TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0023.5
         (266 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

BG587145 similar to PIR|H86337|H8 protein F5M15.26 [imported] - ...    53  1e-07
BG587101 similar to GP|6691191|gb F7F22.15 {Arabidopsis thaliana...    40  7e-04
TC80522 weakly similar to PIR|H96548|H96548 unknown protein [imp...    29  2.1
TC93509 weakly similar to GP|3769330|dbj|BAA33879.1 alpha-amylas...    27  8.2

>BG587145 similar to PIR|H86337|H8 protein F5M15.26 [imported] - Arabidopsis
           thaliana, partial (13%)
          Length = 763

 Score = 53.1 bits (126), Expect = 1e-07
 Identities = 25/64 (39%), Positives = 42/64 (65%)
 Frame = +3

Query: 5   KPTPEVPLILYLAVTSTAVSAMLLQEEHKKYKMIYFVSHTLQGAEVRYQKIEKAALAILK 64
           KP     L LY+A++STAVS++L++E+  + K I++ S  +   E RY  +EK A A++ 
Sbjct: 570 KPEAGDTLSLYIAISSTAVSSVLIREDRGEQKPIFYTSKRMTDPETRYPTLEKMAFAVIT 749

Query: 65  TARR 68
           +AR+
Sbjct: 750 SARK 761


>BG587101 similar to GP|6691191|gb F7F22.15 {Arabidopsis thaliana}, partial
           (10%)
          Length = 624

 Score = 40.4 bits (93), Expect = 7e-04
 Identities = 19/40 (47%), Positives = 26/40 (64%)
 Frame = +2

Query: 112 FAIWGADILGLFSVAKAQMKFIVVAVDYFTKWIEAEAVET 151
           F +WG D +G F  +    K+I+VAVDY +KW+EA A  T
Sbjct: 311 FDVWGIDFMGPFP-SSYNNKYILVAVDYVSKWVEAIASPT 427


>TC80522 weakly similar to PIR|H96548|H96548 unknown protein [imported] -
           Arabidopsis thaliana, partial (12%)
          Length = 807

 Score = 28.9 bits (63), Expect = 2.1
 Identities = 15/34 (44%), Positives = 22/34 (64%)
 Frame = +2

Query: 186 EVENQSWRVITMNEEENNDNLIANLIMLPELQRE 219
           E++ QS  + TMN   NN+N  A  + LP+LQR+
Sbjct: 482 EIDQQSQTMQTMNNNNNNNNNEA--VDLPQLQRQ 577


>TC93509 weakly similar to GP|3769330|dbj|BAA33879.1 alpha-amylase
           {Phaseolus vulgaris}, partial (20%)
          Length = 474

 Score = 26.9 bits (58), Expect = 8.2
 Identities = 25/84 (29%), Positives = 37/84 (43%), Gaps = 3/84 (3%)
 Frame = -3

Query: 23  VSAMLLQEEHKKYKMIYFVSHTLQGAEVRYQKIE---KAALAILKTARRLRPYFQSFQIK 79
           ++A L++   ++Y++       L GA  R Q +E   K AL   + AR  +P        
Sbjct: 442 LNACLMERFQQRYQL-------LLGAIGRVQVVEAPGKVALGRHRLARWRQPNVGEPSFL 284

Query: 80  VKTDILLRQVWQKPDLSGAPPEQL 103
              D+LL  V     L  APPE L
Sbjct: 283 DSRDVLLHYVVPATRLMAAPPEPL 212


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.320    0.132    0.382 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,290,524
Number of Sequences: 36976
Number of extensions: 82858
Number of successful extensions: 350
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 348
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 350
length of query: 266
length of database: 9,014,727
effective HSP length: 94
effective length of query: 172
effective length of database: 5,538,983
effective search space: 952705076
effective search space used: 952705076
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)