TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0036c.6
         (70 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

BG583008 similar to PIR|T52113|T521 probable transcription co-ac...    99  4e-22
TC82483 weakly similar to GP|13699910|dbj|BAB41214. putative tra...    77  2e-15
CA859486 weakly similar to PIR|T39903|T399 serine-rich protein -...    56  3e-09
TC77272 weakly similar to GP|19110917|gb|AAL85347.1 EDS1-like pr...    27  2.0
TC80471 weakly similar to GP|17529094|gb|AAL38757.1 unknown prot...    25  4.4
TC77051 similar to GP|16417950|gb|AAL18927.1 mevalonate disphosp...    25  4.4
BG644394 similar to PIR|S51324|S51 pullulanase - spinach, partia...    25  7.5
TC85451 similar to PIR|T06239|T06239 probable glutathione transf...    24  9.8

>BG583008 similar to PIR|T52113|T521 probable transcription co-activator KIWI
           [imported] - Arabidopsis thaliana, partial (50%)
          Length = 666

 Score = 98.6 bits (244), Expect = 4e-22
 Identities = 48/69 (69%), Positives = 53/69 (76%)
 Frame = +3

Query: 1   DPDSIVVCEISKNRRVSVRNWQGRIVVDIREFYVKDGKQMPGKKGISLTMDQWNVLRNHI 60
           D    +V EI KNRRVSVR W  +  VDIREFY KDGKQ+PGKKGISL M+QW VLR+HI
Sbjct: 156 DDSGDIVFEIGKNRRVSVRTWNKQPWVDIREFYTKDGKQLPGKKGISLNMEQWIVLRDHI 335

Query: 61  EEIDKAVNE 69
           EEID AV E
Sbjct: 336 EEIDNAVKE 362


>TC82483 weakly similar to GP|13699910|dbj|BAB41214. putative
           transcriptional coactivator {Brassica rapa}, partial
           (79%)
          Length = 938

 Score = 76.6 bits (187), Expect = 2e-15
 Identities = 30/69 (43%), Positives = 50/69 (71%)
 Frame = +2

Query: 1   DPDSIVVCEISKNRRVSVRNWQGRIVVDIREFYVKDGKQMPGKKGISLTMDQWNVLRNHI 60
           D   +V+CE+ K R+V++++++GR  V IREFY KDGK++P  KGISLT +QW   +  +
Sbjct: 320 DSGDLVICELGKKRKVTIQDFKGRTFVSIREFYTKDGKELPSSKGISLTQEQWLAFKKIV 499

Query: 61  EEIDKAVNE 69
            +I++A+ +
Sbjct: 500 PDIEQAIQK 526


>CA859486 weakly similar to PIR|T39903|T399 serine-rich protein - fission
           yeast (Schizosaccharomyces pombe), partial (3%)
          Length = 606

 Score = 55.8 bits (133), Expect = 3e-09
 Identities = 25/60 (41%), Positives = 41/60 (67%), Gaps = 1/60 (1%)
 Frame = +2

Query: 9   EISKNRRVSVRNWQGRIVVDIREFYVK-DGKQMPGKKGISLTMDQWNVLRNHIEEIDKAV 67
           ++S+ +RV+VR ++  I++D REF+   DG   P KKGI+L  +QWN L+  I +ID+ +
Sbjct: 263 KLSEKKRVTVRKFKNMILIDFREFFTNSDGDSNPTKKGIALQPEQWNKLKEFISDIDEEI 442


>TC77272 weakly similar to GP|19110917|gb|AAL85347.1 EDS1-like protein
            {Nicotiana benthamiana}, partial (51%)
          Length = 2168

 Score = 26.6 bits (57), Expect = 2.0
 Identities = 9/25 (36%), Positives = 17/25 (68%)
 Frame = +1

Query: 39   QMPGKKGISLTMDQWNVLRNHIEEI 63
            ++ G+KGI +  D WN+LR  ++ +
Sbjct: 1669 KVEGQKGIGIHKDGWNILRRGMKAV 1743


>TC80471 weakly similar to GP|17529094|gb|AAL38757.1 unknown protein
           {Arabidopsis thaliana}, partial (73%)
          Length = 812

 Score = 25.4 bits (54), Expect = 4.4
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +3

Query: 44  KGISLTMDQWNVLRNHIEEIDKAVNE 69
           K I     Q  +LR H++ +D AVN+
Sbjct: 429 KSIDSLASQLKILRRHVDVLDSAVNK 506


>TC77051 similar to GP|16417950|gb|AAL18927.1 mevalonate disphosphate
           decarboxylase {Hevea brasiliensis}, partial (98%)
          Length = 1739

 Score = 25.4 bits (54), Expect = 4.4
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = +1

Query: 23  GRIVVDIREFYVKDGKQMPGKKGISLTMDQWNVLRNHI 60
           GR    +RE   +       KKGI +T + W+ L  HI
Sbjct: 400 GRFQSCLREIRARACDVEDNKKGIKITKEDWSKLYVHI 513


>BG644394 similar to PIR|S51324|S51 pullulanase - spinach, partial (14%)
          Length = 578

 Score = 24.6 bits (52), Expect = 7.5
 Identities = 13/29 (44%), Positives = 14/29 (47%), Gaps = 3/29 (10%)
 Frame = +2

Query: 34  VKDGKQMPGKKGIS---LTMDQWNVLRNH 59
           VKDG+  PGK  IS     MD W     H
Sbjct: 230 VKDGQCYPGKSTIS*YWSIMDSWTYSNEH 316


>TC85451 similar to PIR|T06239|T06239 probable glutathione transferase (EC
           2.5.1.18)  2 4-D inducible - soybean, complete
          Length = 1155

 Score = 24.3 bits (51), Expect = 9.8
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = +3

Query: 26  VVDIREFYVKDGKQMPGKKGISLTMDQWNVLRNH 59
           +V+IR+   K G +  G   +SL +D W V RNH
Sbjct: 774 IVEIRK---KFGLE*VGDVRLSLCLDVW*VWRNH 866


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.317    0.136    0.403 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,054,001
Number of Sequences: 36976
Number of extensions: 19859
Number of successful extensions: 86
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 86
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 86
length of query: 70
length of database: 9,014,727
effective HSP length: 46
effective length of query: 24
effective length of database: 7,313,831
effective search space: 175531944
effective search space used: 175531944
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 51 (24.3 bits)