TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0052a.3
         (242 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC88567 similar to SP|P42777|GBF4_ARATH G-box binding factor 4. ...   308  1e-84
BI310847 similar to GP|13346155|gb| bZIP protein DPBF3 {Arabidop...    69  2e-12
BE941734 similar to GP|7406677|emb| putative ripening-related bZ...    68  3e-12
TC82668 weakly similar to GP|13346157|gb|AAK19602.1 bZIP protein...    67  8e-12
TC93710 similar to PIR|T51273|T51273 promoter-binding factor-lik...    65  2e-11
TC86844 similar to GP|16797791|gb|AAL27150.1 bZIP transcription ...    50  6e-07
TC78431 similar to GP|16797791|gb|AAL27150.1 bZIP transcription ...    50  8e-07
AJ502380 similar to GP|13346159|gb| bZIP protein DPBF5 {Arabidop...    50  1e-06
TC80554 similar to GP|13430400|gb|AAK25822.1 bZip transcription ...    47  9e-06
TC81433 similar to GP|13430400|gb|AAK25822.1 bZip transcription ...    45  2e-05
TC87979 weakly similar to GP|10954097|gb|AAG25728.1 bZIP protein...    45  2e-05
TC77200 similar to GP|22597162|gb|AAN03468.1 bZIP transcription ...    45  3e-05
TC86402 homologue to GP|15148926|gb|AAK84890.1 TGA-type basic le...    45  3e-05
TC91337 weakly similar to GP|13365772|dbj|BAB39174. RISBZ4 {Oryz...    42  2e-04
TC85206 similar to GP|16580134|gb|AAK92215.1 bZIP transcription ...    42  2e-04
TC77479 similar to GP|19423874|gb|AAL87314.1 unknown protein {Ar...    41  4e-04
CB893389 similar to PIR|T48034|T480 bZIP transcription factor-li...    41  4e-04
TC77220 similar to GP|22597162|gb|AAN03468.1 bZIP transcription ...    41  4e-04
TC87112 similar to GP|2921823|gb|AAC04862.1| shoot-forming PKSF1...    41  5e-04
TC92484 similar to PIR|T08813|T08813 transcription factor STGA1 ...    41  5e-04

>TC88567 similar to SP|P42777|GBF4_ARATH G-box binding factor 4. [Mouse-ear
           cress] {Arabidopsis thaliana}, partial (32%)
          Length = 1250

 Score =  308 bits (789), Expect = 1e-84
 Identities = 178/255 (69%), Positives = 201/255 (78%), Gaps = 13/255 (5%)
 Frame = +1

Query: 1   MASSKMMMSSSKSLDHQQPSSPPPSSMPQFTTTNFIDHADSTLTDPYVPRTVDDVWQEII 60
           MASSK+M SS        PSSP  SS P FTT NF+D   S       PRTVDDVW+EI+
Sbjct: 139 MASSKLMPSSDP------PSSP--SSKPHFTTANFLDDQISLADAVATPRTVDDVWREIV 294

Query: 61  AGD----HHQCKEEIPDEMMTLEDFLVKAGAVDGDDEDDEVKMSMPLTERLSG--VFSLD 114
           AGD      +CKEEI DEMMTLEDFLVKAGAV+ ++E ++VKM++PL+E LSG  +FSLD
Sbjct: 295 AGDAISGDRECKEEISDEMMTLEDFLVKAGAVEDEEEGEDVKMTIPLSETLSGSGMFSLD 474

Query: 115 GSSFQGMEGVEGGSASVGGFGNG------VEVVEGT-RGKRGRPVVENLDKAAQQRQRRM 167
            SSFQG+E V+G   SV GFGNG      VE+VEG  RGKRGRPV+E LDKAAQQRQRRM
Sbjct: 475 -SSFQGIENVDG---SVIGFGNGNVNVNGVEMVEGGGRGKRGRPVMEQLDKAAQQRQRRM 642

Query: 168 IKNRESAARSRERKQAYQVELESLAVKLEEENDKLLKEKAERTKERFKQLMEEVIPVVEK 227
           IKNRESAARSRERKQAYQVELESLAVKLEEENDKL+KEKAER KERFKQLME+VIPVVE+
Sbjct: 643 IKNRESAARSRERKQAYQVELESLAVKLEEENDKLMKEKAERKKERFKQLMEKVIPVVEQ 822

Query: 228 RRPPRPLRRINSMQW 242
           RRPPR LRR+ S+QW
Sbjct: 823 RRPPRLLRRVRSLQW 867


>BI310847 similar to GP|13346155|gb| bZIP protein DPBF3 {Arabidopsis
           thaliana}, partial (30%)
          Length = 670

 Score = 68.9 bits (167), Expect = 2e-12
 Identities = 43/93 (46%), Positives = 54/93 (57%)
 Frame = +2

Query: 147 KRGRPVVENLDKAAQQRQRRMIKNRESAARSRERKQAYQVELESLAVKLEEENDKLLKEK 206
           KR  P  + ++K  ++RQ+RMIKNRESAARSR RKQAY  ELE    +LEEEN+ L K K
Sbjct: 266 KRSTPE-DMVEKTVERRQKRMIKNRESAARSRARKQAYTNELEIKVSRLEEENEMLRKRK 442

Query: 207 AERTKERFKQLMEEVIPVVEKRRPPRPLRRINS 239
                      +E ++P      P   LRRI S
Sbjct: 443 E----------LENMLPCAPIAEPKYQLRRIAS 511


>BE941734 similar to GP|7406677|emb| putative ripening-related bZIP protein
           {Vitis vinifera}, partial (18%)
          Length = 607

 Score = 68.2 bits (165), Expect = 3e-12
 Identities = 40/82 (48%), Positives = 56/82 (67%)
 Frame = +2

Query: 161 QQRQRRMIKNRESAARSRERKQAYQVELESLAVKLEEENDKLLKEKAERTKERFKQLMEE 220
           ++RQRRMIKNRESAARSR RKQAY +ELE+   KL+EEN++L K++ E  + +  Q+ E 
Sbjct: 8   ERRQRRMIKNRESAARSRARKQAYTMELEAEVAKLKEENEELQKKQEEIMELQKNQVKEM 187

Query: 221 VIPVVEKRRPPRPLRRINSMQW 242
           +    E +R  + LRR  +  W
Sbjct: 188 MNLQREVKR--KCLRRTQTGPW 247


>TC82668 weakly similar to GP|13346157|gb|AAK19602.1 bZIP protein DPBF4
           {Arabidopsis thaliana}, partial (32%)
          Length = 973

 Score = 66.6 bits (161), Expect = 8e-12
 Identities = 60/164 (36%), Positives = 78/164 (46%), Gaps = 1/164 (0%)
 Frame = +1

Query: 77  TLEDFLVKAGAVDGDDEDDEVKMSMPLTERLSGVFSLDGSSFQGMEGVEGGSASVGGFGN 136
           TLEDFLV+AG   G         S   T  L  + +    SFQ    +   S+       
Sbjct: 82  TLEDFLVQAGLFAG--------ASTSPTVGLDAMDTAIPQSFQPNTSLVSSSS------- 216

Query: 137 GVEVVEGTRGKRGRPVVENLDKAAQQRQRRMIKNRESAARSRERKQAYQVELESLAVKLE 196
            +  +   +  R R   +  +KA ++R RR IKNRESAARSR RKQAY  EL +    LE
Sbjct: 217 -ISSLSDAKPGRKRDAPDAYEKALERRLRRKIKNRESAARSRARKQAYHNELVTKVTLLE 393

Query: 197 EENDKLLKEKAERTKERFKQ-LMEEVIPVVEKRRPPRPLRRINS 239
           ++N +L KEK       F+Q L  E  P      P   LRRI+S
Sbjct: 394 QQNMQLKKEK------EFEQGLQPESSP-----EPKYRLRRISS 492


>TC93710 similar to PIR|T51273|T51273 promoter-binding factor-like protein -
           Arabidopsis thaliana, partial (30%)
          Length = 598

 Score = 65.5 bits (158), Expect = 2e-11
 Identities = 40/84 (47%), Positives = 52/84 (61%)
 Frame = +1

Query: 156 LDKAAQQRQRRMIKNRESAARSRERKQAYQVELESLAVKLEEENDKLLKEKAERTKERFK 215
           ++K  ++RQ+RMIKNRESAARSR RKQAY  ELE     LEEEN++L     +R  E   
Sbjct: 46  VEKTVERRQKRMIKNRESAARSRARKQAYTQELEIKVSHLEEENERL-----KRLHE--- 201

Query: 216 QLMEEVIPVVEKRRPPRPLRRINS 239
             +E V+P +    P   LRR +S
Sbjct: 202 --IERVLPSMPPPDPKHQLRRTSS 267


>TC86844 similar to GP|16797791|gb|AAL27150.1 bZIP transcription factor
           {Nicotiana tabacum}, partial (47%)
          Length = 1609

 Score = 50.4 bits (119), Expect = 6e-07
 Identities = 26/51 (50%), Positives = 34/51 (65%)
 Frame = +1

Query: 162 QRQRRMIKNRESAARSRERKQAYQVELESLAVKLEEENDKLLKEKAERTKE 212
           +R RRM+ NRESA RSR RKQA+  ELE+   +L  EN  LLK   + T++
Sbjct: 673 KRVRRMLSNRESARRSRRRKQAHLTELETQVSELRGENSSLLKRLTDVTQK 825


>TC78431 similar to GP|16797791|gb|AAL27150.1 bZIP transcription factor
           {Nicotiana tabacum}, partial (61%)
          Length = 1546

 Score = 50.1 bits (118), Expect = 8e-07
 Identities = 25/53 (47%), Positives = 35/53 (65%)
 Frame = +1

Query: 152 VVENLDKAAQQRQRRMIKNRESAARSRERKQAYQVELESLAVKLEEENDKLLK 204
           ++++ D    +R RRM+ NRESA RSR RKQA+  ELE+   +L  EN  L+K
Sbjct: 721 MIDSTDPTDVKRVRRMLSNRESARRSRRRKQAHLTELETQVSQLRGENSTLVK 879


>AJ502380 similar to GP|13346159|gb| bZIP protein DPBF5 {Arabidopsis
           thaliana}, partial (13%)
          Length = 472

 Score = 49.7 bits (117), Expect = 1e-06
 Identities = 26/39 (66%), Positives = 31/39 (78%)
 Frame = +2

Query: 148 RGRPVVENLDKAAQQRQRRMIKNRESAARSRERKQAYQV 186
           RGR  V  ++K  ++RQ+RMIKNRESAARSR RKQAY V
Sbjct: 359 RGRKCVP-VEKGVERRQKRMIKNRESAARSRARKQAYTV 472


>TC80554 similar to GP|13430400|gb|AAK25822.1 bZip transcription factor
           {Phaseolus vulgaris}, partial (52%)
          Length = 839

 Score = 46.6 bits (109), Expect = 9e-06
 Identities = 29/74 (39%), Positives = 43/74 (57%)
 Frame = +1

Query: 154 ENLDKAAQQRQRRMIKNRESAARSRERKQAYQVELESLAVKLEEENDKLLKEKAERTKER 213
           +NL    +++ RRM+ NRESA RSR RKQ    EL S  V L  EN +LL +K     E 
Sbjct: 283 QNLGLINERKHRRMVSNRESARRSRMRKQKQLDELWSQVVWLRNENHQLL-DKLNNFCET 459

Query: 214 FKQLMEEVIPVVEK 227
             ++++E + + E+
Sbjct: 460 HDKVVQENVQLKEQ 501


>TC81433 similar to GP|13430400|gb|AAK25822.1 bZip transcription factor
           {Phaseolus vulgaris}, partial (68%)
          Length = 774

 Score = 45.4 bits (106), Expect = 2e-05
 Identities = 26/60 (43%), Positives = 36/60 (59%)
 Frame = +2

Query: 161 QQRQRRMIKNRESAARSRERKQAYQVELESLAVKLEEENDKLLKEKAERTKERFKQLMEE 220
           +++ RRMI NRESA RSR RKQ +  EL S  +KL  EN  L+ +K     E    +++E
Sbjct: 272 ERKHRRMISNRESARRSRMRKQKHLDELWSQVMKLRTENHNLV-DKLNHVSESHDTVVQE 448


>TC87979 weakly similar to GP|10954097|gb|AAG25728.1 bZIP protein BZO2H2
           {Arabidopsis thaliana}, partial (49%)
          Length = 1346

 Score = 45.4 bits (106), Expect = 2e-05
 Identities = 23/62 (37%), Positives = 36/62 (57%)
 Frame = +2

Query: 151 PVVENLDKAAQQRQRRMIKNRESAARSRERKQAYQVELESLAVKLEEENDKLLKEKAERT 210
           P  ++ +    +R RR + NRESA RSR RKQA+  +LE    +L  EN  L K+  + +
Sbjct: 533 PCEQSTNPVDMKRLRRKVSNRESARRSRRRKQAHLADLEVQVEQLRLENASLFKQLTDAS 712

Query: 211 KE 212
           ++
Sbjct: 713 QQ 718


>TC77200 similar to GP|22597162|gb|AAN03468.1 bZIP transcription factor ATB2
           {Glycine max}, partial (84%)
          Length = 1481

 Score = 45.1 bits (105), Expect = 3e-05
 Identities = 30/76 (39%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
 Frame = +1

Query: 129 ASVGGFGNGVEVVEGTRGKRGRPVVENLDKAAQQRQR-RMIKNRESAARSRERKQAYQVE 187
           AS  G  +G  +++ +  +      E+L     QR+R RMI NRESA RSR RKQ +  +
Sbjct: 535 ASSSGTSSGSSLLQNSGSE------EDLQALMDQRKRKRMISNRESARRSRMRKQKHLDD 696

Query: 188 LESLAVKLEEENDKLL 203
           L S   KL +EN ++L
Sbjct: 697 LVSQVSKLRKENQEIL 744


>TC86402 homologue to GP|15148926|gb|AAK84890.1 TGA-type basic leucine
           zipper protein TGA2.2 {Phaseolus vulgaris}, partial
           (96%)
          Length = 1970

 Score = 44.7 bits (104), Expect = 3e-05
 Identities = 23/62 (37%), Positives = 39/62 (62%)
 Frame = +3

Query: 147 KRGRPVVENLDKAAQQRQRRMIKNRESAARSRERKQAYQVELESLAVKLEEENDKLLKEK 206
           +RG     + DK+ Q+  RR+ +NRE+A +SR RK+AY  +LES  +KL +   +L + +
Sbjct: 579 ERGESSERSKDKSDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRAR 758

Query: 207 AE 208
            +
Sbjct: 759 QQ 764


>TC91337 weakly similar to GP|13365772|dbj|BAB39174. RISBZ4 {Oryza sativa},
           partial (38%)
          Length = 1112

 Score = 42.4 bits (98), Expect = 2e-04
 Identities = 24/51 (47%), Positives = 33/51 (64%)
 Frame = +1

Query: 162 QRQRRMIKNRESAARSRERKQAYQVELESLAVKLEEENDKLLKEKAERTKE 212
           +RQRR   N ESA RSR RKQA+  ELE+   KL+ EN  L K+  + +++
Sbjct: 418 KRQRRKDSNCESARRSRWRKQAHLSELEAQVEKLKLENATLYKQFTDTSQQ 570


>TC85206 similar to GP|16580134|gb|AAK92215.1 bZIP transcription factor
           BZI-4 {Nicotiana tabacum}, partial (31%)
          Length = 1139

 Score = 42.4 bits (98), Expect = 2e-04
 Identities = 23/57 (40%), Positives = 38/57 (66%)
 Frame = +2

Query: 161 QQRQRRMIKNRESAARSRERKQAYQVELESLAVKLEEENDKLLKEKAERTKERFKQL 217
           +++++RM+ NRESA RSR RKQ    +L   A KL+ END+L +   + T+E + ++
Sbjct: 539 ERKRKRMLSNRESARRSRLRKQQQVEDLTGEAGKLKIENDRLAR-SIKATEEAYLKM 706


>TC77479 similar to GP|19423874|gb|AAL87314.1 unknown protein {Arabidopsis
            thaliana}, partial (21%)
          Length = 2241

 Score = 41.2 bits (95), Expect = 4e-04
 Identities = 30/93 (32%), Positives = 42/93 (44%), Gaps = 9/93 (9%)
 Frame = +3

Query: 119  QGMEGVEGGSASVGG---------FGNGVEVVEGTRGKRGRPVVENLDKAAQQRQRRMIK 169
            QG  G    S S+ G         FGNG    +  +       +  +  A  +R +R++ 
Sbjct: 1257 QGRPGQHSPSNSMDGSKTPEISMEFGNGEFSSQEMKKIMENDKLAEIAAADPKRAKRILA 1436

Query: 170  NRESAARSRERKQAYQVELESLAVKLEEENDKL 202
            NR+SAARS+ERK  Y  ELE     L+ E   L
Sbjct: 1437 NRQSAARSKERKMKYISELEQKVQTLQTETTTL 1535


>CB893389 similar to PIR|T48034|T480 bZIP transcription factor-like protein -
           Arabidopsis thaliana, partial (35%)
          Length = 724

 Score = 41.2 bits (95), Expect = 4e-04
 Identities = 20/42 (47%), Positives = 29/42 (68%)
 Frame = +1

Query: 161 QQRQRRMIKNRESAARSRERKQAYQVELESLAVKLEEENDKL 202
           +++++RMI NRESA RSRERKQ    + +  A +L  EN +L
Sbjct: 205 ERKRKRMISNRESARRSRERKQKLLEDYQDEANRLRNENRRL 330


>TC77220 similar to GP|22597162|gb|AAN03468.1 bZIP transcription factor ATB2
           {Glycine max}, partial (65%)
          Length = 1341

 Score = 41.2 bits (95), Expect = 4e-04
 Identities = 24/60 (40%), Positives = 35/60 (58%)
 Frame = +3

Query: 161 QQRQRRMIKNRESAARSRERKQAYQVELESLAVKLEEENDKLLKEKAERTKERFKQLMEE 220
           Q++++RMI NRESA RSR RKQ +  +L     +L  EN ++L      T +RF  +  E
Sbjct: 645 QRKRKRMISNRESARRSRMRKQKHLDDLAVQLSQLRNENQQIL-TSVNLTTQRFLAVESE 821


>TC87112 similar to GP|2921823|gb|AAC04862.1| shoot-forming PKSF1 {Paulownia
           kawakamii}, partial (30%)
          Length = 1379

 Score = 40.8 bits (94), Expect = 5e-04
 Identities = 38/125 (30%), Positives = 56/125 (44%), Gaps = 14/125 (11%)
 Frame = +1

Query: 92  DEDDEVKMSMPLTERLSGVFSLDGSSFQGME-GVEGG------------SASVGGFGNGV 138
           D D+ +  S      L  + S+D   F G+  G EG             S+S+ G   G+
Sbjct: 322 DSDESIGKSASEGRHLRSL-SVDSEFFDGLGFGGEGEKVEERKVSRHRYSSSMDGSEMGL 498

Query: 139 -EVVEGTRGKRGRPVVENLDKAAQQRQRRMIKNRESAARSRERKQAYQVELESLAVKLEE 197
            EV +G +       +  L     +R +R++ NR+SAARS+ERK  Y  ELE     L+ 
Sbjct: 499 FEVGDGVKKSMPAEKLAELALIDPKRAKRILANRQSAARSKERKTRYTSELERKVQTLQT 678

Query: 198 ENDKL 202
           E   L
Sbjct: 679 EATNL 693


>TC92484 similar to PIR|T08813|T08813 transcription factor STGA1 - soybean,
           partial (42%)
          Length = 989

 Score = 40.8 bits (94), Expect = 5e-04
 Identities = 26/71 (36%), Positives = 42/71 (58%)
 Frame = +1

Query: 143 GTRGKRGRPVVENLDKAAQQRQRRMIKNRESAARSRERKQAYQVELESLAVKLEEENDKL 202
           GT  K  +     +DK     QRR+ +NRE+A +SR RK+AY  +LES  +KL +     
Sbjct: 709 GTSNKYEQEANRPIDKI----QRRLAQNREAARKSRLRKKAYVQQLESSRLKLVQ----- 861

Query: 203 LKEKAERTKER 213
           L+++ ER +++
Sbjct: 862 LEQELERVRQQ 894


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.312    0.129    0.360 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,763,163
Number of Sequences: 36976
Number of extensions: 69280
Number of successful extensions: 705
Number of sequences better than 10.0: 93
Number of HSP's better than 10.0 without gapping: 693
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 700
length of query: 242
length of database: 9,014,727
effective HSP length: 93
effective length of query: 149
effective length of database: 5,575,959
effective search space: 830817891
effective search space used: 830817891
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 57 (26.6 bits)