Lotus
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0026.7
         (303 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC76421 homologue to PIR|T02995|T02995 unspecific monooxygenase ...   130  5e-46
TC76423 homologue to GP|13171103|gb|AAK13589.1 rRNA intron-encod...   130  5e-46
TC76485 homologue to GP|4097684|gb|AAD00154.1| ubiquitin conjuga...   128  1e-45
BE205210 GP|18844786|db contains ESTs C97279(C53695) C97278(C536...    97  5e-36
BQ139241 similar to GP|4097684|gb| ubiquitin conjugating enzyme ...   130  2e-32
TC76377 homologue to PIR|S12206|S12206 hypothetical protein 2 (r...   130  8e-31
CB891961 homologue to GP|2213425|emb| hypothetical protein {Citr...   130  8e-31
AW774151 similar to PIR|A86444|A864 probable RNA helicase [impor...   130  8e-31
BG644913 similar to PIR|D84651|D846 hypothetical protein At2g256...   130  8e-31
CB891337 PIR|T52341|T52 ADP-ribosylation factor [imported] - ric...   130  8e-31
TC76482 similar to PIR|T00517|T00517 probable metal ion transpor...    73  5e-29
TC76392 similar to GP|14030701|gb|AAK53025.1 At2g28370/T1B3.11 {...    72  2e-24
AW686718 similar to GP|6642656|gb|A unknown protein {Arabidopsis...    72  2e-24
BE204873 similar to GP|18767124|gb| unknown {Saccharomyces cerev...    91  4e-19
TC76464 similar to GP|14532540|gb|AAK63998.1 At1g19180/T29M8_5 {...    91  5e-19
TC76408 homologue to GP|13928452|dbj|BAB47119. 14-3-3 protein {V...    87  6e-18
BE203227 weakly similar to PIR|T04124|T041 receptor-like protein...    72  4e-17
TC76456 similar to GP|16930529|gb|AAL31950.1 CDH1-D {Gallus gall...    84  5e-17
CA860104 homologue to GP|4097684|gb|A ubiquitin conjugating enzy...    83  1e-16
BF637479 similar to GP|3063396|dbj| vcCyP {Vicia faba}, partial ...    81  4e-16

>TC76421 homologue to PIR|T02995|T02995 unspecific monooxygenase (EC
           1.14.14.1) - common tobacco, partial (44%)
          Length = 5080

 Score =  130 bits (326), Expect(2) = 5e-46
 Identities = 53/60 (88%), Positives = 56/60 (93%)
 Frame = -1

Query: 244 GKERIASKRDEPTGEHQRQTDRPNPRSNYELFNCNNLNIRYWSWNYRGCWHQTCSPMDPR 303
           G+ERIA +RDEPTG H R+TDRPNPRSNYELFNCNNLNIRYWSWNYRGCWHQTC PMDPR
Sbjct: 481 GQERIAGRRDEPTGAHHRRTDRPNPRSNYELFNCNNLNIRYWSWNYRGCWHQTCPPMDPR 302



 Score =  104 bits (259), Expect = 5e-23
 Identities = 49/57 (85%), Positives = 51/57 (88%)
 Frame = -3

Query: 115  DNDSSAGSPTETLLRLLLPLNDKVQWTSHNVASSEPPTLPQSEHFTGPFNRLRSRSL 171
            DND SAGSPTETLLRLLLPLNDKVQWTSHNVA SEPPT PQSEHFTGPFNR   R++
Sbjct: 1574 DNDPSAGSPTETLLRLLLPLNDKVQWTSHNVAGSEPPTSPQSEHFTGPFNR*ERRAV 1404



 Score = 91.3 bits (225), Expect = 4e-19
 Identities = 44/66 (66%), Positives = 49/66 (73%)
 Frame = -3

Query: 13   VSKHAETARAAIHNHGSGHNGALTLSGAPFQGTWARSATEDASLDYNSDALGDRFSWWAL 72
            + K  ++  A     GS HNGALTLSGAPFQGTWARSA EDAS DYNS+A GDRFSWWA 
Sbjct: 2474 IPKQPDSPTAPRGATGSEHNGALTLSGAPFQGTWARSAAEDASPDYNSNAEGDRFSWWAY 2295

Query: 73   PGRRAL 78
            PG  A+
Sbjct: 2294 PGSLAV 2277



 Score = 88.6 bits (218), Expect = 3e-18
 Identities = 45/68 (66%), Positives = 51/68 (74%)
 Frame = -2

Query: 163  FNRLRSRSLTELTTQIAPPNKNGHAPPHIESRKSSQSVNPYYVWTCCSSFINPRISPLTM 222
            F+RLRSRSLTELT QIAPP KNGHAPP IESRKSSQSVNPYYVWT   S    ++S    
Sbjct: 1113 FSRLRSRSLTELTRQIAPPTKNGHAPPPIESRKSSQSVNPYYVWTW*VSPC*VKLSRRLH 934

Query: 223  KYECPQLS 230
             + CP ++
Sbjct: 933  SWWCPSVN 910



 Score = 72.0 bits (175), Expect(2) = 5e-46
 Identities = 33/38 (86%), Positives = 35/38 (91%)
 Frame = -2

Query: 209 CSSFINPRISPLTMKYECPQLSLSIITPMPKAKTIGKE 246
           CSSFINPRISPLTMKYECP+LSL IITP+PKA TIG E
Sbjct: 699 CSSFINPRISPLTMKYECPRLSLLIITPIPKANTIGSE 586



 Score = 59.7 bits (143), Expect(2) = 6e-12
 Identities = 28/31 (90%), Positives = 31/31 (99%)
 Frame = -3

Query: 84   GATCVQRLNGSRDSAIHTKYRISLRSSSMRD 114
            GATCVQRL+GSRDSAIHTKYRISLRSSSM++
Sbjct: 1931 GATCVQRLDGSRDSAIHTKYRISLRSSSMQE 1839



 Score = 44.7 bits (104), Expect = 4e-05
 Identities = 21/40 (52%), Positives = 27/40 (67%)
 Frame = -2

Query: 1    MGSPQADARSTQVSKHAETARAAIHNHGSGHNGALTLSGA 40
            MGSPQADARS  V KHAE+ARA  HN     + +++ + A
Sbjct: 2835 MGSPQADARSAHVPKHAESARAVAHNRDDDVSASISTTQA 2716



 Score = 27.7 bits (60), Expect(2) = 6e-12
 Identities = 12/12 (100%), Positives = 12/12 (100%)
 Frame = -2

Query: 73   PGRRALNLMASG 84
            PGRRALNLMASG
Sbjct: 1965 PGRRALNLMASG 1930


>TC76423 homologue to GP|13171103|gb|AAK13589.1 rRNA intron-encoded homing
           endonuclease {Oryza sativa}, partial (43%)
          Length = 1334

 Score =  130 bits (326), Expect(2) = 5e-46
 Identities = 53/60 (88%), Positives = 56/60 (93%)
 Frame = -1

Query: 244 GKERIASKRDEPTGEHQRQTDRPNPRSNYELFNCNNLNIRYWSWNYRGCWHQTCSPMDPR 303
           G+ERIA +RDEPTG H R+TDRPNPRSNYELFNCNNLNIRYWSWNYRGCWHQTC PMDPR
Sbjct: 710 GQERIAGRRDEPTGAHHRRTDRPNPRSNYELFNCNNLNIRYWSWNYRGCWHQTCPPMDPR 531



 Score = 72.0 bits (175), Expect(2) = 5e-46
 Identities = 33/38 (86%), Positives = 35/38 (91%)
 Frame = -2

Query: 209 CSSFINPRISPLTMKYECPQLSLSIITPMPKAKTIGKE 246
           CSSFINPRISPLTMKYECP+LSL IITP+PKA TIG E
Sbjct: 928 CSSFINPRISPLTMKYECPRLSLLIITPIPKANTIGSE 815


>TC76485 homologue to GP|4097684|gb|AAD00154.1| ubiquitin conjugating enzyme
           {Metarhizium anisopliae}, partial (17%)
          Length = 1084

 Score =  128 bits (322), Expect(2) = 1e-45
 Identities = 52/60 (86%), Positives = 56/60 (92%)
 Frame = -1

Query: 244 GKERIASKRDEPTGEHQRQTDRPNPRSNYELFNCNNLNIRYWSWNYRGCWHQTCSPMDPR 303
           G+ERIA +RDEPTG H R+TDRPNPRSNYELFNCNNLNIRYWSWNYRGCWHQTC P+DPR
Sbjct: 646 GQERIAGRRDEPTGAHHRRTDRPNPRSNYELFNCNNLNIRYWSWNYRGCWHQTCPPIDPR 467



 Score = 72.0 bits (175), Expect(2) = 1e-45
 Identities = 33/38 (86%), Positives = 35/38 (91%)
 Frame = -2

Query: 209 CSSFINPRISPLTMKYECPQLSLSIITPMPKAKTIGKE 246
           CSSFINPRISPLTMKYECP+LSL IITP+PKA TIG E
Sbjct: 864 CSSFINPRISPLTMKYECPRLSLLIITPIPKANTIGSE 751


>BE205210 GP|18844786|db contains ESTs C97279(C53695) C97278(C53695)~unknown
           protein {Oryza sativa (japonica cultivar-group)},
           partial (7%)
          Length = 540

 Score = 96.7 bits (239), Expect(2) = 5e-36
 Identities = 40/46 (86%), Positives = 43/46 (92%)
 Frame = -1

Query: 244 GKERIASKRDEPTGEHQRQTDRPNPRSNYELFNCNNLNIRYWSWNY 289
           G+ERIA +RDEPTG H R+TDRPNPRSNYELFNCNNLNIRYWSWNY
Sbjct: 138 GQERIAGRRDEPTGAHHRRTDRPNPRSNYELFNCNNLNIRYWSWNY 1



 Score = 72.0 bits (175), Expect(2) = 5e-36
 Identities = 33/38 (86%), Positives = 35/38 (91%)
 Frame = -2

Query: 209 CSSFINPRISPLTMKYECPQLSLSIITPMPKAKTIGKE 246
           CSSFINPRISPLTMKYECP+LSL IITP+PKA TIG E
Sbjct: 356 CSSFINPRISPLTMKYECPRLSLLIITPIPKANTIGSE 243


>BQ139241 similar to GP|4097684|gb| ubiquitin conjugating enzyme {Metarhizium
           anisopliae}, partial (82%)
          Length = 664

 Score =  130 bits (326), Expect(2) = 2e-32
 Identities = 53/60 (88%), Positives = 56/60 (93%)
 Frame = -3

Query: 244 GKERIASKRDEPTGEHQRQTDRPNPRSNYELFNCNNLNIRYWSWNYRGCWHQTCSPMDPR 303
           G+ERIA +RDEPTG H R+TDRPNPRSNYELFNCNNLNIRYWSWNYRGCWHQTC PMDPR
Sbjct: 194 GQERIAGRRDEPTGAHHRRTDRPNPRSNYELFNCNNLNIRYWSWNYRGCWHQTCPPMDPR 15



 Score = 26.6 bits (57), Expect(2) = 2e-32
 Identities = 11/14 (78%), Positives = 12/14 (85%)
 Frame = -1

Query: 233 IITPMPKAKTIGKE 246
           IITP+PKA TIG E
Sbjct: 340 IITPIPKANTIGSE 299


>TC76377 homologue to PIR|S12206|S12206 hypothetical protein 2 (rRNA external
            transcribed spacer) - mouse, partial (21%)
          Length = 1409

 Score =  130 bits (326), Expect = 8e-31
 Identities = 53/60 (88%), Positives = 56/60 (93%)
 Frame = -2

Query: 244  GKERIASKRDEPTGEHQRQTDRPNPRSNYELFNCNNLNIRYWSWNYRGCWHQTCSPMDPR 303
            G+ERIA +RDEPTG H R+TDRPNPRSNYELFNCNNLNIRYWSWNYRGCWHQTC PMDPR
Sbjct: 1255 GQERIAGRRDEPTGAHHRRTDRPNPRSNYELFNCNNLNIRYWSWNYRGCWHQTCPPMDPR 1076


>CB891961 homologue to GP|2213425|emb| hypothetical protein {Citrus x
           paradisi}, partial (11%)
          Length = 417

 Score =  130 bits (326), Expect = 8e-31
 Identities = 53/60 (88%), Positives = 56/60 (93%)
 Frame = -2

Query: 244 GKERIASKRDEPTGEHQRQTDRPNPRSNYELFNCNNLNIRYWSWNYRGCWHQTCSPMDPR 303
           G+ERIA +RDEPTG H R+TDRPNPRSNYELFNCNNLNIRYWSWNYRGCWHQTC PMDPR
Sbjct: 206 GQERIAGRRDEPTGAHHRRTDRPNPRSNYELFNCNNLNIRYWSWNYRGCWHQTCPPMDPR 27


>AW774151 similar to PIR|A86444|A864 probable RNA helicase [imported] -
           Arabidopsis thaliana, partial (15%)
          Length = 540

 Score =  130 bits (326), Expect = 8e-31
 Identities = 53/60 (88%), Positives = 56/60 (93%)
 Frame = -3

Query: 244 GKERIASKRDEPTGEHQRQTDRPNPRSNYELFNCNNLNIRYWSWNYRGCWHQTCSPMDPR 303
           G+ERIA +RDEPTG H R+TDRPNPRSNYELFNCNNLNIRYWSWNYRGCWHQTC PMDPR
Sbjct: 229 GQERIAGRRDEPTGAHHRRTDRPNPRSNYELFNCNNLNIRYWSWNYRGCWHQTCPPMDPR 50


>BG644913 similar to PIR|D84651|D846 hypothetical protein At2g25680
           [imported] - Arabidopsis thaliana, partial (16%)
          Length = 817

 Score =  130 bits (326), Expect = 8e-31
 Identities = 53/60 (88%), Positives = 56/60 (93%)
 Frame = -1

Query: 244 GKERIASKRDEPTGEHQRQTDRPNPRSNYELFNCNNLNIRYWSWNYRGCWHQTCSPMDPR 303
           G+ERIA +RDEPTG H R+TDRPNPRSNYELFNCNNLNIRYWSWNYRGCWHQTC PMDPR
Sbjct: 250 GQERIAGRRDEPTGAHHRRTDRPNPRSNYELFNCNNLNIRYWSWNYRGCWHQTCPPMDPR 71


>CB891337 PIR|T52341|T52 ADP-ribosylation factor [imported] - rice, partial
           (14%)
          Length = 616

 Score =  130 bits (326), Expect = 8e-31
 Identities = 53/60 (88%), Positives = 56/60 (93%)
 Frame = +3

Query: 244 GKERIASKRDEPTGEHQRQTDRPNPRSNYELFNCNNLNIRYWSWNYRGCWHQTCSPMDPR 303
           G+ERIA +RDEPTG H R+TDRPNPRSNYELFNCNNLNIRYWSWNYRGCWHQTC PMDPR
Sbjct: 249 GQERIAGRRDEPTGAHHRRTDRPNPRSNYELFNCNNLNIRYWSWNYRGCWHQTCPPMDPR 428


>TC76482 similar to PIR|T00517|T00517 probable metal ion transporter (NRAMP)
           [imported] - Arabidopsis thaliana, partial (8%)
          Length = 599

 Score = 73.2 bits (178), Expect(2) = 5e-29
 Identities = 31/37 (83%), Positives = 34/37 (91%)
 Frame = -2

Query: 244 GKERIASKRDEPTGEHQRQTDRPNPRSNYELFNCNNL 280
           G+ERIA +RDEPTG H R+TDRPNPRSNYELFNCNNL
Sbjct: 112 GQERIAGRRDEPTGAHHRRTDRPNPRSNYELFNCNNL 2



 Score = 72.0 bits (175), Expect(2) = 5e-29
 Identities = 33/38 (86%), Positives = 35/38 (91%)
 Frame = -3

Query: 209 CSSFINPRISPLTMKYECPQLSLSIITPMPKAKTIGKE 246
           CSSFINPRISPLTMKYECP+LSL IITP+PKA TIG E
Sbjct: 330 CSSFINPRISPLTMKYECPRLSLLIITPIPKANTIGSE 217


>TC76392 similar to GP|14030701|gb|AAK53025.1 At2g28370/T1B3.11 {Arabidopsis
           thaliana}, partial (55%)
          Length = 918

 Score = 72.0 bits (175), Expect(2) = 2e-24
 Identities = 33/38 (86%), Positives = 35/38 (91%)
 Frame = -2

Query: 209 CSSFINPRISPLTMKYECPQLSLSIITPMPKAKTIGKE 246
           CSSFINPRISPLTMKYECP+LSL IITP+PKA TIG E
Sbjct: 308 CSSFINPRISPLTMKYECPRLSLLIITPIPKANTIGSE 195



 Score = 57.4 bits (137), Expect(2) = 2e-24
 Identities = 24/30 (80%), Positives = 27/30 (90%)
 Frame = -1

Query: 244 GKERIASKRDEPTGEHQRQTDRPNPRSNYE 273
           G+ERIA +RDEPTG H R+TDRPNPRSNYE
Sbjct: 90  GQERIAGRRDEPTGAHHRRTDRPNPRSNYE 1


>AW686718 similar to GP|6642656|gb|A unknown protein {Arabidopsis thaliana},
           partial (19%)
          Length = 566

 Score = 72.0 bits (175), Expect(2) = 2e-24
 Identities = 33/38 (86%), Positives = 35/38 (91%)
 Frame = -2

Query: 209 CSSFINPRISPLTMKYECPQLSLSIITPMPKAKTIGKE 246
           CSSFINPRISPLTMKYECP+LSL IITP+PKA TIG E
Sbjct: 310 CSSFINPRISPLTMKYECPRLSLLIITPIPKANTIGSE 197



 Score = 57.4 bits (137), Expect(2) = 2e-24
 Identities = 24/30 (80%), Positives = 27/30 (90%)
 Frame = -1

Query: 244 GKERIASKRDEPTGEHQRQTDRPNPRSNYE 273
           G+ERIA +RDEPTG H R+TDRPNPRSNYE
Sbjct: 92  GQERIAGRRDEPTGAHHRRTDRPNPRSNYE 3


>BE204873 similar to GP|18767124|gb| unknown {Saccharomyces cerevisiae},
           partial (30%)
          Length = 574

 Score = 91.3 bits (225), Expect = 4e-19
 Identities = 44/66 (66%), Positives = 49/66 (73%)
 Frame = -2

Query: 13  VSKHAETARAAIHNHGSGHNGALTLSGAPFQGTWARSATEDASLDYNSDALGDRFSWWAL 72
           + K  ++  A     GS HNGALTLSGAPFQGTWARSA EDAS DYNS+A GDRFSWWA 
Sbjct: 249 IPKQPDSPTAPRGATGSEHNGALTLSGAPFQGTWARSAAEDASPDYNSNAEGDRFSWWAY 70

Query: 73  PGRRAL 78
           PG  A+
Sbjct: 69  PGSLAV 52


>TC76464 similar to GP|14532540|gb|AAK63998.1 At1g19180/T29M8_5 {Arabidopsis
           thaliana}, partial (18%)
          Length = 809

 Score = 90.9 bits (224), Expect = 5e-19
 Identities = 42/46 (91%), Positives = 43/46 (93%)
 Frame = -2

Query: 163 FNRLRSRSLTELTTQIAPPNKNGHAPPHIESRKSSQSVNPYYVWTC 208
           F+RLRSRSLTELT QIAPP KNGHAPP IESRKSSQSVNPYYVWTC
Sbjct: 139 FSRLRSRSLTELTRQIAPPTKNGHAPPPIESRKSSQSVNPYYVWTC 2


>TC76408 homologue to GP|13928452|dbj|BAB47119. 14-3-3 protein {Vigna
           angularis}, partial (11%)
          Length = 859

 Score = 87.4 bits (215), Expect = 6e-18
 Identities = 34/38 (89%), Positives = 34/38 (89%)
 Frame = -1

Query: 266 PNPRSNYELFNCNNLNIRYWSWNYRGCWHQTCSPMDPR 303
           P   SNYELFNCNNLNIRYWSWNYRGCWHQTC PMDPR
Sbjct: 637 PTQGSNYELFNCNNLNIRYWSWNYRGCWHQTCPPMDPR 524



 Score = 49.7 bits (117), Expect = 1e-06
 Identities = 21/32 (65%), Positives = 24/32 (74%)
 Frame = -3

Query: 244 GKERIASKRDEPTGEHQRQTDRPNPRSNYELF 275
           G+ERIA +RDEPTG H R+TDRPNPR     F
Sbjct: 704 GQERIAGRRDEPTGAHHRRTDRPNPRVQLRAF 609


>BE203227 weakly similar to PIR|T04124|T041 receptor-like protein kinase (EC
           2.7.1.-) - rice, partial (5%)
          Length = 532

 Score = 72.0 bits (175), Expect(2) = 4e-17
 Identities = 33/38 (86%), Positives = 35/38 (91%)
 Frame = -3

Query: 209 CSSFINPRISPLTMKYECPQLSLSIITPMPKAKTIGKE 246
           CSSFINPRISPLTMKYECP+LSL IITP+PKA TIG E
Sbjct: 275 CSSFINPRISPLTMKYECPRLSLLIITPIPKANTIGSE 162



 Score = 33.1 bits (74), Expect(2) = 4e-17
 Identities = 13/19 (68%), Positives = 16/19 (83%)
 Frame = -2

Query: 244 GKERIASKRDEPTGEHQRQ 262
           G+ERIA +RDEPTG H R+
Sbjct: 57  GQERIAGRRDEPTGAHHRR 1


>TC76456 similar to GP|16930529|gb|AAL31950.1 CDH1-D {Gallus gallus},
           partial (26%)
          Length = 720

 Score = 84.3 bits (207), Expect = 5e-17
 Identities = 39/45 (86%), Positives = 41/45 (90%)
 Frame = +1

Query: 163 FNRLRSRSLTELTTQIAPPNKNGHAPPHIESRKSSQSVNPYYVWT 207
           F+RLRSRSL+ELT QI PP KNGHAPP IESRKSSQSVNPYYVWT
Sbjct: 544 FSRLRSRSLSELTRQITPPTKNGHAPPPIESRKSSQSVNPYYVWT 678



 Score = 46.6 bits (109), Expect(2) = 2e-06
 Identities = 24/37 (64%), Positives = 29/37 (77%)
 Frame = +1

Query: 109 SSSMRDDNDSSAGSPTETLLRLLLPLNDKVQWTSHNV 145
           +S ++  ND SAGSPTETLLRLLLPLND+V  TS  +
Sbjct: 67  NSRIKVFNDPSAGSPTETLLRLLLPLNDQV*PTSRRI 177



 Score = 21.9 bits (45), Expect(2) = 2e-06
 Identities = 10/19 (52%), Positives = 12/19 (62%)
 Frame = +2

Query: 147 SSEPPTLPQSEHFTGPFNR 165
           +S P   PQS+  T PFNR
Sbjct: 179 NSLPILKPQSKGLTKPFNR 235


>CA860104 homologue to GP|4097684|gb|A ubiquitin conjugating enzyme
           {Metarhizium anisopliae}, partial (17%)
          Length = 316

 Score = 83.2 bits (204), Expect = 1e-16
 Identities = 36/65 (55%), Positives = 41/65 (62%), Gaps = 3/65 (4%)
 Frame = -3

Query: 242 TIGKERIASKRDEPTGEHQRQTDRPN---PRSNYELFNCNNLNIRYWSWNYRGCWHQTCS 298
           T+ K   +S     +    RQ    N   P+ NYELFNCNN NIRYWSWNYRGCWHQTC 
Sbjct: 212 TLNKWHESSSEGRDSSHQYRQLSLTNG*TPKFNYELFNCNNFNIRYWSWNYRGCWHQTCP 33

Query: 299 PMDPR 303
           P+ PR
Sbjct: 32  PIVPR 18


>BF637479 similar to GP|3063396|dbj| vcCyP {Vicia faba}, partial (57%)
          Length = 656

 Score = 81.3 bits (199), Expect = 4e-16
 Identities = 39/43 (90%), Positives = 40/43 (92%)
 Frame = -1

Query: 163 FNRLRSRSLTELTTQIAPPNKNGHAPPHIESRKSSQSVNPYYV 205
           F+RLRSRSLTELT QIAPP KNGHAPP IESRKSSQSVNPYYV
Sbjct: 137 FSRLRSRSLTELTRQIAPPTKNGHAPPPIESRKSSQSVNPYYV 9


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.314    0.128    0.402 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,275,873
Number of Sequences: 36976
Number of extensions: 186514
Number of successful extensions: 1457
Number of sequences better than 10.0: 84
Number of HSP's better than 10.0 without gapping: 1429
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1457
length of query: 303
length of database: 9,014,727
effective HSP length: 96
effective length of query: 207
effective length of database: 5,465,031
effective search space: 1131261417
effective search space used: 1131261417
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)


Lotus: description of TM0026.7