TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0032.10
         (216 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC85918 similar to GP|13562014|gb|AAK30610.1 fibroin 1 {Plectreu...    29  1.2
TC78845 similar to GP|17473709|gb|AAL38308.1 unknown protein {Ar...    28  2.1
AJ498406 similar to GP|21689829|gb| unknown protein {Arabidopsis...    28  3.5
TC92554 similar to GP|9758876|dbj|BAB09430.1 disease resistance ...    27  4.6
TC77149 similar to GP|3643249|gb|AAC36740.1| thaumatin-like prot...    27  7.8
TC86619 similar to GP|16648824|gb|AAL25602.1 AT4g18950/F13C5_120...    27  7.8
TC93438 similar to GP|23093480|gb|AAF49729.3 CG13475-PA {Drosoph...    27  7.8

>TC85918 similar to GP|13562014|gb|AAK30610.1 fibroin 1 {Plectreurys tristis},
            partial (8%)
          Length = 4117

 Score = 29.3 bits (64), Expect = 1.2
 Identities = 25/78 (32%), Positives = 39/78 (49%), Gaps = 4/78 (5%)
 Frame = -1

Query: 103  VSTAVEIVIGLEIPQV--IIVCDSLDVIRLI--IDPVKFVKSEKALYEKNFARTVKVRPK 158
            V+T VEI   ++ P V  + + +S+ V  ++  +DP + VK E    E     TVK  P 
Sbjct: 1747 VATEVEITKTVKEPLVTEVDLTESVKVKPVVTEVDPREMVKEEPVATEVQATETVKEEPV 1568

Query: 159  RTWKVRPSRTWKNLQIPT 176
             T +V P+ T K   + T
Sbjct: 1567 AT-EVEPTETVKGEPVVT 1517



 Score = 28.9 bits (63), Expect = 1.6
 Identities = 17/54 (31%), Positives = 25/54 (45%)
 Frame = -1

Query: 132  IDPVKFVKSEKALYEKNFARTVKVRPKRTWKVRPSRTWKNLQIPTPYSSRFTIR 185
            +DP + VK E    E     TVK  P  T +V P+ T K   + T   +  T++
Sbjct: 2230 VDPTETVKEEPLATEAEATETVKEEPVAT-EVEPTETVKEEPVATEVEATETVK 2072


>TC78845 similar to GP|17473709|gb|AAL38308.1 unknown protein {Arabidopsis
           thaliana}, partial (26%)
          Length = 702

 Score = 28.5 bits (62), Expect = 2.1
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +1

Query: 164 RPSRTWKNLQIPTPYSSRFTIR 185
           RP R W+NL++ +P  SR T+R
Sbjct: 400 RPRRFWRNLRLRSPLLSRGTVR 465


>AJ498406 similar to GP|21689829|gb| unknown protein {Arabidopsis thaliana},
           partial (13%)
          Length = 482

 Score = 27.7 bits (60), Expect = 3.5
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = -3

Query: 136 KFVKSEKALYEKNFARTVKVRPKRTWKVRPSRTWKNL 172
           KFV   + +Y  +   T+  +PKRT  ++P +T  NL
Sbjct: 393 KFVHLHERVYTSSEPNTILQQPKRTKIIKPYKTIHNL 283


>TC92554 similar to GP|9758876|dbj|BAB09430.1 disease resistance protein
           {Arabidopsis thaliana}, partial (7%)
          Length = 1043

 Score = 27.3 bits (59), Expect = 4.6
 Identities = 12/43 (27%), Positives = 24/43 (54%)
 Frame = -3

Query: 84  SINMGSRAYANYFLAQFTTVSTAVEIVIGLEIPQVIIVCDSLD 126
           S+ + ++ Y +Y    F   ++A+ ++    IPQ+ I+C S D
Sbjct: 948 SLTLAAK*YLSY*YETFVNTASAMVVLPMPPIPQIPIICTSAD 820


>TC77149 similar to GP|3643249|gb|AAC36740.1| thaumatin-like protein
           precursor Mdtl1 {Malus x domestica}, partial (88%)
          Length = 976

 Score = 26.6 bits (57), Expect = 7.8
 Identities = 11/23 (47%), Positives = 15/23 (64%)
 Frame = +2

Query: 173 QIPTPYSSRFTIRSGAVWKIGQF 195
           +IP+P+S RF  R+G     GQF
Sbjct: 221 EIPSPWSGRFWARTGCSTNNGQF 289


>TC86619 similar to GP|16648824|gb|AAL25602.1 AT4g18950/F13C5_120 {Arabidopsis
            thaliana}, partial (77%)
          Length = 1505

 Score = 26.6 bits (57), Expect = 7.8
 Identities = 10/16 (62%), Positives = 13/16 (80%)
 Frame = +3

Query: 158  KRTWKVRPSRTWKNLQ 173
            KR WKVRP R ++NL+
Sbjct: 1017 KRRWKVRPLRCFQNLE 1064


>TC93438 similar to GP|23093480|gb|AAF49729.3 CG13475-PA {Drosophila
           melanogaster}, partial (2%)
          Length = 1022

 Score = 26.6 bits (57), Expect = 7.8
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +3

Query: 156 RPKRTWKVRPSRTWKNLQIPT 176
           R K+TW +RP R W++  I T
Sbjct: 762 RHKKTWMLRPQRRWRSHTIFT 824


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.322    0.136    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,162,112
Number of Sequences: 36976
Number of extensions: 74690
Number of successful extensions: 308
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 304
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 307
length of query: 216
length of database: 9,014,727
effective HSP length: 92
effective length of query: 124
effective length of database: 5,612,935
effective search space: 696003940
effective search space used: 696003940
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 56 (26.2 bits)