TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0036c.5
         (55 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC82880 similar to GP|9858483|gb|AAG01054.1| resistance protein ...    26  2.8
TC77994 weakly similar to PIR|T39903|T39903 serine-rich protein ...    25  8.0

>TC82880 similar to GP|9858483|gb|AAG01054.1| resistance protein MG55
           {Glycine max}, partial (46%)
          Length = 1238

 Score = 26.2 bits (56), Expect = 2.8
 Identities = 11/29 (37%), Positives = 18/29 (61%)
 Frame = -1

Query: 16  FVVIMIRSDYGTLNGKESLTLGCEQGGKF 44
           FV+  ++ DY +L  ++  TL C Q GK+
Sbjct: 848 FVIDRLKPDYCSLYPRKQETLTCHQKGKY 762


>TC77994 weakly similar to PIR|T39903|T39903 serine-rich protein - fission
            yeast (Schizosaccharomyces pombe), partial (5%)
          Length = 1571

 Score = 24.6 bits (52), Expect = 8.0
 Identities = 11/34 (32%), Positives = 16/34 (46%)
 Frame = -1

Query: 5    DWAQLVGKNNDFVVIMIRSDYGTLNGKESLTLGC 38
            DW + VG + DF   M+R+       +    LGC
Sbjct: 1283 DWKKTVGGSRDFYYFMLRASMIRAEIRAEGLLGC 1182


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.322    0.143    0.441 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,454,365
Number of Sequences: 36976
Number of extensions: 11606
Number of successful extensions: 36
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of query: 55
length of database: 9,014,727
effective HSP length: 31
effective length of query: 24
effective length of database: 7,868,471
effective search space: 188843304
effective search space used: 188843304
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (24.3 bits)