BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0037a.11
(685 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF644046 52 6e-07
TC92715 weakly similar to GP|23496006|gb|AAN35668.1 hypothetical... 36 0.056
BF641220 weakly similar to PIR|G86203|G86 probable N-arginine di... 35 0.095
TC88896 weakly similar to GP|6728968|gb|AAF26966.1| unknown prot... 35 0.12
TC77681 similar to GP|22597156|gb|AAN03465.1 nucleolar histone d... 35 0.12
CB066689 homologue to GP|13646986|dbj DNA-binding protein DF1 {P... 33 0.36
TC77881 homologue to GP|15528439|emb|CAC69137. MEK map kinase ki... 33 0.47
TC87237 similar to GP|160409|gb|AAA29651.1|| mature-parasite-inf... 32 0.81
BQ143784 weakly similar to SP|P33485|VNUA Probable nuclear antig... 32 0.81
TC80631 similar to GP|21555659|gb|AAM63908.1 unknown {Arabidopsi... 32 0.81
TC80893 similar to GP|4557063|gb|AAD22502.1| expressed protein {... 32 0.81
TC77337 weakly similar to GP|4019275|gb|AAC95573.1| orf 48 {Atel... 32 1.1
CB065389 similar to PIR|G83568|G83 probable permease of ABC tran... 32 1.1
TC82106 similar to PIR|T49191|T49191 hypothetical protein MAA21.... 32 1.1
TC86560 similar to GP|8843737|dbj|BAA97285.1 myosin heavy chain-... 32 1.1
TC91658 similar to GP|14329812|emb|CAC40753. putative nucleosome... 32 1.1
TC86145 homologue to GP|10334499|emb|CAC10211. hypothetical prot... 31 1.8
TC89156 similar to GP|15277532|gb|AAK93949.1 HCF106 {Pisum sativ... 31 1.8
CA859251 similar to GP|21305823|gb DNA polymerase I {Hz-1 insect... 31 1.8
TC86146 homologue to GP|10334499|emb|CAC10211. hypothetical prot... 31 1.8
>BF644046
Length = 597
Score = 52.4 bits (124), Expect = 6e-07
Identities = 25/53 (47%), Positives = 30/53 (56%)
Frame = +3
Query: 141 VYGYFFLDLNIKLPFSPFICHVLSFLNVAPCQLQPNAWGFLRCFEILCEHLSF 193
+Y + F D+ K PF+ F C L LNVA QL PN F+ FEI CE L F
Sbjct: 12 MYSFVFEDIGFKFPFTNFECDFLKALNVASSQLHPNCCAFMCGFEISCESLGF 170
>TC92715 weakly similar to GP|23496006|gb|AAN35668.1 hypothetical protein
{Plasmodium falciparum 3D7}, partial (2%)
Length = 537
Score = 35.8 bits (81), Expect = 0.056
Identities = 21/76 (27%), Positives = 31/76 (40%)
Frame = +1
Query: 362 GSDNVRDPKRQKTSGAAGGKPLHQSTLDSKSRPAEKKKGHDNVPPPQQDSSTLINRPSTP 421
G+ + R P R+ +S A +P T + S PA + + + PP SS+ R P
Sbjct: 19 GAGDARHPSRRSSSCAPRARPSTSPTTSTPSSPARRPRSRTSSSPPNPRSSSPSARRRPP 198
Query: 422 FGQAGPSSAIGGEAPP 437
S APP
Sbjct: 199 ASSTP*SCPASSSAPP 246
>BF641220 weakly similar to PIR|G86203|G86 probable N-arginine dibasic
convertase [imported] - Arabidopsis thaliana, partial
(5%)
Length = 634
Score = 35.0 bits (79), Expect = 0.095
Identities = 38/150 (25%), Positives = 65/150 (43%), Gaps = 17/150 (11%)
Frame = +2
Query: 551 LQKTKSLKEAIN---DKHTAVQAKYQKLEKKYDRLNASILGRASLQYAQGFLAAKEQINV 607
+QKTK K I KH+ ++ +K+ L + + A L++ + + V
Sbjct: 65 VQKTKPNKTLITIVAPKHSLSPFRFST-DKESMGLKGAPAAATTAATAAVALSSSDDVIV 241
Query: 608 VEPGFD-LSRIGWLKEIKDGQVVGDDDI---------SLDLLPQFDDESEPEEDGEDGNE 657
P + L R+ LK +V D +I S+D + +D+ + E+D ED +E
Sbjct: 242 KSPNDNRLYRLVHLKNGLQALIVHDPEIYPEGAPKDGSIDEDDEEEDDEDEEDDEEDDDE 421
Query: 658 QHRNEDQEKEDPQ----AGTSQGNNANNEN 683
+ED+E ED G G A N++
Sbjct: 422 GEDDEDEEXEDEDEXXVXGREGGKGAANQS 511
>TC88896 weakly similar to GP|6728968|gb|AAF26966.1| unknown protein
{Arabidopsis thaliana}, partial (27%)
Length = 1097
Score = 34.7 bits (78), Expect = 0.12
Identities = 34/110 (30%), Positives = 52/110 (46%), Gaps = 1/110 (0%)
Frame = +2
Query: 476 MAIHHALSAASTVAGMAQCVKELIAAKNRFEKKAADYKTAYERAKTDAETANKKLKSAEE 535
+A+ SA V+ A+ KE + A N+ E ++ Y+T E K+D E + +K +S
Sbjct: 590 LAMDSLASALHEVSAEARDTKEKLLA-NQAEHES--YETQIEDLKSDLEASKEKYESMLN 760
Query: 536 KCAKLTEDLAASDLLLQKTKSLKEAINDKHTAVQAKYQKLE-KKYDRLNA 584
EDL SDL K K + +ND H + +E K D LN+
Sbjct: 761 DAHHEIEDL-KSDLEASKEK-YESMLNDAHHEIDVLTSSIENSKMDILNS 904
>TC77681 similar to GP|22597156|gb|AAN03465.1 nucleolar histone deacetylase
HD2-P39 {Glycine max}, partial (47%)
Length = 1233
Score = 34.7 bits (78), Expect = 0.12
Identities = 20/53 (37%), Positives = 26/53 (48%)
Frame = +2
Query: 631 DDDISLDLLPQFDDESEPEEDGEDGNEQHRNEDQEKEDPQAGTSQGNNANNEN 683
DDD S D + DDE E D + +E +ED E+E P QG NE+
Sbjct: 584 DDDESDDEIGSSDDEME-NADSDSEDEDDSDEDDEEETPVKKVDQGKKRPNES 739
>CB066689 homologue to GP|13646986|dbj DNA-binding protein DF1 {Pisum
sativum}, partial (8%)
Length = 508
Score = 33.1 bits (74), Expect = 0.36
Identities = 18/56 (32%), Positives = 30/56 (53%)
Frame = +3
Query: 627 QVVGDDDISLDLLPQFDDESEPEEDGEDGNEQHRNEDQEKEDPQAGTSQGNNANNE 682
QVV ++++ L+ Q + + P + GED EQ+R QE+ED G ++E
Sbjct: 171 QVVQPENMAAPLMVQPEQQWRPPQQGEDNMEQNRG--QEEEDMDEDDKDGEEEDDE 332
>TC77881 homologue to GP|15528439|emb|CAC69137. MEK map kinase kinsae
{Medicago sativa subsp. x varia}, complete
Length = 1546
Score = 32.7 bits (73), Expect = 0.47
Identities = 17/58 (29%), Positives = 28/58 (47%)
Frame = +2
Query: 369 PKRQKTSGAAGGKPLHQSTLDSKSRPAEKKKGHDNVPPPQQDSSTLINRPSTPFGQAG 426
P S A G P + + SRP +++ H +P PQ+D++ + P P G +G
Sbjct: 239 PPTSTGSATASGSPNNNN-----SRPQRRRRDHLTLPLPQRDTNLAVPLPLPPSGGSG 397
>TC87237 similar to GP|160409|gb|AAA29651.1|| mature-parasite-infected
erythrocyte surface antigen {Plasmodium falciparum},
partial (2%)
Length = 2007
Score = 32.0 bits (71), Expect = 0.81
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Frame = +1
Query: 621 KEIKDGQVV---GDDDISLDLLPQFDDESEPEEDGEDGNEQHRNEDQEKEDPQAGTSQGN 677
+EIKDG+ + +++ + Q ++E++ EE + NE +NE EKE + +
Sbjct: 172 EEIKDGEKIQQENEENKDEEKSQQENEENKDEEKSQQENELKKNEGGEKETGEITEEKSK 351
Query: 678 NANNE 682
N E
Sbjct: 352 QENEE 366
>BQ143784 weakly similar to SP|P33485|VNUA Probable nuclear antigen. [strain
Kaplan PRV] {Pseudorabies virus}, partial (2%)
Length = 1022
Score = 32.0 bits (71), Expect = 0.81
Identities = 25/112 (22%), Positives = 38/112 (33%)
Frame = +3
Query: 339 QSAAAAKKRAAETEQKKKNEGTSGSDNVRDPKRQKTSGAAGGKPLHQSTLDSKSRPAEKK 398
Q A+ T + +G +G DP + G GG P + + S PA KK
Sbjct: 108 QDPPPARNPPQPTGTATRRKGGAGRGAQTDPPPPRPRG--GGLPRQPTKKQTPSMPAPKK 281
Query: 399 KGHDNVPPPQQDSSTLINRPSTPFGQAGPSSAIGGEAPPPLLNLSDPHFNGL 450
+ PPP P+ + P + PP PH + +
Sbjct: 282 RRTRGHPPPPGKPHHAAPPPNAGRERRAPGKSHRKSKKPPQEKTQPPHHHSI 437
>TC80631 similar to GP|21555659|gb|AAM63908.1 unknown {Arabidopsis
thaliana}, partial (60%)
Length = 1296
Score = 32.0 bits (71), Expect = 0.81
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 9/62 (14%)
Frame = +2
Query: 155 FSPFICHVLSFLN------VAPCQLQPNAWGFLRCFEILCEHLSFTPTYPL---FFLFYK 205
FS ++CHV + +N + PC+ WG L C + CE + + F+FYK
Sbjct: 926 FSQWLCHVHNVVNRSISKPIFPCERVDARWGKLDCEQNACEIIGSISIFGKIW*IFIFYK 1105
Query: 206 SV 207
+
Sbjct: 1106II 1111
>TC80893 similar to GP|4557063|gb|AAD22502.1| expressed protein {Arabidopsis
thaliana}, partial (39%)
Length = 883
Score = 32.0 bits (71), Expect = 0.81
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +3
Query: 643 DDESEPEEDGEDGNEQHRNEDQEKED 668
DD+ EED EDG ++ ED+E++D
Sbjct: 480 DDDDGDEEDEEDGEDEEDEEDEEEDD 557
Score = 29.6 bits (65), Expect = 4.0
Identities = 15/53 (28%), Positives = 28/53 (52%)
Frame = +3
Query: 631 DDDISLDLLPQFDDESEPEEDGEDGNEQHRNEDQEKEDPQAGTSQGNNANNEN 683
DDD D+ + DD E + G++G E E ++DP+A + G++ ++
Sbjct: 336 DDDDDDDVQDEDDDGEEEDYSGDEGEE----EGDPEDDPEANGAGGSDDGEDD 482
Score = 29.3 bits (64), Expect = 5.2
Identities = 13/28 (46%), Positives = 18/28 (63%)
Frame = +3
Query: 643 DDESEPEEDGEDGNEQHRNEDQEKEDPQ 670
D + E EEDGED E +E+++ E PQ
Sbjct: 489 DGDEEDEEDGED-EEDEEDEEEDDETPQ 569
Score = 29.3 bits (64), Expect = 5.2
Identities = 17/63 (26%), Positives = 31/63 (48%), Gaps = 1/63 (1%)
Frame = +3
Query: 621 KEIKDGQVVGDDDISLDLLPQFDDESEPEE-DGEDGNEQHRNEDQEKEDPQAGTSQGNNA 679
KE K +DD D + DD+ E E+ G++G E+ ED + + G+ G +
Sbjct: 303 KENKSDTEDDEDDDDDDDVQDEDDDGEEEDYSGDEGEEEGDPEDDPEANGAGGSDDGEDD 482
Query: 680 NNE 682
+++
Sbjct: 483 DDD 491
>TC77337 weakly similar to GP|4019275|gb|AAC95573.1| orf 48 {Ateline
herpesvirus 3}, partial (8%)
Length = 986
Score = 31.6 bits (70), Expect = 1.1
Identities = 11/25 (44%), Positives = 20/25 (80%)
Frame = +3
Query: 644 DESEPEEDGEDGNEQHRNEDQEKED 668
DE+ EED EDG++Q ++D++++D
Sbjct: 582 DENGEEEDDEDGDDQDEDDDEDEDD 656
Score = 31.2 bits (69), Expect = 1.4
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +3
Query: 631 DDDISLDLLPQFDDESEPEEDGEDGNEQHRNEDQEKED 668
+DD D + DDE E ++D E+G E+ E ++ED
Sbjct: 600 EDDEDGDDQDEDDDEDEDDDDEEEGGEEDEEEGVDEED 713
Score = 29.6 bits (65), Expect = 4.0
Identities = 15/43 (34%), Positives = 26/43 (59%), Gaps = 2/43 (4%)
Frame = +3
Query: 630 GDDDISLDLLPQFDDESEP--EEDGEDGNEQHRNEDQEKEDPQ 670
GDD D + DD+ E EED E+G ++ NE++E+++ +
Sbjct: 615 GDDQDEDDDEDEDDDDEEEGGEEDEEEGVDEEDNEEEEEDEDE 743
Score = 28.9 bits (63), Expect = 6.8
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +3
Query: 643 DDESEPEEDGEDGNEQHRNEDQEKEDPQAGTSQGNNANNEN 683
DDE E ++DG DG ++ ED G GNN+NN++
Sbjct: 432 DDEDEEDDDG-DGAFGEGEDELSSED---GGGYGNNSNNKS 542
>CB065389 similar to PIR|G83568|G83 probable permease of ABC transporter
PA0605 [imported] - Pseudomonas aeruginosa (strain
PAO1), partial (38%)
Length = 640
Score = 31.6 bits (70), Expect = 1.1
Identities = 19/63 (30%), Positives = 26/63 (41%)
Frame = +1
Query: 376 GAAGGKPLHQSTLDSKSRPAEKKKGHDNVPPPQQDSSTLINRPSTPFGQAGPSSAIGGEA 435
G A G+PLHQ+ L + ++ D PP S R S P AG ++
Sbjct: 205 GRAPGRPLHQAALCHPTATPPRQCAADQRPPRDCRRSCTTARRSAPETPAGETAPTARST 384
Query: 436 PPP 438
P P
Sbjct: 385 PAP 393
>TC82106 similar to PIR|T49191|T49191 hypothetical protein MAA21.130 -
Arabidopsis thaliana, partial (5%)
Length = 990
Score = 31.6 bits (70), Expect = 1.1
Identities = 38/164 (23%), Positives = 76/164 (46%), Gaps = 6/164 (3%)
Frame = +2
Query: 266 FYWTKNPRRKISVSYDALDESEQGVADYLRTLPVISGHDLIEASKSGTLNQFFTTMGKGK 325
F K+ + SVS D+ E + V+ + V ++++ +SG+ ++ M +G+
Sbjct: 53 FREVKSKSKSPSVSKDSESEQSKSVSG----VEVKKSEEMLQQVQSGSGSE----MEEGE 208
Query: 326 VDANPIKMKEYLA----QSAAAAKKRAAETEQ--KKKNEGTSGSDNVRDPKRQKTSGAAG 379
++ P++ E ++A + ++ +E +Q KKKNE SG +V ++Q S
Sbjct: 209 LEPEPVRETELKPAPKDEAAGSEIQQTSEDKQAQKKKNECHSGDADVVMEEKQTLSSKEE 388
Query: 380 GKPLHQSTLDSKSRPAEKKKGHDNVPPPQQDSSTLINRPSTPFG 423
K +DS+ + A K+ +P Q D + I+ + G
Sbjct: 389 AKCTQD--IDSEVKVAGKEV--CELPKTQDDPTNEISVAESEIG 508
>TC86560 similar to GP|8843737|dbj|BAA97285.1 myosin heavy chain-like
{Arabidopsis thaliana}, partial (28%)
Length = 2450
Score = 31.6 bits (70), Expect = 1.1
Identities = 20/67 (29%), Positives = 31/67 (45%)
Frame = +3
Query: 342 AAAKKRAAETEQKKKNEGTSGSDNVRDPKRQKTSGAAGGKPLHQSTLDSKSRPAEKKKGH 401
A A KRA E E ++ E + QK + A + L ++ + S+S P +
Sbjct: 1941 AEAAKRAVEGELRRWRE-----------REQKKAAEAAARILAETQMSSQSSPQHYRIQK 2087
Query: 402 DNVPPPQ 408
NVPPP+
Sbjct: 2088 QNVPPPR 2108
>TC91658 similar to GP|14329812|emb|CAC40753. putative nucleosome assembly
protein 1 {Atropa belladonna}, partial (46%)
Length = 583
Score = 31.6 bits (70), Expect = 1.1
Identities = 15/49 (30%), Positives = 28/49 (56%)
Frame = +2
Query: 632 DDISLDLLPQFDDESEPEEDGEDGNEQHRNEDQEKEDPQAGTSQGNNAN 680
DDI +D + DE + ++D +D +++ +ED E+ED G S+ +
Sbjct: 71 DDIEVDEDDEDGDEEDDDDDDDDDDDE-EDEDDEEEDEGKGKSKSKRGS 214
>TC86145 homologue to GP|10334499|emb|CAC10211. hypothetical protein {Cicer
arietinum}, partial (91%)
Length = 1311
Score = 30.8 bits (68), Expect = 1.8
Identities = 18/52 (34%), Positives = 25/52 (47%)
Frame = +1
Query: 630 GDDDISLDLLPQFDDESEPEEDGEDGNEQHRNEDQEKEDPQAGTSQGNNANN 681
GDD L DDE + E+D D E + +ED++ D S G+ NN
Sbjct: 445 GDDFDDLHDGTDVDDEDDDEDD--DNEEDYEDEDEDAFDVHDHASVGDRENN 594
>TC89156 similar to GP|15277532|gb|AAK93949.1 HCF106 {Pisum sativum},
partial (95%)
Length = 1033
Score = 30.8 bits (68), Expect = 1.8
Identities = 21/88 (23%), Positives = 35/88 (38%)
Frame = +3
Query: 351 TEQKKKNEGTSGSDNVRDPKRQKTSGAAGGKPLHQSTLDSKSRPAEKKKGHDNVPPPQQD 410
T + T+GS DP + A + + + + A ++ + PPP++D
Sbjct: 585 TSAPPSTDSTNGSQTAVDPNGKADPSRAYSSEDYLKITEEQLKAAAAQQ-QEQTPPPEED 761
Query: 411 SSTLINRPSTPFGQAGPSSAIGGEAPPP 438
S RP P P++ I PPP
Sbjct: 762 KS---ERPIQP-----PANEIAATVPPP 821
>CA859251 similar to GP|21305823|gb DNA polymerase I {Hz-1 insect virus}
[Heliothis zea virus 1], partial (2%)
Length = 803
Score = 30.8 bits (68), Expect = 1.8
Identities = 20/47 (42%), Positives = 27/47 (56%)
Frame = -1
Query: 622 EIKDGQVVGDDDISLDLLPQFDDESEPEEDGEDGNEQHRNEDQEKED 668
E D ++V + D + DDE E +ED ED NE NED+E+ED
Sbjct: 701 ECVDVELVDNSDKVRYKMDDDDDEEEEDED-EDENE---NEDEEEED 573
>TC86146 homologue to GP|10334499|emb|CAC10211. hypothetical protein {Cicer
arietinum}, partial (95%)
Length = 1084
Score = 30.8 bits (68), Expect = 1.8
Identities = 18/52 (34%), Positives = 25/52 (47%)
Frame = +3
Query: 630 GDDDISLDLLPQFDDESEPEEDGEDGNEQHRNEDQEKEDPQAGTSQGNNANN 681
GDD L DDE + E+D D E + +ED++ D S G+ NN
Sbjct: 264 GDDFDDLHDGTDVDDEDDDEDD--DNEEDYEDEDEDAFDVHDHASVGDRENN 413
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.313 0.131 0.378
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,758,561
Number of Sequences: 36976
Number of extensions: 332586
Number of successful extensions: 1810
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 1674
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1767
length of query: 685
length of database: 9,014,727
effective HSP length: 103
effective length of query: 582
effective length of database: 5,206,199
effective search space: 3030007818
effective search space used: 3030007818
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)
Lotus: description of TM0037a.11