TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0026.17
         (369 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

BE941280 weakly similar to GP|20197614|g unknown protein {Arabid...   145  3e-35
BI271341                                                               81  6e-16
TC91638 similar to GP|15983797|gb|AAL10495.1 AT5g39660/MIJ24_130...    28  7.3
BF006398 similar to GP|10177495|db gb|AAC61821.1~gene_id:K21C13....    27  9.6
BF642066 homologue to GP|22450121|em glyceraldehyde-3-phosphate ...    27  9.6

>BE941280 weakly similar to GP|20197614|g unknown protein {Arabidopsis
           thaliana}, partial (8%)
          Length = 403

 Score =  145 bits (365), Expect = 3e-35
 Identities = 74/118 (62%), Positives = 92/118 (77%)
 Frame = -1

Query: 29  SAAIRSMGMIVLNVASSGIASLLLPGGRTAHSRFCIPLQTDKTATCNIKQDSLRENLLIC 88
           SAA+RS G IVL  ASSGI +LL+PGGRTAHSRF IP   D+T+ C +  +    +L+I 
Sbjct: 355 SAALRSEGEIVLACASSGIDALLMPGGRTAHSRFGIPFIIDETSMCGVTPNIPLASLVIK 176

Query: 89  AKFIIWDEAPMLNKNCFEALNRTLCDIMRQEDESNMDKPFGGKVVVLGGDFRQILPVI 146
           AK IIWDEAPM++K+CFEAL+R+L D+++  DE N D PFGGKVVVLGGDFRQIL V+
Sbjct: 175 AKLIIWDEAPMMHKHCFEALDRSLRDVLKTVDERNKDIPFGGKVVVLGGDFRQILLVM 2


>BI271341 
          Length = 468

 Score = 81.3 bits (199), Expect = 6e-16
 Identities = 42/97 (43%), Positives = 62/97 (63%)
 Frame = +1

Query: 139 FRQILPVIPKGGRQDIVSATVNSSDLWKYCKVLKLTKNMRLCTTGSPELATEIKEFAD*I 198
           FR ILPVIP+G R DI+ AT+NSS +  +C+V++L KNM L   G      E ++F+ *I
Sbjct: 1   FR*ILPVIPRGSRSDIIHATINSSCI*DHCQVVRLKKNMWLQQNGQSSNDPEFEQFSK*I 180

Query: 199 LKIGDGDFESNERGESDIEIPKDLLIHDSENPLLDLI 235
           LK+GDG         +DI+IP +LLI + ++ L  ++
Sbjct: 181 LKVGDGKIYEPNDSYADIDIPPELLISNYDDSLQTIV 291


>TC91638 similar to GP|15983797|gb|AAL10495.1 AT5g39660/MIJ24_130
           {Arabidopsis thaliana}, partial (16%)
          Length = 914

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 18/48 (37%), Positives = 23/48 (47%)
 Frame = +2

Query: 181 TTGSPELATEIKEFAD*ILKIGDGDFESNERGESDIEIPKDLLIHDSE 228
           T  SP L    +E  D +LK  +GD +     E  +  PK L I DSE
Sbjct: 563 TPNSPTLGKHSRE--DNMLKSSEGDGKKEISEEKSLWFPKTLRIDDSE 700


>BF006398 similar to GP|10177495|db gb|AAC61821.1~gene_id:K21C13.22~strong
           similarity to unknown protein {Arabidopsis thaliana},
           partial (22%)
          Length = 434

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
 Frame = -3

Query: 52  LPGGRTAHSRFCIPLQTDKTATCNIKQDSLRENLLICAK-FIIWDEAPMLNKNCF 105
           LP  +T   R    LQ       NI   S R N ++  K F  WDE P+ +  CF
Sbjct: 336 LPANKTVDWR----LQIYAVDFTNITHTSYRCNYVVHIKVFCKWDECPISSNKCF 184


>BF642066 homologue to GP|22450121|em glyceraldehyde-3-phosphate
           dehydrogenase {Plutella xylostella}, partial (44%)
          Length = 447

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 10/24 (41%), Positives = 14/24 (57%)
 Frame = +1

Query: 238 HIPIWCRT*RLKSFWKDDAYCVLH 261
           H+  WC+ *RL+S  +    C LH
Sbjct: 292 HVRCWCQP*RLRSILQGHLQCFLH 363


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.342    0.152    0.494 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,222,599
Number of Sequences: 36976
Number of extensions: 158171
Number of successful extensions: 1136
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1133
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1136
length of query: 369
length of database: 9,014,727
effective HSP length: 98
effective length of query: 271
effective length of database: 5,391,079
effective search space: 1460982409
effective search space used: 1460982409
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 15 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (22.0 bits)
S2: 59 (27.3 bits)