TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0045.10
         (257 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC86323 weakly similar to GP|15450363|gb|AAK96475.1 At1g16840/F1...   154  4e-38
TC91415 similar to GP|20856609|gb|AAM26675.1 At1g18620/F25I16_13...    29  1.6
BI308512 similar to SP|O24464|KAD_ Adenylate kinase (EC 2.7.4.3)...    28  2.7
TC93099 similar to GP|21593099|gb|AAM65048.1 unknown {Arabidopsi...    28  4.5
TC83640 similar to GP|14423550|gb|AAK62457.1 putative nucleoside...    28  4.5
TC92925                                                                27  7.7
TC79362 WD-repeat cell cycle regulatory protein                        27  7.7

>TC86323 weakly similar to GP|15450363|gb|AAK96475.1 At1g16840/F17F16.27
           {Arabidopsis thaliana}, partial (28%)
          Length = 1069

 Score =  154 bits (388), Expect = 4e-38
 Identities = 87/165 (52%), Positives = 107/165 (64%), Gaps = 20/165 (12%)
 Frame = +3

Query: 3   SAFFSKVKPLYRNPFPSSNSMAVCHRHRSSRATKATLTEIDA-------------EHEVT 49
           ++F SK K L+ NP   SN   +  RHRSSRAT   L EID              EHE+T
Sbjct: 138 ASFISKSKTLFTNP---SNFTTI--RHRSSRAT-GKLYEIDTSSSSSSQSLSSEGEHEMT 299

Query: 50  LKMFDDLIQRILVKKATPDWLPFLPGYSFWVPPRPSPSSVVHLAHRFNSSD-----QPQD 104
           LK+FDDLI RILVKKATPDWLPF+PG SFWVPPRP+PS+VVHL H+    +     +  +
Sbjct: 300 LKLFDDLIHRILVKKATPDWLPFVPGSSFWVPPRPTPSNVVHLVHKLTDDERQSPFENDE 479

Query: 105 ALNLESHHGWPDPNYFLQGNAPAHSGESGVELNLPE--EGTVKVK 147
           +L++ S  GWP  NYF++G    H G+SGVEL +PE  EG VKVK
Sbjct: 480 SLSISSLRGWPSSNYFIKGT--VHGGDSGVELKIPEGIEGPVKVK 608



 Score = 32.0 bits (71), Expect = 0.24
 Identities = 14/22 (63%), Positives = 19/22 (85%)
 Frame = +2

Query: 207 EGQFVQMEIPADTALVVVVELT 228
           EG++ QME+ AD ALV+V+ELT
Sbjct: 749 EGRWKQMEVRADAALVIVLELT 814


>TC91415 similar to GP|20856609|gb|AAM26675.1 At1g18620/F25I16_13
           {Arabidopsis thaliana}, partial (3%)
          Length = 705

 Score = 29.3 bits (64), Expect = 1.6
 Identities = 18/53 (33%), Positives = 27/53 (49%), Gaps = 2/53 (3%)
 Frame = +2

Query: 40  TEIDAEHEVTLKMFDDLIQRILVKKATP--DWLPFLPGYSFWVPPRPSPSSVV 90
           +EID     +LK    LI   + KK+TP  D    +  ++   P  PSP+SV+
Sbjct: 278 SEIDDSQSPSLKAIKQLISETVQKKSTPRLDEDETISEFATKAPEHPSPTSVL 436


>BI308512 similar to SP|O24464|KAD_ Adenylate kinase (EC 2.7.4.3) (ATP-AMP
           transphosphorylase). [Apricot] {Prunus armeniaca},
           partial (77%)
          Length = 778

 Score = 28.5 bits (62), Expect = 2.7
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -1

Query: 63  KKATPDWLPFLPGYSFWVPPRPSPSSVVHLAHR 95
           +K  P+WL +    S  + P  SPSS + + HR
Sbjct: 700 RKNWPNWLKYFISCSHSIDPMKSPSSCIMIDHR 602


>TC93099 similar to GP|21593099|gb|AAM65048.1 unknown {Arabidopsis
           thaliana}, partial (40%)
          Length = 703

 Score = 27.7 bits (60), Expect = 4.5
 Identities = 9/43 (20%), Positives = 21/43 (47%)
 Frame = -2

Query: 25  VCHRHRSSRATKATLTEIDAEHEVTLKMFDDLIQRILVKKATP 67
           +CH     + +   L+ +   H + L++ + LIQ++ +    P
Sbjct: 699 LCHNFHXCKKSNNLLSHLRGNHSIILRVLNSLIQQVPISTGCP 571


>TC83640 similar to GP|14423550|gb|AAK62457.1 putative nucleoside
           triphosphatase {Arabidopsis thaliana}, partial (12%)
          Length = 601

 Score = 27.7 bits (60), Expect = 4.5
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +3

Query: 83  RPSPSSVVHLAHRFNSSDQPQDALNLESHH 112
           RPSPSS +HL  R N+ ++   +   E  H
Sbjct: 78  RPSPSSAIHLMRRLNARNRVDSSNPNEMDH 167


>TC92925 
          Length = 864

 Score = 26.9 bits (58), Expect = 7.7
 Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = +1

Query: 8  KVKPLYR-NPFPSSNSMAVCHRHRSSR 33
          ++KPL+  NPF   N +A+ H   SSR
Sbjct: 55 ELKPLFSFNPFNKGNKLAIAHNINSSR 135


>TC79362 WD-repeat cell cycle regulatory protein
          Length = 1800

 Score = 26.9 bits (58), Expect = 7.7
 Identities = 17/64 (26%), Positives = 26/64 (40%), Gaps = 2/64 (3%)
 Frame = +3

Query: 81  PPRPSPSSVVHLAHRFNSSDQPQDALNLESHHGWPDPNYFLQGNAPAHSGESGV--ELNL 138
           PP PSP S+ H++   NS           +H+  P    +     P+ S       ++N 
Sbjct: 225 PPEPSPESLRHVSRMINS-----------NHYTSPSRTIYSDRFIPSRSASKFALFDINT 371

Query: 139 PEEG 142
           P EG
Sbjct: 372 PTEG 383


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.319    0.135    0.412 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,468,319
Number of Sequences: 36976
Number of extensions: 122489
Number of successful extensions: 749
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 741
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 747
length of query: 257
length of database: 9,014,727
effective HSP length: 94
effective length of query: 163
effective length of database: 5,538,983
effective search space: 902854229
effective search space used: 902854229
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)