TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0031.15
         (168 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

BE204547 weakly similar to GP|10177725|dbj gene_id:K9B18.4~unkno...   187  2e-48
TC78170 similar to GP|17979531|gb|AAL50100.1 At1g76150/T23E18_38...    35  0.011
TC85747 homologue to SP|P81406|GAPN_PEA NADP-dependent glycerald...    28  2.3
AL372220 similar to GP|4914424|emb| Inositol monophosphatase-lik...    27  3.0
BG455075 similar to GP|5139541|emb nodulin26-like major intrinsi...    26  6.6
TC80496 similar to GP|7939547|dbj|BAA95750.1 gene_id:K5K13.10~un...    26  6.6
TC79864                                                                26  8.6
AW585823                                                               26  8.6

>BE204547 weakly similar to GP|10177725|dbj gene_id:K9B18.4~unknown protein
           {Arabidopsis thaliana}, partial (54%)
          Length = 644

 Score =  187 bits (475), Expect = 2e-48
 Identities = 96/119 (80%), Positives = 104/119 (86%), Gaps = 1/119 (0%)
 Frame = +3

Query: 1   MLIRSL-VSSKLQSLSLRCFSSAATPQVLKPGDVLRKARAFTEEDVLHYSKVTHDLNPLH 59
           ML RSL  SSKLQ LSLRCFSS  T  VLKPGDVL+K R FTEEDVL YSKV+HD NPLH
Sbjct: 294 MLFRSLHSSSKLQYLSLRCFSS--TTHVLKPGDVLKKTRVFTEEDVLQYSKVSHDYNPLH 467

Query: 60  TDSAAAQNVGFEGPLVHGMLVASLFPHIISSHFPGAVYVSQSLNFKFPVYIGDQVIGEV 118
            DSAAA++VGF+GPLVHGMLVASLFPHIISSHFP AVYVSQ+LNFK PVYIGDQ++GEV
Sbjct: 468 ADSAAARSVGFDGPLVHGMLVASLFPHIISSHFPAAVYVSQTLNFKLPVYIGDQIVGEV 644


>TC78170 similar to GP|17979531|gb|AAL50100.1 At1g76150/T23E18_38
           {Arabidopsis thaliana}, partial (90%)
          Length = 955

 Score = 35.4 bits (80), Expect = 0.011
 Identities = 29/95 (30%), Positives = 46/95 (47%), Gaps = 3/95 (3%)
 Frame = +1

Query: 50  KVTHDLNPLHTDSAAAQNVGFEGPLVHGMLVASLFPH-IISSHFPGAVYVSQSLNFKF-- 106
           +++ D NPLH+D   A+  GF  P++HG+         II S   G     +S+  +F  
Sbjct: 637 RLSGDYNPLHSDPLFAKVAGFSQPILHGLCTLGFAVRAIIKSICKGDPDRIKSITGRFLL 816

Query: 107 PVYIGDQVIGEVQATNLRANKNRYLVKFKTRCIKS 141
            VY G+ ++ E+     R    R LVK + R + S
Sbjct: 817 HVYPGETLVTEMWLEGSRV-IYRTLVKERKRTVLS 918


>TC85747 homologue to SP|P81406|GAPN_PEA NADP-dependent
           glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.9),
           complete
          Length = 1889

 Score = 27.7 bits (60), Expect = 2.3
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = -1

Query: 72  GPLVHGMLVASLFPHIISSHFPGAVYVSQS 101
           G LV G+++A+LFP +   H P A Y+  S
Sbjct: 290 GFLVVGLMIATLFPEVDFFHSPSA*YLYTS 201


>AL372220 similar to GP|4914424|emb| Inositol monophosphatase-like protein
           {Arabidopsis thaliana}, partial (25%)
          Length = 462

 Score = 27.3 bits (59), Expect = 3.0
 Identities = 19/64 (29%), Positives = 29/64 (44%)
 Frame = +3

Query: 3   IRSLVSSKLQSLSLRCFSSAATPQVLKPGDVLRKARAFTEEDVLHYSKVTHDLNPLHTDS 62
           IR++ SS      L  FS  A       GDV+RK       D++H     +DL+P+    
Sbjct: 183 IRAMSSSSSPPHQLNHFSDVANKAANAAGDVIRKYFRKNNFDIIH----KNDLSPVTIAD 350

Query: 63  AAAQ 66
            +A+
Sbjct: 351 QSAE 362


>BG455075 similar to GP|5139541|emb nodulin26-like major intrinsic protein
           {Pisum sativum}, partial (59%)
          Length = 652

 Score = 26.2 bits (56), Expect = 6.6
 Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
 Frame = +3

Query: 78  MLVASLFPHIISSHFPGAVYVSQSLNFKFPV-----YIGDQVIGEVQATNL 123
           M++     HI  +HF  AV ++ +   +FP+     YI  QV+G   A+ +
Sbjct: 306 MVLVYSIGHISGAHFNPAVTIAHTTTGRFPLKQLPAYIIAQVVGSTLASGV 458


>TC80496 similar to GP|7939547|dbj|BAA95750.1 gene_id:K5K13.10~unknown
          protein {Arabidopsis thaliana}, partial (38%)
          Length = 813

 Score = 26.2 bits (56), Expect = 6.6
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = +3

Query: 45 VLHYSKVTHDLNPLHTDSAAAQNVGFEGPLVHGMLVASLFPHI 87
          +LH++      + LH   +   N  FEG L+HG +    F H+
Sbjct: 9  LLHFAVSFQSHHHLHPPLSTCSN-NFEGKLLHGCISLRYFQHL 134


>TC79864 
          Length = 1551

 Score = 25.8 bits (55), Expect = 8.6
 Identities = 11/17 (64%), Positives = 11/17 (64%)
 Frame = -3

Query: 44  DVLHYSKVTHDLNPLHT 60
           D L YS  T DLNP HT
Sbjct: 874 DFLKYSSSTFDLNPKHT 824


>AW585823 
          Length = 520

 Score = 25.8 bits (55), Expect = 8.6
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = -2

Query: 1   MLIRSLVSSKLQSLSLRCFSSAATPQVLKPGDVLRKARAF 40
           +LI  ++S     LSL CF+SAA+P  L        + +F
Sbjct: 264 LLICRVMSEDQVDLSLFCFTSAASPSSLAASRTSASSNSF 145


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.320    0.134    0.378 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,740,891
Number of Sequences: 36976
Number of extensions: 58421
Number of successful extensions: 312
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 311
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 311
length of query: 168
length of database: 9,014,727
effective HSP length: 89
effective length of query: 79
effective length of database: 5,723,863
effective search space: 452185177
effective search space used: 452185177
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)