAPV---AAPTK 200
Query: 70 PQLPKPISLPPAPPPSTRP 88
P+ P P++ P + PP++ P
Sbjct: 201 PKSPAPVASPKSSPPASSP 257
>TC90952 similar to GP|15724316|gb|AAL06551.1 AT4g34150/F28A23_90
{Arabidopsis thaliana}, partial (49%)
Length = 1046
Score = 45.4 bits (106), Expect = 2e-05
Identities = 33/98 (33%), Positives = 47/98 (47%), Gaps = 6/98 (6%)
Frame = +2
Query: 8 PLHPSSQSDIDEIENLIYASPATVLPARPPSPPRASIPVTTSSPFINSNLPAPLPPKSSI 67
P +P+S + + Y P +V PP ++SSP+ S++P+P PP SS
Sbjct: 515 PPYPASHNPSSYPPSSTYPYPQSVSSPYPPP--------SSSSPY-PSSVPSPYPPTSSS 667
Query: 68 SQPQLPKPISLPPA---PPPSTRPEIS---SSGFGPAP 99
S P P S PP+ PPPS P ++GF P P
Sbjct: 668 SPSPYPPPHSYPPSSAYPPPSYPPPAGYPPNTGFYPPP 781
Score = 32.0 bits (71), Expect = 0.27
Identities = 24/70 (34%), Positives = 30/70 (42%), Gaps = 7/70 (10%)
Frame = +2
Query: 37 PSPPRASIPVTTSSPFINSNLPAPLPPKSSISQPQ-----LPKPISLPPAPP--PSTRPE 89
P+ P + P P+ S+ P+ PP S+ PQ P P S P P PS P
Sbjct: 482 PTTPAVAYP--QPPPYPASHNPSSYPPSSTYPYPQSVSSPYPPPSSSSPYPSSVPSPYPP 655
Query: 90 ISSSGFGPAP 99
SSS P P
Sbjct: 656 TSSSSPSPYP 685
>BI270652 similar to PIR|A84766|A847 hypothetical protein At2g35230
[imported] - Arabidopsis thaliana, partial (19%)
Length = 649
Score = 44.7 bits (104), Expect = 4e-05
Identities = 26/72 (36%), Positives = 37/72 (51%)
Frame = +2
Query: 13 SQSDIDEIENLIYASPATVLPARPPSPPRASIPVTTSSPFINSNLPAPLPPKSSISQPQL 72
S++D +I + SP+ P RPP P P S + P PL P I++P+L
Sbjct: 224 SKNDFRDIVQQLTGSPSQEPPPRPPHRP----PPKPQSMRLQKIRPPPLSP---INRPRL 382
Query: 73 PKPISLPPAPPP 84
P P+ +P APPP
Sbjct: 383 PPPMPMPAAPPP 418
>TC78850 homologue to GP|10177413|dbj|BAB10544. fibrillarin-like
{Arabidopsis thaliana}, partial (87%)
Length = 1177
Score = 44.3 bits (103), Expect = 5e-05
Identities = 30/87 (34%), Positives = 35/87 (39%), Gaps = 1/87 (1%)
Frame = -1
Query: 33 PARPPSPPRASIPVTTSSPFINSNLPAPLPPKSSISQPQLPKPISLPPAPP-PSTRPEIS 91
P RP PPRA +P P PLPP + P LP P LPP PP P P
Sbjct: 226 PPRPLPPPRAPLPP-----------PKPLPPPRGLKSPPLPPPKPLPPPPPLPPLSP--- 89
Query: 92 SSGFGPAPNTLTEPVWDTVKRDLSRIV 118
P P P + + L R+V
Sbjct: 88 -----PLPPNPPRPRGGAMFKRLQRLV 23
Score = 28.5 bits (62), Expect = 2.9
Identities = 28/82 (34%), Positives = 31/82 (37%), Gaps = 19/82 (23%)
Frame = -1
Query: 26 ASPAT-VLPARPPSPPRA-SIP-------VTTSSPFINSNLPAPLPPKSSISQPQLPKP- 75
ASP T L R S P A IP T PFI PLPP + P+ P P
Sbjct: 349 ASPGTRFLVTRASSLPLAMKIPSCL*GSTTTLLPPFI-----PPLPPPRPLPPPRAPLPP 185
Query: 76 ---------ISLPPAPPPSTRP 88
+ PP PPP P
Sbjct: 184 PKPLPPPRGLKSPPLPPPKPLP 119
>TC87439 weakly similar to GP|5139695|dbj|BAA81686.1 expressed in cucumber
hypocotyls {Cucumis sativus}, partial (57%)
Length = 897
Score = 43.5 bits (101), Expect = 9e-05
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Frame = +3
Query: 26 ASPATVLPARPP--SPPRASIPVTTSSPFI---NSNLPAPLPPKSSISQPQLPKPISLPP 80
ASP + PA P + P A+ P +S P + ++ PAP+P KS P P P+S PP
Sbjct: 213 ASPKSSPPATSPKAAAPTATPPAASSPPAVTPVSTPPPAPVPVKS----PPTPAPVSSPP 380
Query: 81 APPPSTRPEISSSGFGPAPN 100
A P P + + PAP+
Sbjct: 381 AVTPVAAPTTTPAVPAPAPS 440
Score = 38.5 bits (88), Expect = 0.003
Identities = 27/81 (33%), Positives = 36/81 (44%), Gaps = 7/81 (8%)
Frame = +3
Query: 28 PATVLPARPPSP-PRASIPVTT--SSPFINSNLPAPLPPKSSISQPQ----LPKPISLPP 80
PA V PP+P P +S P T ++P +PAP P K ++ + P P L P
Sbjct: 324 PAPVPVKSPPTPAPVSSPPAVTPVAAPTTTPAVPAPAPSKGKKNKKKHGAPAPSPALLGP 503
Query: 81 APPPSTRPEISSSGFGPAPNT 101
PP+ P S P P T
Sbjct: 504 PAPPAGAPGPSEDASSPGPAT 566
Score = 33.9 bits (76), Expect = 0.070
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = +3
Query: 33 PARPPSPPRASIPVTTSSPFINSNLPAPLPPKSSISQPQLPKPISLPPAPPPSTRPEISS 92
P PS P A+ PV++ P PP + P P P++ P + PP+T P+ ++
Sbjct: 120 PTTSPSTPAATTPVSS---------PVAAPPTT----PTTPAPVASPKSSPPATSPKAAA 260
>TC78495 homologue to PIR|S53504|S53504 extensin-like protein S3 - alfalfa,
partial (97%)
Length = 1049
Score = 43.1 bits (100), Expect = 1e-04
Identities = 33/96 (34%), Positives = 42/96 (43%), Gaps = 20/96 (20%)
Frame = +3
Query: 26 ASPATVLPAR--PPSPPRASIPVTTSSPFINSNLPAPL----PPKSS-----------IS 68
+SPA P PP+ P+AS P SSP + P PL PP S +
Sbjct: 261 SSPAPPTPPANTPPTTPQASPPPVQSSPPPVQSSPPPLQSSPPPAQSTPPPVQSSPPPVQ 440
Query: 69 QPQLPKPISLPP---APPPSTRPEISSSGFGPAPNT 101
Q P P++ PP PPP++ P S F P P T
Sbjct: 441 QSPPPTPLTPPPVQSTPPPASPPPASPPPFSPPPAT 548
Score = 37.7 bits (86), Expect = 0.005
Identities = 42/174 (24%), Positives = 68/174 (38%), Gaps = 16/174 (9%)
Frame = +3
Query: 11 PSSQSDIDEIENLIYASPATVLPARPPSPP-RASIPVTTSSPFINSNLPAPLPPKSSISQ 69
P QS +++ + +T P + PP + S P T +P + P P P +
Sbjct: 345 PPVQSSPPPLQSSPPPAQSTPPPVQSSPPPVQQSPPPTPLTPPPVQSTPPPASPPPASPP 524
Query: 70 PQLPKPISLPPA-PPPST-RPEISSSGFGPAPNTLTEPVWDTVKRDLSRI---------- 117
P P P + PPA PPP+T P ++ + P T P +K +
Sbjct: 525 PFSPPPATPPPATPPPATPPPALTPTPLSSPPATTPAPAPAKLKSKAPALAPVLSPSDAP 704
Query: 118 ---VSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLILSWSASVKKSEV 168
+S+L + P+ + + L + G F FL L+ SV SE+
Sbjct: 705 APGLSSLSPSISPSGTDDSGAEKLWSHKMVGLVFGCAFLSLLF*IDTSVFSSEL 866
Score = 31.6 bits (70), Expect = 0.35
Identities = 24/76 (31%), Positives = 28/76 (36%), Gaps = 6/76 (7%)
Frame = +3
Query: 36 PPSPPRASIPVTTSSPFINSNLPAPL---PPKSSISQPQL---PKPISLPPAPPPSTRPE 89
P S P P + P P P+ PP S P L P P P P S+ P
Sbjct: 255 PNSSPAPPTPPANTPPTTPQASPPPVQSSPPPVQSSPPPLQSSPPPAQSTPPPVQSSPPP 434
Query: 90 ISSSGFGPAPNTLTEP 105
+ S P P LT P
Sbjct: 435 VQQS---PPPTPLTPP 473
>BQ141909 weakly similar to GP|14253159|emb VMP3 protein {Volvox carteri f.
nagariensis}, partial (13%)
Length = 1223
Score = 43.1 bits (100), Expect = 1e-04
Identities = 30/82 (36%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = -1
Query: 8 PLHPSSQSDIDEIENLIY-ASPATVLPARPPSPPRASIPVTTSSPFINSNLPAPLPPKSS 66
PLH S + L + P LP SP +P SSP +S LP+P PP S
Sbjct: 416 PLHFPPASSLSHSFPLFFPCRPPPFLPLSHASPFLLFLP-PLSSPSPSSPLPSPPPPSSL 240
Query: 67 ISQPQLPKPISLPPAPPPSTRP 88
P P P+ PP PPP P
Sbjct: 239 FPSP-TPPPLPPPPPPPPPASP 177
Score = 38.5 bits (88), Expect = 0.003
Identities = 38/113 (33%), Positives = 46/113 (40%), Gaps = 2/113 (1%)
Frame = -2
Query: 26 ASPATVLPAR-PPSPPRASIPVTTSSPFINSNLPAPLPPKSSISQPQLPKPISLPPAPP- 83
+SP+ LP SPP P SP P P PP SS +P L P LPP PP
Sbjct: 343 SSPSLTLPPSFCSSPPFLPPPPPPPSP------PPPPPPPSSPLRPPLRSPPPLPPLPPL 182
Query: 84 PSTRPEISSSGFGPAPNTLTEPVWDTVKRDLSRIVSNLKLVVFPNPYREDPGK 136
P P + P P+ L R +S+ VVF P R+ GK
Sbjct: 181 PPFTPSSHLTTSSPPPSFL-------------RCISS---VVFIFPLRKRDGK 71
Score = 31.2 bits (69), Expect = 0.45
Identities = 25/86 (29%), Positives = 33/86 (38%), Gaps = 2/86 (2%)
Frame = -3
Query: 8 PLHPSSQSDIDEIENLIYASPATVLPARPPSPPRASIPVTTSSPFINSNLPAPLPPKSSI 67
PL P+ + P+ L + PPS S + SN LP +
Sbjct: 585 PLSPALPPPTSPARRSYSSDPSLSLRSLPPSHILCVNSCNDDSTSVCSNSLFSLPFPPPL 406
Query: 68 SQPQLPKPI--SLPPAPPPSTRPEIS 91
S LP P S+ P PPPS P +S
Sbjct: 405 SPRLLPVPFLPSIFPLPPPSVPPPLS 328
>TC81043 weakly similar to GP|6523547|emb|CAB62280.1 hydroxyproline-rich
glycoprotein DZ-HRGP {Volvox carteri f. nagariensis},
partial (19%)
Length = 555
Score = 42.7 bits (99), Expect = 2e-04
Identities = 29/78 (37%), Positives = 34/78 (43%)
Frame = +1
Query: 28 PATVLPARPPSPPRASIPVTTSSPFINSNLPAPLPPKSSISQPQLPKPISLPPAPPPSTR 87
P P P SPP+ P + SP PAP PP S P P P S PP+PPP++
Sbjct: 205 PPPPAPPSPGSPPKPPAPPSPGSP----PAPAPAPPPIPPSPPAPPSPGS-PPSPPPAS- 366
Query: 88 PEISSSGFGPAPNTLTEP 105
PAP T P
Sbjct: 367 ---------PAPPKPTPP 393
Score = 36.6 bits (83), Expect = 0.011
Identities = 21/61 (34%), Positives = 26/61 (42%)
Frame = +1
Query: 28 PATVLPARPPSPPRASIPVTTSSPFINSNLPAPLPPKSSISQPQLPKPISLPPAPPPSTR 87
PA P PP+P A P+ S P S P PP +S + P+ P P P P
Sbjct: 250 PAPPSPGSPPAPAPAPPPIPPSPPAPPSPGSPPSPPPASPAPPKPTPPKGSPLLPMPEKT 429
Query: 88 P 88
P
Sbjct: 430 P 432
Score = 34.7 bits (78), Expect = 0.041
Identities = 23/54 (42%), Positives = 25/54 (45%), Gaps = 1/54 (1%)
Frame = +1
Query: 27 SPATVLPARPPSPPRASIPVTTSSPFINSNL-PAPLPPKSSISQPQLPKPISLP 79
+PA P PPSPP P + SP S P P PPK S P LP P P
Sbjct: 280 APAPAPPPIPPSPPAPPSPGSPPSPPPASPAPPKPTPPKGS---PLLPMPEKTP 432
>TC80366 similar to GP|13877617|gb|AAK43886.1 protein kinase-like protein
{Arabidopsis thaliana}, partial (16%)
Length = 814
Score = 42.7 bits (99), Expect = 2e-04
Identities = 31/87 (35%), Positives = 44/87 (49%), Gaps = 4/87 (4%)
Frame = +3
Query: 26 ASPATVLPARPP-SPPRASIPVTTSSPFINS-NLPAPLPPKSSISQPQLPKPISLPPAPP 83
+SP P+ PP S P PVT S+P ++ P+ PP ++ S P P + PP+PP
Sbjct: 3 SSPPPATPSSPPPSTPANPPPVTPSAPPPSTPATPSSPPPSTTPSAPPPSTPSNSPPSPP 182
Query: 84 --PSTRPEISSSGFGPAPNTLTEPVWD 108
P+ P S G P+P + T P D
Sbjct: 183 TTPAISPP-SGGGTTPSPPSRTPPSSD 260
Score = 34.7 bits (78), Expect = 0.041
Identities = 26/71 (36%), Positives = 33/71 (45%), Gaps = 5/71 (7%)
Frame = +3
Query: 28 PATVLPARPPSPPRASIPVTTSSPFIN-----SNLPAPLPPKSSISQPQLPKPISLPPAP 82
P+T A PPS P S P ++P I+ P+P P ++ S P P S P
Sbjct: 120 PSTTPSAPPPSTPSNSPPSPPTTPAISPPSGGGTTPSP-PSRTPPSSDDSPSPPSSKTPP 296
Query: 83 PPSTRPEISSS 93
PPS P SSS
Sbjct: 297 PPS--PPSSSS 323
>TC85251 homologue to PIR|JQ2128|JQ2128 metallothionein - soybean, partial
(93%)
Length = 1554
Score = 42.0 bits (97), Expect = 3e-04
Identities = 32/87 (36%), Positives = 38/87 (42%), Gaps = 8/87 (9%)
Frame = -2
Query: 27 SPATVLPARPPSPPRASIPVTT------SSPFINSNLPAPLPPKSSISQPQLPK--PISL 78
+PAT PP+ P A PVTT +SP I S P + PKS+ PK P S
Sbjct: 851 APATAPTKLPPTTPTAITPVTTQPPTVVASPPITSQPPVTVAPKSAPVTSPAPKIAPASS 672
Query: 79 PPAPPPSTRPEISSSGFGPAPNTLTEP 105
P PPP P+ S P L P
Sbjct: 671 PKVPPPQP-PKSSPVSTPTLPPPLPPP 594
Score = 41.2 bits (95), Expect = 4e-04
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 6/98 (6%)
Frame = -2
Query: 8 PLHPSSQSDIDEIENLIYASPATVLPARPP-SPPRASIPVTTSSPFI----NSNLPAPLP 62
P P++ + + + ASP + ++PP + S PVT+ +P I + +P P P
Sbjct: 821 PTTPTAITPVTTQPPTVVASPP--ITSQPPVTVAPKSAPVTSPAPKIAPASSPKVPPPQP 648
Query: 63 PKSS-ISQPQLPKPISLPPAPPPSTRPEISSSGFGPAP 99
PKSS +S P LP P+ PPP P + PAP
Sbjct: 647 PKSSPVSTPTLPPPLP----PPPKISPTPVQTPPAPAP 546
Score = 35.0 bits (79), Expect = 0.031
Identities = 29/90 (32%), Positives = 37/90 (40%), Gaps = 12/90 (13%)
Frame = -2
Query: 27 SPATVLPARPPSPPRASIPVTTS------------SPFINSNLPAPLPPKSSISQPQLPK 74
+PA+ PP PP++S PV+T SP PAP P K+ + P
Sbjct: 686 APASSPKVPPPQPPKSS-PVSTPTLPPPLPPPPKISPTPVQTPPAPAPVKA--TPVPAPA 516
Query: 75 PISLPPAPPPSTRPEISSSGFGPAPNTLTE 104
P P P P+T P I PAP E
Sbjct: 515 PAKQAPTPAPATSPPI------PAPTPAIE 444
Score = 35.0 bits (79), Expect = 0.031
Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Frame = -2
Query: 27 SPATVLPARPPSPPRASIPVTTS---SPFINSNLPAPLPPKSSISQPQLPKPISLPPAPP 83
S T+ P PP P + PV T +P + +PAP P K Q P P + PP P
Sbjct: 629 STPTLPPPLPPPPKISPTPVQTPPAPAPVKATPVPAPAPAK----QAPTPAPATSPPIPA 462
Query: 84 PS 85
P+
Sbjct: 461 PT 456
Score = 35.0 bits (79), Expect = 0.031
Identities = 30/113 (26%), Positives = 43/113 (37%), Gaps = 20/113 (17%)
Frame = -2
Query: 8 PLHPSSQSDIDEIENLIYASPATVLPARPPSP--------PRASIPVTTSSPFINSNLPA 59
PL P + ++ +P P P+P P S P+ +P I + +PA
Sbjct: 608 PLPPPPKISPTPVQTPPAPAPVKATPVPAPAPAKQAPTPAPATSPPIPAPTPAIEAPVPA 429
Query: 60 PLP---------PKSSISQPQLPKPISL---PPAPPPSTRPEISSSGFGPAPN 100
P PK Q P P + PPAPP T + S + PAP+
Sbjct: 428 PESSKPKRRRHRPKHRRHQAPAPAPTVIHKSPPAPPTDTTAD-SDTAPAPAPS 273
>TC91646 weakly similar to GP|6523547|emb|CAB62280.1 hydroxyproline-rich
glycoprotein DZ-HRGP {Volvox carteri f. nagariensis},
partial (15%)
Length = 984
Score = 42.0 bits (97), Expect = 3e-04
Identities = 29/85 (34%), Positives = 41/85 (48%), Gaps = 6/85 (7%)
Frame = +1
Query: 27 SPATVLPARPPSP-PRASIPVTTSSPFINSNLPAPLPPKSSISQP--QL---PKPISLPP 80
SP+ + P R PS P + P T+SP ++ P PP+ P QL P+P+ P
Sbjct: 265 SPSPLSPLRFPSRLPLTTPPSLTTSPSPTASPPPRSPPRPPPRSPPRQLMSPPRPLPRSP 444
Query: 81 APPPSTRPEISSSGFGPAPNTLTEP 105
+PPP PE+S + P P P
Sbjct: 445 SPPPRNPPELSRTTPTPRPPMSPSP 519
Score = 37.7 bits (86), Expect = 0.005
Identities = 26/78 (33%), Positives = 32/78 (40%), Gaps = 13/78 (16%)
Frame = +1
Query: 26 ASPATVLPARPP--SP-----------PRASIPVTTSSPFINSNLPAPLPPKSSISQPQL 72
ASP P RPP SP PR+ P + P ++ P P PP S P
Sbjct: 352 ASPPPRSPPRPPPRSPPRQLMSPPRPLPRSPSPPPRNPPELSRTTPTPRPPMSPSPSPTS 531
Query: 73 PKPISLPPAPPPSTRPEI 90
P P + PP P RP +
Sbjct: 532 P-PAATPPVSRPPPRPAL 582
Score = 37.4 bits (85), Expect = 0.006
Identities = 26/79 (32%), Positives = 31/79 (38%), Gaps = 12/79 (15%)
Frame = +1
Query: 27 SPATVLPARPPSPPRASIPVTTSSPFINSNLPAPLPPKSSISQPQLPK----PISLPPA- 81
SP LP P PPR + P ++ P P PP S P P P+S PP
Sbjct: 415 SPPRPLPRSPSPPPR-------NPPELSRTTPTPRPPMSPSPSPTSPPAATPPVSRPPPR 573
Query: 82 -------PPPSTRPEISSS 93
PPP P + SS
Sbjct: 574 PALRRLLPPPPLPPTLPSS 630
Score = 34.7 bits (78), Expect = 0.041
Identities = 28/85 (32%), Positives = 34/85 (39%), Gaps = 12/85 (14%)
Frame = +1
Query: 33 PARPPSPPRASIPVTTSSPFINSNLPAPL----------PPKSSISQPQLPKPISLPPAP 82
P PP PP S P SP P PL PP+ S + P P+S P+P
Sbjct: 364 PRSPPRPPPRSPPRQLMSP------PRPLPRSPSPPPRNPPELSRTTPTPRPPMSPSPSP 525
Query: 83 --PPSTRPEISSSGFGPAPNTLTEP 105
PP+ P +S PA L P
Sbjct: 526 TSPPAATPPVSRPPPRPALRRLLPP 600
Score = 32.7 bits (73), Expect = 0.16
Identities = 23/55 (41%), Positives = 26/55 (46%), Gaps = 4/55 (7%)
Frame = +1
Query: 36 PPSPPRASIPVTTSSP---FINSNLPAPLPPKSSISQPQLPKPIS-LPPAPPPST 86
P SPP A+ PV+ P P PLPP S L S LPPA PP+T
Sbjct: 523 PTSPPAATPPVSRPPPRPALRRLLPPPPLPPTLPSSMASLFLAASVLPPASPPTT 687
Score = 30.8 bits (68), Expect = 0.59
Identities = 30/107 (28%), Positives = 42/107 (39%), Gaps = 6/107 (5%)
Frame = +1
Query: 37 PSP-PRASIPVTTSSPFINSNLPAPLPPKSSISQPQLPKPIS-----LPPAPPPSTRPEI 90
PSP A P + SP P+ LP + S P P + PP PPP + P
Sbjct: 229 PSPLMEAPSPRPSPSPLSPLRFPSRLPLTTPPSLTTSPSPTASPPPRSPPRPPPRSPPRQ 408
Query: 91 SSSGFGPAPNTLTEPVWDTVKRDLSRIVSNLKLVVFPNPYREDPGKA 137
S P P + + P + +LSR + + P+P P A
Sbjct: 409 LMSPPRPLPRSPSPPPRN--PPELSRTTPTPRPPMSPSPSPTSPPAA 543
>TC81718 weakly similar to GP|22532805|gb|AAM97960.1 C. elegans PQN-75
protein (corresponding sequence W03D2.1b)
{Caenorhabditis elegans}, partial (10%)
Length = 546
Score = 41.2 bits (95), Expect = 4e-04
Identities = 25/74 (33%), Positives = 32/74 (42%)
Frame = +3
Query: 36 PPSPPRASIPVTTSSPFINSNLPAPLPPKSSISQPQLPKPISLPPAPPPSTRPEISSSGF 95
PP S P T S P + P P P S P P P P +PPPS P + G
Sbjct: 243 PPRIGPRSPPTTGSPPTRPPSSPLPDPTTGSPPPPGSPPPDPTPGSPPPSPDP---TPGS 413
Query: 96 GPAPNTLTEPVWDT 109
P P + +P W++
Sbjct: 414 PPPPGSPPDPSWES 455
>TC79682 weakly similar to GP|6523547|emb|CAB62280.1 hydroxyproline-rich
glycoprotein DZ-HRGP {Volvox carteri f. nagariensis},
partial (17%)
Length = 1031
Score = 41.2 bits (95), Expect = 4e-04
Identities = 34/97 (35%), Positives = 40/97 (41%), Gaps = 7/97 (7%)
Frame = +1
Query: 8 PLHPSSQSDIDEIENLIYASPATVLPARPPSPPRASIPVTTSSPF-------INSNLPAP 60
P HP S I + P+ L P PP +S P S PF + + P P
Sbjct: 7 PFHPPSPPLIPNP----FQPPSPPLIPNPFQPPPSSPP--PSFPFPPIVIPGLTPSPPPP 168
Query: 61 LPPKSSISQPQLPKPISLPPAPPPSTRPEISSSGFGP 97
PPKS P LP P PP P + P SSS F P
Sbjct: 169PPPKSIFPAPLLPFPPLFPPPLSPGS-PPTSSSNFSP 276
>TC77282 homologue to GP|17065300|gb|AAL32804.1 Unknown protein {Arabidopsis
thaliana}, partial (19%)
Length = 787
Score = 40.8 bits (94), Expect = 6e-04
Identities = 20/49 (40%), Positives = 26/49 (52%), Gaps = 1/49 (2%)
Frame = +2
Query: 58 PAPLPPKSSISQPQLPKPISLPPAPPPSTRPEISSS-GFGPAPNTLTEP 105
PAP P + S + P P + P P P+ P SSS G P+PNT + P
Sbjct: 197 PAPAPTQLSPNSAPAPSPSTKSPTPSPAVSPSTSSSPGSSPSPNTFSPP 343
>TC83704 similar to PIR|T05005|T05005 hypothetical protein T19P19.70 -
Arabidopsis thaliana, partial (15%)
Length = 716
Score = 40.8 bits (94), Expect = 6e-04
Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Frame = +1
Query: 24 IYASPATV-LPARPPSPPRASIPVTTSSPFINSNLPAPLPPKSSISQPQLPKPISLPPAP 82
+Y P V + PP P + +T P ++LP PLP + + Q P P++LPP P
Sbjct: 190 MYVEPQEVRMKLEPPPPVAFANNDSTVPPVATTSLPEPLPYQH---KEQPPIPVTLPPPP 360
Query: 83 PPSTRPEISSSGFGPAP 99
P S P + P P
Sbjct: 361 PLSKLPPATREQLPPPP 411
Score = 28.9 bits (63), Expect = 2.2
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = +1
Query: 36 PPSPPRASIPVTTSSPFINSNLPAPLPPKSSI---SQPQLPKPISLP 79
PP PP A +P P LP P PP S + ++ +LP P LP
Sbjct: 451 PPPPPSAKLP-----PAARERLPLP-PPLSKLPPAARERLPPPSPLP 573
>BQ141932 weakly similar to GP|6523547|emb hydroxyproline-rich glycoprotein
DZ-HRGP {Volvox carteri f. nagariensis}, partial (30%)
Length = 1338
Score = 40.8 bits (94), Expect = 6e-04
Identities = 22/60 (36%), Positives = 26/60 (42%)
Frame = -1
Query: 28 PATVLPARPPSPPRASIPVTTSSPFINSNLPAPLPPKSSISQPQLPKPISLPPAPPPSTR 87
P V P PP+PP +S P S P P P S P P P+ PP PP +R
Sbjct: 318 PPAVPPPPPPTPPPSSPPALVSPPPRPFLFPPPPNQPSPSPSPPPPPPLPPPPPQPPQSR 139
Score = 38.9 bits (89), Expect = 0.002
Identities = 34/92 (36%), Positives = 40/92 (42%), Gaps = 10/92 (10%)
Frame = -3
Query: 7 IPLHPSSQSDIDEIENLIYASPATVLPARP--PSPPRASIPVTTSSPFI---NSNLPAPL 61
+P P S + ID A P + P P SPPR P SP I +S L P
Sbjct: 421 LPPPPRSPTVIDPRPPAASAVPLPLRPLYPLRDSPPRRPPPPPPHSPSILPPSSRLSPPT 242
Query: 62 P-PKSSISQPQLPKPISLPPAPP----PSTRP 88
P P SS P LP P+ P PP P+T P
Sbjct: 241 PLPLSSSP*PALPLPLPPPTPPPPPPAPTTTP 146
Score = 38.1 bits (87), Expect = 0.004
Identities = 36/117 (30%), Positives = 46/117 (38%), Gaps = 24/117 (20%)
Frame = -1
Query: 8 PLHPSSQSDIDEIENLIYASPATVLPARPPSPPRASIPVTTSSPFINSNLPAPLPPKSSI 67
P P+SQS + +PA P+RPP PRA P ++ P P P+SS
Sbjct: 561 PNPPASQSPAT-LNRPTSHTPACPPPSRPPPHPRAPSLSPPPPPHPPTSPPRPGRPRSST 385
Query: 68 SQP----QLPKPISL---------------PPAPPPSTRPEISSSG-----FGPAPN 100
P Q P +L PP PPPS+ P + S F P PN
Sbjct: 384 LAPPPHRQFHSPSALCTHCGIPPPAVPPPPPPTPPPSSPPALVSPPPRPFLFPPPPN 214
Score = 33.5 bits (75), Expect = 0.091
Identities = 24/68 (35%), Positives = 30/68 (43%), Gaps = 5/68 (7%)
Frame = -2
Query: 33 PARPPSPPRASIPVTTSSPFINSNLPAPLPPKSSISQPQLPKPISLPPAPPPS-----TR 87
P PP PP P+ P S+LP P P S + P P PP PPPS
Sbjct: 314 PPSPPPPP----PLPLHPPPQLSSLP-PHAPSSFLLPLTSPPPPPPPPHPPPSPPRPHNH 150
Query: 88 PEISSSGF 95
P + +SG+
Sbjct: 149 PNLGTSGW 126
Score = 32.0 bits (71), Expect = 0.27
Identities = 26/86 (30%), Positives = 30/86 (34%), Gaps = 13/86 (15%)
Frame = -2
Query: 28 PATVLPARPPSPPRASIPVTTSSPFI---------NSNLPAPLP----PKSSISQPQLPK 74
PA V PSPPR T PF+ + P PLP P+ S P P
Sbjct: 413 PAPVAHGHRPSPPRRIGSSTPPPPFVPIAGFPPPPSPPPPPPLPLHPPPQLSSLPPHAPS 234
Query: 75 PISLPPAPPPSTRPEISSSGFGPAPN 100
LP PP P P P+
Sbjct: 233 SFLLPLTSPPPPPPPPHPPPSPPRPH 156
Score = 30.4 bits (67), Expect = 0.77
Identities = 25/84 (29%), Positives = 38/84 (44%), Gaps = 16/84 (19%)
Frame = -1
Query: 8 PLHPSSQSDIDEIENLIY--ASPATVLP---ARPPSPPRASIPVTTS------SPFINSN 56
P P S + +L+ ++P T+ P A PPSP P TS SP ++ +
Sbjct: 1209 PRLPRSTHPCSVVSSLVVVRSTPHTLAPISSASPPSPRHRPYPPLTSPHTARYSPSLSLS 1030
Query: 57 -----LPAPLPPKSSISQPQLPKP 75
P P PP++++S LP P
Sbjct: 1029 HYPAPRPVPRPPRAAVSILHLPLP 958
Score = 28.9 bits (63), Expect = 2.2
Identities = 27/91 (29%), Positives = 33/91 (35%), Gaps = 13/91 (14%)
Frame = -2
Query: 28 PATVLPARPPSPPRASIPVTTSSPFINSNLPAPLPPKSSISQPQLPKP-----ISLPPAP 82
PAT LPA PP P R SP + P PP + ++ P P S PP P
Sbjct: 515 PATPLPA-PPHPVRPPTHARLRSPPLRPPTLRP-PPPAPVAHGHRPSPPRRIGSSTPPPP 342
Query: 83 --------PPSTRPEISSSGFGPAPNTLTEP 105
PP + P P P + P
Sbjct: 341 FVPIAGFPPPPSPPPPPPLPLHPPPQLSSLP 249
Score = 27.7 bits (60), Expect = 5.0
Identities = 24/87 (27%), Positives = 31/87 (35%), Gaps = 20/87 (22%)
Frame = -1
Query: 33 PARPPSPPRASIPVTT-------------SSPFINSNLPAPL--PPKSSISQPQLPKPIS 77
P P SPPR P ++ S+ + +P P PP P P +
Sbjct: 435 PHPPTSPPRPGRPRSSTLAPPPHRQFHSPSALCTHCGIPPPAVPPPPPPTPPPSSPPALV 256
Query: 78 LPPA-----PPPSTRPEISSSGFGPAP 99
PP PPP +P S S P P
Sbjct: 255 SPPPRPFLFPPPPNQPSPSPSPPPPPP 175
Score = 27.7 bits (60), Expect = 5.0
Identities = 19/62 (30%), Positives = 24/62 (38%)
Frame = -2
Query: 27 SPATVLPARPPSPPRASIPVTTSSPFINSNLPAPLPPKSSISQPQLPKPISLPPAPPPST 86
S T+ P P PP + P T P P PP +P + PP PP+
Sbjct: 572 STTTLTPQHPNPPPP*TDPPAT---------PLPAPPHPV--RPPTHARLRSPPLRPPTL 426
Query: 87 RP 88
RP
Sbjct: 425 RP 420
Score = 26.9 bits (58), Expect = 8.5
Identities = 24/85 (28%), Positives = 33/85 (38%), Gaps = 5/85 (5%)
Frame = -3
Query: 33 PARPPSPPRASIPVTTSSPF--INSNLPAPLPPKSSISQPQLPKPISLPPAPPPSTR--- 87
P PPS P P T P + +P+ PP + + P P S P PP S
Sbjct: 565 PP*PPSIPIPRHPEPTHQPHPCLPPPIPSAPPPTRAFALPPSAPPPSDLPPPPRSPTVID 386
Query: 88 PEISSSGFGPAPNTLTEPVWDTVKR 112
P ++ P P P+ D+ R
Sbjct: 385 PRPPAASAVPLPLRPLYPLRDSPPR 311
>TC86766 weakly similar to PIR|T06291|T06291 extensin homolog T9E8.80 -
Arabidopsis thaliana, partial (18%)
Length = 1260
Score = 40.8 bits (94), Expect = 6e-04
Identities = 30/97 (30%), Positives = 35/97 (35%)
Frame = +2
Query: 3 HGDTIPLHPSSQSDIDEIENLIYASPATVLPARPPSPPRASIPVTTSSPFINSNLPAPLP 62
H T P++P Y SP P P PP S P + P + P P P
Sbjct: 182 HSPTPPVYP-------------YLSPPPPPPVHSPPPPVYSPPPPSPPPCVEPPPPPP-P 319
Query: 63 PKSSISQPQLPKPISLPPAPPPSTRPEISSSGFGPAP 99
P P P P P PPPS P S P+P
Sbjct: 320 PCVEPPPPSSPAPHQTPYHPPPSPSPPPSPVYAYPSP 430
Score = 35.4 bits (80), Expect = 0.024
Identities = 30/90 (33%), Positives = 39/90 (43%), Gaps = 10/90 (11%)
Frame = +2
Query: 27 SPATVLPARPPSPPRASIPVTTSSPFINSN----LPAPLPPKSSI-SQPQLPKPI--SLP 79
SP + PP PP P SSP + P+P PP S + + P P P+ S P
Sbjct: 278 SPPPCVEPPPPPPPPCVEPPPPSSPAPHQTPYHPPPSPSPPPSPVYAYPSPPPPVYTSPP 457
Query: 80 PAPP---PSTRPEISSSGFGPAPNTLTEPV 106
P+P PS P + SS P P P+
Sbjct: 458 PSPVYAYPSPPPPVYSS--PPPPPVYEGPI 541
Score = 35.0 bits (79), Expect = 0.031
Identities = 25/83 (30%), Positives = 34/83 (40%), Gaps = 2/83 (2%)
Frame = +2
Query: 27 SPATVLPARPPSPPRASIPVTTSSPFINSNLPAPLPPKSSISQPQLPKP--ISLPPAPPP 84
+P + + PP PP N P P PP + + P P P S PP PPP
Sbjct: 5 TPPYCVRSPPPPPP---------------NSPPPPPPPAPVFSPPPPVPYYYSSPP-PPP 136
Query: 85 STRPEISSSGFGPAPNTLTEPVW 107
+ P P P++ T PV+
Sbjct: 137 AHSPPPPPXSPPPPPHSPTPPVY 205
Score = 34.7 bits (78), Expect = 0.041
Identities = 28/83 (33%), Positives = 32/83 (37%), Gaps = 2/83 (2%)
Frame = +2
Query: 25 YASPATVLPARPPSPPRASIPVTTSSPF--INSNLPAPLPPKSSISQPQLPKPISLPPAP 82
Y+SP PA P PP S P SP + L P PP + P P PP+P
Sbjct: 113 YSSPPPP-PAHSPPPPPXSPPPPPHSPTPPVYPYLSPPPPP--PVHSPPPPVYSPPPPSP 283
Query: 83 PPSTRPEISSSGFGPAPNTLTEP 105
PP P P P EP
Sbjct: 284 PPCVEPP------PPPPPPCVEP 334
Score = 33.9 bits (76), Expect = 0.070
Identities = 24/82 (29%), Positives = 31/82 (37%), Gaps = 4/82 (4%)
Frame = +2
Query: 28 PATVLPARPPSPPRASIPVTTSSPFINSNLPAPLPPKSSISQPQLPKPISLPP----APP 83
P + PP PP S P SP + +P PP P P P+ PP +PP
Sbjct: 98 PVPYYYSSPPPPPAHSPPPPPXSPPPPPH--SPTPPVYPYLSPPPPPPVHSPPPPVYSPP 271
Query: 84 PSTRPEISSSGFGPAPNTLTEP 105
P + P P P + P
Sbjct: 272 PPSPPPCVEPPPPPPPPCVEPP 337
Score = 33.5 bits (75), Expect = 0.091
Identities = 27/87 (31%), Positives = 33/87 (37%), Gaps = 14/87 (16%)
Frame = +2
Query: 33 PARPPSPPRASIPVTTSSP----FINSNLPAPL-----PPKSSISQPQLPKP-----ISL 78
P P PP PV + P + +S P P PP S P P P +S
Sbjct: 41 PPNSPPPPPPPAPVFSPPPPVPYYYSSPPPPPAHSPPPPPXSPPPPPHSPTPPVYPYLSP 220
Query: 79 PPAPPPSTRPEISSSGFGPAPNTLTEP 105
PP PP + P S P+P EP
Sbjct: 221 PPPPPVHSPPPPVYSPPPPSPPPCVEP 301
Score = 25.4 bits (54), Expect(2) = 1.6
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 15/66 (22%)
Frame = +2
Query: 33 PARPPSP----PRASIPVTTSSP----FINSNLPAPL---PPKSSISQPQLPKPISL--- 78
P+ PPSP P PV TS P + + P P+ PP + + +P +
Sbjct: 389 PSPPPSPVYAYPSPPPPVYTSPPPSPVYAYPSPPPPVYSSPPPPPVYEGPIPPVFGISYA 568
Query: 79 -PPAPP 83
PP PP
Sbjct: 569 SPPPPP 586
Score = 22.3 bits (46), Expect(2) = 1.6
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +1
Query: 75 PISLPPAPPPSTRPEISSSGF 95
P++L P PPP+ +SS F
Sbjct: 613 PLTLLPTPPPTFNTFLSSIKF 675
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.322 0.139 0.432
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,971,193
Number of Sequences: 36976
Number of extensions: 247133
Number of successful extensions: 7074
Number of sequences better than 10.0: 674
Number of HSP's better than 10.0 without gapping: 3461
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5084
length of query: 276
length of database: 9,014,727
effective HSP length: 95
effective length of query: 181
effective length of database: 5,502,007
effective search space: 995863267
effective search space used: 995863267
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.9 bits)
Lotus: description of TM0061.10