TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0028b.5
         (1389 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC81082 similar to GP|17385678|dbj|BAB78631. putative co-repress...   670  0.0
TC83407 similar to GP|17385678|dbj|BAB78631. putative co-repress...   320  4e-96
TC84375 similar to GP|17385678|dbj|BAB78631. putative co-repress...   306  3e-83
BE326062 similar to GP|17385678|db putative co-repressor protein...   201  5e-69
BF633689 similar to GP|9945050|gb Similar to Arabidopsis chromos...   240  2e-63
TC93209 similar to PIR|T51447|T51447 transcription regulator-lik...   177  1e-59
AI737486 similar to GP|6094552|gb unknown protein {Arabidopsis t...   166  8e-41
AW775273 similar to PIR|T51447|T5 transcription regulator-like p...   154  2e-37
BE205344 similar to PIR|T00649|T0 hypothetical protein F3I6.12 -...   109  6e-24
CA922071 similar to GP|8247350|emb| pSbaNS5 protein {Sorghum bic...   102  1e-21
TC93631 similar to EGAD|119721|127958 hypothetical protein F54D1...    95  2e-19
BF648188 similar to GP|21903805|gb| hypothetical protein {Strept...    79  9e-15
TC88447 similar to GP|21593015|gb|AAM64964.1 unknown {Arabidopsi...    45  2e-04
TC81158 similar to GP|9280664|gb|AAF86533.1| F21B7.15 {Arabidops...    41  0.003
TC89483 similar to GP|18377662|gb|AAL66981.1 unknown protein {Ar...    40  0.006
TC77638 similar to GP|20161455|dbj|BAB90379. ankyrin-like protei...    40  0.008
TC77946 homologue to GP|10334491|emb|CAC10207. putative splicing...    40  0.008
BE325350 weakly similar to GP|13702821|gb| putative snRNP protei...    39  0.011
TC80893 similar to GP|4557063|gb|AAD22502.1| expressed protein {...    37  0.070
TC77925 similar to GP|18700163|gb|AAL77693.1 AT4g02720/T10P11_1 ...    37  0.070

>TC81082 similar to GP|17385678|dbj|BAB78631. putative co-repressor protein
            {Oryza sativa (japonica cultivar-group)}, partial (20%)
          Length = 1461

 Score =  670 bits (1728), Expect(2) = 0.0
 Identities = 337/435 (77%), Positives = 373/435 (85%)
 Frame = +3

Query: 907  QGGDSTRPGTFTNGATTGGTEVHRYQEQSIRHFKSEREEGELSPNGDMEEDNFAVYENSG 966
            +GGDS R    TNGA  GGTEV RYQE+S   FKSEREEGELSPNGD EEDNFAVY ++G
Sbjct: 51   EGGDSARLYASTNGAVAGGTEVCRYQEESNPQFKSEREEGELSPNGDFEEDNFAVYGDAG 230

Query: 967  LDAGHKGKGGDMSQKYQSRHGEQVCCEAKGENDVDADDEGEESPHRSSDDSENASENVDV 1026
             +A HKG  G + ++YQ+R GEQVC EA+GEN  DADDEGEESP RSS+ SENAS NVDV
Sbjct: 231  SEAVHKGNDGGLKRQYQNRRGEQVCGEARGENYADADDEGEESPQRSSEGSENASGNVDV 410

Query: 1027 SGSESADGEECSREEHEDREHDNKAESEGEAEGMVDAHDVEGDGMSLTISERFLQTVKPL 1086
            SGSESADGEECS+EEH+D EHD+KAESEGEAEGM DAHDVEGDG SL  SERFL  VKPL
Sbjct: 411  SGSESADGEECSQEEHDDGEHDDKAESEGEAEGMADAHDVEGDGTSLPFSERFLLNVKPL 590

Query: 1087 AKYVPAALHEKDRNSQVFYGSDSFYVLFRLHQTLYERIQSAKFNSSSAEKKWKASHDTGS 1146
            AK+VP  LH +D+NS+VFYG+DSFYVL RLHQTLYERI +AK NSSS E+KWKAS++T S
Sbjct: 591  AKHVPPVLHVEDKNSRVFYGNDSFYVLIRLHQTLYERIHAAKVNSSSTERKWKASNNTSS 770

Query: 1147 TDQYDRFMNALYSLLDGSSDNTKFEDDCRAIIGTQSYLLFTLDKLIYKLVKQLQAIASEE 1206
            TDQYDRFM ALYSLLDGSSDN+KFEDDCRAIIGTQSYLLFTLDKLIYKLVKQLQA+AS+E
Sbjct: 771  TDQYDRFMIALYSLLDGSSDNSKFEDDCRAIIGTQSYLLFTLDKLIYKLVKQLQAVASDE 950

Query: 1207 MDNKLLQLYAYEKSRKLGKFIDIVYHENACVILHEENIYRIEYSPGPKKLSIQLMDCGHD 1266
            MDNKLLQLYAYEKSRK GKF+DIVYHENA V+LH+ENIYRIEYSP PK LSIQLMDCG++
Sbjct: 951  MDNKLLQLYAYEKSRKPGKFVDIVYHENARVLLHDENIYRIEYSPKPKTLSIQLMDCGNE 1130

Query: 1267 KPEVTAVSVDPKFSTYLHNDFLSVVPDKKEKSRLFLKRNKHRYAGSSEFSSQAMEGLQVF 1326
            K EVTAV VDP FS YLHNDFLS+  DK  K  +FLKRNK  YA S EFSS+AMEGLQ+ 
Sbjct: 1131 KHEVTAVLVDPNFSAYLHNDFLSIASDK--KLGIFLKRNKRGYACSDEFSSEAMEGLQII 1304

Query: 1327 NGLECKIACSSSKVS 1341
            NGLECKIA +SSKVS
Sbjct: 1305 NGLECKIASNSSKVS 1349



 Score = 46.6 bits (109), Expect(2) = 0.0
 Identities = 22/36 (61%), Positives = 27/36 (74%)
 Frame = +1

Query: 1342 YVLDTEDVLYRKKSKRRILHPTSSCNEPAKSSNIRS 1377
            YVL+TED L+R +S+R+ LH  SSC E  K SNIRS
Sbjct: 1351 YVLNTEDFLFRTRSRRKALHLKSSCYEQRKPSNIRS 1458


>TC83407 similar to GP|17385678|dbj|BAB78631. putative co-repressor protein
           {Oryza sativa (japonica cultivar-group)}, partial (15%)
          Length = 921

 Score =  320 bits (820), Expect(3) = 4e-96
 Identities = 177/277 (63%), Positives = 210/277 (74%), Gaps = 13/277 (4%)
 Frame = +3

Query: 390 VSNKEVSGLKI---KDKHFLKPINELDLSNCDRCTPSYRLLPKNYPIPIASYKSKIGAKV 446
           +SNK+VS  K+   KDK+  KPINELDLSNC++CTPSYRLLPKNYPIP+AS K+++GAKV
Sbjct: 81  ISNKDVSIPKVSLSKDKYVGKPINELDLSNCEQCTPSYRLLPKNYPIPLASQKTELGAKV 260

Query: 447 LNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDML------LESVNLTTKRVE 500
           LNDHWVSVTSGSEDYSFKHMRKNQYEES          L+++      ++ V    +  +
Sbjct: 261 LNDHWVSVTSGSEDYSFKHMRKNQYEESXV*MXKTT-GLNLICC*SL*MQQVRKLKRS*K 437

Query: 501 EL----FEKINNNVIKGDRPVRIDEHLTALNLRCIERLYGDHGLDVMEVLRKNAPLALPV 556
           +L    F++I   V++    + I   L ALN   +       G DVMEVL+KNA LALPV
Sbjct: 438 KLMMI*FQEIFQFVLRSIYQL*I---LGALNDYMVTM-----GFDVMEVLKKNASLALPV 593

Query: 557 ILTRLKQKQDEWARCRADFSKVWAEIYAKNYHKSLDHRSFYFKQQDTKRLSTKALLAEVK 616
           ILTRLKQKQ+EWARCR DF+KVWAEIYAKNYHKSLDHRSFYFKQQDTK LSTKALL E+K
Sbjct: 594 ILTRLKQKQEEWARCREDFNKVWAEIYAKNYHKSLDHRSFYFKQQDTKSLSTKALLGEIK 773

Query: 617 EISEKKHKEDDVLLAIAAGSRQPIIPNLEFHYPDLDI 653
           EISE+K K DDVLLAIAAG+R+ I+PNLEF YPD +I
Sbjct: 774 EISEQKRKVDDVLLAIAAGNRRXILPNLEFEYPDPEI 884



 Score = 45.8 bits (107), Expect(3) = 4e-96
 Identities = 20/25 (80%), Positives = 23/25 (92%)
 Frame = +2

Query: 364 RDRDRYRDDGMKERDRECRERDRST 388
           +DRDR RDDG+KERDRE RERD+ST
Sbjct: 2   KDRDRGRDDGVKERDRELRERDKST 76



 Score = 27.3 bits (59), Expect(3) = 4e-96
 Identities = 10/11 (90%), Positives = 11/11 (99%)
 Frame = +1

Query: 655 EDLYQLVKYSC 665
           EDLYQL+KYSC
Sbjct: 889 EDLYQLIKYSC 921


>TC84375 similar to GP|17385678|dbj|BAB78631. putative co-repressor protein
            {Oryza sativa (japonica cultivar-group)}, partial (10%)
          Length = 587

 Score =  306 bits (785), Expect = 3e-83
 Identities = 154/197 (78%), Positives = 172/197 (87%), Gaps = 2/197 (1%)
 Frame = +3

Query: 1077 ERFLQTVKPLAKYVPAALHEKDRNSQVFYGSDSFYVLFRLHQTLYERIQSAKFNSSSAEK 1136
            E FL T KPL KYV    H K+ N Q+FYG+D+FYVLFRLHQTLYERI+SAK NSSSAEK
Sbjct: 3    EGFLLTAKPLVKYVSPVFHGKEENVQIFYGNDAFYVLFRLHQTLYERIRSAKINSSSAEK 182

Query: 1137 KWKASHDTGSTDQYDRFMNALYSLLDGSSDNTKFEDDCRAIIGTQSYLLFTLDKLIYKLV 1196
            KW+AS+DT STD+Y RFMN+LYSLLDGSSDN+KFEDDCRAIIGTQSY+LFTLDKLIYKLV
Sbjct: 183  KWRASNDTSSTDRYARFMNSLYSLLDGSSDNSKFEDDCRAIIGTQSYVLFTLDKLIYKLV 362

Query: 1197 KQLQAIAS--EEMDNKLLQLYAYEKSRKLGKFIDIVYHENACVILHEENIYRIEYSPGPK 1254
            KQLQA+AS  +EMDNKLLQLYAYE+SRK G F D+VYHENA V+LH+ENIYRIE S  P 
Sbjct: 363  KQLQAVASGTDEMDNKLLQLYAYEQSRKSGSFFDVVYHENARVLLHDENIYRIECS--PT 536

Query: 1255 KLSIQLMDCGHDKPEVT 1271
            +LSIQLMD GHDKPEVT
Sbjct: 537  RLSIQLMDYGHDKPEVT 587


>BE326062 similar to GP|17385678|db putative co-repressor protein {Oryza
           sativa (japonica cultivar-group)}, partial (1%)
          Length = 632

 Score =  201 bits (510), Expect(2) = 5e-69
 Identities = 106/158 (67%), Positives = 122/158 (77%), Gaps = 3/158 (1%)
 Frame = +2

Query: 171 DHDRGLLRAEKEQRRRVEKEKDHRED-GKRDWERDGRDHEHDGGQYRERLSHKRKSDRKA 229
           DHD G LRAEKE++RR+EKEKD +ED G+R+ ERD RD+EHD G+ RERLSHKRKSD KA
Sbjct: 5   DHDGGSLRAEKERKRRMEKEKDRKEDRGRRERERDYRDYEHDRGRDRERLSHKRKSDHKA 184

Query: 230 EDFGAEPLLDADEFFGTRPMSSTCDDKKSLKTKYPEEFAFCDKVKEKLRNPDGYQEFLKC 289
           ED GAEPLLDAD+ FGT+                 +E AFCDKVKE+L+NP  YQEFLKC
Sbjct: 185 EDSGAEPLLDADQNFGTQ----------------NQELAFCDKVKERLQNPGDYQEFLKC 316

Query: 290 LHIYSKEIITQQELQSLVG--DLLGKYPDLMEEFNEFL 325
           +HIY+KEIIT+QELQSLVG   LLG YPDLME FNEFL
Sbjct: 317 VHIYNKEIITRQELQSLVGGCGLLGDYPDLMESFNEFL 430



 Score = 80.5 bits (197), Expect(2) = 5e-69
 Identities = 39/51 (76%), Positives = 41/51 (79%)
 Frame = +3

Query: 324 FLVQAEKNDGGFLAGVMNKKSLWIEGPGLKPMKAEDRDRDRDRDRYRDDGM 374
           F +QAEKN GGFLAGVMN+KSLWIEG GLKPM AE RDRDRD DR    GM
Sbjct: 426 FCLQAEKNGGGFLAGVMNRKSLWIEGRGLKPMNAEQRDRDRDDDRGSVTGM 578


>BF633689 similar to GP|9945050|gb Similar to Arabidopsis chromosome I BAC
           genomic sequence (AC002396); unknown protein {Oryza
           sativa}, partial (12%)
          Length = 398

 Score =  240 bits (613), Expect = 2e-63
 Identities = 113/130 (86%), Positives = 122/130 (92%)
 Frame = +2

Query: 552 LALPVILTRLKQKQDEWARCRADFSKVWAEIYAKNYHKSLDHRSFYFKQQDTKRLSTKAL 611
           LALPVILTRLKQKQ+EWARCRADF KVWAEIYAKNYHKSLDHRSFYFKQQDT+ LSTKAL
Sbjct: 8   LALPVILTRLKQKQEEWARCRADFGKVWAEIYAKNYHKSLDHRSFYFKQQDTRSLSTKAL 187

Query: 612 LAEVKEISEKKHKEDDVLLAIAAGSRQPIIPNLEFHYPDLDIHEDLYQLVKYSCGELCTA 671
           L E+KEISEKKHKEDDVLLAIAAG+R+PI+PNLEF Y D DIHEDLY+L+KYSC ELCT 
Sbjct: 188 LTEIKEISEKKHKEDDVLLAIAAGNRRPILPNLEFEYIDPDIHEDLYRLIKYSCAELCTT 367

Query: 672 EQLDKVMKVW 681
           EQLDKVMK+W
Sbjct: 368 EQLDKVMKIW 397


>TC93209 similar to PIR|T51447|T51447 transcription regulator-like protein -
            Arabidopsis thaliana, partial (10%)
          Length = 721

 Score =  177 bits (449), Expect(2) = 1e-59
 Identities = 109/175 (62%), Positives = 125/175 (71%), Gaps = 8/175 (4%)
 Frame = +3

Query: 993  EAKGENDVDADDEGEESPHRSSDDSENASE-NVDVSGSESADGEECSREEH--EDREHDN 1049
            EA G+ND DADDE          DSEN SE   DVSGSESA G+ECSRE+H  ED EHD+
Sbjct: 99   EAGGDNDADADDE----------DSENVSEAGEDVSGSESA-GDECSREDHEEEDMEHDD 245

Query: 1050 ---KAESEGEAEGMVDAHDVEG-DGMSLTISERFLQTVKPLAKYVPAALHEKD-RNSQVF 1104
               KAESEGEAEGM DA    G DG SL +SERFL TVKPL K+V A    +D ++S+VF
Sbjct: 246  VDGKAESEGEAEGMCDADAQTGVDGSSLPLSERFLSTVKPLTKHVSAVSFVEDVKDSRVF 425

Query: 1105 YGSDSFYVLFRLHQTLYERIQSAKFNSSSAEKKWKASHDTGSTDQYDRFMNALYS 1159
            YG+D F+VLFRLHQ LYERI SAK NS+SAE KWK + D  STD Y RFM+ALY+
Sbjct: 426  YGNDDFFVLFRLHQILYERILSAKENSTSAEIKWK-TKDASSTDLYARFMDALYN 587



 Score = 72.8 bits (177), Expect(2) = 1e-59
 Identities = 32/44 (72%), Positives = 40/44 (90%)
 Frame = +1

Query: 1160 LLDGSSDNTKFEDDCRAIIGTQSYLLFTLDKLIYKLVKQLQAIA 1203
            LLDGS +N KFE++CRAI+G QSY+LFTLDKLIYKL++QLQ +A
Sbjct: 589  LLDGSPENAKFENECRAILGNQSYVLFTLDKLIYKLIRQLQTVA 720


>AI737486 similar to GP|6094552|gb unknown protein {Arabidopsis thaliana},
           partial (9%)
          Length = 473

 Score =  166 bits (419), Expect = 8e-41
 Identities = 92/183 (50%), Positives = 118/183 (64%)
 Frame = +3

Query: 270 CDKVKEKLRNPDGYQEFLKCLHIYSKEIITQQELQSLVGDLLGKYPDLMEEFNEFLVQAE 329
           CDKVKEKL + + YQ FLKCL+I+   II + +LQ+LV DLLGK+ DLM EFN+FL + E
Sbjct: 3   CDKVKEKLSSAEDYQTFLKCLNIFGNGIIKKNDLQNLVTDLLGKHSDLMSEFNDFLERCE 182

Query: 330 KNDGGFLAGVMNKKSLWIEGPGLKPMKAEDRDRDRDRDRYRDDGMKERDRECRERDRSTV 389
             D GFLAGVM+KK L  +G   +  K ED++  R+      DG KE++R          
Sbjct: 183 NID-GFLAGVMSKKPLAGDGHLSRSSKLEDKEHRRE-----TDGGKEKER---------- 314

Query: 390 VSNKEVSGLKIKDKHFLKPINELDLSNCDRCTPSYRLLPKNYPIPIASYKSKIGAKVLND 449
                      K+K+  K I ELDLS+C RC+PSYRLLP +YPIP AS +S++GA VLND
Sbjct: 315 ----------YKEKYMGKSIQELDLSDCKRCSPSYRLLPADYPIPTASQRSELGAHVLND 464

Query: 450 HWV 452
           HWV
Sbjct: 465 HWV 473


>AW775273 similar to PIR|T51447|T5 transcription regulator-like protein -
           Arabidopsis thaliana, partial (11%)
          Length = 689

 Score =  154 bits (390), Expect = 2e-37
 Identities = 78/124 (62%), Positives = 96/124 (76%)
 Frame = +1

Query: 2   DTAGVIARVKELFEGHRDLILGFNTFLPKGYEITLPLEDEQPPAKKPVEFEEAINFVNKI 61
           DT GVIA VKELF+GH +LI GFN +LPKG+EI L  ++++   KK VEFE+AI+FV KI
Sbjct: 274 DTHGVIAAVKELFKGHNNLIYGFNAYLPKGHEIRL--DEDEASQKKKVEFEDAISFVGKI 447

Query: 62  KARFEGDDHVYKSFLDILNMYRKENKCINEVYHEVAVLFQGHADLLDEFTHFLPDASAAA 121
           K RF+ ++HVYKSFLDILNMYR E+K I EVY EVA LF+ H DLL+EFT FLPD S   
Sbjct: 448 KNRFQNEEHVYKSFLDILNMYR*EHKTITEVYSEVATLFKDHNDLLEEFTRFLPDNSLEP 627

Query: 122 SSYY 125
           S+ +
Sbjct: 628 STQH 639



 Score = 35.8 bits (81), Expect = 0.12
 Identities = 16/63 (25%), Positives = 33/63 (51%)
 Frame = +1

Query: 53  EAINFVNKIKARFEGDDHVYKSFLDILNMYRKENKCINEVYHEVAVLFQGHADLLDEFTH 112
           +A++++ ++K  F      Y  FL ++  ++ +    + V   V  LF+GH +L+  F  
Sbjct: 169 DALSYLKEVKNTFPDQKEKYDMFLQVMKDFKAQKTDTHGVIAAVKELFKGHNNLIYGFNA 348

Query: 113 FLP 115
           +LP
Sbjct: 349 YLP 357


>BE205344 similar to PIR|T00649|T0 hypothetical protein F3I6.12 - Arabidopsis
           thaliana, partial (8%)
          Length = 559

 Score =  109 bits (273), Expect = 6e-24
 Identities = 52/70 (74%), Positives = 59/70 (84%)
 Frame = +2

Query: 1   IDTAGVIARVKELFEGHRDLILGFNTFLPKGYEITLPLEDEQPPAKKPVEFEEAINFVNK 60
           +DT GVI RVKELF GHRDLILGFNTFLPKG+EITL  EDEQP  KK VEF+EA+++VN 
Sbjct: 350 VDTDGVIERVKELFRGHRDLILGFNTFLPKGHEITLSSEDEQPQPKKKVEFDEAMSYVNT 529

Query: 61  IKARFEGDDH 70
           IK RF+GD H
Sbjct: 530 IKTRFQGDVH 559



 Score = 41.2 bits (95), Expect = 0.003
 Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
 Frame = +2

Query: 42  QPPAK--KPVEFEEAINFVNKIKARFEGDDHVYKSFLDILNMYRKENKCINEVYHEVAVL 99
           QPP +  + +   +A+ ++  +K  F+     Y+ FL+++  ++ +    + V   V  L
Sbjct: 209 QPPNRGSQKLTTNDALAYLKAVKDIFQDKKEKYEDFLEVMKDFKAQRVDTDGVIERVKEL 388

Query: 100 FQGHADLLDEFTHFLP 115
           F+GH DL+  F  FLP
Sbjct: 389 FRGHRDLILGFNTFLP 436


>CA922071 similar to GP|8247350|emb| pSbaNS5 protein {Sorghum bicolor}, partial
            (14%)
          Length = 808

 Score =  102 bits (253), Expect = 1e-21
 Identities = 57/97 (58%), Positives = 62/97 (63%)
 Frame = -1

Query: 1292 PDKKEKSRLFLKRNKHRYAGSSEFSSQAMEGLQVFNGLECKIACSSSKVSYVLDTEDVLY 1351
            P  +E      K NK + A S E SSQ M+G+QV NGLECKIAC SSKVSYVLDTED L 
Sbjct: 778  PTVRESQEFS*KGNKLKCARSDELSSQVMDGIQVINGLECKIACGSSKVSYVLDTEDSLI 599

Query: 1352 RKKSKRRILHPTSSCNEPAKSSNIRSSRALRFCKLFS 1388
            R K KR  LH  +S   P  SSN  SSR  RF KLFS
Sbjct: 598  RTKRKRGSLHQNNSYCGPTMSSNTCSSRVQRFYKLFS 488



 Score = 38.1 bits (87), Expect = 0.024
 Identities = 17/22 (77%), Positives = 18/22 (81%)
 Frame = -3

Query: 1283 LHNDFLSVVPDKKEKSRLFLKR 1304
            LHNDFLSV PD K KS +FLKR
Sbjct: 806  LHNDFLSVSPDSKRKSGIFLKR 741


>TC93631 similar to EGAD|119721|127958 hypothetical protein F54D1.6
           {Caenorhabditis elegans}, partial (1%)
          Length = 1081

 Score = 95.1 bits (235), Expect = 2e-19
 Identities = 44/84 (52%), Positives = 60/84 (71%)
 Frame = +1

Query: 260 KTKYPEEFAFCDKVKEKLRNPDGYQEFLKCLHIYSKEIITQQELQSLVGDLLGKYPDLME 319
           K  + EE  F +KVKEK  NP+ YQ+FLKCLHIY++E+IT+ ELQ LV DL GKY DLM 
Sbjct: 676 KIMFREEHVFLEKVKEKFSNPEIYQDFLKCLHIYARELITRGELQLLVYDLFGKYTDLMV 855

Query: 320 EFNEFLVQAEKNDGGFLAGVMNKK 343
           EFN+F+ Q+EK +   +  +  ++
Sbjct: 856 EFNDFMAQSEKKNAKLVKALKGRQ 927



 Score = 34.7 bits (78), Expect = 0.26
 Identities = 18/36 (50%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
 Frame = +3

Query: 284 QEFLKCLHIYSK-EIITQQELQSLVGDLLGKYPDLM 318
           + F K LH Y    I  ++ELQ +VGDLLGK+ DL+
Sbjct: 501 KNFEKSLHSYRMGTIYKEKELQKMVGDLLGKHSDLV 608



 Score = 30.8 bits (68), Expect = 3.8
 Identities = 26/90 (28%), Positives = 42/90 (45%), Gaps = 3/90 (3%)
 Frame = +1

Query: 256 KKSLKTKYPEEFAFC-DKVKEKLRNPDGYQEFLKCLHIYSK--EIITQQELQSLVGDLLG 312
           KK +   Y E   F  ++   ++RN  G  + L+  +I ++  +   ++  +        
Sbjct: 412 KKGVSYSYVE*SVFLPEQSHREVRNTRGLPKILRSPYIATEWEQFTRRKNYKKW*AICWE 591

Query: 313 KYPDLMEEFNEFLVQAEKNDGGFLAGVMNK 342
             P L E FNEFL Q E N+G F   V+NK
Sbjct: 592 NTPILWEGFNEFLTQCESNEGLF-GHVLNK 678


>BF648188 similar to GP|21903805|gb| hypothetical protein {Streptococcus
           pyogenes MGAS315}, partial (17%)
          Length = 627

 Score = 79.3 bits (194), Expect = 9e-15
 Identities = 45/112 (40%), Positives = 61/112 (54%)
 Frame = +3

Query: 1   IDTAGVIARVKELFEGHRDLILGFNTFLPKGYEITLPLEDEQPPAKKPVEFEEAINFVNK 60
           ID  GV ARV ELF+GH+ LILG N  +PK YEI LP  DE+      V  ++A  F+ +
Sbjct: 309 IDPGGVKARVHELFKGHKHLILGINNIMPKNYEIILPPSDEK------VNRQDATTFLKQ 470

Query: 61  IKARFEGDDHVYKSFLDILNMYRKENKCINEVYHEVAVLFQGHADLLDEFTH 112
           +K  F+     Y  FL +++ Y      I +V      LF+GH DLL  F +
Sbjct: 471 VKVVFQDKMEKYYEFLQVIHDYMNLTIDILDVIEIGMKLFKGHVDLLSGFNY 626


>TC88447 similar to GP|21593015|gb|AAM64964.1 unknown {Arabidopsis
           thaliana}, partial (47%)
          Length = 1079

 Score = 45.1 bits (105), Expect = 2e-04
 Identities = 38/100 (38%), Positives = 48/100 (48%), Gaps = 19/100 (19%)
 Frame = +2

Query: 151 RERTTVSHCDRDPSVDRP---DPDHDRGLLRAEKEQRRRVEKEKDHREDGKRDWERD--- 204
           R+R   SH  RD   DR    D D DR  LR EK+  R    E++ RE  +RD +RD   
Sbjct: 287 RDRRRDSHRHRDRDYDREYDRDYDRDRYRLREEKDYGR----EREGRERERRDRDRDRGR 454

Query: 205 ----------GRDH-EHDGGQYRERLSHKRKSDRK--AED 231
                      RD  +HDGG YR+R +    S R+  AED
Sbjct: 455 RRSYSRSRSRSRDRKDHDGGDYRKRHARSSVSPRRDGAED 574



 Score = 34.7 bits (78), Expect = 0.26
 Identities = 19/73 (26%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
 Frame = +2

Query: 160 DRDPSVDRPDPDHDRGLLRAEKEQRRRVEKEKDHREDGKRDWERD-GRDHEHDGGQYRER 218
           D +   + P+ D++RG   A +  R R      HR+   RD++R+  RD++ D  + RE 
Sbjct: 215 DNEQPAEEPEKDYNRGRSPARERDRDRRRDSHRHRD---RDYDREYDRDYDRDRYRLREE 385

Query: 219 LSHKRKSDRKAED 231
             + R+ + +  +
Sbjct: 386 KDYGREREGRERE 424



 Score = 33.1 bits (74), Expect = 0.77
 Identities = 16/28 (57%), Positives = 20/28 (71%)
 Frame = +2

Query: 359 DRDRDRDRDRYRDDGMKERDRECRERDR 386
           DRD DRDR R R++    R+RE RER+R
Sbjct: 344 DRDYDRDRYRLREEKDYGREREGRERER 427



 Score = 32.7 bits (73), Expect = 1.0
 Identities = 44/145 (30%), Positives = 66/145 (45%), Gaps = 4/145 (2%)
 Frame = +2

Query: 254 DDKKSLKTKYPE-EFAFC--DKVKEKLRNPDGYQEFLKCLHIYSKEIITQQELQSLVGDL 310
           +D + L+ K P+ +FA    D+V ++L   D       C  I    I  +  L+SL G L
Sbjct: 2   NDYRKLRRKLPDGQFALTHVDEVIDELLTTD-----YSC-DIAMPRIKKRWTLESL-GAL 160

Query: 311 LGKYPDLMEEFNEFLVQAEKNDGGFLAGVMNKKSLWIEGPGLKPMKAEDRDRDRDRDRYR 370
             +   L E+F E     E+N+         +K       G  P +  DRDR RD  R+R
Sbjct: 161 EPRQSALEEDFEE----EEENEDNEQPAEEPEKDY---NRGRSPARERDRDRRRDSHRHR 319

Query: 371 D-DGMKERDRECRERDRSTVVSNKE 394
           D D  +E DR+  +RDR  +   K+
Sbjct: 320 DRDYDREYDRD-YDRDRYRLREEKD 391


>TC81158 similar to GP|9280664|gb|AAF86533.1| F21B7.15 {Arabidopsis thaliana},
            partial (6%)
          Length = 890

 Score = 41.2 bits (95), Expect = 0.003
 Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
 Frame = +1

Query: 987  GEQVCCEAKGENDVDADDEGEESPHRSSDDSENASENVDVSGSESADGEECSREEHEDRE 1046
            G+    E  G  D D   EGE     S  +SE+++ +   SGS+S + +E   E+ E+ +
Sbjct: 370  GDPPSVEVNGNEDKDDGSEGESESESSESESESSTSSSSTSGSDSDEDDEDDAEDEEEGQ 549

Query: 1047 --HDNKAESEGEAEGMVD 1062
               D K  +   A+G +D
Sbjct: 550  ISDDEKMVTWSAADGDLD 603


>TC89483 similar to GP|18377662|gb|AAL66981.1 unknown protein {Arabidopsis
           thaliana}, partial (35%)
          Length = 1711

 Score = 40.0 bits (92), Expect = 0.006
 Identities = 29/127 (22%), Positives = 63/127 (48%)
 Frame = +1

Query: 150 KRERTTVSHCDRDPSVDRPDPDHDRGLLRAEKEQRRRVEKEKDHREDGKRDWERDGRDHE 209
           +R+R      +++  ++R + + +R  +R E+EQ+RR+E+ +   E   ++WE   R+ E
Sbjct: 142 ERDRERELKREKERVLERYEREAERDRIRKEREQKRRIEEVERQFELQLKEWEYREREKE 321

Query: 210 HDGGQYRERLSHKRKSDRKAEDFGAEPLLDADEFFGTRPMSSTCDDKKSLKTKYPEEFAF 269
            +    +E+   + +  RK   +  E   D D     R   +  ++K++ + +  E+   
Sbjct: 322 KERQYEKEKEKDRERKRRKEILYDEE---DDDGDSRKRWRXNAIEEKRNKRLREKED-DL 489

Query: 270 CDKVKEK 276
            DK KE+
Sbjct: 490 ADKQKEE 510


>TC77638 similar to GP|20161455|dbj|BAB90379. ankyrin-like protein {Oryza
            sativa (japonica cultivar-group)}, partial (62%)
          Length = 2345

 Score = 39.7 bits (91), Expect = 0.008
 Identities = 25/82 (30%), Positives = 47/82 (56%), Gaps = 6/82 (7%)
 Frame = +1

Query: 979  SQKYQSRHGEQVCCEAKGENDVDADDEGEE-SPHRSSDDS--ENASENVDVSGSESA--- 1032
            +++++   G+      KG+++V ++++ EE S  +SS+D+  E+  +  +  GS +    
Sbjct: 526  ARQFEDNPGDLPEDATKGDSNVSSEEKSEENSTEKSSEDTKTEDEGKKTEDEGSNTENNK 705

Query: 1033 DGEECSREEHEDREHDNKAESE 1054
            DGEE S +E E  E + K ESE
Sbjct: 706  DGEEASTKESESDESEKKDESE 771



 Score = 30.0 bits (66), Expect = 6.5
 Identities = 33/140 (23%), Positives = 64/140 (45%), Gaps = 1/140 (0%)
 Frame = +1

Query: 693 SRAQGAEDTEDVVKAKNTEDV-VNTENNSVKSGIVSVAESGDSKAWQLNGDSGVREDRCL 751
           S  + +EDT+   + K TED   NTENN  K G  +  +  +S   +   +S   E+   
Sbjct: 619 STEKSSEDTKTEDEGKKTEDEGSNTENN--KDGEEASTKESESDESEKKDES--EENNKS 786

Query: 752 DSDHTVYKTETAGNNTQHGKTNIIGFTPDELSGVNKQNQSSERLVNANVSPASGMEQSNG 811
           DSD +  K+  +   T       +  + ++ S  N   ++++   NA    ++ +  S  
Sbjct: 787 DSDESEKKSSDSNETTDSNVEEKVEQSQNKESDENASEKNTDD--NAKDQSSNEVFPSGA 960

Query: 812 RTKIDNTSGHTATPSGNGNT 831
           ++++ N    T T +G+ +T
Sbjct: 961 QSELLN---ETTTQTGSFST 1011


>TC77946 homologue to GP|10334491|emb|CAC10207. putative splicing factor
           {Cicer arietinum}, complete
          Length = 2061

 Score = 39.7 bits (91), Expect = 0.008
 Identities = 22/82 (26%), Positives = 47/82 (56%), Gaps = 1/82 (1%)
 Frame = +3

Query: 151 RERTTVSHCDRDPSVDRPDPDHDRGLLRAEKEQRRRVEKEKD-HREDGKRDWERDGRDHE 209
           RER++  H +RD      + + ++ + R  +++ R  E+EK+  R D +R+ ER+ RD E
Sbjct: 348 RERSSGRHRERDGERGSREKEREKDVERGGRDKERDREREKERERRDKEREKERERRDKE 527

Query: 210 HDGGQYRERLSHKRKSDRKAED 231
            +    +ER   +++ +R+ ++
Sbjct: 528 RE----KERA*ERKRGERETKE 581



 Score = 31.2 bits (69), Expect = 2.9
 Identities = 12/28 (42%), Positives = 21/28 (74%)
 Frame = +3

Query: 359 DRDRDRDRDRYRDDGMKERDRECRERDR 386
           D++RDR+R++ R+   KER++E   RD+
Sbjct: 441 DKERDREREKERERRDKEREKERERRDK 524



 Score = 30.8 bits (68), Expect = 3.8
 Identities = 24/83 (28%), Positives = 35/83 (41%), Gaps = 1/83 (1%)
 Frame = +3

Query: 149 VKRERTTVSHCDRDPSVDRPDPDHDRGLLRAEKEQRRRVEKEKDHRE-DGKRDWERDGRD 207
           +K ERT   H          D D D G  R  K  R   ++    ++ D  RD ERD   
Sbjct: 192 IKSERTYRKH--------GIDDDLDGGEDRRSKRSRGGDDENGSKKDRDRDRDRERDREH 347

Query: 208 HEHDGGQYRERLSHKRKSDRKAE 230
            E   G++RER   +   +++ E
Sbjct: 348 RERSSGRHRERDGERGSREKERE 416



 Score = 30.8 bits (68), Expect = 3.8
 Identities = 12/31 (38%), Positives = 22/31 (70%)
 Frame = +3

Query: 356 KAEDRDRDRDRDRYRDDGMKERDRECRERDR 386
           K  DR+R+++R+R   +  KER+R  +ER++
Sbjct: 444 KERDREREKERERRDKEREKERERRDKEREK 536



 Score = 29.6 bits (65), Expect = 8.5
 Identities = 14/42 (33%), Positives = 27/42 (63%)
 Frame = +3

Query: 353 KPMKAEDRDRDRDRDRYRDDGMKERDRECRERDRSTVVSNKE 394
           K ++   RD++RDR+R ++   ++++RE +ER+R      KE
Sbjct: 417 KDVERGGRDKERDREREKERERRDKERE-KERERRDKEREKE 539


>BE325350 weakly similar to GP|13702821|gb| putative snRNP protein {Oryza
           sativa}, partial (6%)
          Length = 473

 Score = 39.3 bits (90), Expect = 0.011
 Identities = 19/34 (55%), Positives = 21/34 (60%)
 Frame = +2

Query: 360 RDRDRDRDRYRDDGMKERDRECRERDRSTVVSNK 393
           R+RDRDRDR R+     RDRE R RDR     NK
Sbjct: 284 RERDRDRDRERERDRDNRDRERRHRDREREEENK 385



 Score = 33.9 bits (76), Expect = 0.45
 Identities = 23/78 (29%), Positives = 39/78 (49%)
 Frame = +2

Query: 154 TTVSHCDRDPSVDRPDPDHDRGLLRAEKEQRRRVEKEKDHREDGKRDWERDGRDHEHDGG 213
           +T ++ +R    DR D D DRG         R   +E+D   D +R+ +RD RD E    
Sbjct: 200 STNNNINRSSDSDRRDRDRDRG-------HDRDSYRERDRDRDRERERDRDNRDRER--- 349

Query: 214 QYRERLSHKRKSDRKAED 231
           ++R+R   +R+ + K  +
Sbjct: 350 RHRDR---EREEENKVRE 394



 Score = 32.0 bits (71), Expect = 1.7
 Identities = 22/64 (34%), Positives = 36/64 (55%), Gaps = 9/64 (14%)
 Frame = +2

Query: 357 AEDRDRDRDR----DRYRD-----DGMKERDRECRERDRSTVVSNKEVSGLKIKDKHFLK 407
           ++ RDRDRDR    D YR+     D  +ERDR+ R+R+R      +E    K++++  L+
Sbjct: 233 SDRRDRDRDRGHDRDSYRERDRDRDRERERDRDNRDRERRHRDREREEEN-KVRERARLE 409

Query: 408 PINE 411
            + E
Sbjct: 410 KLAE 421



 Score = 31.6 bits (70), Expect = 2.2
 Identities = 20/48 (41%), Positives = 28/48 (57%), Gaps = 9/48 (18%)
 Frame = +2

Query: 356 KAEDRDRDRDRDRYRDDGMKER---DRE------CRERDRSTVVSNKE 394
           +  DRDRDR+R+R RD+  +ER   DRE       RER R   ++ +E
Sbjct: 284 RERDRDRDRERERDRDNRDRERRHRDREREEENKVRERARLEKLAERE 427


>TC80893 similar to GP|4557063|gb|AAD22502.1| expressed protein {Arabidopsis
            thaliana}, partial (39%)
          Length = 883

 Score = 36.6 bits (83), Expect = 0.070
 Identities = 19/61 (31%), Positives = 27/61 (44%)
 Frame = +3

Query: 996  GENDVDADDEGEESPHRSSDDSENASENVDVSGSESADGEECSREEHEDREHDNKAESEG 1055
            GE +  + DEGEE      D   N +   D    +  DG+E   E+ ED E +   E + 
Sbjct: 378  GEEEDYSGDEGEEEGDPEDDPEANGAGGSDDGEDDDDDGDEEDEEDGEDEEDEEDEEEDD 557

Query: 1056 E 1056
            E
Sbjct: 558  E 560



 Score = 34.7 bits (78), Expect = 0.26
 Identities = 24/74 (32%), Positives = 35/74 (46%), Gaps = 1/74 (1%)
 Frame = +3

Query: 997  ENDV-DADDEGEESPHRSSDDSENASENVDVSGSESADGEECSREEHEDREHDNKAESEG 1055
            ++DV D DD+GEE  + S D+ E   +  D   +  A G     ++ ED + D   E E 
Sbjct: 348  DDDVQDEDDDGEEEDY-SGDEGEEEGDPEDDPEANGAGGS----DDGEDDDDDGDEEDEE 512

Query: 1056 EAEGMVDAHDVEGD 1069
            + E   D  D E D
Sbjct: 513  DGEDEEDEEDEEED 554


>TC77925 similar to GP|18700163|gb|AAL77693.1 AT4g02720/T10P11_1
           {Arabidopsis thaliana}, partial (47%)
          Length = 1538

 Score = 36.6 bits (83), Expect = 0.070
 Identities = 31/117 (26%), Positives = 48/117 (40%), Gaps = 3/117 (2%)
 Frame = +3

Query: 129 RNSVLRDRRSAMPTVRQAHVVKRERTT---VSHCDRDPSVDRPDPDHDRGLLRAEKEQRR 185
           R S  + R S   +  ++ V  R+R      S  D D + +  D    R   R +  +RR
Sbjct: 603 RKSYKKSRESDSESESESEVEDRKRRKSRKYSESDSDTNSEEEDRKRRR---RRKSSRRR 773

Query: 186 RVEKEKDHREDGKRDWERDGRDHEHDGGQYRERLSHKRKSDRKAEDFGAEPLLDADE 242
           R    K  R     + E D      D G+ R+R    RKS +K+    +EP+ +  E
Sbjct: 774 RKSSRKKRRCSDSDESETDDESGYDDSGRKRKRSKRSRKSKKKS----SEPVSEGSE 932


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.315    0.133    0.385 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,825,214
Number of Sequences: 36976
Number of extensions: 546488
Number of successful extensions: 2671
Number of sequences better than 10.0: 92
Number of HSP's better than 10.0 without gapping: 2425
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2578
length of query: 1389
length of database: 9,014,727
effective HSP length: 108
effective length of query: 1281
effective length of database: 5,021,319
effective search space: 6432309639
effective search space used: 6432309639
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 64 (29.3 bits)