BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0047b.8
(171 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC86321 similar to GP|3868853|dbj|BAA34247.1 GPI-anchored protei... 267 1e-72
TC78254 similar to GP|15795167|dbj|BAB03155. gene_id:MQC3.30~unk... 34 0.025
TC86556 similar to PIR|T07598|T07598 proline-rich protein GPP1 -... 30 0.62
TC86752 similar to GP|6729038|gb|AAF27034.1| unknown protein {Ar... 28 1.4
TC89729 similar to GP|2318131|gb|AAB66486.1| histone deacetylase... 28 1.8
TC76954 similar to PIR|A86312|A86312 hypothetical protein AAF998... 28 1.8
TC80361 weakly similar to PIR|G96818|G96818 F9K20.3 [imported] -... 28 1.8
TC76463 similar to PIR|C96814|C96814 hypothetical protein T30F21... 28 1.8
BF636939 similar to PIR|T48179|T481 hypothetical protein F7A7.10... 28 1.8
TC83709 homologue to PIR|S55344|S55344 outer envelope membrane p... 27 3.1
TC85296 weakly similar to GP|2505870|emb|CAA72908.1 hypothetical... 27 4.0
TC78044 homologue to SP|P25890|CATA_PEA Catalase (EC 1.11.1.6). ... 27 4.0
BF648417 similar to PIR|T05959|T05 1 3-beta-glucanase (EC 3.2.1.... 27 5.3
AJ548244 similar to GP|3900936|emb glucan endo-1 3-beta-d-glucos... 27 5.3
TC85289 similar to SP|Q9SQI2|GIGA_ARATH GIGANTEA protein. [Mouse... 27 5.3
BG644515 similar to PIR|T00665|T00 hypothetical protein F3I6.28 ... 27 5.3
BQ140584 similar to PIR|F86218|F8 protein F22O13.8 [imported] - ... 27 5.3
BG586099 weakly similar to PIR|D96730|D967 unknown protein F5A18... 27 5.3
AL377770 similar to PIR|T48853|T488 response reactor 3 [imported... 27 5.3
TC77632 homologue to GP|18086492|gb|AAL57699.1 AT4g30600/F17I23_... 26 6.9
>TC86321 similar to GP|3868853|dbj|BAA34247.1 GPI-anchored protein {Vigna
radiata}, partial (74%)
Length = 889
Score = 267 bits (683), Expect = 1e-72
Identities = 132/172 (76%), Positives = 148/172 (85%), Gaps = 1/172 (0%)
Frame = +2
Query: 1 MAFSLNQRFLLSSSLLLLILALSVSSSSSSSTFLSDAVFGSQAHTGRNLLQAKKGCSVNF 60
MA S+NQ+ L S LLLI+A+SVSS TFL + +F ++ TGR+LLQAKKGCSVNF
Sbjct: 152 MACSVNQQSFLLCSSLLLIMAVSVSSFHP--TFLPNTIFDAETLTGRHLLQAKKGCSVNF 325
Query: 61 EFLNYTIITSKCKGPSYPPKDCCGAFKEFACPYVDVLNDLTNDCASTMFSYINLYGKYPP 120
EFLNYTIITSKCKGP YPPK+CCG+FKEFACPY DV+NDLTNDCASTMFSYINLYG+YPP
Sbjct: 326 EFLNYTIITSKCKGPKYPPKECCGSFKEFACPYADVINDLTNDCASTMFSYINLYGRYPP 505
Query: 121 GLFAHECREGKEGLACPALPPSALADDTSSQVVHFPSLVLVLTAC-FLILLF 171
GLFA ECREGKEGLAC ALPPS ADDT++Q+VH PSLVLVLTAC FLILLF
Sbjct: 506 GLFASECREGKEGLACDALPPSVSADDTANQIVHTPSLVLVLTACIFLILLF 661
>TC78254 similar to GP|15795167|dbj|BAB03155. gene_id:MQC3.30~unknown
protein {Arabidopsis thaliana}, partial (51%)
Length = 1464
Score = 34.3 bits (77), Expect = 0.025
Identities = 27/77 (35%), Positives = 43/77 (55%)
Frame = -1
Query: 1 MAFSLNQRFLLSSSLLLLILALSVSSSSSSSTFLSDAVFGSQAHTGRNLLQAKKGCSVNF 60
+A LN+R L SLL++ L+L+ SSS+S+S+ S + S + ++ Q K ++F
Sbjct: 804 LANLLNRRTRLRLSLLMMSLSLNSSSSTSTSS--SSSTSASSPASRASVAQLKHLAPLSF 631
Query: 61 EFLNYTIITSKCKGPSY 77
TIIT C PS+
Sbjct: 630 FITVITIIT--CSFPSF 586
>TC86556 similar to PIR|T07598|T07598 proline-rich protein GPP1 - potato,
partial (24%)
Length = 1250
Score = 29.6 bits (65), Expect = 0.62
Identities = 22/69 (31%), Positives = 28/69 (39%)
Frame = +3
Query: 75 PSYPPKDCCGAFKEFACPYVDVLNDLTNDCASTMFSYINLYGKYPPGLFAHECREGKEGL 134
P Y P FK+ CP + L L F + +GK PP F H + GK
Sbjct: 507 PIYKPPVILPPFKKPPCPPLPTLPPLP----PKSFFHHPKFGKLPPKSFFHHPKYGK--- 665
Query: 135 ACPALPPSA 143
P LPP +
Sbjct: 666 -WPPLPPKS 689
>TC86752 similar to GP|6729038|gb|AAF27034.1| unknown protein {Arabidopsis
thaliana}, complete
Length = 1222
Score = 28.5 bits (62), Expect = 1.4
Identities = 19/32 (59%), Positives = 22/32 (68%), Gaps = 7/32 (21%)
Frame = -1
Query: 10 LLSSSLLLLILAL-------SVSSSSSSSTFL 34
LL+SS LLL+L L S SSSSSSS+FL
Sbjct: 166 LLASSFLLLLLLLLQIHRSISFSSSSSSSSFL 71
>TC89729 similar to GP|2318131|gb|AAB66486.1| histone deacetylase
{Arabidopsis thaliana}, partial (12%)
Length = 800
Score = 28.1 bits (61), Expect = 1.8
Identities = 19/44 (43%), Positives = 25/44 (56%)
Frame = -3
Query: 3 FSLNQRFLLSSSLLLLILALSVSSSSSSSTFLSDAVFGSQAHTG 46
F+L R LLS+S+ LS SSSSSS+ +VFG + G
Sbjct: 261 FTLRARELLSTSISKSRSHLSSLSSSSSSSLS*SSVFGGLSWNG 130
>TC76954 similar to PIR|A86312|A86312 hypothetical protein AAF99814.1
[imported] - Arabidopsis thaliana, partial (79%)
Length = 1047
Score = 28.1 bits (61), Expect = 1.8
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 6/57 (10%)
Frame = -3
Query: 11 LSSSLLLLILALSVSSSSSS------STFLSDAVFGSQAHTGRNLLQAKKGCSVNFE 61
LSS ++LLI + + SSSS S S+ ++HTG+ L K S+N +
Sbjct: 814 LSSMIILLIN*IKICSSSSPSHQP*ISALTSEGSLHIKSHTGKFFLGITKSLSLNLK 644
>TC80361 weakly similar to PIR|G96818|G96818 F9K20.3 [imported] -
Arabidopsis thaliana, partial (33%)
Length = 847
Score = 28.1 bits (61), Expect = 1.8
Identities = 14/45 (31%), Positives = 28/45 (62%)
Frame = -3
Query: 10 LLSSSLLLLILALSVSSSSSSSTFLSDAVFGSQAHTGRNLLQAKK 54
LL + +++++L L +SSSSSSS+F+ + S + + +K+
Sbjct: 230 LLRN*IVVVLLLLIISSSSSSSSFIVIVICTSSSSEATTIFYSKR 96
>TC76463 similar to PIR|C96814|C96814 hypothetical protein T30F21.10
[imported] - Arabidopsis thaliana, partial (49%)
Length = 1483
Score = 28.1 bits (61), Expect = 1.8
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = -3
Query: 6 NQRFLLSSSLLLLILALSVSSSSSSSTFLSDAVFGS 41
N F L +S+ LL+LA +++ + SSS L+ FGS
Sbjct: 992 NSFFNLDASISLLLLAATITLACSSSVKLAHLKFGS 885
>BF636939 similar to PIR|T48179|T481 hypothetical protein F7A7.100 -
Arabidopsis thaliana, partial (28%)
Length = 482
Score = 28.1 bits (61), Expect = 1.8
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +2
Query: 9 FLLSSSLLLLILALSVSSSSSSSTF 33
FLL LLLL+L ++ SSSSSSS +
Sbjct: 149 FLLLPLLLLLLLLVAPSSSSSSSNY 223
>TC83709 homologue to PIR|S55344|S55344 outer envelope membrane protein
OEP75 precursor - garden pea, partial (36%)
Length = 991
Score = 27.3 bits (59), Expect = 3.1
Identities = 15/44 (34%), Positives = 22/44 (49%)
Frame = +2
Query: 59 NFEFLNYTIITSKCKGPSYPPKDCCGAFKEFACPYVDVLNDLTN 102
N + LN ++ S P+D E+A PY+D +NDL N
Sbjct: 374 NLQGLNRSLTGSVTTSNFLNPQDDLAFKMEYAHPYLDGVNDLRN 505
>TC85296 weakly similar to GP|2505870|emb|CAA72908.1 hypothetical protein
{Arabidopsis thaliana}, partial (3%)
Length = 774
Score = 26.9 bits (58), Expect = 4.0
Identities = 19/66 (28%), Positives = 28/66 (41%)
Frame = +1
Query: 95 DVLNDLTNDCASTMFSYINLYGKYPPGLFAHECREGKEGLACPALPPSALADDTSSQVVH 154
+V ++L NDCA + + K PGLF + C + C SS +VH
Sbjct: 352 NVHHELANDCAFNITDMYSCKDKM*PGLFYYPC-----PILCNTYKKKKKKKFLSSFIVH 516
Query: 155 FPSLVL 160
+L L
Sbjct: 517 SHTLQL 534
>TC78044 homologue to SP|P25890|CATA_PEA Catalase (EC 1.11.1.6). [Garden
pea] {Pisum sativum}, partial (56%)
Length = 961
Score = 26.9 bits (58), Expect = 4.0
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +2
Query: 11 LSSSLLLLIL-ALSVSSSSSSSTFLSDAVFGSQAHTGRNLLQAKKGCSVNFEFLNY 65
LS ++L I +LS+SSS SS+FLS T +QA + F FL+Y
Sbjct: 35 LSHEIVLSIS*SLSISSSPPSSSFLSTI-------TNHGSIQAPSVQRLQFSFLDY 181
>BF648417 similar to PIR|T05959|T05 1 3-beta-glucanase (EC 3.2.1.-) Glu5 -
soybean (fragment), partial (63%)
Length = 657
Score = 26.6 bits (57), Expect = 5.3
Identities = 15/48 (31%), Positives = 24/48 (49%)
Frame = +1
Query: 47 RNLLQAKKGCSVNFEFLNYTIITSKCKGPSYPPKDCCGAFKEFACPYV 94
+N+ +A ++ + T I + G SYPPKD G F + A Y+
Sbjct: 517 QNIQKAISSANLQGQIKVSTAIDTTLIGKSYPPKD--GVFSDAASGYI 654
>AJ548244 similar to GP|3900936|emb glucan endo-1 3-beta-d-glucosidase {Cicer
arietinum}, partial (46%)
Length = 649
Score = 26.6 bits (57), Expect = 5.3
Identities = 15/48 (31%), Positives = 24/48 (49%)
Frame = -3
Query: 47 RNLLQAKKGCSVNFEFLNYTIITSKCKGPSYPPKDCCGAFKEFACPYV 94
+N+ +A ++ + T I + G SYPPKD G F + A Y+
Sbjct: 191 QNIQKAISSANLQGQIKVSTAIDTTLIGKSYPPKD--GVFSDAASGYI 54
>TC85289 similar to SP|Q9SQI2|GIGA_ARATH GIGANTEA protein. [Mouse-ear cress]
{Arabidopsis thaliana}, partial (74%)
Length = 3492
Score = 26.6 bits (57), Expect = 5.3
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 95 DVLNDLTNDCASTMFSYINLYGKYPPGLFAHEC 127
+V ++L NDCA + + K PGLF + C
Sbjct: 3330 NVHHELANDCAFNITDMYSCKDKM*PGLFYYPC 3428
>BG644515 similar to PIR|T00665|T00 hypothetical protein F3I6.28 -
Arabidopsis thaliana, partial (14%)
Length = 761
Score = 26.6 bits (57), Expect = 5.3
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 122 LFAHECREGKEGLACPALPPSALADDTSSQVVHFP 156
L AH+ R+G+ L P PP +D S +V P
Sbjct: 422 LVAHDLRQGEFVLQIPFYPPQQTIEDFSPKVSSSP 526
>BQ140584 similar to PIR|F86218|F8 protein F22O13.8 [imported] - Arabidopsis
thaliana, partial (7%)
Length = 515
Score = 26.6 bits (57), Expect = 5.3
Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = -2
Query: 22 LSVSSSSSSSTFLSDAVFGSQAHTGRNL-LQAKKGCSVNFEFLNYTIITSKCKGPSYPPK 80
LS +SSSS TFL+ + S+ +L + A SV ++ TS G S P K
Sbjct: 394 LSTIASSSSLTFLNCLLCSSERSNSFSLAMAAATNGSVELPSISSISSTSLTPGNSSPIK 215
Query: 81 -DCCG 84
CCG
Sbjct: 214 AACCG 200
>BG586099 weakly similar to PIR|D96730|D967 unknown protein F5A18.20
[imported] - Arabidopsis thaliana, partial (10%)
Length = 781
Score = 26.6 bits (57), Expect = 5.3
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2
Query: 8 RFLLSSSLLLLILALSVSSSSSSSTFLSDAV 38
R S L+ +LA S SSSSSSS L +++
Sbjct: 618 RIFFISWLIAAVLATSTSSSSSSSADLDESI 526
>AL377770 similar to PIR|T48853|T488 response reactor 3 [imported] -
Arabidopsis thaliana, partial (12%)
Length = 487
Score = 26.6 bits (57), Expect = 5.3
Identities = 17/29 (58%), Positives = 19/29 (64%)
Frame = -1
Query: 1 MAFSLNQRFLLSSSLLLLILALSVSSSSS 29
MAF L LLSS LLLL+ S+SSS S
Sbjct: 226 MAFLLLILLLLSSLLLLLLSMRSLSSSES 140
>TC77632 homologue to GP|18086492|gb|AAL57699.1 AT4g30600/F17I23_60
{Arabidopsis thaliana}, partial (75%)
Length = 2273
Score = 26.2 bits (56), Expect = 6.9
Identities = 18/29 (62%), Positives = 19/29 (65%)
Frame = -2
Query: 6 NQRFLLSSSLLLLILALSVSSSSSSSTFL 34
NQ F L+S LL ALS SSSSSSS L
Sbjct: 1105 NQPFFLASG-LLFFPALSSSSSSSSSLSL 1022
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.323 0.137 0.415
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,211,802
Number of Sequences: 36976
Number of extensions: 126045
Number of successful extensions: 1004
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 924
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 974
length of query: 171
length of database: 9,014,727
effective HSP length: 89
effective length of query: 82
effective length of database: 5,723,863
effective search space: 469356766
effective search space used: 469356766
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.8 bits)
Lotus: description of TM0047b.8