BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0023.15
(528 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC79813 similar to GP|13877579|gb|AAK43867.1 putative T-complex ... 566 e-172
TC79552 similar to GP|13877579|gb|AAK43867.1 putative T-complex ... 387 e-108
TC91063 similar to GP|13877579|gb|AAK43867.1 putative T-complex ... 364 e-101
TC86594 homologue to GP|9293959|dbj|BAB01862.1 chaperonin t-com... 230 1e-60
BE325936 homologue to GP|13877579|gb putative T-complex protein ... 222 2e-58
TC76913 similar to SP|O04450|TCPE_ARATH T-complex protein 1 eps... 203 2e-52
BG588678 similar to GP|13877579|gb putative T-complex protein 1 ... 197 8e-51
TC79654 homologue to GP|17979243|gb|AAL49938.1 AT3g11830/F26K24_... 149 3e-36
TC86609 homologue to GP|15809886|gb|AAL06871.1 AT5g20890/F22D1_6... 108 7e-24
CA859232 similar to PIR|T37665|T37 probable t-complex protein 1 ... 107 1e-23
TC89333 homologue to PIR|T01855|T01855 probable chaperonin-conta... 80 1e-22
TC78742 similar to GP|3819164|emb|CAA09989.1 cytosolic chaperoni... 100 2e-21
TC89014 similar to PIR|T01855|T01855 probable chaperonin-contain... 99 3e-21
BQ751277 similar to PIR|T37665|T37 probable t-complex protein 1 ... 92 5e-19
TC81888 homologue to GP|3819164|emb|CAA09989.1 cytosolic chapero... 91 8e-19
TC87609 homologue to GP|22135966|gb|AAM91565.1 TCP-1 chaperonin-... 88 7e-18
TC92400 homologue to GP|15809886|gb|AAL06871.1 AT5g20890/F22D1_6... 85 8e-17
BQ751278 similar to PIR|T37665|T37 probable t-complex protein 1 ... 69 3e-16
TC79193 similar to GP|17979243|gb|AAL49938.1 AT3g11830/F26K24_12... 65 5e-11
BG644350 similar to GP|14423532|gb putative chaperonin {Arabidop... 46 3e-05
>TC79813 similar to GP|13877579|gb|AAK43867.1 putative T-complex protein 1
theta subunit; TCP-1-Theta {Arabidopsis thaliana},
partial (64%)
Length = 1111
Score = 566 bits (1459), Expect(2) = e-172
Identities = 300/356 (84%), Positives = 311/356 (87%)
Frame = +3
Query: 32 IDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKILVLAGKA 91
IDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKILVLA KA
Sbjct: 6 IDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKILVLASKA 185
Query: 92 QQEEIGDGANLTISFAGELLQGAEELIRMGLHPSEIISGYTKAIAKTIEILDELVEKGSE 151
QQEEIGDGANLTISFAGELLQGAEE GSE
Sbjct: 186 QQEEIGDGANLTISFAGELLQGAEE--------------------------------GSE 269
Query: 152 SMDVRDKVQVISRMRAAVASKQFGQEDTICSLVADACIQVCPKNPANFNVDNVRVAKLLG 211
+MDVRDK QVISRMRAAVASKQFGQEDT+CSL+ADACIQVCPKNPANFNVDNVRVAKLLG
Sbjct: 270 NMDVRDKEQVISRMRAAVASKQFGQEDTLCSLIADACIQVCPKNPANFNVDNVRVAKLLG 449
Query: 212 GGLHNSTVVRGMVLKSDAVGSIKRIEKAKVAVFVSGVDTSATDTKGTVLIHSAEQLENYS 271
GGLHNS VV GMVL++DAVGSIK IEKAKVAVF GVDTSAT+TKGTVLIHSAEQLENYS
Sbjct: 450 GGLHNSAVVPGMVLRTDAVGSIKHIEKAKVAVFAGGVDTSATETKGTVLIHSAEQLENYS 629
Query: 272 KTEEAKVEELIKAVADSGAKVIVSGGAVGEMALHFCERYKLMVLKISSKFELRRFCRTTG 331
KTEEAKVEELIKAVADSGAKVIVSGGAVGEMALHFCERYKLMVLKISSKFELRRFCRTTG
Sbjct: 630 KTEEAKVEELIKAVADSGAKVIVSGGAVGEMALHFCERYKLMVLKISSKFELRRFCRTTG 809
Query: 332 AVAVLKLSQPNPDDLGYVDSVSVEEVGGVTVTIVKNEEGGNSVSTVVLRGSTDSIL 387
+VA+LKL QPNPDDLG+ DSVSVEE+GG VTIVKNE GNSV+TVVLRGSTDSIL
Sbjct: 810 SVAMLKLCQPNPDDLGFADSVSVEEIGGARVTIVKNEVDGNSVATVVLRGSTDSIL 977
Score = 57.4 bits (137), Expect(2) = e-172
Identities = 31/45 (68%), Positives = 35/45 (76%), Gaps = 1/45 (2%)
Frame = +2
Query: 388 DDLERAVDDGVNTYKAMCKDSRTV-PGAAATEIELAKRVKDFSFK 431
+DLERAVDDGVNTYKAMC+DSR + EIELAKRV+ SFK
Sbjct: 977 NDLERAVDDGVNTYKAMCRDSRHLYLELLQLEIELAKRVERLSFK 1111
>TC79552 similar to GP|13877579|gb|AAK43867.1 putative T-complex protein 1
theta subunit; TCP-1-Theta {Arabidopsis thaliana},
partial (39%)
Length = 1063
Score = 387 bits (993), Expect = e-108
Identities = 192/210 (91%), Positives = 203/210 (96%)
Frame = +3
Query: 316 KISSKFELRRFCRTTGAVAVLKLSQPNPDDLGYVDSVSVEEVGGVTVTIVKNEEGGNSVS 375
KISSKFELRRFCRTTG+VA+LKLS+PNPDDLGYVDSVSVEE+GG VTIVKNEEGGNSV+
Sbjct: 3 KISSKFELRRFCRTTGSVAMLKLSRPNPDDLGYVDSVSVEEIGGARVTIVKNEEGGNSVA 182
Query: 376 TVVLRGSTDSILDDLERAVDDGVNTYKAMCKDSRTVPGAAATEIELAKRVKDFSFKETGL 435
TVVLRGSTDSILDD+ERAVDDGVNTYK MC+DSR VPGAAATEIELAKRVK+FSFKETGL
Sbjct: 183 TVVLRGSTDSILDDIERAVDDGVNTYKTMCRDSRIVPGAAATEIELAKRVKEFSFKETGL 362
Query: 436 DQYAIAKFAESFEMIPRTLAENAGLNAMEIISSLYAEHASGNTKVGIDLEEGVCKDVTTT 495
DQYAIAKFAESFEMIPRTLAENAGLNAMEIISSLYAEHASGNTKVGIDL+EGVCKDVTTT
Sbjct: 363 DQYAIAKFAESFEMIPRTLAENAGLNAMEIISSLYAEHASGNTKVGIDLDEGVCKDVTTT 542
Query: 496 HVWDLHVTKFFALKYAADAVCTVLRVDQVI 525
HVWDLH+ K FALKYAADA CTVLRVDQ+I
Sbjct: 543 HVWDLHMAKLFALKYAADAACTVLRVDQII 632
>TC91063 similar to GP|13877579|gb|AAK43867.1 putative T-complex protein 1
theta subunit; TCP-1-Theta {Arabidopsis thaliana},
partial (35%)
Length = 758
Score = 364 bits (935), Expect = e-101
Identities = 187/207 (90%), Positives = 193/207 (92%)
Frame = +3
Query: 8 YGIQSMLKEGHKHLSGLDEAVIKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTND 67
YGIQSMLKEGHKHLSGLDEAV+KNIDAC QLSTITRTSLGPNGMNKMVINHLDKLFVTND
Sbjct: 135 YGIQSMLKEGHKHLSGLDEAVLKNIDACNQLSTITRTSLGPNGMNKMVINHLDKLFVTND 314
Query: 68 AATIVNELEVQHPAAKILVLAGKAQQEEIGDGANLTISFAGELLQGAEELIRMGLHPSEI 127
AATIVNELEVQHPAAKILVLAGKAQQEEIGDGANLTISFAGELL GAEELIRMGLHPSEI
Sbjct: 315 AATIVNELEVQHPAAKILVLAGKAQQEEIGDGANLTISFAGELLHGAEELIRMGLHPSEI 494
Query: 128 ISGYTKAIAKTIEILDELVEKGSESMDVRDKVQVISRMRAAVASKQFGQEDTICSLVADA 187
ISGYTKAIAKT+EILDELVE+GS++MDVRDK QVISRM+AAVASKQFGQEDTICSLVADA
Sbjct: 495 ISGYTKAIAKTMEILDELVEEGSDNMDVRDKEQVISRMKAAVASKQFGQEDTICSLVADA 674
Query: 188 CIQVCPKNPANFNVDNVRVAKLLGGGL 214
CIQVCPKNP NF KLL GL
Sbjct: 675 CIQVCPKNPVNF*CGQCSCPKLLXXGL 755
>TC86594 homologue to GP|9293959|dbj|BAB01862.1 chaperonin t-complex
protein alpha subunit {Arabidopsis thaliana}, partial
(98%)
Length = 2113
Score = 230 bits (586), Expect = 1e-60
Identities = 150/516 (29%), Positives = 268/516 (51%), Gaps = 20/516 (3%)
Frame = +2
Query: 30 KNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKILVLAG 89
+N+ AC+ ++ I +TSLGP G++KM+++ + + +TND ATI+ LEV+HPAAK+LV
Sbjct: 134 QNVVACQAVANIVKTSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELA 313
Query: 90 KAQQEEIGDGANLTISFAGELLQGAEELIRMGLHPSEIISGYTKAIAKTIEILDELVEKG 149
+ Q E+GDG + A ELL+ A +L+R +HP+ IISGY A+ + + +D EK
Sbjct: 314 ELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVD---EKL 484
Query: 150 SESMDVRDKVQVISRMRAAVASKQF-GQEDTICSLVADACIQVCPKN---PANFNVDNVR 205
+ ++ K +I+ + +++SK G D +LV +A V N + + +
Sbjct: 485 AVKVEKLGKDSLINCAKTSMSSKLIAGDSDFFANLVVEAVQAVKMTNARGEVRYPIKGIN 664
Query: 206 VAKLLGGGLHNSTVVRGMVLKSD--AVGSIKRIEKAKVAVFVSGVDTSATDTKGTVLIHS 263
+ K G +S ++ G L + A G ++ AK+A + + VL+
Sbjct: 665 ILKAHGKSARDSFLMNGYALNTGRAAQGMPLKVSPAKIACLDFNLQKTKMQLGVQVLVSD 844
Query: 264 AEQLENYSKTEEAKVEELIKAVADSGAKVIVSGGAVGEMALHFCERYKLMVLKISSKFEL 323
+LE + E +E I+ + +GA V+++ + +MAL + + ++ K ++
Sbjct: 845 PRELEKIRQREADMTKERIEKLLKAGANVVLTTKGIDDMALKYFVEAGAIAVRRVRKEDM 1024
Query: 324 RRFCRTTGAVAVLKLSQP------NPDDLGYVDSVSVEEVGGVTVTIVKNEEGGNSVSTV 377
R + TGA V + P LG D V E + V ++K + ++VS +
Sbjct: 1025RHVAKATGATLVSTFADMEGEETFEPSFLGTADEVVEERIADDAVIMIKGTKTSSAVS-L 1201
Query: 378 VLRGSTDSILDDLERAVDDGVNTYKAMCKDSRTVPGAAATEIELAKRVKDFSFKETGLDQ 437
+LRG+ D +LD+++RA+ D ++ K + + V G A E L+ ++ + +Q
Sbjct: 1202ILRGANDYMLDEMDRALHDALSIVKRTLESNTVVAGGGAVEAALSVYLEYLATTLGSREQ 1381
Query: 438 YAIAKFAESFEMIPRTLAENAGLNAMEIISSLYAEHASGNTK--------VGIDLEEGVC 489
AIA+FAES +IP+ LA NA +A ++++ L A H + TK G+DL EG
Sbjct: 1382LAIAEFAESLLIIPKVLAVNAAKDATDLVAKLRACHYAAQTKADKKHLSSTGLDLSEGKT 1561
Query: 490 KDVTTTHVWDLHVTKFFALKYAADAVCTVLRVDQVI 525
++ V + ++K +++A +A T+LR+D +I
Sbjct: 1562RNNLEAGVIEPAMSKVKIIQFATEAAITILRIDDMI 1669
>BE325936 homologue to GP|13877579|gb putative T-complex protein 1 theta
subunit; TCP-1-Theta {Arabidopsis thaliana}, partial
(23%)
Length = 473
Score = 222 bits (566), Expect = 2e-58
Identities = 112/118 (94%), Positives = 115/118 (96%)
Frame = +2
Query: 7 SYGIQSMLKEGHKHLSGLDEAVIKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTN 66
+YG+QSMLKEGHKHLSGLDEAV+KNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTN
Sbjct: 71 AYGMQSMLKEGHKHLSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTN 250
Query: 67 DAATIVNELEVQHPAAKILVLAGKAQQEEIGDGANLTISFAGELLQGAEELIRMGLHP 124
DAATIVNELEVQHPAAKILVLA KAQQEEIGDGANLTISFAGELLQGAEELIRMG P
Sbjct: 251 DAATIVNELEVQHPAAKILVLASKAQQEEIGDGANLTISFAGELLQGAEELIRMGFAP 424
Score = 36.2 bits (82), Expect = 0.032
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = +3
Query: 90 KAQQEEIGDGANLTISFAGELLQGAEELIRMGLHPSEIISGYTKAI 135
+ + ++G G G + L+ GLHPSEII GYTKAI
Sbjct: 321 RLNKRKLGMGQI*LFHLLGSFCKAPRNLLGWGLHPSEIIIGYTKAI 458
>TC76913 similar to SP|O04450|TCPE_ARATH T-complex protein 1 epsilon
subunit (TCP-1-epsilon) (CCT-epsilon). [Mouse-ear
cress], complete
Length = 1965
Score = 203 bits (516), Expect = 2e-52
Identities = 140/517 (27%), Positives = 253/517 (48%), Gaps = 5/517 (0%)
Frame = +1
Query: 15 KEGHKHLSGLDEAVIKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNE 74
+E L GLD A NI A K ++ I RTSLGP GM+KM+ + + ++ND ATI+ +
Sbjct: 160 QESKNRLRGLD-AQKANISAGKAVARILRTSLGPKGMDKMLQSPDGDVIISNDGATILEQ 336
Query: 75 LEVQHPAAKILVLAGKAQQEEIGDGANLTISFAGELLQGAEELIRMGLHPSEIISGYTKA 134
++V + AK++V ++Q EIGDG + AG LL+ AE L+ G+HP I GY A
Sbjct: 337 MDVDNQIAKLMVELSRSQDYEIGDGTTGVVVLAGSLLEQAERLLERGIHPIRIAEGYEMA 516
Query: 135 IAKTIEILDELVEKGSESMDVRDKVQVISRMRAAVASKQFGQ-EDTICSLVADACIQVCP 193
+E L+++ K + + +I ++SK + + ++ + A + V
Sbjct: 517 SRIAVENLEKIANKFEFGETILE--PLIQTCMTTLSSKIVNRCKRSLAEIAVKAVLAVAD 690
Query: 194 KNPANFNVDNVRVAKLLGGGLHNSTVVRGMVLKSDA--VGSIKRIEKAKVAVFVSGVDTS 251
+ N+D ++V +GG L ++ +V G+++ D K+IE AK+A+ +
Sbjct: 691 LERKDVNLDLIKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKQIEDAKIAILTCPFEPP 870
Query: 252 ATDTKGTVLIHSAEQLENYSKTEEAKVEELIKAVADSGAKVIVSGGAVGEMALHFCERYK 311
TK V I + E+ + K E+ +++++ D GA +++ + A H
Sbjct: 871 KPKTKHKVDIDTVEKFQTLRKQEQKYFDDMVQQCKDVGATLVICQWGFDDEANHLLMHRN 1050
Query: 312 LMVLKISSKFELRRFCRTTGAVAVLKLSQPNPDDLGYVDSVSVEEVGGVTVTIVKNEEGG 371
L ++ EL TG V + + + LG V + G ++ E
Sbjct: 1051LPAVRWVGGVELELIAIATGGRIVPRFQELTAEKLGKAGIVREKAFGTTKDRMLYIEHCA 1230
Query: 372 NS-VSTVVLRGSTDSILDDLERAVDDGVNTYKAMCKDSRTVPGAAATEIELAKRVKDFSF 430
NS T+ +RG I+++ +R++ D + + + +++ V G + EI + V+ +
Sbjct: 1231NSRAVTIFIRGGNKMIIEETKRSIHDALCVARNLIRNNSIVYGGGSAEIACSIAVEAAAD 1410
Query: 431 KETGLDQYAIAKFAESFEMIPRTLAENAGLNAMEIISSLYAEH-ASGNTKVGIDLEEGVC 489
+ G++QYAI F ++ E IP LAEN+GL +E +SS+ ++ N GID +
Sbjct: 1411RYPGVEQYAIRAFGDALESIPMALAENSGLQPIETLSSVKSQQITEKNPHFGIDCNDVGT 1590
Query: 490 KDVTTTHVWDLHVTKFFALKYAADAVCTVLRVDQVIN 526
D+ +V++ + K + A V +L++D VI+
Sbjct: 1591NDMREQNVFETLIGKQQQILLATQVVKMILKIDDVIS 1701
>BG588678 similar to GP|13877579|gb putative T-complex protein 1 theta
subunit; TCP-1-Theta {Arabidopsis thaliana}, partial
(21%)
Length = 607
Score = 197 bits (501), Expect = 8e-51
Identities = 98/107 (91%), Positives = 101/107 (93%)
Frame = +3
Query: 419 IELAKRVKDFSFKETGLDQYAIAKFAESFEMIPRTLAENAGLNAMEIISSLYAEHASGNT 478
IELAKRVKDFSFKETGLDQYAIAKFAESFEMIPRTLAENAGLNAMEIISSLYAEHA+GNT
Sbjct: 3 IELAKRVKDFSFKETGLDQYAIAKFAESFEMIPRTLAENAGLNAMEIISSLYAEHANGNT 182
Query: 479 KVGIDLEEGVCKDVTTTHVWDLHVTKFFALKYAADAVCTVLRVDQVI 525
KVGIDLE GVCKDV+T VWDLHVTK FALKYA DA CTVLRVDQ+I
Sbjct: 183 KVGIDLEPGVCKDVSTMRVWDLHVTKLFALKYATDAACTVLRVDQII 323
>TC79654 homologue to GP|17979243|gb|AAL49938.1 AT3g11830/F26K24_12
{Arabidopsis thaliana}, partial (72%)
Length = 1235
Score = 149 bits (375), Expect = 3e-36
Identities = 101/393 (25%), Positives = 187/393 (46%), Gaps = 7/393 (1%)
Frame = +1
Query: 13 MLKEGHKHLSGLDEAVIKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIV 72
+LKEG G + ++ NI+AC ++ + RT+LGP GM+K++ + + ++ND ATI+
Sbjct: 58 LLKEGTDTSQGKPQ-LVSNINACTAVADVVRTTLGPRGMDKLIHDDKGSVTISNDGATIM 234
Query: 73 NELEVQHPAAKILVLAGKAQQEEIGDGANLTISFAGELLQGAEELIRMGLHPSEIISGYT 132
L++ HPAAKILV K+Q E+GDG + A E L+ A+ I G+H +I Y
Sbjct: 235 KLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHSQNLIRSYR 414
Query: 133 KAIAKTIEILDELVEKGSESMDVRDKVQVISRMRAAVASKQF--GQEDTICSLVADACIQ 190
A + IE + EL E + +K ++ + A S + G+++ S+V DA I
Sbjct: 415 TAGSLAIEKVKELA-VSIEGKSLEEKKSLLGKCAATTLSSKLIGGEKEFFASMVVDAVIA 591
Query: 191 VCPKNPANFNVDNVRVAKLLGGGLHNSTVVRGMVLK-----SDAVGSIKRIEKAKVAVFV 245
+ + N + + K+ GG + +S +V G+ K + K+ K+ +
Sbjct: 592 IGTDDRLNM----IGIKKVPGGNMRDSFLVNGVAFKKTFSYAGFEQQPKKFLDPKILLLN 759
Query: 246 SGVDTSATDTKGTVLIHSAEQLENYSKTEEAKVEELIKAVADSGAKVIVSGGAVGEMALH 305
++ + + + Q ++ E + + SGAKV++S A+G++A
Sbjct: 760 VELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKWDKCVQSGAKVVLSRLAIGDLATQ 939
Query: 306 FCERYKLMVLKISSKFELRRFCRTTGAVAVLKLSQPNPDDLGYVDSVSVEEVGGVTVTIV 365
+ + ++ +L+R TG ++ + LG + ++VG I
Sbjct: 940 YFADRDIFCAGRVAEEDLKRVAAATGGTVQTSVNNIIDEVLGTCEIFEEKQVGNERFNIF 1119
Query: 366 KNEEGGNSVSTVVLRGSTDSILDDLERAVDDGV 398
G + +T+VLRG D +++ ER++ D +
Sbjct: 1120NGCPSGQT-ATIVLRGGADQFIEEAERSLHDAI 1215
>TC86609 homologue to GP|15809886|gb|AAL06871.1 AT5g20890/F22D1_60
{Arabidopsis thaliana}, partial (60%)
Length = 1268
Score = 108 bits (269), Expect = 7e-24
Identities = 79/306 (25%), Positives = 134/306 (42%), Gaps = 2/306 (0%)
Frame = +2
Query: 222 GMVL-KSDAVGSIKRIEKAKVAVFVSGVDTSATDTKGT-VLIHSAEQLENYSKTEEAKVE 279
G +L K +G KRIE AK+ V + +DT G V + S ++ E+ K++
Sbjct: 8 GFILDKKIGIGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMTKVAEIEGAEKEKMK 187
Query: 280 ELIKAVADSGAKVIVSGGAVGEMALHFCERYKLMVLKISSKFELRRFCRTTGAVAVLKLS 339
E + + G V+ + ++ ++ + + R TG
Sbjct: 188 EKVNKIIGHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFD 367
Query: 340 QPNPDDLGYVDSVSVEEVGGVTVTIVKNEEGGNSVSTVVLRGSTDSILDDLERAVDDGVN 399
P LG + + +G + G + T+VLRG++ +LD+ ER++ D +
Sbjct: 368 NPESVKLGQCELIEEIMIGEDKLIKFSGVAMGQAC-TIVLRGASHHVLDEAERSLHDALC 544
Query: 400 TYKAMCKDSRTVPGAAATEIELAKRVKDFSFKETGLDQYAIAKFAESFEMIPRTLAENAG 459
DSR + G E+ +AK + + K G A+ F+ + IP T+A+NAG
Sbjct: 545 VLSQTVNDSRVLLGGGWPEMVMAKEIDALARKTPGKKSLAMEAFSRALLAIPTTIADNAG 724
Query: 460 LNAMEIISSLYAEHASGNTKVGIDLEEGVCKDVTTTHVWDLHVTKFFALKYAADAVCTVL 519
L++ E+IS L AEH + GID+ G D+ + + K L A +A +L
Sbjct: 725 LDSAELISQLRAEHQNEGCTAGIDVISGSVGDMVERGICEAFKVKQAVLLSATEAAEMIL 904
Query: 520 RVDQVI 525
RVD +I
Sbjct: 905 RVDDII 922
>CA859232 similar to PIR|T37665|T37 probable t-complex protein 1 epsilon
subunit - fission yeast (Schizosaccharomyces pombe),
partial (39%)
Length = 692
Score = 107 bits (267), Expect = 1e-23
Identities = 64/195 (32%), Positives = 108/195 (54%), Gaps = 1/195 (0%)
Frame = +1
Query: 21 LSGLDEAVIKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHP 80
LSG+ EA+ +I A K ++ I +TSLGP G++K++I+ + VTND ATI+ ++EV+H
Sbjct: 112 LSGI-EAIKSHILAAKTVANIIKTSLGPRGLDKILISSDGDITVTNDGATILTQMEVEHQ 288
Query: 81 AAKILVLAGKAQQEEIGDGANLTISFAGELLQGAEELIRMGLHPSEIISGYTKAIAKTIE 140
AK+LV K+Q +EIGDG + AG LL+ E L+ G+HP I G+ +A +E
Sbjct: 289 IAKLLVQLSKSQDDEIGDGTTGVVVLAGALLEQCETLLDRGIHPIRISDGFERACKIAVE 468
Query: 141 ILDELVEKGSESMDVRDKVQVISRMRAAVASKQFGQ-EDTICSLVADACIQVCPKNPANF 199
LD + + + D + ++ + ++ SK + D + DA + V +
Sbjct: 469 HLDSISDVVEFTKD--NTENLLKTAKTSLGSKIVSKHHDQFTKIAVDAVLSVADLERKDV 642
Query: 200 NVDNVRVAKLLGGGL 214
+ + ++V +GG L
Sbjct: 643 DFELIKVDGKVGGSL 687
>TC89333 homologue to PIR|T01855|T01855 probable chaperonin-containing TCP-1
complex gamma chain F9D12.18 - Arabidopsis thaliana,
partial (52%)
Length = 1182
Score = 80.1 bits (196), Expect(2) = 1e-22
Identities = 40/115 (34%), Positives = 67/115 (57%), Gaps = 1/115 (0%)
Frame = +3
Query: 413 GAAATEIELAKRVKDFSFKETGLDQYAIAKFAESFEMIPRTLAENAGLNAMEIISSLYAE 472
G ATE+ ++ +K S G++++ A +FE IPRTLA+N G+N + +++L +
Sbjct: 468 GGGATEMTVSAALKQKSSSIEGIEKWPYEAAAIAFESIPRTLAQNCGVNVIRTMTALQGK 647
Query: 473 HASG-NTKVGIDLEEGVCKDVTTTHVWDLHVTKFFALKYAADAVCTVLRVDQVIN 526
HA+G N +GID GV D+ +WD + K K A +A C +LR+D +++
Sbjct: 648 HANGENAWIGIDGNTGVIADMKERKIWDAYNVKAQTFKTAIEAACMLLRIDDIVS 812
Score = 44.3 bits (103), Expect(2) = 1e-22
Identities = 26/123 (21%), Positives = 65/123 (52%), Gaps = 1/123 (0%)
Frame = +2
Query: 292 VIVSGGAVGEMALHFCERYKLMVLKISSKFELRRFCRTTGAVAVLKLSQPNPDDLGYVDS 351
++V+ + ++A H+ ++ + ++ K + R + GAV V + + D+G
Sbjct: 104 LVVTEKGLSDLACHYLSKHGVSAIRRLRKTDNNRIAKACGAVIVNRPDELQESDVGTGAG 283
Query: 352 V-SVEEVGGVTVTIVKNEEGGNSVSTVVLRGSTDSILDDLERAVDDGVNTYKAMCKDSRT 410
+ V+++G + + + + TV+LRG++ +L+++ER + D ++ + + K+ +
Sbjct: 284 LFEVKKIGDEYFAFIVDCKEPKAC-TVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKL 460
Query: 411 VPG 413
VPG
Sbjct: 461 VPG 469
>TC78742 similar to GP|3819164|emb|CAA09989.1 cytosolic chaperonin
delta-subunit {Glycine max}, partial (38%)
Length = 755
Score = 99.8 bits (247), Expect = 2e-21
Identities = 59/190 (31%), Positives = 102/190 (53%), Gaps = 2/190 (1%)
Frame = +3
Query: 25 DEAVIKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKI 84
D+ NI A + ++ RTSLGP GM+KM+ +++ +TND ATI+N+++V PAAK+
Sbjct: 186 DDVRQSNIIAARSVANAVRTSLGPKGMDKMISTSSNEVIITNDGATILNKMQVLQPAAKM 365
Query: 85 LVLAGKAQQEEIGDGANLTISFAGELLQGAEELIRMGLHPSEIISGYTKAIAKTIEILDE 144
LV K+Q GDG + AG LL+ L+ G+HP+ I KA K +++L
Sbjct: 366 LVELSKSQDSAAGDGTTTVVVIAGALLEKCLLLLSHGIHPTVISDSLHKASVKAVDVLTA 545
Query: 145 LVEKGSESMDVRDKVQVISRMRAAVASKQFGQEDTICSLVA-DACIQVC-PKNPANFNVD 202
+ + +++ D+ ++ ++ SK Q ++ + +A D+ + V P P ++
Sbjct: 546 M----AVPVELTDRDSLVKSASTSLNSKVVSQYSSLLAPIAXDSXLSVIDPARPEMVDLR 713
Query: 203 NVRVAKLLGG 212
+V LGG
Sbjct: 714 DVXXVXKLGG 743
>TC89014 similar to PIR|T01855|T01855 probable chaperonin-containing TCP-1
complex gamma chain F9D12.18 - Arabidopsis thaliana,
partial (20%)
Length = 736
Score = 99.4 bits (246), Expect = 3e-21
Identities = 57/156 (36%), Positives = 87/156 (55%)
Frame = +2
Query: 13 MLKEGHKHLSGLDEAVIKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIV 72
+LK+ K SG + NI A K ++ I RT+LGP M KM+++ + VTND I+
Sbjct: 284 VLKDSLKRESG-PKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAIL 460
Query: 73 NELEVQHPAAKILVLAGKAQQEEIGDGANLTISFAGELLQGAEELIRMGLHPSEIISGYT 132
EL++ HPAAK ++ + Q EE+GDG I AGE+L AE I HP+ I Y
Sbjct: 461 RELDIAHPAAKSMIELSRTQDEEVGDGTTSVIILAGEMLHVAEAFIDKNYHPTVICRAYN 640
Query: 133 KAIAKTIEILDELVEKGSESMDVRDKVQVISRMRAA 168
KA+ I +D++ + +D +D+ Q++ +AA
Sbjct: 641 KALEDAIAAIDKI----AMPIDAQDRXQMLGLEKAA 736
>BQ751277 similar to PIR|T37665|T37 probable t-complex protein 1 epsilon
subunit - fission yeast (Schizosaccharomyces pombe),
partial (39%)
Length = 785
Score = 92.0 bits (227), Expect = 5e-19
Identities = 62/209 (29%), Positives = 102/209 (48%), Gaps = 5/209 (2%)
Frame = -3
Query: 322 ELRRFCRTTGAVAVLKLSQPNPDDLGYVDSVSVEEVGGVTVTIVKNEEGGNSVS-TVVLR 380
E+ F T V + P+ LG SV G ++ EE N+ + TV +R
Sbjct: 768 EIELFAIATNGRIVPRFEDLKPEKLGTAGSVREMTFGTTREKMLVIEECANTRAVTVFVR 589
Query: 381 GSTDSILDDLERAVDDGVNTYKAMCKDSRTVPGAAATEIELAKRVKDFSFKETGLDQYAI 440
GS I+D+ +R++ D + + + +D+R V G A EI + V+D + K GL+QYA+
Sbjct: 588 GSNKMIIDEAKRSLHDALCVVRNLVRDNRVVYGGGAAEIACSLAVEDAAVKTPGLEQYAM 409
Query: 441 AKFAESFEMIPRTLAENAGLNAMEIISSLYAEHASGNTK----VGIDLEEGVCKDVTTTH 496
FAE+ + +P LAEN+GLN + ++ + ++ K +G+D D+
Sbjct: 408 RAFAEALDAVPMALAENSGLNPIATLAEVKSQQVKAGAKERGRLGVDCMSRGNNDMKEAF 229
Query: 497 VWDLHVTKFFALKYAADAVCTVLRVDQVI 525
V D ++K L A VL+V+ VI
Sbjct: 228 VIDPLISKRQQLMLATQLCRMVLKVNNVI 142
>TC81888 homologue to GP|3819164|emb|CAA09989.1 cytosolic chaperonin
delta-subunit {Glycine max}, partial (29%)
Length = 728
Score = 91.3 bits (225), Expect = 8e-19
Identities = 47/151 (31%), Positives = 86/151 (56%)
Frame = +3
Query: 375 STVVLRGSTDSILDDLERAVDDGVNTYKAMCKDSRTVPGAAATEIELAKRVKDFSFKETG 434
+TV++RGS +LD+ ER++ D + + + + G A EIEL++++ ++ G
Sbjct: 9 TTVLVRGSNLLVLDEAERSLHDALCVVRCLVAKRFLIAGGGAPEIELSRQLGAWAKVLHG 188
Query: 435 LDQYAIAKFAESFEMIPRTLAENAGLNAMEIISSLYAEHASGNTKVGIDLEEGVCKDVTT 494
++ Y I FAE+ E++P TLAENAGLN + I++ L HA G GI++ +G ++
Sbjct: 189 MEGYCIRAFAEALEVVPYTLAENAGLNPIAIVTELRNRHAKGEINTGINVRKGQITNILE 368
Query: 495 THVWDLHVTKFFALKYAADAVCTVLRVDQVI 525
+V + A+ A + V +L++D ++
Sbjct: 369 ENVVQPLLVSTSAITLATECVRMILKIDDIV 461
>TC87609 homologue to GP|22135966|gb|AAM91565.1 TCP-1 chaperonin-like
protein {Arabidopsis thaliana}, partial (96%)
Length = 1899
Score = 88.2 bits (217), Expect = 7e-18
Identities = 78/323 (24%), Positives = 142/323 (43%), Gaps = 13/323 (4%)
Frame = +3
Query: 216 NSTVVRGMVLK--SDAVGSIKRIEKAKVAVFVSGVDTSATDTKGTVLIHSAEQLENYSKT 273
++ +V G+VL S +R E + ++ ++ +AEQ E
Sbjct: 609 DTRLVEGLVLDHGSRHPDMKRRAENCHILTCNVSLEYEKSEINSGFFYSNAEQREAMVIA 788
Query: 274 EEAKVEELIKAVADSGAKV---------IVSGGAVGEMALHFCERYKLMVLKISSKFELR 324
E +V+E ++ + + KV I++ + +L R ++ L + + +
Sbjct: 789 ERRQVDEKVRKIIELKRKVCPDNDSNFVIINQKGIDPPSLDMLAREGIIALLRAKRRNME 968
Query: 325 RFCRTTGAVAVLKLSQPNPDDLGYVDSVSVEEVGGVTVTIVKNEEGGNSVSTVVLRGSTD 384
R G AV + P+ LG+ V +G T V+N + S T++++G D
Sbjct: 969 RLVLACGGEAVNSVDDLTPECLGWAGLVYEHVLGEEKYTFVENVKNPFSC-TILIKGPND 1145
Query: 385 SILDDLERAVDDGVNTYKAMCKDSRTVPGAAATEIELAKRVKDFSFKET--GLDQYAIAK 442
+ ++ AV DG+ K +D V GA A E+ + + + K+T G Q +
Sbjct: 1146HTIAQIKDAVRDGLRAVKNTIEDESVVLGAGAFEVAARQHLMN-EVKKTVQGRAQLGVEA 1322
Query: 443 FAESFEMIPRTLAENAGLNAMEIISSLYAEHASGNTKVGIDLEEGVCKDVTTTHVWDLHV 502
FA++ ++P+TLAEN+GL+ ++I +L EH GN VG+ G D ++D +
Sbjct: 1323FADALLVVPKTLAENSGLDTQDVIIALKGEHDRGNI-VGLSQNTGEPIDPQMEGIFDNYS 1499
Query: 503 TKFFALKYAADAVCTVLRVDQVI 525
K + +L VD+VI
Sbjct: 1500VKRQIINSGPVIASQLLLVDEVI 1568
Score = 80.5 bits (197), Expect = 1e-15
Identities = 38/118 (32%), Positives = 69/118 (58%)
Frame = +1
Query: 27 AVIKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKILV 86
A+ NI+A K L + +++LGP G KM++ + +T D T++ E+++Q+P A ++
Sbjct: 43 ALHMNINAAKGLQXVLKSNLGPKGTIKMLVGGSGDIKLTKDGNTLLKEMQIQNPTAIMIA 222
Query: 87 LAGKAQQEEIGDGANLTISFAGELLQGAEELIRMGLHPSEIISGYTKAIAKTIEILDE 144
AQ + GDG T+ F GEL++ +E I G+HP ++ G+ A T++ L++
Sbjct: 223 RTAVAQDDISGDGTTSTVLFIGELMKQSERYIDEGMHPRVLVDGFEIAKRATLQFLEK 396
>TC92400 homologue to GP|15809886|gb|AAL06871.1 AT5g20890/F22D1_60
{Arabidopsis thaliana}, partial (25%)
Length = 581
Score = 84.7 bits (208), Expect = 8e-17
Identities = 47/134 (35%), Positives = 76/134 (56%), Gaps = 2/134 (1%)
Frame = +2
Query: 3 FNMQSYGIQSMLKEGHKHLSGLDEAVIKNIDACKQLSTITRTSLGPNGMNKMV--INHLD 60
F + S I + K+ G + A + + ++ + +T+LGP GM+K++
Sbjct: 56 F*VSSMAIDRIFKDEASEEKG-ERARMSSFVGAMAIADLVKTTLGPKGMDKILQSTGRGR 232
Query: 61 KLFVTNDAATIVNELEVQHPAAKILVLAGKAQQEEIGDGANLTISFAGELLQGAEELIRM 120
++ VTND ATI+ L + +PAAK+LV K Q +E+GDG + AGELL+ AE+L+
Sbjct: 233 EVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAA 412
Query: 121 GLHPSEIISGYTKA 134
+HP II+G+ A
Sbjct: 413 KIHPMTIIAGFRMA 454
>BQ751278 similar to PIR|T37665|T37 probable t-complex protein 1 epsilon
subunit - fission yeast (Schizosaccharomyces pombe),
partial (26%)
Length = 596
Score = 68.9 bits (167), Expect(2) = 3e-16
Identities = 35/84 (41%), Positives = 56/84 (66%)
Frame = +2
Query: 16 EGHKHLSGLDEAVIKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNEL 75
+G K +EAV +I A + ++ I +TSLGP G++K++I+ + VTND ATI+ ++
Sbjct: 161 QGKKKRQYGNEAVKNHILAARTVANIVKTSLGPRGLDKILISPDGDITVTNDGATILQQM 340
Query: 76 EVQHPAAKILVLAGKAQQEEIGDG 99
E+ + AK+LV K+Q +EIGDG
Sbjct: 341 EISNHVAKLLVELSKSQDDEIGDG 412
Score = 34.3 bits (77), Expect(2) = 3e-16
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +3
Query: 104 ISFAGELLQGAEELIRMGLHPSEIISGYTKAIAKTIEILDEL 145
+ AG LL+ A ELI G+HP I GY +A + LD +
Sbjct: 426 VVLAGALLEQAAELIDKGIHPIRIADGYDQACDIAVAELDNI 551
>TC79193 similar to GP|17979243|gb|AAL49938.1 AT3g11830/F26K24_12
{Arabidopsis thaliana}, partial (24%)
Length = 789
Score = 65.5 bits (158), Expect = 5e-11
Identities = 36/113 (31%), Positives = 62/113 (54%), Gaps = 3/113 (2%)
Frame = +3
Query: 416 ATEIELAKRVKDFSFKETGLDQYAIAKFAESFEMIPRTLAENAGLNAMEIISSLYAEHA- 474
A ++E+++ ++ + G Q I +A++ E+IPR L +NAG +A ++++ L +HA
Sbjct: 3 AIDMEISRYLRQHARTIAGKSQLFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHAL 182
Query: 475 -SG-NTKVGIDLEEGVCKDVTTTHVWDLHVTKFFALKYAADAVCTVLRVDQVI 525
SG G+D+ G D VW+ V K A+ A +A C VL VD+ +
Sbjct: 183 PSGEGAPFGVDIATGGIADSFANFVWEPAVVKINAINAATEAACLVLSVDETV 341
>BG644350 similar to GP|14423532|gb putative chaperonin {Arabidopsis
thaliana}, partial (41%)
Length = 672
Score = 46.2 bits (108), Expect = 3e-05
Identities = 26/77 (33%), Positives = 42/77 (53%)
Frame = +3
Query: 434 GLDQYAIAKFAESFEMIPRTLAENAGLNAMEIISSLYAEHASGNTKVGIDLEEGVCKDVT 493
G Q + FA + +IP+TLAEN+GL+ ++I +L EH GN VG++ G D
Sbjct: 423 GRAQLGVEAFANALLVIPKTLAENSGLDTQDVIIALTGEHDKGNV-VGLNQHTGEPVDPQ 599
Query: 494 TTHVWDLHVTKFFALKY 510
++D + K +K+
Sbjct: 600 MEGIFDNYSVKRQIVKF 650
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.316 0.132 0.362
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,802,637
Number of Sequences: 36976
Number of extensions: 124547
Number of successful extensions: 572
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 559
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 561
length of query: 528
length of database: 9,014,727
effective HSP length: 101
effective length of query: 427
effective length of database: 5,280,151
effective search space: 2254624477
effective search space used: 2254624477
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)
Lotus: description of TM0023.15