BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0037a.7
(1027 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC77631 similar to PIR|T51579|T51579 cellulose synthase catalyti... 1579 0.0
TC85693 similar to PIR|T05351|T05351 cellulose synthase (EC 2.4.... 1290 0.0
TC86887 homologue to PIR|T10800|T10800 cellulose synthase (EC 2.... 1108 0.0
TC79809 homologue to GP|6446577|gb|AAD39534.2| cellulose synthas... 541 e-154
TC80467 homologue to GP|18875454|gb|AAK11588.2 cellulose synthas... 349 e-121
TC86229 homologue to GP|6446577|gb|AAD39534.2| cellulose synthas... 349 e-106
TC89697 similar to GP|4886756|gb|AAD32031.1| cellulose synthase ... 375 e-104
TC77822 weakly similar to GP|21536834|gb|AAM61166.1 unknown {Ara... 367 e-101
TC82247 similar to PIR|T10797|T10797 cellulose synthase (EC 2.4.... 367 e-101
BM780101 similar to GP|9622890|gb cellulose synthase-9 {Zea mays... 349 3e-96
BG644386 similar to PIR|T05351|T0 cellulose synthase (EC 2.4.1.-... 348 8e-96
TC87399 similar to GP|17381168|gb|AAL36396.1 putative cellulose ... 340 2e-93
TC90826 homologue to GP|6446577|gb|AAD39534.2| cellulose synthas... 310 4e-92
TC89444 similar to GP|12619788|gb|AAG60543.1 cellulose synthase-... 273 5e-81
TC79459 homologue to GP|6446577|gb|AAD39534.2| cellulose synthas... 276 4e-74
BE203030 homologue to GP|13925881|g cellulose synthase catalytic... 275 6e-74
TC86230 homologue to GP|6446577|gb|AAD39534.2| cellulose synthas... 265 1e-70
AW688489 similar to PIR|T10797|T10 cellulose synthase (EC 2.4.1.... 256 2e-68
TC90813 similar to GP|10177205|dbj|BAB10307. cellulose synthase ... 183 3e-65
BG452180 similar to PIR|T10800|T10 cellulose synthase (EC 2.4.1.... 182 4e-64
>TC77631 similar to PIR|T51579|T51579 cellulose synthase catalytic subunit
(IRX3) - Arabidopsis thaliana, partial (77%)
Length = 2694
Score = 1579 bits (4088), Expect = 0.0
Identities = 746/796 (93%), Positives = 777/796 (96%)
Frame = +1
Query: 232 ASSKINPYRMVIVARLVILAFFLRYRILNPVHDALGLWLTSIICEIWFAFSWILDQFPKW 291
ASSKINPYRMVIVARLVIL FFLRYR++NPVHDA+GLWLTSIICEIWFA SWILDQFPKW
Sbjct: 1 ASSKINPYRMVIVARLVILGFFLRYRLMNPVHDAMGLWLTSIICEIWFAISWILDQFPKW 180
Query: 292 FPIDRETYLDRLSIRYEREGEPNMLAPVDFFVSTVDPMKEPPLVTANTILSILAVDYPVD 351
+PIDRETYLDRLS+RYEREGEPNMLAPVD FVSTVDP+KEPPL TANT+LSILA+DYP+D
Sbjct: 181 YPIDRETYLDRLSLRYEREGEPNMLAPVDVFVSTVDPLKEPPLNTANTVLSILAMDYPID 360
Query: 352 KVSCYISDDGASMCTFEALSETAEFARKWVPFCKKFSIEPRAPEMYFSEKIDYLKDKVQP 411
K+SCYISDDGASMCTFEALSETAEFARKWVPFCKKF IEPRAPEMYFSEKIDYLKDKVQP
Sbjct: 361 KISCYISDDGASMCTFEALSETAEFARKWVPFCKKFLIEPRAPEMYFSEKIDYLKDKVQP 540
Query: 412 TFVKERRAMKREYEEFKVRINALVAKAQKVPPEGWIMQDGTPWPGNNTKDHPGMIQVFLG 471
TFVKERR+MKREYEEFKVRINALVAKAQKVP GWIMQDGTPWPGNNTKDHPGMIQVFLG
Sbjct: 541 TFVKERRSMKREYEEFKVRINALVAKAQKVPAGGWIMQDGTPWPGNNTKDHPGMIQVFLG 720
Query: 472 NSGGVDTEGNQLPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNAPFMLNLDCDHYI 531
+SGG D+EGNQLPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNAPFMLNLDCDHYI
Sbjct: 721 HSGGHDSEGNQLPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNAPFMLNLDCDHYI 900
Query: 532 NNSKAVREAMCFLMDPQTGKKVCYVQFPQRFDGIDTHDRYANRNTVFFDINMKGLDGIQG 591
NNSKAVREAMCFLMDPQTGKKVCYVQFPQRFDGID HDRYANRNTVFFDINMKGLDGIQG
Sbjct: 901 NNSKAVREAMCFLMDPQTGKKVCYVQFPQRFDGIDAHDRYANRNTVFFDINMKGLDGIQG 1080
Query: 592 PVYVGTGCVFRRQALYGYNPPKGPKRPKMVSCDCCPCFGSRKKLKHAKSDVNGEAASLKG 651
PVYVGTGCVFRRQALYGYNPPKGPKRPKMVSCDCCPCFG RKK+KHA +D NGEAA L+G
Sbjct: 1081 PVYVGTGCVFRRQALYGYNPPKGPKRPKMVSCDCCPCFGRRKKVKHAMNDANGEAAGLRG 1260
Query: 652 MDDDKEVLMSQMNFEKKFGQSSIFVTSTLMEEGGVPPSSSPAGMLKEAIHVISCGYEDKT 711
M+DDKE+LMSQMNFEKKFGQSSIFVTS LMEEGGVPPSSSPA LKEAIHVISCGYEDKT
Sbjct: 1261 MEDDKELLMSQMNFEKKFGQSSIFVTSVLMEEGGVPPSSSPASQLKEAIHVISCGYEDKT 1440
Query: 712 EWGLEVGWIYGSITEDILTGFKMHCRGWRSIYCMPRRAAFKGTAPINLSDRLNQVLRWAL 771
EWG+E+GWIYGSITEDILTGFKMHCRGWRSIYCMP+R AFKGTAPINLSDRLNQVLRWAL
Sbjct: 1441 EWGIELGWIYGSITEDILTGFKMHCRGWRSIYCMPKRVAFKGTAPINLSDRLNQVLRWAL 1620
Query: 772 GSIEIFFSHHCPLWYGYKEKKLKWLERFAYANTTIYPFTSIPLVAYCVLPAVCLLTDKFI 831
GSIEIFFSHHCPLWYG+KE KLKWLERFAYANTT+YPFTSIPLVAYC+LPAVCLLTDKFI
Sbjct: 1621 GSIEIFFSHHCPLWYGHKEGKLKWLERFAYANTTVYPFTSIPLVAYCILPAVCLLTDKFI 1800
Query: 832 MPPISTFAGLYFIALFSSIIATGVIELKWSGVSIEEWWRNEQFWVIGGVSAHLFAVIQGL 891
MPPISTFA LYF+ALFSSI+ATG++ELKWSGVSIEEWWRNEQFWVIGGVSAHLFAVIQGL
Sbjct: 1801 MPPISTFASLYFVALFSSIMATGILELKWSGVSIEEWWRNEQFWVIGGVSAHLFAVIQGL 1980
Query: 892 LKVLAGIDTNFTVTSKATDDEDFGELYAIKWTTLLIPPTTILIINIVGVVAGVSDAINNG 951
LKVLAGIDTNFTVTSKATDDE+FGELYAIKWTTLLIPPTTILIINIVGVVAG+SDAINNG
Sbjct: 1981 LKVLAGIDTNFTVTSKATDDEEFGELYAIKWTTLLIPPTTILIINIVGVVAGISDAINNG 2160
Query: 952 YQSWGPLFGKLFFSFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPF 1011
YQSWGPLFGKLFFSFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPF
Sbjct: 2161 YQSWGPLFGKLFFSFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPF 2340
Query: 1012 VLKTKGPDTKLCGINC 1027
V+KTKGPDTKLCGINC
Sbjct: 2341 VMKTKGPDTKLCGINC 2388
>TC85693 similar to PIR|T05351|T05351 cellulose synthase (EC 2.4.1.-)
catalytic chain RSW1 - Arabidopsis thaliana, partial
(79%)
Length = 3029
Score = 1290 bits (3337), Expect = 0.0
Identities = 614/878 (69%), Positives = 716/878 (80%), Gaps = 41/878 (4%)
Frame = +3
Query: 191 WKDRMDDWKLQQ------------------GNLGPEADEDTDASMLDEARQPLSRKVPIA 232
WK+R++ WKL+ G++ + M+D+ARQP+SR VPI+
Sbjct: 12 WKERVEGWKLKHEKNMVQMTGRYADGKSGGGDIEGTGSNGEELQMVDDARQPMSRIVPIS 191
Query: 233 SSKINPYRMVIVARLVILAFFLRYRILNPVHDALGLWLTSIICEIWFAFSWILDQFPKWF 292
SS++ PYR+VIV RL++L FFL+YR+ +PV DA LWLTS+ICEIWFAFSWILDQFPKW
Sbjct: 192 SSQLTPYRVVIVFRLIVLGFFLQYRVTHPVKDAYPLWLTSVICEIWFAFSWILDQFPKWS 371
Query: 293 PIDRETYLDRLSIRYEREGEPNMLAPVDFFVSTVDPMKEPPLVTANTILSILAVDYPVDK 352
PI+RETYL+RL+IRY+R+GEP+ LAPVD FVSTVDP+KEPP+VTANT+LSILAVDYPVDK
Sbjct: 372 PINRETYLERLAIRYDRDGEPSQLAPVDVFVSTVDPLKEPPIVTANTVLSILAVDYPVDK 551
Query: 353 VSCYISDDGASMCTFEALSETAEFARKWVPFCKKFSIEPRAPEMYFSEKIDYLKDKVQPT 412
VSCY+SDDG++M +FEALSETAEFA+ WVPFCKK SIEPRAPE YF +KIDYLKDKVQP+
Sbjct: 552 VSCYVSDDGSAMLSFEALSETAEFAKMWVPFCKKHSIEPRAPEFYFLQKIDYLKDKVQPS 731
Query: 413 FVKERRAMKREYEEFKVRINALVAKAQKVPPEGWIMQDGTPWPGNNTKDHPGMIQVFLGN 472
FVKERRAMKR+YEEFKVRINA VAKAQK+P EGW MQDGTPWPGNN +DHPGMIQVFLG+
Sbjct: 732 FVKERRAMKRQYEEFKVRINAYVAKAQKMPEEGWTMQDGTPWPGNNPRDHPGMIQVFLGH 911
Query: 473 SGGVDTEGNQLPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNAPFMLNLDCDHYIN 532
SGG+DT+GN+LPRLVYVSREKRPGFQHHKKAGAMNAL+RVSAVLTN ++LN+DCDHY N
Sbjct: 912 SGGLDTDGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNGAYLLNVDCDHYFN 1091
Query: 533 NSKAVREAMCFLMDPQTGKKVCYVQFPQRFDGIDTHDRYANRNTVFFDINMKGLDGIQGP 592
NSKA++EAMCF+MDP GKK CYVQFPQRFDGID HDRYANRN VFFDIN+KG DGIQGP
Sbjct: 1092 NSKALKEAMCFMMDPAYGKKTCYVQFPQRFDGIDLHDRYANRNIVFFDINLKGQDGIQGP 1271
Query: 593 VYVGTGCVFRRQALYGYNP--PKGPKRPKMVSCDCCPCFGSRKKLKHAKSDVNGEAASLK 650
VYVGTGC F RQALYGY+P + P ++ C+GSRKK K + +K
Sbjct: 1272 VYVGTGCCFNRQALYGYDPVLTEEDLEPNII---VKSCWGSRKKGKGGNKKYGDKKRGVK 1442
Query: 651 -------------------GMDDDKEVLMSQMNFEKKFGQSSIFVTSTLMEEGGVPPSSS 691
G DD++ +LMSQ + EK+FGQS +F+ +T ME+GG+PPS++
Sbjct: 1443 RTESTIPIFNMEDIEEGVEGYDDERSLLMSQKSLEKRFGQSPVFIAATFMEQGGLPPSTN 1622
Query: 692 PAGMLKEAIHVISCGYEDKTEWGLEVGWIYGSITEDILTGFKMHCRGWRSIYCMPRRAAF 751
+LKEAIHVISCGYEDKTEWG E+GWIYGS+TEDILTGFKMH RGW S+YCMP R AF
Sbjct: 1623 STTLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISVYCMPPRPAF 1802
Query: 752 KGTAPINLSDRLNQVLRWALGSIEIFFSHHCPLWYGYKEKKLKWLERFAYANTTIYPFTS 811
KG+APINLSDRLNQVLRWALGSIEIF S HCPLWYGY +++ L R AY NT IYPFTS
Sbjct: 1803 KGSAPINLSDRLNQVLRWALGSIEIFLSRHCPLWYGY-NGRMRPLMRLAYINTIIYPFTS 1979
Query: 812 IPLVAYCVLPAVCLLTDKFIMPPISTFAGLYFIALFSSIIATGVIELKWSGVSIEEWWRN 871
IPL+AYCVLPA CLLT+KFI+P IS FA ++FI LF+SI T ++EL+WSGV IE+WWRN
Sbjct: 1980 IPLLAYCVLPAFCLLTNKFIIPEISNFASMWFILLFTSIFTTSILELRWSGVGIEDWWRN 2159
Query: 872 EQFWVIGGVSAHLFAVIQGLLKVLAGIDTNFTVTSKATD-DEDFGELYAIKWTTLLIPPT 930
EQFWVIGG SAHLFAV QGLLKVLAGIDTNFTVTSKA D D DF ELY KWT+LLIPPT
Sbjct: 2160 EQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKANDEDGDFAELYVFKWTSLLIPPT 2339
Query: 931 TILIINIVGVVAGVSDAINNGYQSWGPLFGKLFFSFWVIVHLYPFLKGLMGRQNRTPTIV 990
T+LI+N++G+VAGVS AIN+GYQSWGPLFGKLFF+ WVI HLYPFLKGL+G+ NRTPTIV
Sbjct: 2340 TVLIVNLIGIVAGVSFAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGKSNRTPTIV 2519
Query: 991 VIWSVLLASIFSLLWVRIDPFVL-KTKGPDTKLCGINC 1027
++W+VLLASIFSLLWVRIDPF+ K CGINC
Sbjct: 2520 IVWAVLLASIFSLLWVRIDPFISDPNKSSSNSQCGINC 2633
>TC86887 homologue to PIR|T10800|T10800 cellulose synthase (EC 2.4.1.-)
catalytic chain celA2 - upland cotton (fragment), partial
(98%)
Length = 2463
Score = 1108 bits (2867), Expect = 0.0
Identities = 524/716 (73%), Positives = 602/716 (83%), Gaps = 37/716 (5%)
Frame = +3
Query: 349 PVDKVSCYISDDGASMCTFEALSETAEFARKWVPFCKKFSIEPRAPEMYFSEKIDYLKDK 408
P +KV+CY+SDDGASM F+ L+ET+EFAR+WVPFCKK+SIEPRAPE YF+EKIDYLKDK
Sbjct: 12 PCEKVTCYVSDDGASMLLFDCLAETSEFARRWVPFCKKYSIEPRAPEYYFNEKIDYLKDK 191
Query: 409 VQPTFVKERRAMKREYEEFKVRINALVAKAQKVPPEGWIMQDGTPWPGNNTKDHPGMIQV 468
V+PTFVKERR+MKREYEEFKV+INALVAKA K P EGW+MQDGTPWPGNNT+DHPGMIQV
Sbjct: 192 VEPTFVKERRSMKREYEEFKVKINALVAKALKKPEEGWVMQDGTPWPGNNTRDHPGMIQV 371
Query: 469 FLGNSGGVDTEGNQLPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNAPFMLNLDCD 528
+LG++G +D EG +LP+LVY+SREKRPG+ HHKKAGAMNALVRVSAVLTNAPFMLNLDCD
Sbjct: 372 YLGSAGALDVEGKELPKLVYISREKRPGYPHHKKAGAMNALVRVSAVLTNAPFMLNLDCD 551
Query: 529 HYINNSKAVREAMCFLMDPQTGKKVCYVQFPQRFDGIDTHDRYANRNTVFFDINMKGLDG 588
HYINNSKA+REAMCFLMDPQ GKK+CYVQFPQRFDGID HDRYANRNTVFFDINMKGLDG
Sbjct: 552 HYINNSKALREAMCFLMDPQLGKKLCYVQFPQRFDGIDRHDRYANRNTVFFDINMKGLDG 731
Query: 589 IQGPVYVGTGCVFRRQALYGYNPPKGPKRPKMVSCD-----CCPCFGSRKKLKHAKSDVN 643
IQGPVYVGTG VF RQALYGY+PP KRPKM +CD CC C GSRK KS N
Sbjct: 732 IQGPVYVGTGTVFNRQALYGYDPPVSEKRPKM-TCDCWPKWCCFCCGSRKTKSKKKSGTN 908
Query: 644 GEA-------------------------------ASLKGMDD-DKEVLMSQMNFEKKFGQ 671
G + L+G ++ +K LMSQ +FEK+FGQ
Sbjct: 909 GRSLFSRLYKKKKMGGKDYVRKGSGSMFDLEEIEEGLEGYEELEKSSLMSQKSFEKRFGQ 1088
Query: 672 SSIFVTSTLMEEGGVPPSSSPAGMLKEAIHVISCGYEDKTEWGLEVGWIYGSITEDILTG 731
S +F+ STLME GG+P ++ ++KEAIH ISCGYE+KT+WG E+GWIYGS+TEDILTG
Sbjct: 1089 SPVFIASTLMENGGLPEGTNTQSLVKEAIHNISCGYEEKTDWGKEIGWIYGSVTEDILTG 1268
Query: 732 FKMHCRGWRSIYCMPRRAAFKGTAPINLSDRLNQVLRWALGSIEIFFSHHCPLWYGYKEK 791
FKMHCRGW+S+YCMP+R AFKG+APINLSDRL+QVLRWALGS+EIF S HCPLWYGY
Sbjct: 1269 FKMHCRGWKSVYCMPKRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYGY-GG 1445
Query: 792 KLKWLERFAYANTTIYPFTSIPLVAYCVLPAVCLLTDKFIMPPISTFAGLYFIALFSSII 851
KLK+LER AY NT +YPFTSIPL+AYC +PAVCLLT KFI+P ++ A ++F+ALF SII
Sbjct: 1446 KLKYLERLAYTNTIVYPFTSIPLLAYCTIPAVCLLTGKFIIPTLTNLASVWFMALFISII 1625
Query: 852 ATGVIELKWSGVSIEEWWRNEQFWVIGGVSAHLFAVIQGLLKVLAGIDTNFTVTSKATDD 911
TGV+EL+WSGV+IE+WWRNEQFWVIGGVSAHLFAV QGLLKVLAG+DTNFTVT+KA DD
Sbjct: 1626 LTGVLELRWSGVAIEDWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGVDTNFTVTAKAADD 1805
Query: 912 EDFGELYAIKWTTLLIPPTTILIINIVGVVAGVSDAINNGYQSWGPLFGKLFFSFWVIVH 971
+FGELY KWTTLLIPPTT++I+NIVGVVAGVSDAIN+G SWGPLFGKLFF+FWVIVH
Sbjct: 1806 AEFGELYLFKWTTLLIPPTTLIILNIVGVVAGVSDAINSGSGSWGPLFGKLFFAFWVIVH 1985
Query: 972 LYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFVLKTKGPDTKLCGINC 1027
LYPFLKGLMG+QNRTPTIVV+WS+LLASIFSL+WVRIDPF+ K GP K CG+ C
Sbjct: 1986 LYPFLKGLMGKQNRTPTIVVLWSILLASIFSLIWVRIDPFLPKQTGPILKQCGVEC 2153
>TC79809 homologue to GP|6446577|gb|AAD39534.2| cellulose synthase catalytic
subunit {Gossypium hirsutum}, partial (29%)
Length = 1139
Score = 541 bits (1395), Expect = e-154
Identities = 251/315 (79%), Positives = 283/315 (89%), Gaps = 1/315 (0%)
Frame = +1
Query: 714 GLEVGWIYGSITEDILTGFKMHCRGWRSIYCMPRRAAFKGTAPINLSDRLNQVLRWALGS 773
G E+GWIYGS+TEDILTGFKMH RGWRSIYCMP+R AFKG+APINLSDRLNQVLRWALGS
Sbjct: 19 GTEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGS 198
Query: 774 IEIFFSHHCPLWYGYKEKKLKWLERFAYANTTIYPFTSIPLVAYCVLPAVCLLTDKFIMP 833
+EI FS HCP+WYGY + LKWLERFAY NTTIYP T+IPL+ YC LPAVCLLT+KFI+P
Sbjct: 199 VEILFSRHCPIWYGYGGR-LKWLERFAYINTTIYPVTAIPLLMYCTLPAVCLLTNKFIIP 375
Query: 834 PISTFAGLYFIALFSSIIATGVIELKWSGVSIEEWWRNEQFWVIGGVSAHLFAVIQGLLK 893
IS A ++FI+LF SI ATG++E++WSGV I+EWWRNEQFWVIGGVSAHLFAV QGLLK
Sbjct: 376 QISNLASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLK 555
Query: 894 VLAGIDTNFTVTSKATDDE-DFGELYAIKWTTLLIPPTTILIINIVGVVAGVSDAINNGY 952
VLAGIDTNFTVTSKA+D++ D ELY IKWTTLLIPPTT+LIIN+VGVVAG+S AIN+GY
Sbjct: 556 VLAGIDTNFTVTSKASDEDGDSAELYMIKWTTLLIPPTTLLIINLVGVVAGISYAINSGY 735
Query: 953 QSWGPLFGKLFFSFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFV 1012
QSWGPLFGKLFF+FWVIVHLYPFLKGLMGRQNRTPTIVV+WS+LLASIFSLLWVR+DPF
Sbjct: 736 QSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRVDPFT 915
Query: 1013 LKTKGPDTKLCGINC 1027
+ GP + CGINC
Sbjct: 916 TRVTGPKAEECGINC 960
>TC80467 homologue to GP|18875454|gb|AAK11588.2 cellulose synthase CesA-1
{Zinnia elegans}, partial (26%)
Length = 810
Score = 349 bits (896), Expect(2) = e-121
Identities = 163/202 (80%), Positives = 184/202 (90%)
Frame = +3
Query: 293 PIDRETYLDRLSIRYEREGEPNMLAPVDFFVSTVDPMKEPPLVTANTILSILAVDYPVDK 352
PI+R + DRLS R+EREGEP LAPVDFFVSTVDP+KEPPL+TANT+LSILAVDYPV+K
Sbjct: 6 PINRVAFTDRLSARFEREGEPCQLAPVDFFVSTVDPLKEPPLITANTVLSILAVDYPVEK 185
Query: 353 VSCYISDDGASMCTFEALSETAEFARKWVPFCKKFSIEPRAPEMYFSEKIDYLKDKVQPT 412
VSCY+SDDGA+M TFE+L ETA+FARKWVPFCKKF IEPRAPE YFS+KIDYLKDKVQP+
Sbjct: 186 VSCYVSDDGAAMLTFESLVETADFARKWVPFCKKFEIEPRAPEFYFSQKIDYLKDKVQPS 365
Query: 413 FVKERRAMKREYEEFKVRINALVAKAQKVPPEGWIMQDGTPWPGNNTKDHPGMIQVFLGN 472
FVKERRAMKREYEE+KVR+NALVAKAQK P EGW MQDGT WPGNN++DHPGMIQVFLG+
Sbjct: 366 FVKERRAMKREYEEYKVRVNALVAKAQKTPDEGWTMQDGTSWPGNNSRDHPGMIQVFLGH 545
Query: 473 SGGVDTEGNQLPRLVYVSREKR 494
SG D EGN+LPRLVYVSR ++
Sbjct: 546 SGAHDIEGNELPRLVYVSRREK 611
Score = 105 bits (261), Expect(2) = e-121
Identities = 51/69 (73%), Positives = 58/69 (83%), Gaps = 1/69 (1%)
Frame = +1
Query: 492 EKRPGFQHHKKAGAMNALVRVSAVLTNAPFMLNLDCDHYINNSKAVREAMCFLMDPQTGK 551
EKRPG+QHHKKAGA NALVRVSAVLTNAP++LNLDCDHY+NNSKAVREAMCF +
Sbjct: 604 EKRPGYQHHKKAGAENALVRVSAVLTNAPYILNLDCDHYVNNSKAVREAMCFSDGSSSSV 783
Query: 552 KV-CYVQFP 559
++ VQFP
Sbjct: 784 EMFVMVQFP 810
>TC86229 homologue to GP|6446577|gb|AAD39534.2| cellulose synthase catalytic
subunit {Gossypium hirsutum}, partial (22%)
Length = 739
Score = 349 bits (896), Expect(2) = e-106
Identities = 161/192 (83%), Positives = 177/192 (91%)
Frame = +1
Query: 398 FSEKIDYLKDKVQPTFVKERRAMKREYEEFKVRINALVAKAQKVPPEGWIMQDGTPWPGN 457
F K+ LKDKVQ +FVK+RRAMKREYEEFK+R+ LVAKA KVP EGW+MQDGTPWPGN
Sbjct: 19 FQRKLTTLKDKVQASFVKDRRAMKREYEEFKIRVXGLVAKAVKVPEEGWVMQDGTPWPGN 198
Query: 458 NTKDHPGMIQVFLGNSGGVDTEGNQLPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLT 517
NT+DHPGMIQVFLG SGG+DT+GN+LPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLT
Sbjct: 199 NTRDHPGMIQVFLGQSGGLDTDGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLT 378
Query: 518 NAPFMLNLDCDHYINNSKAVREAMCFLMDPQTGKKVCYVQFPQRFDGIDTHDRYANRNTV 577
N PF+LNLDCDHYINNSKA+REAMCF+MDP GK VCYVQFPQRFDGID +DRYANRNTV
Sbjct: 379 NGPFLLNLDCDHYINNSKALREAMCFMMDPNLGKNVCYVQFPQRFDGIDRNDRYANRNTV 558
Query: 578 FFDINMKGLDGI 589
FFDIN++GLDGI
Sbjct: 559 FFDINLRGLDGI 594
Score = 56.6 bits (135), Expect(2) = e-106
Identities = 27/44 (61%), Positives = 31/44 (70%), Gaps = 2/44 (4%)
Frame = +2
Query: 584 KGLDGIQGPVYVGTGCVFRRQALYGYNPPKGP--KRPKMVSCDC 625
+G QGPVYVGTGCVF R ALYGY+PP P K+P +VS C
Sbjct: 578 EGWMAFQGPVYVGTGCVFNRTALYGYDPPIKPKHKKPSLVSSLC 709
>TC89697 similar to GP|4886756|gb|AAD32031.1| cellulose synthase catalytic
subunit {Arabidopsis thaliana}, partial (26%)
Length = 1011
Score = 375 bits (963), Expect = e-104
Identities = 190/336 (56%), Positives = 235/336 (69%), Gaps = 1/336 (0%)
Frame = +2
Query: 1 MEASAGLVAGSHNRNELVVIHGHEEHKPLKNLDGQVCEICGDGVGLTVDGDLFVACNECG 60
MEA +GL AGS N NELVVI E K +KNLDGQ CEICGD VG TV+GDLFVAC ECG
Sbjct: 5 MEAKSGLFAGSLNSNELVVIQKQNEPKAVKNLDGQDCEICGDSVGRTVEGDLFVACEECG 184
Query: 61 FPVCRPCYEYERREGSQNCPQCKTRYKRLKGSPRVEGDDDEEDVDDIEHEFNIDDQKNKQ 120
FPVCRPCYEYER+EGSQNCPQC TRYKR+KGSPRVEGD+DEEDVDDIE EF ++++K K
Sbjct: 185 FPVCRPCYEYERKEGSQNCPQCHTRYKRIKGSPRVEGDEDEEDVDDIEQEFKMEEEKYK- 361
Query: 121 VNVVEALLHGKMSYGRGLEDDENSQFPPVISGGRSGEFPVGSHYGEQMLSSSLHKRIHPY 180
L+H + + +DD + P+ S +G +YG ++ +
Sbjct: 362 ------LMH-QDNMNSIDDDDTKYREQPLYS------HSIGENYGAKLDN---------- 472
Query: 181 PMSESGKEEGWKDRMDDWKLQQGNLGPEADE-DTDASMLDEARQPLSRKVPIASSKINPY 239
K++ D+WK QQGNL E D D + +M DE RQPLSRKV I S +++PY
Sbjct: 473 -----------KEKTDEWK-QQGNLLIETDAVDPEKAMKDETRQPLSRKVAIPSGRLSPY 616
Query: 240 RMVIVARLVILAFFLRYRILNPVHDALGLWLTSIICEIWFAFSWILDQFPKWFPIDRETY 299
RM++VARL++L F YRI +PV DA+GLW S+ CEIW A SWI+DQ PKWFPIDRETY
Sbjct: 617 RMMVVARLILLLLFFEYRISHPVPDAIGLWFISVSCEIWLALSWIVDQIPKWFPIDRETY 796
Query: 300 LDRLSIRYEREGEPNMLAPVDFFVSTVDPMKEPPLV 335
LDRLS+R+E E +PNM +P+D F++T DP+KEPPLV
Sbjct: 797 LDRLSVRFEPENKPNMPSPIDIFITTADPIKEPPLV 904
Score = 68.6 bits (166), Expect = 1e-11
Identities = 39/86 (45%), Positives = 47/86 (54%)
Frame = +3
Query: 285 LDQFPKWFPIDRETYLDRLSIRYEREGEPNMLAPVDFFVSTVDPMKEPPLVTANTILSIL 344
L +FP FP L R+ P L F + L TANT+LSIL
Sbjct: 753 LIRFPNGFPSIARHTLTAFQSGLSRKTSPTCLLQ*IFL*QPQIQSRNHLLCTANTVLSIL 932
Query: 345 AVDYPVDKVSCYISDDGASMCTFEAL 370
A+DYP +K+SCY+SDDGASM TFEAL
Sbjct: 933 ALDYPANKISCYVSDDGASMLTFEAL 1010
>TC77822 weakly similar to GP|21536834|gb|AAM61166.1 unknown {Arabidopsis
thaliana}, partial (33%)
Length = 2391
Score = 367 bits (943), Expect = e-101
Identities = 239/814 (29%), Positives = 399/814 (48%), Gaps = 25/814 (3%)
Frame = +2
Query: 216 SMLDEARQPLSRKVPIASSKINPYRMVIVARLVILAFFLRYRILNPVHDA------LGLW 269
S ++E PLS + + S + R+ + + L F + YR+ D+ L +
Sbjct: 5 SSMEEETLPLS-VIHVNKSLVFINRLHTILHSIALCFLVYYRLCFFFQDSKTRETPLLPY 181
Query: 270 LTSIICEIWFAFSWILDQFPKWFPIDRETYLDRLSIRYEREGEPNMLAPVDFFVSTVDPM 329
L EI +F WI DQ +W PI R + +RL E + L +D F+ T DP
Sbjct: 182 LLVFSSEIVLSFIWIFDQAFRWNPIKRTVFPERLP-------ENDKLPNIDVFICTADPT 340
Query: 330 KEPPLVTANTILSILAVDYPVDKVSCYISDDGASMCTFEALSETAEFARKWVPFCKKFSI 389
KEP L NT+LS +A+DYP +K+ Y+SDDG S T + E +FA+ W+PFC ++ I
Sbjct: 341 KEPTLDVMNTVLSAMAMDYPPEKLHVYVSDDGGSPITLNGMKEAWKFAKWWIPFCTRYRI 520
Query: 390 EPRAPEMYFSEKI---DYLKDKVQPTFVKERRAMKREYEEFKVRINALVAKAQKVPPEGW 446
R PE YFS+ D + V+ F+ ++R +K +YE FK I
Sbjct: 521 SCRCPEAYFSDSQNDGDDFSENVE--FIADKRMIKEKYEAFKEGIMR------------- 655
Query: 447 IMQDGTPWPGNNTKDHPGMIQVFLGNSGGVDTEGNQLPRLVYVSREKRPGFQHHKKAGAM 506
+ +D G ++HP I+V N G + E +LP LVYVSREK+P HH KAGA+
Sbjct: 656 VKEDQNHTTGITGQNHPSTIEVIQENCSG-EIEQVKLPLLVYVSREKKPSHPHHFKAGAL 832
Query: 507 NALVRVSAVLTNAPFMLNLDCDHYINNSKAVREAMCFLMDPQTGKKVCYVQFPQRFDGID 566
N L RVSAV++N+P++L LDCD + + R+AMCF +DP+ + +VQFPQ+F I
Sbjct: 833 NVLYRVSAVISNSPYLLVLDCDMFCGEPASARQAMCFHLDPKKSPSLAFVQFPQKFHNIS 1012
Query: 567 THDRYANRNTVFFDINMKGLDGIQGPVYVGTGCVFRRQALYGYNPPKGPKRPKMVSCDCC 626
+D Y +++ + + +G+DGI GP+ GTG +R+ALYG
Sbjct: 1013 KNDIYDSQHRSTYTVLWQGMDGITGPLLSGTGFYMKREALYG------------------ 1138
Query: 627 PCFGSRKKLKHAKSDVNGEAASLKGMDDDKEVLMSQMNFEKKFGQSSIFVTSTLMEEGGV 686
K+K + +E + + F K Q+ + ++ +G
Sbjct: 1139 -----NYKIKDTDFKL-------------QEYVGTSNEFIKSLKQN---CSPNIVTDGNA 1255
Query: 687 PPSSSPAGMLKEAIHVISCGYEDKTEWGLEVGWIYGSITEDILTGFKMHCRGWRSIYCMP 746
P +KE + + SC YE T+WG EVG++YG++ ED+ T + C GW S+YC P
Sbjct: 1256 LP-------IKETLLLTSCNYEIGTKWGKEVGFMYGTVCEDVHTSIMLSCNGWNSVYCDP 1414
Query: 747 RRAAFKGTAPINLSDRLNQVLRWALGSIEIFFSHHCPLWYGYKEKKLKWLERFAYANTTI 806
+ F G + NL+D Q RW+ G +E + CPL ++ L RF T
Sbjct: 1415 PKPQFLGNSATNLNDLFIQGTRWSSGLLESGLTKVCPLI--NCPLRMSLLLRFCLTYITC 1588
Query: 807 YPFTSIPLVAYCVLPAVCLLTDKFIMPPISTFAGLYFIALFSSIIATGVIELKWSGVSIE 866
+P +P + ++P +CLL+ + P +S + ++ S + E +G +
Sbjct: 1589 FPLHCLPFWCFAIVPQICLLSGVSLYPKVSEPFFFIYAFIYLSAQTKHLFEALSTGGTFR 1768
Query: 867 EWWRNEQFWVIGGVSAHLFAVIQGLLKVLAGIDTNFTVTSKATDDEDFGELYAIKW---- 922
++ ++ ++ HL+ ++ L+K + +F T+K D+E K+
Sbjct: 1769 TMIIEQRMRMMRSITCHLYGLLDCLMKEFGLREASFMPTNKVKDEEQTMLYQMDKYDFRI 1948
Query: 923 -TTLLIPPTTILIINIVGVVAGVSDAINNGYQSWGPLFGKLFFSFWVIVHL----YPFLK 977
L+P +++INI + G+ ++ G K+F +++ H+ YP ++
Sbjct: 1949 PNMFLVPMVALIMINISCFIGGIYRVLSLGE------LDKMFIQIYLMAHIILVNYPIIE 2110
Query: 978 GLMGRQNR---TPTIVV---IW-SVLLASIFSLL 1004
G++ R+++ +P++VV +W ++L +++ LL
Sbjct: 2111 GIVIRKDKGRISPSVVVTSNVWATILTCALYPLL 2212
>TC82247 similar to PIR|T10797|T10797 cellulose synthase (EC 2.4.1.-)
catalytic chain celA1 - upland cotton, partial (25%)
Length = 965
Score = 367 bits (941), Expect = e-101
Identities = 168/229 (73%), Positives = 199/229 (86%)
Frame = +1
Query: 786 YGYKEKKLKWLERFAYANTTIYPFTSIPLVAYCVLPAVCLLTDKFIMPPISTFAGLYFIA 845
YG+ +LK L+R AY NT +YPFTS+PLVAYC LPA+CLLT KFI+P +S A F+
Sbjct: 1 YGFAGGRLKLLQRLAYINTIVYPFTSLPLVAYCTLPAICLLTGKFIIPTLSNIASALFLG 180
Query: 846 LFSSIIATGVIELKWSGVSIEEWWRNEQFWVIGGVSAHLFAVIQGLLKVLAGIDTNFTVT 905
LF SII T V+EL+WSGV+IE+ WRNEQFWVIGGVSAHLFAV QG LK+LAG+DTNFTVT
Sbjct: 181 LFISIILTSVLELRWSGVTIEDLWRNEQFWVIGGVSAHLFAVFQGFLKMLAGVDTNFTVT 360
Query: 906 SKATDDEDFGELYAIKWTTLLIPPTTILIINIVGVVAGVSDAINNGYQSWGPLFGKLFFS 965
+KA DD +FGELY IKWTTLLIPPT+++IIN+VGVVAG SDA+N GY+SWGPL GK+FF+
Sbjct: 361 AKAADDAEFGELYMIKWTTLLIPPTSLIIINLVGVVAGFSDALNGGYESWGPLIGKVFFA 540
Query: 966 FWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFVLK 1014
FWVI HLYPFLKGLMGRQNRTPTIV++WSVLLAS+FSL+WV+I+PFV K
Sbjct: 541 FWVIFHLYPFLKGLMGRQNRTPTIVILWSVLLASVFSLIWVKINPFVSK 687
>BM780101 similar to GP|9622890|gb cellulose synthase-9 {Zea mays}, partial
(20%)
Length = 709
Score = 349 bits (896), Expect = 3e-96
Identities = 155/236 (65%), Positives = 196/236 (82%), Gaps = 2/236 (0%)
Frame = +1
Query: 761 DRLNQVLRWALGSIEIFFSHHCPLWYGYKEKKLKWLERFAYANTTIYPFTSIPLVAYCVL 820
+RLNQVLRWA+GS+EI FSHHCP+WYG+KE +LK L+R AY N+T+YPF+++PL+ YC++
Sbjct: 1 ERLNQVLRWAVGSLEILFSHHCPIWYGFKEGRLKLLQRIAYINSTVYPFSALPLIIYCIV 180
Query: 821 PAVCLLTDKFIMPPISTFAGLYFIALFSSIIATGVIELKWSGVSIEEWWRNEQFWVIGGV 880
PAVCLLTDKFI P + TFA L FI+LF SI A+ ++EL+WSGVS+EEWWRN+QFWVIG +
Sbjct: 181 PAVCLLTDKFITPSVGTFASLVFISLFISIFASSILELRWSGVSLEEWWRNQQFWVIGSI 360
Query: 881 SAHLFAVIQGLL-KVLAGIDTNFTVTSKATDDE-DFGELYAIKWTTLLIPPTTILIINIV 938
SAHLFA++QGL+ + L + +F + SKA DD+ +F ELY I+WT LLIPPTT+ I NI+
Sbjct: 361 SAHLFAIVQGLMGRFLGRFNAHFNIVSKAPDDDGEFNELYTIRWTVLLIPPTTVTIFNII 540
Query: 939 GVVAGVSDAINNGYQSWGPLFGKLFFSFWVIVHLYPFLKGLMGRQNRTPTIVVIWS 994
G+VAG +DAIN+G WG L GKLFFS WVI HLYPF GLMGRQNRTPT+VVIW+
Sbjct: 541 GIVAGFTDAINSGEHEWGALIGKLFFSSWVIAHLYPFP*GLMGRQNRTPTLVVIWA 708
>BG644386 similar to PIR|T05351|T0 cellulose synthase (EC 2.4.1.-) catalytic
chain RSW1 - Arabidopsis thaliana, partial (19%)
Length = 658
Score = 348 bits (892), Expect = 8e-96
Identities = 159/220 (72%), Positives = 194/220 (87%)
Frame = +1
Query: 232 ASSKINPYRMVIVARLVILAFFLRYRILNPVHDALGLWLTSIICEIWFAFSWILDQFPKW 291
ASS + PYR+VI+ RL+IL FF++YR+ +PV+DA LWL S+ICE+WFA SW+LDQFPKW
Sbjct: 1 ASSHLTPYRVVIILRLIILGFFMQYRLTHPVNDAYPLWLVSVICEVWFALSWLLDQFPKW 180
Query: 292 FPIDRETYLDRLSIRYEREGEPNMLAPVDFFVSTVDPMKEPPLVTANTILSILAVDYPVD 351
P++RET+LDRL++R++REGEP+ LAPVD FVSTVDP+KEPPL+TANT+LSILAVDYPVD
Sbjct: 181 SPVNRETFLDRLALRHDREGEPSQLAPVDVFVSTVDPLKEPPLITANTVLSILAVDYPVD 360
Query: 352 KVSCYISDDGASMCTFEALSETAEFARKWVPFCKKFSIEPRAPEMYFSEKIDYLKDKVQP 411
KVSCY+SDDG++M TFEALSETAEFAR+WVPFCKKFSIEPRAPE YF++KIDYLKDKVQP
Sbjct: 361 KVSCYVSDDGSAMLTFEALSETAEFARRWVPFCKKFSIEPRAPEFYFAQKIDYLKDKVQP 540
Query: 412 TFVKERRAMKREYEEFKVRINALVAKAQKVPPEGWIMQDG 451
+FVKER+AMKREYEEFK ++ L+ + K W MQDG
Sbjct: 541 SFVKERKAMKREYEEFKY-VSMLLLQKHKNA*RSWTMQDG 657
>TC87399 similar to GP|17381168|gb|AAL36396.1 putative cellulose synthase
catalytic subunit {Arabidopsis thaliana}, partial (53%)
Length = 1829
Score = 340 bits (872), Expect = 2e-93
Identities = 195/574 (33%), Positives = 299/574 (51%), Gaps = 5/574 (0%)
Frame = +3
Query: 268 LWLTSIICEIWFAFSWILDQFPKWFPIDRETYLDRLSIRYEREGEPNMLAPVDFFVSTVD 327
+W + E+WF F W L Q +W + R+ + DRLS RYE +ML VD FV T D
Sbjct: 216 VWFGMLAAELWFGFYWFLTQAFRWNLVFRQPFKDRLSQRYE-----HMLPEVDIFVCTAD 380
Query: 328 PMKEPPLVTANTILSILAVDYPVDKVSCYISDDGASMCTFEALSETAEFARKWVPFCKKF 387
P EPP++ NT+LS++A DYP +K+S Y+SDDG S TF AL E A FA+ W+PFCK+F
Sbjct: 381 PEIEPPMMVINTVLSVMAFDYPSEKLSVYLSDDGGSEITFYALLEAATFAKHWLPFCKRF 560
Query: 388 SIEPRAPEMYFSEKIDYLKDKVQPTFVKERRAMKREYEEFKVRINALVAKAQKVPPEGWI 447
+EPR+P YF+ +KD E A+K+ Y E + RI K ++ P E +
Sbjct: 561 KVEPRSPAAYFNG----IKDT---NIANELVAIKKLYNEMEKRIED-ATKLKRGPQEARL 716
Query: 448 MQDG-TPWPGNNTK-DHPGMIQVFL---GNSGGVDTEGNQLPRLVYVSREKRPGFQHHKK 502
G + W ++K DH ++Q+ L + D G LP LVY++REKRP + H+ K
Sbjct: 717 KHKGFSQWDSYSSKRDHDTILQILLHKKDHDNSKDVHGFMLPTLVYLAREKRPQYHHNYK 896
Query: 503 AGAMNALVRVSAVLTNAPFMLNLDCDHYINNSKAVREAMCFLMDPQTGKKVCYVQFPQRF 562
AGAMN+L+RVS++++N +LN+DCD Y NNS+++R+++C+ MD + G ++ +VQ PQ F
Sbjct: 897 AGAMNSLLRVSSIISNGKVILNVDCDMYSNNSESIRDSLCYFMDEEKGHEIAFVQSPQAF 1076
Query: 563 DGIDTHDRYANRNTVFFDINMKGLDGIQGPVYVGTGCVFRRQALYGYNPPKGPKRPKMVS 622
+ + +D YA+ ++ G DG GP+Y+GTG
Sbjct: 1077ENVTKNDLYASALLAIAEVEFHGADGCGGPLYIGTG------------------------ 1184
Query: 623 CDCCPCFGSRKKLKHAKSDVNGEAASLKGMDDDKEVLMSQMNFEKKFGQSSIFVTSTLME 682
CF R+ L +K D+ + S+ N + TL E
Sbjct: 1185-----CFHKRESL-----------CGMKFSDEYRHNWKSEDNLSTE---------ETLHE 1289
Query: 683 EGGVPPSSSPAGMLKEAIHVISCGYEDKTEWGLEVGWIYGSITEDILTGFKMHCRGWRSI 742
+ +++ + SC YE+ T+WG E+G YG ED++TG + GW+S+
Sbjct: 1290------------LEEKSKGLASCSYEENTQWGKEMGLKYGCPVEDVITGLSIQSNGWKSV 1433
Query: 743 YCMPRRAAFKGTAPINLSDRLNQVLRWALGSIEIFFSHHCPLWYGYKEKKLKWLERFAYA 802
Y P R AF G AP +L L Q RW+ G +I FS + P WY + K+ + Y
Sbjct: 1434YYNPARKAFLGVAPTSLLQVLIQHKRWSEGDFQILFSKYSPAWYAF--GKINLSLQMGYC 1607
Query: 803 NTTIYPFTSIPLVAYCVLPAVCLLTDKFIMPPIS 836
++ + + Y ++P++ LL + P ++
Sbjct: 1608AYCLWAPNCLATLFYSIIPSLYLLKGIPLFPKVT 1709
>TC90826 homologue to GP|6446577|gb|AAD39534.2| cellulose synthase catalytic
subunit {Gossypium hirsutum}, partial (20%)
Length = 702
Score = 310 bits (795), Expect(2) = 4e-92
Identities = 143/202 (70%), Positives = 165/202 (80%), Gaps = 1/202 (0%)
Frame = +2
Query: 686 VPPSSSPAGMLKEAIHVISCGYEDKTEWGLEVGWIYGSITEDILTGFKMHCRGWRSIYCM 745
VP S++P +LKEAIHVISCGYEDK+EWG E+GWIYGS+TEDILTGFKMH RGWRSIYCM
Sbjct: 95 VPQSATPETLLKEAIHVISCGYEDKSEWGTEIGWIYGSVTEDILTGFKMHARGWRSIYCM 274
Query: 746 PRRAAFKGTAPINLSDRLNQVLRWALGSIEIFFSHHCPLWYGYKEKKLKWL-ERFAYANT 804
P+ AAFKG+APINLSDRLNQVLRWALGS+EI S HCP+WYGY +LKWL E
Sbjct: 275 PKLAAFKGSAPINLSDRLNQVLRWALGSVEILLSRHCPIWYGY-SGRLKWL*EVLRT*TP 451
Query: 805 TIYPFTSIPLVAYCVLPAVCLLTDKFIMPPISTFAGLYFIALFSSIIATGVIELKWSGVS 864
IYP TSIPL+ YC LPAVCLLT+KFI+P I A ++ I+LF SI ATG++ +KWSGV
Sbjct: 452 PIYPITSIPLLMYCTLPAVCLLTNKFIIPQIXNIASIWVISLFLSIFATGILXMKWSGVG 631
Query: 865 IEEWWRNEQFWVIGGVSAHLFA 886
I+EWW+NEQFW IGG S HLFA
Sbjct: 632 IDEWWKNEQFWXIGGGSXHLFA 697
Score = 47.4 bits (111), Expect(2) = 4e-92
Identities = 20/31 (64%), Positives = 27/31 (86%)
Frame = +1
Query: 655 DKEVLMSQMNFEKKFGQSSIFVTSTLMEEGG 685
+K +LMSQM+ E++FGQS++FV STLME GG
Sbjct: 1 EKSLLMSQMSLERRFGQSAVFVASTLMENGG 93
>TC89444 similar to GP|12619788|gb|AAG60543.1 cellulose synthase-like CSLD3
{Arabidopsis thaliana}, partial (24%)
Length = 966
Score = 273 bits (698), Expect(2) = 5e-81
Identities = 155/306 (50%), Positives = 191/306 (61%), Gaps = 35/306 (11%)
Frame = +2
Query: 452 TPWPGNNTKDHPGMIQVFLGNSG-----GVDTEGN---------QLPRLVYVSREKRPGF 497
TP P ++ DH +IQV L G +++ N +LP LVYVSREKRPG+
Sbjct: 5 TPAPEHSRGDHSSIIQVMLKPPSDEPLTGPESDSNGMNLTEVDIRLPMLVYVSREKRPGY 184
Query: 498 QHHKKAGAMNALVRVSAVLTNAPFMLNLDCDHYINNSKAVREAMCFLMDPQTGKKVCYVQ 557
H+KKAGAMNALVR SAV++N PF+LNLDCDHYI NS+A+RE MC++MD + G K+ YVQ
Sbjct: 185 DHNKKAGAMNALVRASAVMSNGPFILNLDCDHYIYNSEAIREGMCYMMD-RDGDKISYVQ 361
Query: 558 FPQRFDGIDTHDRYANRNTVFFDINMKGLDGIQGPVYVGTGCVFRRQALYGYNPPKGPKR 617
FPQRF+GID DRYAN NTVFFD+NM+ LDGIQGPVYVGTGC+FRR ALYG++PP+
Sbjct: 362 FPQRFEGIDPSDRYANHNTVFFDVNMRALDGIQGPVYVGTGCLFRRTALYGFDPPR---- 529
Query: 618 PKMVSCDCCPCFGSRKKLKHAKSDV-NGEAASLKGMDDDKEVLMSQMNFEKKFGQSSIFV 676
V + FGS+KK + V + E SL+ E +S KKFG S++FV
Sbjct: 530 ---VQEEATGWFGSKKKNSSTVASVPDVEDQSLRNGGSIDEEELSSALIPKKFGNSTLFV 700
Query: 677 TSTLMEE-GGVPPSSSP-------------------AGMLKEAIHVISCGYEDKTEWGLE 716
S + E G P + P A + EAI VISC YEDKTEWG
Sbjct: 701 DSIRVAEFQGRPLADHPSIKNGRQPGALTLPRDLLDAATIAEAISVISCWYEDKTEWGDR 880
Query: 717 VGWIYG 722
VGWIYG
Sbjct: 881 VGWIYG 898
Score = 47.8 bits (112), Expect(2) = 5e-81
Identities = 17/30 (56%), Positives = 25/30 (82%)
Frame = +3
Query: 715 LEVGWIYGSITEDILTGFKMHCRGWRSIYC 744
+E+ GS+TED++TG++MH RGWRS+YC
Sbjct: 876 IELDGFTGSVTEDVVTGYRMHNRGWRSVYC 965
>TC79459 homologue to GP|6446577|gb|AAD39534.2| cellulose synthase catalytic
subunit {Gossypium hirsutum}, partial (14%)
Length = 781
Score = 276 bits (705), Expect = 4e-74
Identities = 129/157 (82%), Positives = 145/157 (92%), Gaps = 1/157 (0%)
Frame = +1
Query: 872 EQFWVIGGVSAHLFAVIQGLLKVLAGIDTNFTVTSKATDDE-DFGELYAIKWTTLLIPPT 930
EQFWVIGGVSAHLFAV QGLLKVLAGIDTNFTVTSKA+D++ D ELY KWTTLLIPPT
Sbjct: 1 EQFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDSAELYMFKWTTLLIPPT 180
Query: 931 TILIINIVGVVAGVSDAINNGYQSWGPLFGKLFFSFWVIVHLYPFLKGLMGRQNRTPTIV 990
T+LIIN+VGVVAG+S A+N+GYQSWGPLFGKLFF+FWVI+HLYPFLKGLMGRQNRTPTIV
Sbjct: 181 TLLIINLVGVVAGISYAVNSGYQSWGPLFGKLFFAFWVIIHLYPFLKGLMGRQNRTPTIV 360
Query: 991 VIWSVLLASIFSLLWVRIDPFVLKTKGPDTKLCGINC 1027
V+WS+LLASIFSLLWVRIDPF + GP +++CGINC
Sbjct: 361 VVWSILLASIFSLLWVRIDPFTTRVTGPKSEMCGINC 471
>BE203030 homologue to GP|13925881|g cellulose synthase catalytic subunit
{Nicotiana alata}, partial (15%)
Length = 521
Score = 275 bits (703), Expect = 6e-74
Identities = 133/174 (76%), Positives = 150/174 (85%), Gaps = 5/174 (2%)
Frame = +3
Query: 465 MIQVFLGNSGGVDTEGNQLPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNAPFMLN 524
MIQVFLG +G D GN+LPRLVY SREKRPGF+HHKKAGAMNALVRVSAV++NAP+MLN
Sbjct: 3 MIQVFLGQNGVRDIYGNELPRLVYGSREKRPGFEHHKKAGAMNALVRVSAVISNAPYMLN 182
Query: 525 LDCDHYINNSKAVREAMCFLMDPQTGKKVCYVQFPQRFDGIDTHDRYANRNTVFFDINMK 584
+DCDHYINNSKA+REAMCF+MDP +GKK+CYVQFPQRFDGID HDRY+NRN VFFDINMK
Sbjct: 183 VDCDHYINNSKALREAMCFMMDPTSGKKICYVQFPQRFDGIDRHDRYSNRNVVFFDINMK 362
Query: 585 GLDGIQGPVYVGTGCVFRRQALYGYNPPKGPKRPKMVSCDCCP--CF---GSRK 633
GLDGIQGP+YVGTGCVF RQALYGY+ P K+P +C+ P CF GSRK
Sbjct: 363 GLDGIQGPIYVGTGCVFMRQALYGYDAP-AKKKPPGKTCNWWPKWCFMWCGSRK 521
>TC86230 homologue to GP|6446577|gb|AAD39534.2| cellulose synthase catalytic
subunit {Gossypium hirsutum}, partial (29%)
Length = 984
Score = 265 bits (676), Expect(2) = 1e-70
Identities = 126/173 (72%), Positives = 144/173 (82%), Gaps = 1/173 (0%)
Frame = +2
Query: 352 KVSCYISDDGASMCTF-EALSETAEFARKWVPFCKKFSIEPRAPEMYFSEKIDYLKDKVQ 410
+ SCY+SDDGA+M + KK++IEPRAPE YF++KIDYLKDKVQ
Sbjct: 452 RCSCYVSDDGAAMLII*SSC*NITSLQENGFHSPKKYNIEPRAPEWYFAQKIDYLKDKVQ 631
Query: 411 PTFVKERRAMKREYEEFKVRINALVAKAQKVPPEGWIMQDGTPWPGNNTKDHPGMIQVFL 470
+FVK+RRAMKREYEEFK+RIN LVAKA KVP EGW+MQDGTPWPGNN +DHPGMIQVFL
Sbjct: 632 TSFVKDRRAMKREYEEFKIRINGLVAKATKVPEEGWVMQDGTPWPGNNVRDHPGMIQVFL 811
Query: 471 GNSGGVDTEGNQLPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNAPFML 523
G SGG+DT+GN+LPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTN PF++
Sbjct: 812 GQSGGLDTDGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLI 970
Score = 213 bits (541), Expect = 4e-55
Identities = 112/182 (61%), Positives = 135/182 (73%), Gaps = 2/182 (1%)
Frame = +3
Query: 214 DASMLDEARQPLSRKVPIASSKINPYRMVIVARLVILAFFLRYRILNPVHDALGLWLTSI 273
D+ + DEARQPLSRKV I SS+INPYR+VIV RLV+L FL YR+ NPV +A LWL S+
Sbjct: 36 DSLLNDEARQPLSRKVSIPSSRINPYRLVIVLRLVVLCIFLHYRLTNPVRNAYALWLVSV 215
Query: 274 ICEIWFAFSWILDQFPKWFPIDRETYLDRLSIRYEREGEPNMLAPVDFFVSTVDPMKEPP 333
ICEIWFA SWILDQFPKW P++RETYLDRL++RY+REGEP+ LA VD FVSTVDP+KEPP
Sbjct: 216 ICEIWFAISWILDQFPKWLPVNRETYLDRLALRYDREGEPSQLAAVDIFVSTVDPLKEPP 395
Query: 334 LVTANTILSILAVDYPVDKVSCYISDDGASMC-TFEALSETAEFARKWVPFCKKF-SIEP 391
LVTANT+LSIL+ + A +C +FEAL+ET+ CKK SI P
Sbjct: 396 LVTANTVLSILSS*LSSG*GVPAMFLMTAPLC*SFEALAETSR-------VCKKMGSIHP 554
Query: 392 RA 393
R+
Sbjct: 555 RS 560
Score = 21.6 bits (44), Expect(2) = 1e-70
Identities = 7/8 (87%), Positives = 8/8 (99%)
Frame = +3
Query: 520 PFMLNLDC 527
PF+LNLDC
Sbjct: 960 PFLLNLDC 983
>AW688489 similar to PIR|T10797|T10 cellulose synthase (EC 2.4.1.-) catalytic
chain celA1 - upland cotton, partial (17%)
Length = 577
Score = 256 bits (655), Expect = 2e-68
Identities = 119/163 (73%), Positives = 137/163 (84%)
Frame = +2
Query: 221 ARQPLSRKVPIASSKINPYRMVIVARLVILAFFLRYRILNPVHDALGLWLTSIICEIWFA 280
A PLS +PI SK+ PYR VI+ RLVIL F YR+ NPV A LWLTSIICEIWFA
Sbjct: 89 AALPLSVLMPIVKSKLAPYRTVIIVRLVILGLFFHYRVTNPVESAFPLWLTSIICEIWFA 268
Query: 281 FSWILDQFPKWFPIDRETYLDRLSIRYEREGEPNMLAPVDFFVSTVDPMKEPPLVTANTI 340
FSW+LDQFPKW P++R TY++ LS R+EREGEP+ LA VDFFVSTVDP+KEPPL+TANT+
Sbjct: 269 FSWVLDQFPKWSPVNRHTYIENLSARFEREGEPSGLASVDFFVSTVDPLKEPPLITANTV 448
Query: 341 LSILAVDYPVDKVSCYISDDGASMCTFEALSETAEFARKWVPF 383
LSILAVDYPVDKVSCY+SDDGA+M TFE+L ETAEFA+KWVPF
Sbjct: 449 LSILAVDYPVDKVSCYVSDDGAAMLTFESLVETAEFAKKWVPF 577
>TC90813 similar to GP|10177205|dbj|BAB10307. cellulose synthase catalytic
subunit {Arabidopsis thaliana}, partial (21%)
Length = 925
Score = 183 bits (465), Expect(2) = 3e-65
Identities = 81/98 (82%), Positives = 93/98 (94%)
Frame = +1
Query: 267 GLWLTSIICEIWFAFSWILDQFPKWFPIDRETYLDRLSIRYEREGEPNMLAPVDFFVSTV 326
GLWLTS+ICEIWFA SWI+DQFPKW+PI RETYLDRLS+RYE+EG+P+ LA VD FVSTV
Sbjct: 631 GLWLTSVICEIWFAVSWIMDQFPKWYPITRETYLDRLSLRYEKEGKPSQLASVDVFVSTV 810
Query: 327 DPMKEPPLVTANTILSILAVDYPVDKVSCYISDDGASM 364
DPMKEPPL+TANT+LSILAVDYPVDKV+CY+SDDGA+M
Sbjct: 811 DPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAM 924
Score = 85.1 bits (209), Expect(2) = 3e-65
Identities = 66/197 (33%), Positives = 96/197 (48%), Gaps = 48/197 (24%)
Frame = +2
Query: 105 DDIEHEFNIDDQKNKQVNVVEALLHGKMSYGRGLEDDENSQFPPVISGGRSGEFPVGSHY 164
D++ +EF+ D Q +ALL G+++ GRG + + S + E P+ + Y
Sbjct: 2 DNLNNEFDYDLDDMGQQAHSDALLSGRLNTGRGSNTNISGANSEHGSPTLNPEIPLLT-Y 178
Query: 165 GEQ--MLSSSLH-----------KRIHPYPMSESG----------KEE---------GWK 192
GE+ +SS H R+HP P ++ K++ WK
Sbjct: 179 GEEDPEISSDRHALIVPPYMNHGNRVHPMPYTDPSIPLQPRPMVPKKDIAVYGYGSVAWK 358
Query: 193 DRMDDWKLQQGN----LGPEAD------------EDTDASMLDEARQPLSRKVPIASSKI 236
DRM++WK +Q + + E D +D D M+DE RQPLSRK+PI SSKI
Sbjct: 359 DRMEEWKKRQSDKLQVVKHEGDNNDGSGSF*DDFDDPDLPMMDEGRQPLSRKLPIPSSKI 538
Query: 237 NPYRMVIVARLVILAFF 253
NPYR++IV RLVIL F
Sbjct: 539 NPYRIIIVLRLVILGLF 589
Score = 30.4 bits (67), Expect = 3.6
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = +3
Query: 247 LVILAFFLRYRILNPVHDALGLWLTSIICEIWFAFSWILD 286
L+ L FF YRIL+P +DA LWL + I + ILD
Sbjct: 570 LLFLGFFFHYRILHPDNDA--LWLVADISHM*NMVCCILD 683
>BG452180 similar to PIR|T10800|T10 cellulose synthase (EC 2.4.1.-) catalytic
chain celA2 - upland cotton (fragment), partial (24%)
Length = 586
Score = 182 bits (463), Expect(3) = 4e-64
Identities = 79/126 (62%), Positives = 103/126 (81%)
Frame = +2
Query: 763 LNQVLRWALGSIEIFFSHHCPLWYGYKEKKLKWLERFAYANTTIYPFTSIPLVAYCVLPA 822
L+QVL+WALG+ +IFFS +CPLWYGY K LKWL+R AY N +YPF+SIPL+ YC +PA
Sbjct: 2 LHQVLKWALGATQIFFSGYCPLWYGYSGK-LKWLQRLAYMNAIVYPFSSIPLLVYCTIPA 178
Query: 823 VCLLTDKFIMPPISTFAGLYFIALFSSIIATGVIELKWSGVSIEEWWRNEQFWVIGGVSA 882
+CLLT KFI+P +++ A ++ + LF SII T V+EL+WS V+I++WWRNEQFWVIGGVSA
Sbjct: 179 ICLLTGKFILPTLTSLASIWLMTLFISIILTCVLELRWSKVNIQDWWRNEQFWVIGGVSA 358
Query: 883 HLFAVI 888
HLF +
Sbjct: 359 HLFCSV 376
Score = 64.7 bits (156), Expect(3) = 4e-64
Identities = 32/49 (65%), Positives = 39/49 (79%)
Frame = +3
Query: 885 FAVIQGLLKVLAGIDTNFTVTSKATDDEDFGELYAIKWTTLLIPPTTIL 933
FAV QGLLKV AG DT+F V +K+ DD FG+L+ KWTTLLIPPT+I+
Sbjct: 366 FAVFQGLLKV-AGRDTSFAVRTKSADDTAFGQLHLFKWTTLLIPPTSIV 509
Score = 38.1 bits (87), Expect(3) = 4e-64
Identities = 15/25 (60%), Positives = 21/25 (84%)
Frame = +1
Query: 934 IINIVGVVAGVSDAINNGYQSWGPL 958
I+N++G+ A VS+AIN+GY SWG L
Sbjct: 511 ILNMIGIXAXVSEAINSGYNSWGLL 585
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.322 0.140 0.442
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,981,211
Number of Sequences: 36976
Number of extensions: 576978
Number of successful extensions: 3177
Number of sequences better than 10.0: 95
Number of HSP's better than 10.0 without gapping: 3039
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3111
length of query: 1027
length of database: 9,014,727
effective HSP length: 106
effective length of query: 921
effective length of database: 5,095,271
effective search space: 4692744591
effective search space used: 4692744591
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)
Lotus: description of TM0037a.7