TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0022.23
         (1569 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

BG586266 similar to GP|7267666|em RNA-directed DNA polymerase-li...   144  2e-34
BG585866                                                              136  6e-32
BG647708 weakly similar to GP|13786450|gb| putative reverse tran...    77  5e-14
BE248682 similar to GP|18568269|gb putative gag-pol polyprotein ...    73  1e-12
BQ148771                                                               69  1e-11
BG456581                                                               62  2e-09
TC83437 weakly similar to PIR|D86384|D86384 unknown protein [imp...    60  7e-09
BG647160 homologue to GP|15004435|gb| maturase {Ionopsis satyrio...    60  9e-09
BF650289 weakly similar to GP|9049283|dbj| orf129a {Beta vulgari...    59  2e-08
BG586862                                                               57  6e-08
TC83226 weakly similar to PIR|G86419|G86419 probable reverse tra...    57  7e-08
TC91765 weakly similar to GP|19881779|gb|AAM01180.1 Putative ret...    56  1e-07
BQ122106 similar to GP|9366656|emb|C probable similar to ring-h2...    55  3e-07
BG585499                                                               52  1e-06
TC77455 similar to GP|22335695|dbj|BAC10549. nine-cis-epoxycarot...    51  3e-06
TC83398 similar to PIR|T05150|T05150 hypothetical protein F18E5....    50  9e-06
BG587113 weakly similar to PIR|A84888|A8 hypothetical protein At...    47  4e-05
BG447966 weakly similar to PIR|G96509|G96 protein F27F5.21 [impo...    36  2e-04
BF006335 similar to GP|14334538|gb| unknown protein {Arabidopsis...    40  8e-04
TC93101                                                                43  8e-04

>BG586266 similar to GP|7267666|em RNA-directed DNA polymerase-like protein
            {Arabidopsis thaliana}, partial (18%)
          Length = 789

 Score =  144 bits (364), Expect = 2e-34
 Identities = 80/201 (39%), Positives = 117/201 (57%), Gaps = 1/201 (0%)
 Frame = -3

Query: 804  KVMVNRLRQFLQELIGPLQSSFIPGRGTIDNAIILQKIVHHMNSRRGKCQ-NVVFKLDLE 862
            K++  R++  L+ +I P QS+F+PGR   DN +I  KI+H++     K   ++  K D+ 
Sbjct: 724  KILSKRMQPLLRSIISPSQSAFVPGRAISDNVLITHKILHYLRQSGAKKHVSMAVKTDMT 545

Query: 863  KACGSVSWAFLRDTLCFFGFPPTSVSLIMFCVSSSSLSLLWNGVKLPPIAPSRGLR*GDP 922
            KA   ++W FLR+ L   GF    +S IM CVS+ S S L NG     + PSRGLR GDP
Sbjct: 544  KAYDRIAWNFLREVLTRLGFHGIWISWIMECVSTVSYSFLINGGPQGRVLPSRGLRQGDP 365

Query: 923  LSPYLFVLCVERLTISIQDAVDQNQGELVRISRDGSPISHLFFADDVLLLAKAKVSQVRK 982
            LSPYLF+LC E L+   Q A+ +     V+++R+  PI+HL FADD +   K+  S    
Sbjct: 364  LSPYLFILCTEVLSGLCQQALRKGTLPGVKVARNCPPINHLLFADDTMFFGKSNASSCAI 185

Query: 983  VQNILADFCMASGLNVNIAKS 1003
            + +I+  +  ASG  +N  KS
Sbjct: 184  LLSIMDKYRAASGRCIN*TKS 122


>BG585866 
          Length = 828

 Score =  136 bits (343), Expect = 6e-32
 Identities = 65/210 (30%), Positives = 112/210 (52%), Gaps = 1/210 (0%)
 Frame = +3

Query: 1193 VMKTRDIIQDGFTWRIGRGDLSFWFSKCHGSKALCEKVPYVHISDTALRVRDVFQDGVCD 1252
            +++ +++++ G+TWR G G+ SFW++       L  + P+V I D  L V+DVF  G   
Sbjct: 84   IIRDKNVLKSGYTWRAGSGNSSFWYTNWSSLGLLGTQAPFVDIHDLHLTVKDVFTTGGQH 263

Query: 1253 IRGLSTPITPELWALLQNLFVYVSLDDEDLVVWAPSLEGKYSVQSCYRWLLDM-EGGTAV 1311
             + L T +  ++  ++ N  +  +    D  +W  +  G Y+ +S Y W+L   E     
Sbjct: 264  TQSLYTILPTDIAEVINNTHLNFNASIGDAYIWPHNSNGVYTAKSGYSWILSQTETVNYN 443

Query: 1312 SVDWA*LWKFQVPEKMKLFAWQAAHRSLPTVDTFHDRGVAIPRWCSLCHHHVET*MHCLR 1371
            +  W+ +W+ ++PEK K F W A H ++PT+   + R +     CS C  H E+  HC+R
Sbjct: 444  NSSWSWIWRLKIPEKYKFFLWLACHNAVPTLSLLNHRNMVNSAICSRCGEHEESFFHCVR 623

Query: 1372 DCDASLQVWQNLCVSLTPGFFTASSFLDWI 1401
            DC  S  +W  +  S +P FF++SS  DW+
Sbjct: 624  DCRFSKIIWHKIGFS-SPDFFSSSSVQDWL 710


>BG647708 weakly similar to GP|13786450|gb| putative reverse transcriptase
            {Oryza sativa}, partial (9%)
          Length = 708

 Score = 77.0 bits (188), Expect = 5e-14
 Identities = 44/122 (36%), Positives = 67/122 (54%), Gaps = 4/122 (3%)
 Frame = +1

Query: 913  PSRGLR*GDPLSPYLFVLCVERLTISIQDAVDQNQGELVRISRDGSPISHLFFADDVLLL 972
            P +GLR GDPLSPYLF+LC   L+  ++   ++     ++++R    I+HL FADD LL 
Sbjct: 4    PEKGLRQGDPLSPYLFILCANVLSGLLKREGNKQNLHGIQVARSDPKITHLLFADDSLLF 183

Query: 973  AKAKVSQVRKVQNILADFCMASGLNVNIAKSRDFSSVSVPRAKK----ADIFVVTSIPFT 1028
            A+A +++   +  +L  +  ASG  VN  KS    S +VP  +K      I + T  P +
Sbjct: 184  ARANLTEAATIMQVLHSYQSASGQLVNFEKSEVSYSQNVPNQEKEMICQQIAIKTGSPQS 363

Query: 1029 AN 1030
             N
Sbjct: 364  VN 369


>BE248682 similar to GP|18568269|gb putative gag-pol polyprotein {Zea mays},
            partial (1%)
          Length = 441

 Score = 72.8 bits (177), Expect = 1e-12
 Identities = 50/133 (37%), Positives = 76/133 (56%), Gaps = 5/133 (3%)
 Frame = +3

Query: 911  IAPSRGLR*GDPLSPYLFVLCVERLTISIQDAVDQNQGELVRISRDGSPISHLFFADDVL 970
            I+  RGL+ GDPL+P+LF+L  E ++  +++AV++N  +   + R G+ +SHL +ADD L
Sbjct: 12   ISVQRGLKQGDPLAPFLFLLVAEGISGLMKNAVNRNLFQGFDVKRGGTRVSHLQYADDTL 191

Query: 971  LLAKAKVSQVRKVQNILADFCMASGLNVNIAKSRDFSSVSVPR--AKKADIFV---VTSI 1025
             +    V  +  ++ +L  F MASGL VN  KS     ++VPR   + A  F+     SI
Sbjct: 192  CIGMPTVDNLWTLKALLQGFEMASGLKVNFHKS-SLIGINVPRDFMEAACRFLNCREESI 368

Query: 1026 PFTANLERYLGFP 1038
            PF      YLG P
Sbjct: 369  PFI-----YLGLP 392


>BQ148771 
          Length = 680

 Score = 69.3 bits (168), Expect = 1e-11
 Identities = 45/162 (27%), Positives = 77/162 (46%), Gaps = 10/162 (6%)
 Frame = -3

Query: 1055 RVNRKFASWKGRLLNKAGKFILFKLVLNAIPVYPMQLFWFH*AVCDHLDSLAKNFIWSRG 1114
            +V+   A+WK   L+ A +  L K V+ A+P+YPM       A  + +  L + F+W   
Sbjct: 588  QVHVMLANWKANHLSLARRVTLAKSVIEAVPLYPMMTTIIPKACIEEIQKLQRKFVWGDT 409

Query: 1115 E-RRGMNMVAWRTVTLPKCNGGLGIRKARLINTSMLGKLVWDLVNSHDKLWV*VLLDLYC 1173
            E  R  + V W T++ PK   GLG+R+  ++N + + KL W + +  + L   V+   Y 
Sbjct: 408  EVSRRYHAVGWETMSKPKTIYGLGLRRLDVMNKACIMKLGWSIYSGSNSLCTEVMRGKYQ 229

Query: 1174 TNSD----FLHAPRRRGSCVWNAVMK-----TRDIIQDGFTW 1206
             +      FL  P    S +W A++K      R+++     W
Sbjct: 228  RSESLEEIFLEKP--TDSSLWKALVKLWPEIERNLVDSNGNW 109


>BG456581 
          Length = 683

 Score = 61.6 bits (148), Expect = 2e-09
 Identities = 38/119 (31%), Positives = 52/119 (42%), Gaps = 1/119 (0%)
 Frame = +2

Query: 1290 EGKYSVQSCYRWLLDMEGGTAVSVDWA*-LWKFQVPEKMKLFAWQAAHRSLPTVDTFHDR 1348
            +GK +++  Y +L            WA  +W   +P       W+ AH  LPT D    R
Sbjct: 5    QGKLTIKLVYSFLTSHTS----CAPWASTIWNSCIPPSHSFICWRLAHDRLPTDDNLSSR 172

Query: 1349 GVAIPRWCSLCHHHVET*MHCLRDCDASLQVWQNLCVSLTPGFFTASSFLDWIASVPRH 1407
            G A+   CS C   VET  H    C   + +W  LC  L  G    SSF   ++S+PRH
Sbjct: 173  GCALVSMCSFCLEQVETSDHLFLRCKFVVTLWSWLCSQLRVG-LDFSSFKALLSSLPRH 346


>TC83437 weakly similar to PIR|D86384|D86384 unknown protein [imported] -
            Arabidopsis thaliana, partial (6%)
          Length = 951

 Score = 60.1 bits (144), Expect = 7e-09
 Identities = 39/134 (29%), Positives = 64/134 (47%), Gaps = 4/134 (2%)
 Frame = +2

Query: 960  ISHLFFADDVLLLAKAKVSQVRKVQNILADFCMASGLNVNIAKSR----DFSSVSVPRAK 1015
            +SHL FA+D LLL     + +R ++  L  F   SGL VN  KS     + +   +  A 
Sbjct: 542  VSHLQFANDTLLLETKNWANIRALRAALVIF*AMSGLKVNFHKSGLVCVNIAPSWLSEAA 721

Query: 1016 KADIFVVTSIPFTANLERYLGFPIFQGRQTQEHFDFVLDRVNRKFASWKGRLLNKAGKFI 1075
                + V  +PF      YLG PI    +    ++ +++R+  +   W  R L+  G+ +
Sbjct: 722  SVLSWKVGKVPFL-----YLGMPIEGNSRRLSFWEPIVNRIKARLTGWNSRFLSFGGRLV 886

Query: 1076 LFKLVLNAIPVYPM 1089
            L K VL ++ VY +
Sbjct: 887  LLKSVLTSLSVYAL 928



 Score = 28.5 bits (62), Expect(2) = 1.8
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = +1

Query: 855 VVFKLDLEKACGSVSWAFLRDTL 877
           ++FK+D EKA  SV WA+L   L
Sbjct: 304 LLFKVDFEKAYHSVDWAYLDSVL 372



 Score = 21.9 bits (45), Expect(2) = 1.8
 Identities = 12/26 (46%), Positives = 13/26 (49%)
 Frame = +3

Query: 877 LCFFGFPPTSVSLIMFCVSSSSLSLL 902
           L  FGF   SV L  FC  S   S+L
Sbjct: 348 LGLFGFCSRSVCLFWFCGESGLKSVL 425


>BG647160 homologue to GP|15004435|gb| maturase {Ionopsis satyrioides}, partial
            (2%)
          Length = 780

 Score = 59.7 bits (143), Expect = 9e-09
 Identities = 33/102 (32%), Positives = 60/102 (58%), Gaps = 1/102 (0%)
 Frame = +1

Query: 1467 GGVVRDAVGCWLFGYSGFIGMAE-ILKAELLAVLFGLQSCWDRGFRQLVVSSDSMVVLSL 1525
            GGV+R+ +  ++ G+SGFI + + I+ AEL  +   L+        ++V  SDS++ ++L
Sbjct: 379  GGVIRNYLSTYITGFSGFISIYQNIMFAELTTLHQSLKLAISLNIEEMVCYSDSLLTVNL 558

Query: 1526 LRHGVTRFHVYAAIVGAIRELLRRDWRVELKHMLREGNVVAD 1567
            ++  +++ HVYA ++  I+ ++       L H LREGN  AD
Sbjct: 559  IKEDISQHHVYAVLIHNIKYIM-SSRNFTLHHTLREGNQCAD 681


>BF650289 weakly similar to GP|9049283|dbj| orf129a {Beta vulgaris}, partial
           (69%)
          Length = 616

 Score = 58.5 bits (140), Expect = 2e-08
 Identities = 31/103 (30%), Positives = 57/103 (55%)
 Frame = +3

Query: 803 TKVMVNRLRQFLQELIGPLQSSFIPGRGTIDNAIILQKIVHHMNSRRGKCQNVVFKLDLE 862
           +K++ +R++  L  ++   QS+F+ GR   DN I+  ++V    SR+G     + K+DL 
Sbjct: 294 SKILTSRMQGVLNSVVSENQSAFVKGRVIFDNIILSHELVKSY-SRKGISPRCMVKIDLX 470

Query: 863 KACGSVSWAFLRDTLCFFGFPPTSVSLIMFCVSSSSLSLLWNG 905
           KA  S  W F++  +   GFP   V+ +M  ++++S +   NG
Sbjct: 471 KAYDSXEWPFIKHLMLELGFPYKFVNWVMAXLTTASYTFNXNG 599


>BG586862 
          Length = 804

 Score = 57.0 bits (136), Expect = 6e-08
 Identities = 34/142 (23%), Positives = 59/142 (40%), Gaps = 4/142 (2%)
 Frame = -1

Query: 1318 LWKFQVPEKMKLFAWQAAHRSLPTVDTFHDRGVAIPRWCSLCHHHVET*MHCLRDCDASL 1377
            +W  +   + K F W+  H +LP  D  H RG+     C  C   +ET  H   +C+ + 
Sbjct: 654  VWGIKTIPRHKSFLWRLLHNALPVKDELHKRGIRCSLLCPRCESKIETVQHLFLNCEVTQ 475

Query: 1378 QVWQNLCVSLTPGFFTASSFLDWIAS-VPRHD---VAGLLVHAWFIWCRRRRFVFAGELE 1433
            + W    + +         F DWI + + ++D   +  L    + IW  R + VF     
Sbjct: 474  KEWFGSQLGINFHSSGVLHFHDWITNFILKNDEETIIALTALLYSIWHARNQKVFENIDV 295

Query: 1434 PWRLILHRAADVLRCLRATSPS 1455
            P  +++ RA+  L   +    S
Sbjct: 294  PGDVVIQRASSSLHSFKMAQVS 229


>TC83226 weakly similar to PIR|G86419|G86419 probable reverse transcriptase
            100033-105622 [imported] - Arabidopsis thaliana, partial
            (2%)
          Length = 885

 Score = 56.6 bits (135), Expect = 7e-08
 Identities = 33/113 (29%), Positives = 47/113 (41%), Gaps = 10/113 (8%)
 Frame = +3

Query: 1284 VWAPSLEGKYSVQSCYR----WLLDMEGGTAVSVD----WA*LWKFQVPEKMKLFAWQAA 1335
            +W  +  G YSV+S Y     W       T+ S D    W  +W      + K+  W+  
Sbjct: 3    MWMHNPTGIYSVKSGYNTLRTWQTQQINNTSTSSDETLIWKKIWSLHTIPRHKVLLWRIL 182

Query: 1336 HRSLPTVDTFHDRGVAIPRWCSLCHHHVET*MHCLRDCDASLQVW--QNLCVS 1386
            + SLP   +   RG+     C  CH   ET  H    C  S +VW   NLC++
Sbjct: 183  NDSLPVRSSLRKRGIQCYPLCPRCHSKTETITHLFMSCPLSKRVWFGSNLCIN 341


>TC91765 weakly similar to GP|19881779|gb|AAM01180.1 Putative retroelement
           {Oryza sativa (japonica cultivar-group)}, partial (1%)
          Length = 625

 Score = 55.8 bits (133), Expect = 1e-07
 Identities = 29/69 (42%), Positives = 40/69 (57%)
 Frame = +2

Query: 893 CVSSSSLSLLWNGVKLPPIAPSRGLR*GDPLSPYLFVLCVERLTISIQDAVDQNQGELVR 952
           CV S+   +L N   + PI PSRGL+ GD LSPY+F++CVE L+  I  A ++       
Sbjct: 104 CVESNDYYVLVNNDAVDPIIPSRGLQQGDHLSPYIFIICVEGLSFLIPHAKERGDTHGTS 283

Query: 953 ISRDGSPIS 961
           I R   P+S
Sbjct: 284 I*RGAPPVS 310



 Score = 33.5 bits (75), Expect = 0.67
 Identities = 27/105 (25%), Positives = 44/105 (41%)
 Frame = +3

Query: 955  RDGSPISHLFFADDVLLLAKAKVSQVRKVQNILADFCMASGLNVNIAKSRDFSSVSVPRA 1014
            R G+    L F    L   + +    + ++NIL  +   SG  +++ KS  + S +VP  
Sbjct: 255  RRGAIPMALLFEGAPLRSLRVEEHHAQIMKNILILYEEDSGKAISLRKS*IYCSRNVPDI 434

Query: 1015 KKADIFVVTSIPFTANLERYLGFPIFQGRQTQEHFDFVLDRVNRK 1059
             K  I  +  + F     +YLG P   GR     F  +   V +K
Sbjct: 435  LKTSITYILGVQFMLGTCKYLGLPSMIGRDRTTTFSSIKGGVWQK 569


>BQ122106 similar to GP|9366656|emb|C probable similar to ring-h2 finger
            protein rha1a. {Trypanosoma brucei}, partial (18%)
          Length = 693

 Score = 54.7 bits (130), Expect = 3e-07
 Identities = 35/101 (34%), Positives = 55/101 (53%), Gaps = 1/101 (0%)
 Frame = -2

Query: 1468 GVVRDAVGCWLFGYSGFI-GMAEILKAELLAVLFGLQSCWDRGFRQLVVSSDSMVVLSLL 1526
            G++R+  G +  G+ G I   ++IL AEL A+  GL+   D G    V   DS+  +SL+
Sbjct: 488  GLIRNIAGLFNSGFPGNITNTSDILLAELHAIFQGLRMISDMGISDFVCYFDSLHYVSLI 309

Query: 1527 RHGVTRFHVYAAIVGAIRELLRRDWRVELKHMLREGNVVAD 1567
                 +FHVYA ++  I++L+    +  + H L EGN  AD
Sbjct: 308  NGPSMKFHVYATLIQDIKDLVITS-KASVFHTLCEGNYCAD 189


>BG585499 
          Length = 792

 Score = 52.4 bits (124), Expect = 1e-06
 Identities = 37/147 (25%), Positives = 60/147 (40%), Gaps = 10/147 (6%)
 Frame = +3

Query: 1292 KYSVQSCYRWLLDMEGGTAVSVDWA*LWKFQVPEKMKLFAWQAAHRSLPTVDTFHDRGVA 1351
            ++ ++S Y  L+  +  + V  DW  LW ++ P + + F W  AH  + T       G  
Sbjct: 162  QFKIKSSYNLLV*DQ--SIVDCDWKMLWGWRGPHRTQTFMWLVAHGCILTNYRRSRWGTR 335

Query: 1352 IPRWCSLCHHHVET*MHCLRDCDASLQVWQNLCVS-LTPGFFTASSFLDWIASVPRHDVA 1410
            +   C  C +  ET +H L DC  + QVW  L  S     FF+     DW+         
Sbjct: 336  VLATCPCCGNADETVLHVLCDCRPASQVWIRLVPSDWITNFFSFDDCRDWVFKNLSKRSN 515

Query: 1411 GL---------LVHAWFIWCRRRRFVF 1428
            G+         +   W +W  R + +F
Sbjct: 516  GVSKFKWQPTFMTTCWHMWTWRNKAIF 596


>TC77455 similar to GP|22335695|dbj|BAC10549. nine-cis-epoxycarotenoid
            dioxygenase1 {Pisum sativum}, partial (43%)
          Length = 1865

 Score = 51.2 bits (121), Expect = 3e-06
 Identities = 22/44 (50%), Positives = 28/44 (63%)
 Frame = -3

Query: 1129 LPKCNGGLGIRKARLINTSMLGKLVWDLVNSHDKLWV*VLLDLY 1172
            LP+C GGLG+R  RL+N S+L K  W L+     LW  VL D+Y
Sbjct: 966  LPRCKGGLGVRDIRLVNVSLLAKWWWRLLQDQSSLWKEVLEDIY 835



 Score = 45.1 bits (105), Expect = 2e-04
 Identities = 33/107 (30%), Positives = 45/107 (41%), Gaps = 8/107 (7%)
 Frame = -2

Query: 1281 DLVVWAPSLEGKYSVQSCY-----RWLLDMEGGTAVSVDWA*LWKFQVPEKMKLFAWQAA 1335
            D+ VW P  EG +SV SCY       LL+        V +  LWK + P K+  F+W   
Sbjct: 448  DIWVWKPDKEGVFSVNSCYFLLQNLRLLEDRLSYEEEVIFRELWKSKAPAKVLAFSWTLF 269

Query: 1336 HRSLPTVDTFHDR---GVAIPRWCSLCHHHVET*MHCLRDCDASLQV 1379
               +PT+     R    V   + C  C    ET +H    CD   +V
Sbjct: 268  LDRIPTMVNLGKRRLLRVEDSKRCVFCGCQDETVVHLFLHCDVISKV 128


>TC83398 similar to PIR|T05150|T05150 hypothetical protein F18E5.40 -
            Arabidopsis thaliana, partial (6%)
          Length = 766

 Score = 49.7 bits (117), Expect = 9e-06
 Identities = 33/89 (37%), Positives = 49/89 (54%), Gaps = 1/89 (1%)
 Frame = +2

Query: 1480 GYSGFIGMA-EILKAELLAVLFGLQSCWDRGFRQLVVSSDSMVVLSLLRHGVTRFHVYAA 1538
            G+SG I  + +IL AEL A+L GLQ         +V  SDS+  ++L+      +H YA 
Sbjct: 104  GFSGHIDHSNDILFAELHAILMGLQLAQTLNIVDVVCYSDSLHYVNLINGPSVVYHAYAT 283

Query: 1539 IVGAIRELLRRDWRVELKHMLREGNVVAD 1567
            ++  I++L+    R+   H LREGN  AD
Sbjct: 284  LIQDIKDLI----RLSKLHTLREGNRCAD 358


>BG587113 weakly similar to PIR|A84888|A8 hypothetical protein At2g45230
            [imported] - Arabidopsis thaliana, partial (10%)
          Length = 767

 Score = 47.4 bits (111), Expect = 4e-05
 Identities = 34/119 (28%), Positives = 50/119 (41%), Gaps = 9/119 (7%)
 Frame = -3

Query: 1280 EDLVVWAPSLEGKYSVQSCYRWLLDM-----EGGTA--VSVD--WA*LWKFQVPEKMKLF 1330
            ED   W  S  G YSV+S Y    ++     + GT    S+D  +  +WK+    K++ F
Sbjct: 429  EDSYSWEYSKSGHYSVKSGYYVQTNIIAAANQRGTVDQPSLDDLYQRVWKYNTSPKVRHF 250

Query: 1331 AWQAAHRSLPTVDTFHDRGVAIPRWCSLCHHHVET*MHCLRDCDASLQVWQNLCVSLTP 1389
             W+    SLPT      R ++    CS C    ET  H L  C  +  +W    +   P
Sbjct: 249  LWRCISNSLPTAANMRSRHISKDGSCSRCGMESETVNHILFQCPYARLIWATSPIHAPP 73


>BG447966 weakly similar to PIR|G96509|G96 protein F27F5.21 [imported] -
           Arabidopsis thaliana, partial (7%)
          Length = 687

 Score = 35.8 bits (81), Expect(2) = 2e-04
 Identities = 17/35 (48%), Positives = 25/35 (70%)
 Frame = +2

Query: 803 TKVMVNRLRQFLQELIGPLQSSFIPGRGTIDNAII 837
           TKV+ NR++Q L ++I   QS+F+ GR   DNA+I
Sbjct: 527 TKVIANRVKQTLPDVIDVEQSAFVQGRLITDNALI 631



 Score = 28.5 bits (62), Expect(2) = 2e-04
 Identities = 23/66 (34%), Positives = 29/66 (43%)
 Frame = +3

Query: 731 RVLMAFNRFSSSSIGILWGMMFGVWFVMLLSRVLLTLSWPRL*FVLSLRLTSPLPSGSSG 790
           RV MA    SS SIGILWG     W     + V    S  +    LSL+    +    + 
Sbjct: 312 RVQMASLHCSSKSIGILWGRKCNKWSSKSSTTVWKLKSLIKPSLSLSLKERIRILQRITA 491

Query: 791 QSAYAM 796
           Q A+AM
Sbjct: 492 QLAFAM 509


>BF006335 similar to GP|14334538|gb| unknown protein {Arabidopsis thaliana},
            partial (3%)
          Length = 505

 Score = 40.0 bits (92), Expect(2) = 8e-04
 Identities = 26/80 (32%), Positives = 41/80 (50%)
 Frame = +2

Query: 1467 GGVVRDAVGCWLFGYSGFIGMAEILKAELLAVLFGLQSCWDRGFRQLVVSSDSMVVLSLL 1526
            GG+ R+    + FG+ G IG + IL AE+  +L GL+  W    R+ +   DS+ V+ L 
Sbjct: 215  GGLDRNYDKAFQFGFYGSIGWSNILHAEIQDLLVGLKLWWKA--RKFICYYDSLHVVQLG 388

Query: 1527 RHGVTRFHVYAAIVGAIREL 1546
                  FH YA ++   + L
Sbjct: 389  SMNTHHFHHYANMLEIYQSL 448



 Score = 22.3 bits (46), Expect(2) = 8e-04
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +3

Query: 1543 IRELLRRDWRVELKHMLREGN 1563
            IR  +++DW   L     EGN
Sbjct: 438  IRAYMKKDWNFSLHQTFPEGN 500


>TC93101 
          Length = 675

 Score = 43.1 bits (100), Expect = 8e-04
 Identities = 23/100 (23%), Positives = 44/100 (44%), Gaps = 4/100 (4%)
 Frame = -1

Query: 1336 HRSLPTVDTFHDRGVAIPRWCSLCHHHVET*MHCLRDCDASLQVWQNLCVSLTPGFFTAS 1395
            H +LP     + RGV  P  C  C+ ++ET  H    C+ + +VW    +S+     +  
Sbjct: 672  HTTLPVRXELNKRGVNCPPLCPRCYFNLETTNHIFMSCERTQRVWFGSQLSIRFPDNSTI 493

Query: 1396 SFLDWIASVPRHDVAGLLVH----AWFIWCRRRRFVFAGE 1431
            +F DW+     +    +++      + IW  R + +F  +
Sbjct: 492  NFSDWLFDAISNQTEEIIIKISAITYSIWHARNKAIFENQ 373


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.338    0.147    0.507 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,225,199
Number of Sequences: 36976
Number of extensions: 1042909
Number of successful extensions: 7623
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 4272
Number of HSP's successfully gapped in prelim test: 357
Number of HSP's that attempted gapping in prelim test: 3143
Number of HSP's gapped (non-prelim): 5022
length of query: 1569
length of database: 9,014,727
effective HSP length: 109
effective length of query: 1460
effective length of database: 4,984,343
effective search space: 7277140780
effective search space used: 7277140780
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 15 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.8 bits)
S2: 65 (29.6 bits)