BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0052b.11
(434 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC77818 similar to GP|21644661|dbj|BAC01219. putative tubby prot... 786 0.0
TC77824 similar to GP|11067277|gb|AAG28805.1 unknown protein {Ar... 433 e-122
TC86703 similar to GP|18377640|gb|AAL66970.1 putative tubby prot... 407 e-114
TC88021 similar to GP|7635492|emb|CAB88665.1 tubby-like protein ... 374 e-104
TC78676 similar to GP|18252343|gb|AAL66203.1 putative Tub family... 279 2e-75
TC77823 similar to GP|11067277|gb|AAG28805.1 unknown protein {Ar... 272 2e-73
TC78677 similar to GP|18377640|gb|AAL66970.1 putative tubby prot... 147 9e-70
TC90967 similar to GP|16323400|gb|AAL15194.1 unknown protein {Ar... 129 2e-56
TC82140 similar to PIR|E96513|E96513 unknown protein 3155-1759 ... 210 1e-54
TC86942 homologue to GP|7635492|emb|CAB88665.1 tubby-like protei... 206 2e-53
AL383114 homologue to GP|7635492|emb| tubby-like protein {Cicer ... 124 5e-29
BG583821 homologue to GP|16323400|gb| unknown protein {Arabidops... 100 2e-22
AW691999 similar to GP|22654973|gb| At1g76900/F7O12_7 {Arabidops... 67 2e-11
BG647908 similar to GP|22654973|gb| At1g76900/F7O12_7 {Arabidops... 61 7e-10
BE998322 similar to GP|7635492|emb| tubby-like protein {Cicer ar... 53 2e-07
TC91391 weakly similar to GP|21427473|gb|AAM53249.1 actin-relate... 40 0.002
TC80014 weakly similar to GP|21536784|gb|AAM61116.1 unknown {Ara... 38 0.007
TC86329 similar to PIR|T07171|T07171 subtilisin-like proteinase ... 31 0.82
AW574185 weakly similar to GP|10177151|dbj gb|AAF31026.1~gene_id... 29 3.1
TC81570 similar to GP|18766642|gb|AAL79042.1 NIMA-related protei... 29 3.1
>TC77818 similar to GP|21644661|dbj|BAC01219. putative tubby protein {Oryza
sativa (japonica cultivar-group)}, partial (85%)
Length = 1982
Score = 786 bits (2031), Expect = 0.0
Identities = 392/434 (90%), Positives = 404/434 (92%)
Frame = +1
Query: 1 MSFRSIVRDVRDGFGSLSRRSFDVILPGHSRSKSRSSVHELHDQPLVIQSSRWASLPPEL 60
MSFRSIVRDVRDGFGSLSRRSF+V LPGH R KSRSSVHELHDQP VIQ+S WASLPPEL
Sbjct: 331 MSFRSIVRDVRDGFGSLSRRSFEVRLPGHQRGKSRSSVHELHDQPPVIQNSPWASLPPEL 510
Query: 61 LRDVIKRLETNESAWPGRKHVVACAAVCKSWREMCKEIVGSPEFCGKITFPVSLKQPGYR 120
LRDVIKRLE ES WPGRKHVVACAAVCKSWREMCKEIV S E+CGKITFPVSLKQPGYR
Sbjct: 511 LRDVIKRLEATESTWPGRKHVVACAAVCKSWREMCKEIVNSLEYCGKITFPVSLKQPGYR 690
Query: 121 DGPIQCFIKRDKSKLTYHLFLCLSPALLVENGKFLLSAKRTRRTTCTEYIISMDADNISR 180
DGPIQCFIKRDKSKLTYHLFLCLSPALLVENGKFLLSAKRTRRTTCTEY+ISMDADNISR
Sbjct: 691 DGPIQCFIKRDKSKLTYHLFLCLSPALLVENGKFLLSAKRTRRTTCTEYVISMDADNISR 870
Query: 181 SSSTYIGKLRSNFLGTKFIIYDTQPPYNNAQLSPPGRSRRFNSKKVSPKVPSGSYNIAQV 240
SS+TYIGKLRSNFLGTKFIIYDTQPPYNNAQL+PPGRSRRFNSKKVSPKVPSGSYNIAQV
Sbjct: 871 SSNTYIGKLRSNFLGTKFIIYDTQPPYNNAQLAPPGRSRRFNSKKVSPKVPSGSYNIAQV 1050
Query: 241 TYELNVLGTRGPRRMNCTMHSIPASSLDLGGSVPGKPELLPRALEDSFRSISFARSIDNS 300
TYELNVLGTRGPRRMNCTMHSIPASSL+ GG VPG+PEL+PR LEDSFRS+SFARSIDNS
Sbjct: 1051TYELNVLGTRGPRRMNCTMHSIPASSLEPGGLVPGQPELVPRNLEDSFRSLSFARSIDNS 1230
Query: 301 TEFSSARFSDIIGAGNEEEEEEGKERPLVLKNKSPRWHEQLQCWCLNFRGRVTVASVKNF 360
TEFSS RFSDI+GAGN E+EEEGKERPLVLKNKSPRWHEQLQCWCLNFRGRVTVASVKNF
Sbjct: 1231TEFSSCRFSDIMGAGN-EDEEEGKERPLVLKNKSPRWHEQLQCWCLNFRGRVTVASVKNF 1407
Query: 361 QLIAATQPASGGGAPPTGTGAAPPSQPPSDPDKIILQFGKVGKDMFTMDYRYPLSAFQAF 420
QLIAA QPA AP TG AP SD DKIILQFGKVGKDMFTMDYRYPLSAFQAF
Sbjct: 1408QLIAAAQPAP--VAPHAATGPAPSQPAQSDHDKIILQFGKVGKDMFTMDYRYPLSAFQAF 1581
Query: 421 AICLTSFDTKLACE 434
AICLTSFDTKLACE
Sbjct: 1582AICLTSFDTKLACE 1623
>TC77824 similar to GP|11067277|gb|AAG28805.1 unknown protein {Arabidopsis
thaliana}, partial (50%)
Length = 1132
Score = 433 bits (1113), Expect = e-122
Identities = 219/265 (82%), Positives = 235/265 (88%), Gaps = 4/265 (1%)
Frame = +3
Query: 1 MSFRSIVRDVRDGFGSLSRRSFDVILPGHS-RSKSRSSVHELHDQPLVIQSSRWASLPPE 59
MSFRSIVRDVRD FGSLSRRSFDV L GH R KS SV +LHDQPLVIQ+S WA+LPPE
Sbjct: 339 MSFRSIVRDVRDSFGSLSRRSFDVKLTGHHHRGKSHGSVQDLHDQPLVIQNSCWANLPPE 518
Query: 60 LLRDVIKRLETNESAWPGRKHVVACAAVCKSWREMCKEIVGSPEFCGKITFPVSLKQPGY 119
LL DVI+RLE +E+ WP RKHVVACA+VC+SWR MCK+IV SPEFCGK+TFPVSLKQPG
Sbjct: 519 LLFDVIRRLEESENTWPSRKHVVACASVCQSWRNMCKDIVRSPEFCGKLTFPVSLKQPGP 698
Query: 120 RDGPIQCFIKRDKSKLTYHLFLCLSPALLVENGKFLLSAKRTRRTTCTEYIISMDADNIS 179
RDG IQCFIKRDKS LTYHLFLCLSPALLVENGKFLLSAKRTRRTT TEY+ISMDADNIS
Sbjct: 699 RDGIIQCFIKRDKSNLTYHLFLCLSPALLVENGKFLLSAKRTRRTTYTEYVISMDADNIS 878
Query: 180 RSSSTYIGKLRSNFLGTKFIIYDTQPPYNNAQLSPPG---RSRRFNSKKVSPKVPSGSYN 236
RSS+TYIGKLRSNFLGTKFIIYDTQPP +A + PPG SRRF SKKVSPKVPSGSYN
Sbjct: 879 RSSNTYIGKLRSNFLGTKFIIYDTQPPCTSAHICPPGTGKTSRRF-SKKVSPKVPSGSYN 1055
Query: 237 IAQVTYELNVLGTRGPRRMNCTMHS 261
IAQVTYELNVLGTRGPR+M+C MHS
Sbjct: 1056IAQVTYELNVLGTRGPRKMHCIMHS 1130
>TC86703 similar to GP|18377640|gb|AAL66970.1 putative tubby protein
{Arabidopsis thaliana}, partial (84%)
Length = 1868
Score = 407 bits (1047), Expect = e-114
Identities = 223/440 (50%), Positives = 298/440 (67%), Gaps = 6/440 (1%)
Frame = +2
Query: 1 MSFRSIVRDVRDGFGSLSRRSFDVILPGHSRSKSRS--SVHELHDQPLVIQS----SRWA 54
MSFRS++ D R+ FDV RS+S+S V+ + D LVI S WA
Sbjct: 317 MSFRSMIMD---------RKGFDVKFGYGMRSRSQSHCDVNVIADGALVIDDGLSQSCWA 469
Query: 55 SLPPELLRDVIKRLETNESAWPGRKHVVACAAVCKSWREMCKEIVGSPEFCGKITFPVSL 114
++P ELLRDV+ R+E ++ WP RK+VVACA VC+SWRE+ KE+V P+ K+TFPV+L
Sbjct: 470 NMPHELLRDVLMRIEVSDDTWPTRKNVVACAGVCRSWREIVKELVKPPQLSSKLTFPVNL 649
Query: 115 KQPGYRDGPIQCFIKRDKSKLTYHLFLCLSPALLVENGKFLLSAKRTRRTTCTEYIISMD 174
KQPG R IQC+IKR++ Y+LFL L+ A ++GKFLL+A++ RR T T+YIIS++
Sbjct: 650 KQPGPRGSLIQCYIKRNRGDQIYYLFLSLNQA-STDDGKFLLAARKCRRATHTDYIISLN 826
Query: 175 ADNISRSSSTYIGKLRSNFLGTKFIIYDTQPPYNNAQLSPPGRSRRFNSKKVSPKVPSGS 234
D++SR SSTY+GKLRSNFLGTKF +YD PP + + R+ R + K+VSP+VP+G+
Sbjct: 827 LDDVSRRSSTYVGKLRSNFLGTKFTVYDAHPPVYGDRFA-KSRTTRLSLKQVSPRVPAGN 1003
Query: 235 YNIAQVTYELNVLGTRGPRRMNCTMHSIPASSLDLGGSVPGKPELLPRALEDSFRSISFA 294
Y I V+Y+LNVLG+RGPR M C M +IPAS+++ GG P + + L + D+ SI F
Sbjct: 1004YPIVHVSYDLNVLGSRGPRIMQCVMDAIPASAVEPGGVAPTQTQFL-HSRADTSPSIPFF 1180
Query: 295 RSIDNSTEFSSARFSDIIGAGNEEEEEEGKERPLVLKNKSPRWHEQLQCWCLNFRGRVTV 354
RS S R ++ A + +G+ LVLKNK+PRWHEQLQCWCLNF GRVTV
Sbjct: 1181RS-------KSTRSENLQSAAPLISQNDGE---LVLKNKAPRWHEQLQCWCLNFNGRVTV 1330
Query: 355 ASVKNFQLIAATQPASGGGAPPTGTGAAPPSQPPSDPDKIILQFGKVGKDMFTMDYRYPL 414
ASVKNFQL+A+ + G + +Q + +ILQFGKVGKD+FTMDY+YP+
Sbjct: 1331ASVKNFQLVASPK-----------NGVSEEAQ-----ENVILQFGKVGKDVFTMDYQYPI 1462
Query: 415 SAFQAFAICLTSFDTKLACE 434
SAF+AFAICL+SFDTK+ACE
Sbjct: 1463SAFEAFAICLSSFDTKIACE 1522
>TC88021 similar to GP|7635492|emb|CAB88665.1 tubby-like protein {Cicer
arietinum}, partial (81%)
Length = 1540
Score = 374 bits (959), Expect = e-104
Identities = 211/433 (48%), Positives = 287/433 (65%), Gaps = 10/433 (2%)
Frame = +3
Query: 1 MSFRSIVRDV---RDGFGSLSRRSFDVILPGHSRSKSRSSVHELHDQPLV----IQSSRW 53
MS RSIVR++ RDG G+ SRR + HS+ +++S H + D L IQ +W
Sbjct: 258 MSLRSIVRELKEMRDGIGNTSRRG---VASRHSQRRTKS--HIVPDITLTSLEPIQQGQW 422
Query: 54 ASLPPELLRDVIKRLETNESAWPGRKHVVACAAVCKSWREMCKEIVGSPEFCGKITFPVS 113
A++P ELL D+I+R+E E++WP R VV+CA+VCKSWR + +EIV +PE CG++TFP+S
Sbjct: 423 ANIPSELLLDIIRRVEETETSWPARAVVVSCASVCKSWRAVTQEIVQTPEECGRLTFPIS 602
Query: 114 LKQPGYRDGPIQCFIKRDKSKLTYHLFLCLSPALLVENGKFLLSAKRTRRTTCTEYIISM 173
LKQPG RD PIQCFI+RD+ Y L+ L P+ E K LL+AK+ RR T T++IIS+
Sbjct: 603 LKQPGPRDSPIQCFIRRDRETSAYLLYYGLVPSEN-ETDKLLLAAKKIRRATGTDFIISL 779
Query: 174 DADNISRSSSTYIGKLRSNFLGTKFIIYDTQPPYNNAQLSPPGRS-RRFNSKKVSPKVPS 232
AD+ SRSS+ Y+GKLRSNFLGTKF IYD+QPP+ A + P RS RRF+ ++VSP+VP+
Sbjct: 780 VADDFSRSSNAYVGKLRSNFLGTKFTIYDSQPPHG-AGVQPNSRSSRRFHPRQVSPRVPA 956
Query: 233 GSYNIAQVTYELNVLGTRGPRRMNCTMHSIPASSLDLGGSVPGKPELLPRALEDSFRSIS 292
+Y ++ V YELNVL TRGPRRMNC M+SIP S++ GG+ P P P+ +D F S+S
Sbjct: 957 CNYIVSTVAYELNVLRTRGPRRMNCIMNSIPVSAVQEGGNAP-TPTSFPQITDDHFCSVS 1133
Query: 293 F--ARSIDNSTEFSSARFSDIIGAGNEEEEEEGKERPLVLKNKSPRWHEQLQCWCLNFRG 350
+ D + S++ +++ + +G LVLKNKSPRWHEQLQCWCLNF+G
Sbjct: 1134AQEQKGKDPIGDLSNSTLTEL------SVQSQGPFESLVLKNKSPRWHEQLQCWCLNFKG 1295
Query: 351 RVTVASVKNFQLIAATQPASGGGAPPTGTGAAPPSQPPSDPDKIILQFGKVGKDMFTMDY 410
RVTVASVKNFQL+AA +P+ + PP++ +K+ILQF K K + Y
Sbjct: 1296RVTVASVKNFQLVAAVEPSH--------------NVPPAEQEKVILQFWKDWKRY--IYY 1427
Query: 411 RYPLSAFQAFAIC 423
PLS ++C
Sbjct: 1428GLPLSTLCLPSLC 1466
Score = 75.1 bits (183), Expect = 5e-14
Identities = 33/42 (78%), Positives = 38/42 (89%)
Frame = +1
Query: 393 KIILQFGKVGKDMFTMDYRYPLSAFQAFAICLTSFDTKLACE 434
++ FGK+GKD+FTMDYRYPLSAFQAFAICL+SFDTK ACE
Sbjct: 1381 RLSCSFGKIGKDIFTMDYRYPLSAFQAFAICLSSFDTKPACE 1506
>TC78676 similar to GP|18252343|gb|AAL66203.1 putative Tub family protein
{Pyrus communis}, partial (90%)
Length = 1227
Score = 279 bits (713), Expect = 2e-75
Identities = 157/322 (48%), Positives = 200/322 (61%)
Frame = +2
Query: 113 SLKQPGYRDGPIQCFIKRDKSKLTYHLFLCLSPALLVENGKFLLSAKRTRRTTCTEYIIS 172
S+KQPG R+ +QCFIKR++S TY+LFL L+ +L
Sbjct: 2 SVKQPGPRENLLQCFIKRNRSTQTYYLFLSLTSSL------------------------- 106
Query: 173 MDADNISRSSSTYIGKLRSNFLGTKFIIYDTQPPYNNAQLSPPGRSRRFNSKKVSPKVPS 232
D+ GKLRSNFLGTKF IYD QPP+ A+ + +R N K+VSPKVP+
Sbjct: 107 --GDD---------GKLRSNFLGTKFTIYDGQPPHAGAKFTKSRSTRLVNLKQVSPKVPT 253
Query: 233 GSYNIAQVTYELNVLGTRGPRRMNCTMHSIPASSLDLGGSVPGKPELLPRALEDSFRSIS 292
G+Y +A ++YELNVLG+RGPRRM+C M SIP+SS++ GG P + E +E F
Sbjct: 254 GNYPVAHISYELNVLGSRGPRRMHCVMDSIPSSSIEPGGVAPTQTEFSLNNIE-MFPLFP 430
Query: 293 FARSIDNSTEFSSARFSDIIGAGNEEEEEEGKERPLVLKNKSPRWHEQLQCWCLNFRGRV 352
F RS N +S ++G + K+ LVLKNK+PRWHEQLQCWCLNF GRV
Sbjct: 431 FFRSKSNRVVENSLS-GPLVG--------DKKDGMLVLKNKAPRWHEQLQCWCLNFHGRV 583
Query: 353 TVASVKNFQLIAATQPASGGGAPPTGTGAAPPSQPPSDPDKIILQFGKVGKDMFTMDYRY 412
T+ASVKNFQL+A+ + + G + DKIILQFGKVGKD+FTMD+RY
Sbjct: 584 TIASVKNFQLVASAENGTAG----------------PEHDKIILQFGKVGKDLFTMDFRY 715
Query: 413 PLSAFQAFAICLTSFDTKLACE 434
P+SAFQAFAICL+SFDTK+ACE
Sbjct: 716 PISAFQAFAICLSSFDTKIACE 781
>TC77823 similar to GP|11067277|gb|AAG28805.1 unknown protein {Arabidopsis
thaliana}, partial (27%)
Length = 818
Score = 272 bits (695), Expect = 2e-73
Identities = 138/184 (75%), Positives = 157/184 (85%), Gaps = 1/184 (0%)
Frame = +2
Query: 252 PRRMNCTMHSIPASSLDLGGSVPGKPELLPRALEDSFRSISFARSIDNSTEFSSARFSDI 311
PR+M+C MHSIP S+LD GGSVPG+PEL+ R+LEDSF SISF++S+D+S EFSSARFS+I
Sbjct: 23 PRKMHCIMHSIPNSALDAGGSVPGQPELIHRSLEDSFPSISFSKSLDHSIEFSSARFSEI 202
Query: 312 IGAGNEEEEEEGKERPLVLKNKSPRWHEQLQCWCLNFRGRVTVASVKNFQLIAATQPASG 371
G+ NE+++ GK RPLVLKNK PRWHEQLQCWCLNFRGRVTVASVKNFQLIA+TQP +
Sbjct: 203 GGSCNEDDD--GKMRPLVLKNKPPRWHEQLQCWCLNFRGRVTVASVKNFQLIASTQPPA- 373
Query: 372 GGAPPTGTGAAPPSQP-PSDPDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLTSFDTK 430
GA PSQP P + DKIILQFGKVGKDMFTMDYRYPLSAFQAFAICL+SFDTK
Sbjct: 374 --------GAPTPSQPAPPEHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTK 529
Query: 431 LACE 434
LACE
Sbjct: 530 LACE 541
>TC78677 similar to GP|18377640|gb|AAL66970.1 putative tubby protein
{Arabidopsis thaliana}, partial (53%)
Length = 1027
Score = 147 bits (371), Expect(2) = 9e-70
Identities = 68/124 (54%), Positives = 96/124 (76%)
Frame = +2
Query: 48 IQSSRWASLPPELLRDVIKRLETNESAWPGRKHVVACAAVCKSWREMCKEIVGSPEFCGK 107
++ S WA++P ELLR+V+ R+E +E WP RK+VVACA VC+SWR + KEIV PE
Sbjct: 338 LRQSCWANMPQELLREVLLRIEASEDTWPPRKNVVACAGVCRSWRVITKEIVKKPEISAM 517
Query: 108 ITFPVSLKQPGYRDGPIQCFIKRDKSKLTYHLFLCLSPALLVENGKFLLSAKRTRRTTCT 167
ITFP+S+KQPG R+ +QCFIKR++S TY+LFL L+ + L ++GKFLL+A++ +R TCT
Sbjct: 518 ITFPISVKQPGPRENLLQCFIKRNRSTQTYYLFLSLTSS-LGDDGKFLLAARKCKRPTCT 694
Query: 168 EYII 171
+YI+
Sbjct: 695 DYIM 706
Score = 134 bits (338), Expect(2) = 9e-70
Identities = 62/103 (60%), Positives = 82/103 (79%)
Frame = +3
Query: 172 SMDADNISRSSSTYIGKLRSNFLGTKFIIYDTQPPYNNAQLSPPGRSRRFNSKKVSPKVP 231
S+DAD++SR S+ Y+GKLRSNFLGTKF IYD QPP+ A+ + +R N K+VSPKVP
Sbjct: 708 SLDADDMSRGSNNYVGKLRSNFLGTKFTIYDGQPPHAGAKFTKSRSTRLVNLKQVSPKVP 887
Query: 232 SGSYNIAQVTYELNVLGTRGPRRMNCTMHSIPASSLDLGGSVP 274
+G+Y +A ++YELNVLG+RGPRRM+C M SIP+SS++ GG P
Sbjct: 888 TGNYPVAHISYELNVLGSRGPRRMHCVMDSIPSSSIEPGGVAP 1016
>TC90967 similar to GP|16323400|gb|AAL15194.1 unknown protein {Arabidopsis
thaliana}, partial (43%)
Length = 846
Score = 129 bits (324), Expect(2) = 2e-56
Identities = 61/108 (56%), Positives = 84/108 (77%)
Frame = +1
Query: 152 GKFLLSAKRTRRTTCTEYIISMDADNISRSSSTYIGKLRSNFLGTKFIIYDTQPPYNNAQ 211
GKFLL+AKR R T TEY IS+DAD++S+ S+ Y+GKL S+FLGT F IYD+QPP+N A+
Sbjct: 454 GKFLLAAKRYRCGTHTEYAISLDADDLSQGSNAYVGKLSSDFLGTNFTIYDSQPPHNGAK 633
Query: 212 LSPPGRSRRFNSKKVSPKVPSGSYNIAQVTYELNVLGTRGPRRMNCTM 259
S SRRF SK++SP+VP+G++ V+Y+ N+L +RGPRRM C++
Sbjct: 634 PSCARASRRFASKQISPQVPAGNFEAGDVSYKFNLLKSRGPRRMMCSL 777
Score = 108 bits (269), Expect(2) = 2e-56
Identities = 51/106 (48%), Positives = 73/106 (68%)
Frame = +3
Query: 53 WASLPPELLRDVIKRLETNESAWPGRKHVVACAAVCKSWREMCKEIVGSPEFCGKITFPV 112
W+++ P+LL ++IKR++ E WP R++VVACA VCK WR++ +EIV SP+ G ITFP
Sbjct: 159 WSTMLPDLLAEIIKRVDVAEEQWPHRQNVVACACVCKRWRDITREIVKSPQRNGTITFPS 338
Query: 113 SLKQPGYRDGPIQCFIKRDKSKLTYHLFLCLSPALLVENGKFLLSA 158
LKQPG RD P C IKR K T++L+L L+ + + GK +S+
Sbjct: 339 CLKQPGPRDLPHHCLIKRSKKTSTFYLYLALTSS-FSDKGKISISS 473
>TC82140 similar to PIR|E96513|E96513 unknown protein 3155-1759 [imported]
- Arabidopsis thaliana, partial (42%)
Length = 1120
Score = 210 bits (534), Expect = 1e-54
Identities = 109/249 (43%), Positives = 162/249 (64%), Gaps = 20/249 (8%)
Frame = +3
Query: 1 MSFRSIVRDVRD---GFGSLSRRSFDVILPGHSRSKSRSSVHELHDQPLVIQ-------- 49
M F+SIV+++++ G G++ RR + H +S + P+ +
Sbjct: 375 MPFKSIVKELKEMKEGIGNMYRRGVET---KHMHRHGKSHIAPECSSPISLSVPTTPSSL 545
Query: 50 ---------SSRWASLPPELLRDVIKRLETNESAWPGRKHVVACAAVCKSWREMCKEIVG 100
S+WA+LPPELL D+I+R+E +E++WP R+ +VACA+VC+ WR++ K +V
Sbjct: 546 SSSSSSSSSQSQWANLPPELLLDIIQRVEASETSWPSRRALVACASVCRLWRDITKGVVK 725
Query: 101 SPEFCGKITFPVSLKQPGYRDGPIQCFIKRDKSKLTYHLFLCLSPALLVENGKFLLSAKR 160
+ E CG ITFP+SLKQPG RD PIQCFIKR+++ Y L+L LSPAL + K LL+AK+
Sbjct: 726 TLEQCGWITFPISLKQPGPRDNPIQCFIKRERATSNYSLYLGLSPALSGDMSKLLLAAKK 905
Query: 161 TRRTTCTEYIISMDADNISRSSSTYIGKLRSNFLGTKFIIYDTQPPYNNAQLSPPGRSRR 220
RR TCTE++IS+ +D+ SR+++TYIGKLRSNFLGTKF I D PP+ ++ S ++
Sbjct: 906 IRRATCTEFLISLVSDDFSRANNTYIGKLRSNFLGTKFTILDGHPPHVSSLPSSCKLQQK 1085
Query: 221 FNSKKVSPK 229
+ K+V P+
Sbjct: 1086VHMKQVLPR 1112
>TC86942 homologue to GP|7635492|emb|CAB88665.1 tubby-like protein {Cicer
arietinum}, partial (48%)
Length = 863
Score = 206 bits (523), Expect = 2e-53
Identities = 108/207 (52%), Positives = 149/207 (71%), Gaps = 3/207 (1%)
Frame = +1
Query: 1 MSFRSIVRDVR---DGFGSLSRRSFDVILPGHSRSKSRSSVHELHDQPLVIQSSRWASLP 57
MSF+SIVR+++ +G GS+S+R D RSKS + +P IQ +WASLP
Sbjct: 238 MSFKSIVRELKGMKNGIGSISKRGSDT-KNWLCRSKSHVAPDVTPIEP--IQQGQWASLP 408
Query: 58 PELLRDVIKRLETNESAWPGRKHVVACAAVCKSWREMCKEIVGSPEFCGKITFPVSLKQP 117
PELL D+I+R+E +E++WP R VV CA+VCKSWR + KEI+ +P+ CG+ITFP+SLKQP
Sbjct: 409 PELLLDIIRRVEESETSWPARAVVVFCASVCKSWRSVTKEIIKTPQQCGRITFPISLKQP 588
Query: 118 GYRDGPIQCFIKRDKSKLTYHLFLCLSPALLVENGKFLLSAKRTRRTTCTEYIISMDADN 177
G RD PIQCFI+R++ T+ L+L L P+ E+ K LL+A++ RR T T+++IS+ D+
Sbjct: 589 GPRDYPIQCFIRRNRETSTFVLYLGLVPS-EHESNKLLLAARKIRRATGTDFVISLGTDD 765
Query: 178 ISRSSSTYIGKLRSNFLGTKFIIYDTQ 204
SR+S+ Y+GKLRSNF GTKF IYD Q
Sbjct: 766 FSRASNKYVGKLRSNFWGTKFAIYDNQ 846
>AL383114 homologue to GP|7635492|emb| tubby-like protein {Cicer arietinum},
partial (19%)
Length = 473
Score = 124 bits (312), Expect = 5e-29
Identities = 60/94 (63%), Positives = 71/94 (74%)
Frame = +3
Query: 341 LQCWCLNFRGRVTVASVKNFQLIAATQPASGGGAPPTGTGAAPPSQPPSDPDKIILQFGK 400
LQCWCLNF GRVTVASVKNFQL+A+ P+ + P++ +++ILQFGK
Sbjct: 3 LQCWCLNFMGRVTVASVKNFQLVASVDPSH--------------NVSPAEQERVILQFGK 140
Query: 401 VGKDMFTMDYRYPLSAFQAFAICLTSFDTKLACE 434
+GKD+FTMDY YPLSAFQAFAICLTSFDTK ACE
Sbjct: 141 IGKDIFTMDYSYPLSAFQAFAICLTSFDTKPACE 242
>BG583821 homologue to GP|16323400|gb| unknown protein {Arabidopsis
thaliana}, partial (20%)
Length = 388
Score = 100 bits (248), Expect(2) = 2e-22
Identities = 53/89 (59%), Positives = 58/89 (64%)
Frame = +1
Query: 346 LNFRGRVTVASVKNFQLIAATQPASGGGAPPTGTGAAPPSQPPSDPDKIILQFGKVGKDM 405
L GRVTVASVKNFQL+A + GG D + ++LQFGKVG D
Sbjct: 13 LELHGRVTVASVKNFQLVATVDQSQPGGK--------------GDEETVLLQFGKVGDDT 150
Query: 406 FTMDYRYPLSAFQAFAICLTSFDTKLACE 434
FTMDYR PLSAFQAFAICLTSF TKLACE
Sbjct: 151 FTMDYRQPLSAFQAFAICLTSFGTKLACE 237
Score = 23.9 bits (50), Expect(2) = 2e-22
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +2
Query: 342 QCWCLNF 348
QCWCLNF
Sbjct: 2 QCWCLNF 22
>AW691999 similar to GP|22654973|gb| At1g76900/F7O12_7 {Arabidopsis
thaliana}, partial (8%)
Length = 542
Score = 66.6 bits (161), Expect = 2e-11
Identities = 42/70 (60%), Positives = 46/70 (65%), Gaps = 7/70 (10%)
Frame = +3
Query: 1 MSFRSIVRDVRDGFGSLSRRSFDVILPGHSRSKSRS-------SVHELHDQPLVIQSSRW 53
MSFRSIVRDVRDGFGSLSRRSF+V LPGH R KSRS S +QP+ S+R
Sbjct: 312 MSFRSIVRDVRDGFGSLSRRSFEVRLPGHQRGKSRSFGP*VA*STSSYTEQPMG*PSTR- 488
Query: 54 ASLPPELLRD 63
S LLRD
Sbjct: 489 -SFFVMLLRD 515
Score = 30.4 bits (67), Expect = 1.4
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +2
Query: 58 PELLRDVIKRLETNES 73
PELLRDVIKRLE ES
Sbjct: 485 PELLRDVIKRLEATES 532
>BG647908 similar to GP|22654973|gb| At1g76900/F7O12_7 {Arabidopsis
thaliana}, partial (14%)
Length = 507
Score = 61.2 bits (147), Expect = 7e-10
Identities = 29/37 (78%), Positives = 29/37 (78%)
Frame = +1
Query: 118 GYRDGPIQCFIKRDKSKLTYHLFLCLSPALLVENGKF 154
G P QCFIKRDKSKLTYHLFLCLSPALLVE F
Sbjct: 352 GIEMDPFQCFIKRDKSKLTYHLFLCLSPALLVEMESF 462
Score = 48.9 bits (115), Expect = 4e-06
Identities = 28/52 (53%), Positives = 30/52 (56%)
Frame = +3
Query: 117 PGYRDGPIQCFIKRDKSKLTYHLFLCLSPALLVENGKFLLSAKRTRRTTCTE 168
PGYRDGPI F ++ L NGKFLLSAKRTRRTTCTE
Sbjct: 348 PGYRDGPIPVFHQKR*I*ADIPPLPLPQSCLAC*NGKFLLSAKRTRRTTCTE 503
Score = 26.9 bits (58), Expect(2) = 0.069
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +3
Query: 106 GKITFPVSLKQPGY 119
GKITFPVSLKQ Y
Sbjct: 36 GKITFPVSLKQVRY 77
Score = 26.6 bits (57), Expect(2) = 0.069
Identities = 11/16 (68%), Positives = 12/16 (74%)
Frame = +2
Query: 95 CKEIVGSPEFCGKITF 110
CKEIV S E+CGK F
Sbjct: 2 CKEIVNSLEYCGKDYF 49
>BE998322 similar to GP|7635492|emb| tubby-like protein {Cicer arietinum},
partial (17%)
Length = 294
Score = 53.1 bits (126), Expect = 2e-07
Identities = 33/76 (43%), Positives = 49/76 (64%), Gaps = 3/76 (3%)
Frame = +2
Query: 1 MSFRSIVRDVR---DGFGSLSRRSFDVILPGHSRSKSRSSVHELHDQPLVIQSSRWASLP 57
MSF+SIVR+++ +G GS+S+R D RSKS + +P IQ +WASLP
Sbjct: 74 MSFKSIVRELKGMKNGIGSISKRGSDT-KNWLCRSKSHVAPDVTPIEP--IQQGQWASLP 244
Query: 58 PELLRDVIKRLETNES 73
PELL D+I+++E +E+
Sbjct: 245 PELLLDIIRKVEESET 292
>TC91391 weakly similar to GP|21427473|gb|AAM53249.1 actin-related protein
8A {Arabidopsis thaliana}, partial (17%)
Length = 666
Score = 39.7 bits (91), Expect = 0.002
Identities = 28/92 (30%), Positives = 42/92 (45%)
Frame = +2
Query: 6 IVRDVRDGFGSLSRRSFDVILPGHSRSKSRSSVHELHDQPLVIQSSRWASLPPELLRDVI 65
++R + D S +RS + +S S SRS H H P + + SLPP++L +
Sbjct: 77 LLRKLCDSASSSIKRSTNTT---NSSSSSRSHQHHHHHAPSPL--GLFDSLPPDILLKIT 241
Query: 66 KRLETNESAWPGRKHVVACAAVCKSWREMCKE 97
+ L G KH VCKSWR + +
Sbjct: 242 RLL--------GPKHAAKLCLVCKSWRSLVSD 313
>TC80014 weakly similar to GP|21536784|gb|AAM61116.1 unknown {Arabidopsis
thaliana}, partial (25%)
Length = 1587
Score = 38.1 bits (87), Expect = 0.007
Identities = 23/60 (38%), Positives = 32/60 (53%)
Frame = +2
Query: 32 SKSRSSVHELHDQPLVIQSSRWASLPPELLRDVIKRLETNESAWPGRKHVVACAAVCKSW 91
+KSR E+ + L +Q+ WA LP ELL +I RL ++ V +AVCKSW
Sbjct: 110 AKSRREATEVKNDNLELQT--WADLPAELLEMIISRLALEDN--------VRASAVCKSW 259
>TC86329 similar to PIR|T07171|T07171 subtilisin-like proteinase (EC
3.4.21.-) 1 - tomato, partial (91%)
Length = 2671
Score = 31.2 bits (69), Expect = 0.82
Identities = 40/149 (26%), Positives = 64/149 (42%), Gaps = 10/149 (6%)
Frame = +2
Query: 127 FIKRDKSKLTYH-------LFLCLSPA-LLVENGKFLLSAKRTRRTTCTEYIISMDADNI 178
F K+ K +L+Y +F CL A LLV + +F ++ K+T+ T YII MD N+
Sbjct: 35 FKKKPKLQLSYWS*KMNMLIFKCLQMALLLVLSSRFTIAEKKTQHLKRT-YIIHMDKFNM 211
Query: 179 SRSSSTYIGKLRSNFLGTKFIIYDTQPPYNNAQLSPPGRSRRFNSKKVS--PKVPSGSYN 236
S ++ S+ + DT + G S R +++ K P
Sbjct: 212 PASFDDHLQWYDSSLKS----VSDTAETMYTYKHVAHGFSTRLTTQEADLLTKQPGILSV 379
Query: 237 IAQVTYELNVLGTRGPRRMNCTMHSIPAS 265
I V YEL+ T + T+ +P+S
Sbjct: 380 IPDVRYELHTTRTPEFLGLEKTITLLPSS 466
>AW574185 weakly similar to GP|10177151|dbj
gb|AAF31026.1~gene_id:K21P3.10~similar to unknown
protein {Arabidopsis thaliana}, partial (10%)
Length = 586
Score = 29.3 bits (64), Expect = 3.1
Identities = 18/44 (40%), Positives = 24/44 (53%)
Frame = +2
Query: 197 KFIIYDTQPPYNNAQLSPPGRSRRFNSKKVSPKVPSGSYNIAQV 240
+F+ Y T P+ AQ P SRR+ +KKV+P P IA V
Sbjct: 320 RFLEYIT--PHVPAQYLPKTSSRRWKTKKVTPSQPERQAAIAAV 445
>TC81570 similar to GP|18766642|gb|AAL79042.1 NIMA-related protein kinase
{Populus x canescens}, partial (20%)
Length = 895
Score = 29.3 bits (64), Expect = 3.1
Identities = 11/24 (45%), Positives = 14/24 (57%)
Frame = -3
Query: 331 KNKSPRWHEQLQCWCLNFRGRVTV 354
K SP WH +L WC +R R T+
Sbjct: 98 KGCSPSWHGRLTRWCSRYRKRFTL 27
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.319 0.135 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,278,862
Number of Sequences: 36976
Number of extensions: 228446
Number of successful extensions: 1764
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 1596
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1716
length of query: 434
length of database: 9,014,727
effective HSP length: 99
effective length of query: 335
effective length of database: 5,354,103
effective search space: 1793624505
effective search space used: 1793624505
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)
Lotus: description of TM0052b.11