BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0050.15
(95 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BI310814 similar to GP|18252889|gb|A putative lipase {Arabidopsi... 146 1e-36
BF635325 similar to GP|4204575|gb|A cytochrome b5 DIF-F {Petunia... 52 3e-08
BF003438 weakly similar to GP|22136796|gb| unknown protein {Arab... 50 1e-07
CA918228 weakly similar to GP|18478606|gb| repetitive proline ri... 48 6e-07
TC82109 similar to SP|P42735|CDI8_ARATH Cadmium induced protein ... 43 2e-05
TC88788 weakly similar to SP|P05790|FBOH_BOMMO Fibroin heavy cha... 40 1e-04
TC92318 similar to PIR|B85356|B85356 glycine-rich protein [impor... 38 7e-04
TC80770 similar to GP|4680336|gb|AAD27627.1| hypothetical protei... 37 0.001
TC81272 similar to PIR|T05225|T05225 extensin homolog F17I5.160 ... 36 0.003
TC78567 similar to PIR|T04143|T04143 CLB1 protein - tomato, part... 36 0.003
TC92156 similar to GP|15724296|gb|AAL06541.1 AT5g61660/k11j9_180... 36 0.003
BE997694 similar to GP|13646986|db DNA-binding protein DF1 {Pisu... 35 0.006
BF636063 similar to GP|12597888|gb| unknown protein {Oryza sativ... 35 0.006
TC91327 similar to GP|22597168|gb|AAN03471.1 unknown protein {Gl... 34 0.008
TC79991 similar to GP|10177307|dbj|BAB10568. contains similarity... 34 0.011
TC86615 weakly similar to GP|8778409|gb|AAF79417.1| F16A14.5 {Ar... 34 0.011
TC81043 weakly similar to GP|6523547|emb|CAB62280.1 hydroxyproli... 34 0.011
TC85307 similar to GP|10798758|dbj|BAB16431. P-rich protein Nt-S... 34 0.011
AJ501489 similar to GP|17131181|dbj ORF_ID:alr2090~unknown prote... 33 0.018
TC87796 weakly similar to SP|P03211|EBN1_EBV EBNA-1 nuclear prot... 33 0.018
>BI310814 similar to GP|18252889|gb|A putative lipase {Arabidopsis thaliana},
partial (79%)
Length = 607
Score = 146 bits (369), Expect = 1e-36
Identities = 67/81 (82%), Positives = 71/81 (86%)
Frame = +2
Query: 14 GFGVGCGFGVGWGFGGMPLNLLGLGVGGGCGVGVGLGWGFGSAFGSKYRSSQIRFQGVEF 73
GFGVGCGFGVGWGFGGMPLN LGLG GGGCGVGVGLGWGFGSA+GS+YR S+I FQGVEF
Sbjct: 98 GFGVGCGFGVGWGFGGMPLNFLGLGAGGGCGVGVGLGWGFGSAYGSRYRLSRITFQGVEF 277
Query: 74 DSKEKGDSPPLSKPTPEVVRS 94
DSKEK DS LSK +PEV S
Sbjct: 278 DSKEKSDSMELSKSSPEVRNS 340
>BF635325 similar to GP|4204575|gb|A cytochrome b5 DIF-F {Petunia x hybrida},
partial (35%)
Length = 682
Score = 52.4 bits (124), Expect = 3e-08
Identities = 22/29 (75%), Positives = 23/29 (78%)
Frame = +3
Query: 20 GFGVGWGFGGMPLNLLGLGVGGGCGVGVG 48
GFGVGWGFGGMPLN LGLG G GC +G
Sbjct: 99 GFGVGWGFGGMPLNFLGLGAGVGCDKVLG 185
Score = 26.6 bits (57), Expect = 1.7
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +2
Query: 14 GFGVGCGFGVGWGFGGMPLNLLG 36
GFGVGC F GF + LLG
Sbjct: 80 GFGVGCWFWCWMGFRRYAIELLG 148
>BF003438 weakly similar to GP|22136796|gb| unknown protein {Arabidopsis
thaliana}, partial (71%)
Length = 710
Score = 50.1 bits (118), Expect = 1e-07
Identities = 25/59 (42%), Positives = 33/59 (55%), Gaps = 10/59 (16%)
Frame = +1
Query: 14 GFGVGCGFGVGWGFG---------GMPLNLLGLGVGGGCGVGVGLGWGFGSAFG-SKYR 62
GFG+G G G+G+G G G+P +G G G GCGVG+G G+G G +YR
Sbjct: 163 GFGIGAGCGLGFGIGLLGGVGFGPGIPGLQVGFGFGAGCGVGLGFGYGVGKGIAQDEYR 339
Score = 32.7 bits (73), Expect = 0.024
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +1
Query: 36 GLGVGGGCGVGVGLGWGFGSAFGSKYRSSQIRF 68
G G+G GCG+G G+G G FG Q+ F
Sbjct: 163 GFGIGAGCGLGFGIGLLGGVGFGPGIPGLQVGF 261
Score = 27.3 bits (59), Expect = 1.0
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +1
Query: 22 GVGWGFGGMPLNLLGLGVGGGCGVGVGLGWGFG 54
G+ W + N LG VG G G+G G G GFG
Sbjct: 106 GLLWKLPVLKSNNLGK-VGPGFGIGAGCGLGFG 201
Score = 24.3 bits (51), Expect = 8.5
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +1
Query: 11 FLSGFGVGCGFGVGWGFG 28
F +G GVG GFG G G G
Sbjct: 265 FGAGCGVGLGFGYGVGKG 318
>CA918228 weakly similar to GP|18478606|gb| repetitive proline rich protein
{Oryza sativa}, partial (13%)
Length = 303
Score = 48.1 bits (113), Expect = 6e-07
Identities = 24/53 (45%), Positives = 29/53 (54%), Gaps = 8/53 (15%)
Frame = +2
Query: 14 GFGVGCGFGVGWGF--------GGMPLNLLGLGVGGGCGVGVGLGWGFGSAFG 58
G G GCG G+G+G GG P N L L G G G G+G+G+GFG G
Sbjct: 143 GAGFGCGAGIGFGLLGGFGYGGGGGPFNHLNLVFGLGMGCGLGIGYGFGQGIG 301
Score = 30.4 bits (67), Expect = 0.12
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2
Query: 33 NLLGLGVGGGCGVGVGLGWGFGSAFG 58
+LLG G G G G G G+G+G FG
Sbjct: 122 SLLGPGFGAGFGCGAGIGFGLLGGFG 199
>TC82109 similar to SP|P42735|CDI8_ARATH Cadmium induced protein AS8.
[Mouse-ear cress] {Arabidopsis thaliana}, partial (49%)
Length = 530
Score = 42.7 bits (99), Expect = 2e-05
Identities = 22/42 (52%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +3
Query: 14 GFGVGCGFGVGWGFGGMPLNLLGLGVGGGCGVGVGL-GWGFG 54
GFGVGCG G G GFG + +G G G G VG+ L G+G G
Sbjct: 168 GFGVGCGVGWGPGFGPEVVGYVGAGCGVGFNVGITLVGFGIG 293
Score = 27.7 bits (60), Expect = 0.77
Identities = 11/17 (64%), Positives = 13/17 (75%)
Frame = +3
Query: 36 GLGVGGGCGVGVGLGWG 52
G+G G GCGVG G G+G
Sbjct: 162 GMGFGVGCGVGWGPGFG 212
Score = 25.8 bits (55), Expect = 2.9
Identities = 11/19 (57%), Positives = 12/19 (62%)
Frame = +3
Query: 36 GLGVGGGCGVGVGLGWGFG 54
G G G GVG G+GWG G
Sbjct: 150 GAFYGMGFGVGCGVGWGPG 206
Score = 25.4 bits (54), Expect = 3.8
Identities = 11/17 (64%), Positives = 12/17 (69%)
Frame = +3
Query: 38 GVGGGCGVGVGLGWGFG 54
G+G G G GVG G GFG
Sbjct: 162 GMGFGVGCGVGWGPGFG 212
Score = 24.6 bits (52), Expect = 6.5
Identities = 10/17 (58%), Positives = 11/17 (63%)
Frame = +3
Query: 42 GCGVGVGLGWGFGSAFG 58
G G GVG G G+G FG
Sbjct: 162 GMGFGVGCGVGWGPGFG 212
>TC88788 weakly similar to SP|P05790|FBOH_BOMMO Fibroin heavy chain
precursor (Fib-H) (H-fibroin). [Silk moth] {Bombyx
mori}, partial (2%)
Length = 782
Score = 40.4 bits (93), Expect = 1e-04
Identities = 23/50 (46%), Positives = 25/50 (50%)
Frame = +3
Query: 10 LFLSGFGVGCGFGVGWGFGGMPLNLLGLGVGGGCGVGVGLGWGFGSAFGS 59
L L G G+G G G+G G GG G G G G G G G G G S GS
Sbjct: 153 LDLGGVGIGLGAGLGLGLGG------GGGAGSGAGAGSGSGSGSASTSGS 284
Score = 38.9 bits (89), Expect = 3e-04
Identities = 26/64 (40%), Positives = 27/64 (41%)
Frame = +3
Query: 16 GVGCGFGVGWGFGGMPLNLLGLGVGGGCGVGVGLGWGFGSAFGSKYRSSQIRFQGVEFDS 75
GVG G G G LGLG+GGG G G G G G GS GS S G
Sbjct: 165 GVGIGLGAG----------LGLGLGGGGGAGSGAGAGSGSGSGSASTSGSGSGSGSSGAG 314
Query: 76 KEKG 79
E G
Sbjct: 315 SEAG 326
Score = 32.7 bits (73), Expect = 0.024
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +3
Query: 29 GMPLNLLGLGVGGGCGVGVGLGWGFGSAFGS 59
G+ L +G+G+G G G+G+G G G GS G+
Sbjct: 150 GLDLGGVGIGLGAGLGLGLGGGGGAGSGAGA 242
>TC92318 similar to PIR|B85356|B85356 glycine-rich protein [imported] -
Arabidopsis thaliana, partial (78%)
Length = 421
Score = 37.7 bits (86), Expect = 7e-04
Identities = 24/55 (43%), Positives = 25/55 (44%)
Frame = +2
Query: 10 LFLSGFGVGCGFGVGWGFGGMPLNLLGLGVGGGCGVGVGLGWGFGSAFGSKYRSS 64
L L G G+G G GVG G GG G G G G G G G GS S SS
Sbjct: 197 LDLGGLGIGLGAGVGLGIGG----------GSGSGAGAGAGSGSGSXPLSSSSSS 331
Score = 33.1 bits (74), Expect = 0.018
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +2
Query: 29 GMPLNLLGLGVGGGCGVGVGLGWGFGSAFGS 59
G+ L LG+G+G G G+G+G G G G+ G+
Sbjct: 194 GLDLGGLGIGLGAGVGLGIGGGSGSGAGAGA 286
Score = 30.8 bits (68), Expect = 0.091
Identities = 19/57 (33%), Positives = 25/57 (43%)
Frame = +2
Query: 23 VGWGFGGMPLNLLGLGVGGGCGVGVGLGWGFGSAFGSKYRSSQIRFQGVEFDSKEKG 79
+G GG+ + GLG G G G+G G G G G+ GS S + S G
Sbjct: 191 LGLDLGGLGI---GLGAGVGLGIGGGSGSGAGAGAGSGSGSXPLSSSSSSSSSSSSG 352
>TC80770 similar to GP|4680336|gb|AAD27627.1| hypothetical protein {Oryza
sativa subsp. indica} [Oryza sativa (indica
cultivar-group)], partial (7%)
Length = 507
Score = 37.0 bits (84), Expect = 0.001
Identities = 23/47 (48%), Positives = 25/47 (52%), Gaps = 5/47 (10%)
Frame = +1
Query: 18 GCGFGVGWGFGGMPLNLL-----GLGVGGGCGVGVGLGWGFGSAFGS 59
GCG G G G GG N++ G G GGGC G G G G GS GS
Sbjct: 49 GCGGGCGGGCGGGCGNIVKSGGCGGGCGGGC--GAGCGGGCGSMVGS 183
Score = 32.0 bits (71), Expect = 0.041
Identities = 20/42 (47%), Positives = 20/42 (47%), Gaps = 5/42 (11%)
Frame = +1
Query: 14 GFGVGCGFGVG-----WGFGGMPLNLLGLGVGGGCGVGVGLG 50
G G GCG G G G GG G G GGGCG VG G
Sbjct: 61 GCGGGCGGGCGNIVKSGGCGGGCGGGCGAGCGGGCGSMVGSG 186
>TC81272 similar to PIR|T05225|T05225 extensin homolog F17I5.160 -
Arabidopsis thaliana, partial (3%)
Length = 757
Score = 35.8 bits (81), Expect = 0.003
Identities = 20/53 (37%), Positives = 25/53 (46%)
Frame = -1
Query: 14 GFGVGCGFGVGWGFGGMPLNLLGLGVGGGCGVGVGLGWGFGSAFGSKYRSSQI 66
G G G GWG P +G+GVG G G V GWG G +F +S +
Sbjct: 184 G*GAPLAPGPGWG---TPPGPVGIGVGRGTGPTVTGGWGLGQSFSQGLTTSHL 35
Score = 24.3 bits (51), Expect = 8.5
Identities = 18/57 (31%), Positives = 24/57 (41%), Gaps = 10/57 (17%)
Frame = -3
Query: 13 SGFGVGCGFGVGWGFGGMPLNLLGL--------GVGGGCGVGVGLG--WGFGSAFGS 59
+G G+ G+G G G GL G+ G G+ GLG G G+ GS
Sbjct: 434 AGSGMRSAAGLGGGLGSTGSTRAGLRGAGSTRAGLRGATGIRAGLGSARGTGTGLGS 264
>TC78567 similar to PIR|T04143|T04143 CLB1 protein - tomato, partial (53%)
Length = 1159
Score = 35.8 bits (81), Expect = 0.003
Identities = 34/87 (39%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
Frame = +3
Query: 6 SGFCLFLSGFG-VGCGFGVGWGFGGMPLNLLGLGVGGGCGVGVGLGWGFGSAFGSKYRSS 64
SG L SG G VG G G G G L+G G+G G G+ +G GFG AFGS S
Sbjct: 669 SGVGLVGSGIGLVGTGIGAGAG-------LVGSGIGAGAGL---VGSGFG-AFGSGL-SK 812
Query: 65 QIRFQGVEF----DSKEKGDSPPLSKP 87
+F G S+ G S P+ P
Sbjct: 813 AGKFMGRTITGHSGSRRSGSSTPVHNP 893
>TC92156 similar to GP|15724296|gb|AAL06541.1 AT5g61660/k11j9_180
{Arabidopsis thaliana}, partial (67%)
Length = 650
Score = 35.8 bits (81), Expect = 0.003
Identities = 21/47 (44%), Positives = 24/47 (50%)
Frame = +2
Query: 13 SGFGVGCGFGVGWGFGGMPLNLLGLGVGGGCGVGVGLGWGFGSAFGS 59
SGFG G G+G G G G G G G G G G G G+GS G+
Sbjct: 290 SGFGRGYGYGFGTGSGS------GSGSGYGYGSGGAHGGGYGSGSGN 412
Score = 33.9 bits (76), Expect = 0.011
Identities = 24/77 (31%), Positives = 36/77 (46%)
Frame = +2
Query: 16 GVGCGFGVGWGFGGMPLNLLGLGVGGGCGVGVGLGWGFGSAFGSKYRSSQIRFQGVEFDS 75
G G G+G G+G G + G G G G G G G G G++ G + + + +S
Sbjct: 293 GFGRGYGYGFGTGSGSGSGSGYGYGSGGAHGGGYGSGSGNSGGGGHGGGRTNNRSPS-ES 469
Query: 76 KEKGDSPPLSKPTPEVV 92
K K + P + K T +V
Sbjct: 470 KGKTNQP*VIKLTRTIV 520
Score = 30.4 bits (67), Expect = 0.12
Identities = 18/41 (43%), Positives = 19/41 (45%)
Frame = +2
Query: 14 GFGVGCGFGVGWGFGGMPLNLLGLGVGGGCGVGVGLGWGFG 54
GFG G G G G G+G G G G G G G G G G
Sbjct: 317 GFGTGSGSGSGSGYGYGSGGAHGGGYGSGSGNSGGGGHGGG 439
Score = 27.7 bits (60), Expect = 0.77
Identities = 15/46 (32%), Positives = 18/46 (38%)
Frame = +2
Query: 13 SGFGVGCGFGVGWGFGGMPLNLLGLGVGGGCGVGVGLGWGFGSAFG 58
SG G G + WG+G P G GWG+GS G
Sbjct: 191 SGSGHGPNWDYNWGWGSAP----------------GSGWGYGSGSG 280
Score = 26.9 bits (58), Expect = 1.3
Identities = 17/40 (42%), Positives = 18/40 (44%)
Frame = +2
Query: 13 SGFGVGCGFGVGWGFGGMPLNLLGLGVGGGCGVGVGLGWG 52
SG G G G+G G GG G G G G G G G G
Sbjct: 338 SGSGSGYGYGSGGAHGG------GYGSGSGNSGGGGHGGG 439
>BE997694 similar to GP|13646986|db DNA-binding protein DF1 {Pisum sativum},
partial (19%)
Length = 609
Score = 34.7 bits (78), Expect = 0.006
Identities = 19/50 (38%), Positives = 23/50 (46%)
Frame = -3
Query: 9 CLFLSGFGVGCGFGVGWGFGGMPLNLLGLGVGGGCGVGVGLGWGFGSAFG 58
C GF CG G+ G+ + G G GVGVG+G GFG G
Sbjct: 469 CTVTVGF*TCCGVGIA----GIGIGNGAAAAGNGTGVGVGVGVGFGVGVG 332
>BF636063 similar to GP|12597888|gb| unknown protein {Oryza sativa}, partial
(33%)
Length = 572
Score = 34.7 bits (78), Expect = 0.006
Identities = 25/77 (32%), Positives = 33/77 (42%), Gaps = 33/77 (42%)
Frame = +1
Query: 13 SGFGVGCGFGVGWG----FGGMPL------------------------NLLGLG-----V 39
+GFG+GCG G+G G G +P+ +L +G V
Sbjct: 172 TGFGIGCGVGIGVGRPLNLGAIPMLNQVMSATRGATDAFSGVSRHVNTSLRKIGAKNIEV 351
Query: 40 GGGCGVGVGLGWGFGSA 56
G GCGVG G G+G G A
Sbjct: 352 GVGCGVGFGHGFGAGLA 402
>TC91327 similar to GP|22597168|gb|AAN03471.1 unknown protein {Glycine max},
partial (70%)
Length = 738
Score = 34.3 bits (77), Expect = 0.008
Identities = 15/36 (41%), Positives = 18/36 (49%)
Frame = -2
Query: 23 VGWGFGGMPLNLLGLGVGGGCGVGVGLGWGFGSAFG 58
+G GG + G G G GCG G G +GF FG
Sbjct: 614 IGTAIGGGHTGI*GAGSGIGCGGGAGFSFGFSGCFG 507
Score = 33.1 bits (74), Expect = 0.018
Identities = 23/58 (39%), Positives = 25/58 (42%), Gaps = 5/58 (8%)
Frame = -2
Query: 6 SGFCLFLSGFGVGCGFGVGWGFGGMPLNLLG-LGVGGGCGVGVGLG----WGFGSAFG 58
+GF SG G GFG G G G L G LG G G LG +GF FG
Sbjct: 542 AGFSFGFSGCFGGSGFGSGGGGAGFSLGFSGSLGFSGSLGFSGSLGFSGSFGFSGFFG 369
Score = 32.7 bits (73), Expect = 0.024
Identities = 26/67 (38%), Positives = 30/67 (43%), Gaps = 1/67 (1%)
Frame = -2
Query: 5 HSGFCLFLSGFGVGCGFGVGWGFGGMPLNLLGLGVGGGCGVGVGLGWGFGSAF-GSKYRS 63
H+G SG G G G G +GF G G G GGG G G LG+ F GS S
Sbjct: 590 HTGI*GAGSGIGCGGGAGFSFGFSGC-FGGSGFGSGGG-GAGFSLGFSGSLGFSGSLGFS 417
Query: 64 SQIRFQG 70
+ F G
Sbjct: 416 GSLGFSG 396
Score = 28.1 bits (61), Expect = 0.59
Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = -2
Query: 20 GFGVGWGFGGMPLNLLGLGVGGGCGVGVGLGWGF-GSAFGS 59
G +G G G+ G+G GGG G G F GS FGS
Sbjct: 611 GTAIGGGHTGI*GAGSGIGCGGGAGFSFGFSGCFGGSGFGS 489
>TC79991 similar to GP|10177307|dbj|BAB10568. contains similarity to zinc
finger protein~gene_id:MDC12.23 {Arabidopsis thaliana},
partial (8%)
Length = 1023
Score = 33.9 bits (76), Expect = 0.011
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +1
Query: 28 GGMPLNLLGLGVGGGCGVGVGLGWGFGSAFGSKY 61
GG + G GVG G G G G G G+G +G Y
Sbjct: 706 GGRDADDWGYGVGNGGGAGYGYGAGYGDGYGDGY 807
Score = 30.8 bits (68), Expect = 0.091
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = +1
Query: 14 GFGVGCGFGVGWGFGGMPLNLLGLGVGGGCGVGVGLG 50
G+GVG G G G+G+G G G G G G G G
Sbjct: 730 GYGVGNGGGAGYGYGA--------GYGDGYGDGYGYG 816
Score = 29.6 bits (65), Expect = 0.20
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = +1
Query: 25 WGFGGMPLNLLGLGVGGGCGVGVGLGWGFGSAFGSKY 61
WG+G +G GGG G G G G+G G G Y
Sbjct: 727 WGYG--------VGNGGGAGYGYGAGYGDGYGDGYGY 813
>TC86615 weakly similar to GP|8778409|gb|AAF79417.1| F16A14.5 {Arabidopsis
thaliana}, partial (31%)
Length = 1278
Score = 33.9 bits (76), Expect = 0.011
Identities = 24/81 (29%), Positives = 34/81 (41%)
Frame = +2
Query: 13 SGFGVGCGFGVGWGFGGMPLNLLGLGVGGGCGVGVGLGWGFGSAFGSKYRSSQIRFQGVE 72
+G G G G G G G G+G G G G G+G G G+ G+ + G+
Sbjct: 653 TGTGTGTGTGTGTGTPTGTGTGTGMGTPTGTGTGTGIGTGTGTGTGTGTTTGGPNVFGIS 832
Query: 73 FDSKEKGDSPPLSKPTPEVVR 93
+ G+S S P E V+
Sbjct: 833 PTTSSSGNS-GFSDPNGEGVQ 892
>TC81043 weakly similar to GP|6523547|emb|CAB62280.1 hydroxyproline-rich
glycoprotein DZ-HRGP {Volvox carteri f. nagariensis},
partial (19%)
Length = 555
Score = 33.9 bits (76), Expect = 0.011
Identities = 20/41 (48%), Positives = 21/41 (50%)
Frame = -2
Query: 18 GCGFGVGWGFGGMPLNLLGLGVGGGCGVGVGLGWGFGSAFG 58
G G G G G GG+P GLG GG G GLG G FG
Sbjct: 308 GIGGGAGAGAGGLP----GLGGAGGFGGLPGLGGAGGGGFG 198
Score = 30.8 bits (68), Expect = 0.091
Identities = 19/42 (45%), Positives = 22/42 (52%)
Frame = -2
Query: 14 GFGVGCGFGVGWGFGGMPLNLLGLGVGGGCGVGVGLGWGFGS 55
G G G G G GG+P GLG GG G G+G G G G+
Sbjct: 389 GVGFGGAGDAGGGLGGLP----GLGGAGGLG-GIGGGAGAGA 279
Score = 29.6 bits (65), Expect = 0.20
Identities = 19/43 (44%), Positives = 20/43 (46%), Gaps = 8/43 (18%)
Frame = -2
Query: 12 LSGFGVGCGFGVGW--------GFGGMPLNLLGLGVGGGCGVG 46
L G G G G G G GFGG+P GLG GG G G
Sbjct: 314 LGGIGGGAGAGAGGLPGLGGAGGFGGLP----GLGGAGGGGFG 198
Score = 28.1 bits (61), Expect = 0.59
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = -2
Query: 18 GCGFGVGWGFGGMPLNLLGLGVGGGCGVGVGLGWGFGSAFG 58
G G G G G+P +G G G G G+G G G A G
Sbjct: 437 GAGVFSGIGNNGLPFGGVGFGGAGDAGGGLGGLPGLGGAGG 315
>TC85307 similar to GP|10798758|dbj|BAB16431. P-rich protein Nt-SubC29
{Nicotiana tabacum}, partial (97%)
Length = 815
Score = 33.9 bits (76), Expect = 0.011
Identities = 15/27 (55%), Positives = 19/27 (69%)
Frame = -2
Query: 28 GGMPLNLLGLGVGGGCGVGVGLGWGFG 54
G +PL +GLG+G G G+G G G GFG
Sbjct: 247 GHVPLEGVGLGLGFGFGLGFGFGVGFG 167
Score = 30.4 bits (67), Expect = 0.12
Identities = 14/27 (51%), Positives = 18/27 (65%)
Frame = -2
Query: 14 GFGVGCGFGVGWGFGGMPLNLLGLGVG 40
G G+G GFG+G+GFG +G GVG
Sbjct: 223 GLGLGFGFGLGFGFG------VGFGVG 161
Score = 30.0 bits (66), Expect = 0.16
Identities = 16/32 (50%), Positives = 18/32 (56%)
Frame = -2
Query: 18 GCGFGVGWGFGGMPLNLLGLGVGGGCGVGVGL 49
G G G+G+GFG LG G G G GVGL
Sbjct: 229 GVGLGLGFGFG--------LGFGFGVGFGVGL 158
Score = 30.0 bits (66), Expect = 0.16
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = -2
Query: 12 LSGFGVGCGFGVGWGFGGMPLNLLGLGVGGGCGV 45
L G G+G GFG G GF G GVG G G+
Sbjct: 235 LEGVGLGLGFGFGLGF--------GFGVGFGVGL 158
Score = 28.5 bits (62), Expect = 0.45
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -2
Query: 35 LGLGVGGGCGVGVGLGWGFG 54
LGLG G G G G G+G+G G
Sbjct: 220 LGLGFGFGLGFGFGVGFGVG 161
>AJ501489 similar to GP|17131181|dbj ORF_ID:alr2090~unknown protein {Nostoc
sp. PCC 7120}, partial (4%)
Length = 453
Score = 33.1 bits (74), Expect = 0.018
Identities = 17/37 (45%), Positives = 22/37 (58%)
Frame = -2
Query: 22 GVGWGFGGMPLNLLGLGVGGGCGVGVGLGWGFGSAFG 58
G+ G GG+ G+G+G G GVGVG+G G G G
Sbjct: 317 GIMDGIGGV-----GVGIGIGIGVGVGVGIGIGIGIG 222
Score = 32.0 bits (71), Expect = 0.041
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -2
Query: 12 LSGFGVGCGFGVGWGFGGMPLNLLGLGVGGGCGVGVG 48
+ G GVG G G+G +G+GVG G G+G+G
Sbjct: 302 IGGVGVGIGIGIG----------VGVGVGIGIGIGIG 222
>TC87796 weakly similar to SP|P03211|EBN1_EBV EBNA-1 nuclear protein.
[strain B95-8 Human herpesvirus 4] {Epstein-barr
virus}, partial (23%)
Length = 431
Score = 33.1 bits (74), Expect = 0.018
Identities = 19/41 (46%), Positives = 21/41 (50%)
Frame = +1
Query: 18 GCGFGVGWGFGGMPLNLLGLGVGGGCGVGVGLGWGFGSAFG 58
G G+G G G GG G G GG GVG G G G G +G
Sbjct: 13 GGGYGGGGGSGGGG----GGGAGGAHGVGYGSGGGTGGGYG 123
Score = 31.6 bits (70), Expect = 0.053
Identities = 19/45 (42%), Positives = 22/45 (48%)
Frame = +1
Query: 14 GFGVGCGFGVGWGFGGMPLNLLGLGVGGGCGVGVGLGWGFGSAFG 58
G+G G G G G G G + +G G GGG G G G G G G
Sbjct: 19 GYGGGGGSGGGGGGGAGGAHGVGYGSGGGTGGGYGGGSPGGGGGG 153
Score = 31.2 bits (69), Expect = 0.070
Identities = 20/46 (43%), Positives = 22/46 (47%)
Frame = +1
Query: 13 SGFGVGCGFGVGWGFGGMPLNLLGLGVGGGCGVGVGLGWGFGSAFG 58
SG G G G+G G GG G GGG G G G G G A+G
Sbjct: 94 SGGGTGGGYGGGSPGGG--------GGGGGSGGGGGGGGAHGGAYG 207
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.320 0.147 0.481
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,611,993
Number of Sequences: 36976
Number of extensions: 58458
Number of successful extensions: 946
Number of sequences better than 10.0: 162
Number of HSP's better than 10.0 without gapping: 564
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 765
length of query: 95
length of database: 9,014,727
effective HSP length: 71
effective length of query: 24
effective length of database: 6,389,431
effective search space: 153346344
effective search space used: 153346344
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 51 (24.3 bits)
Lotus: description of TM0050.15