BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0022.17
(341 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC78980 myb-related transcription factor [Medicago truncatula] 248 e-124
BG644406 homologue to PIR|T07398|T07 myb-related transcription f... 102 2e-22
BF647428 homologue to PIR|T51621|T51 myb-like protein [imported]... 102 2e-22
BQ147546 similar to PIR|H96706|H96 probable transcription factor... 102 3e-22
TC90505 similar to GP|3941528|gb|AAC83640.1| putative transcript... 96 2e-20
BG448527 similar to PIR|T51509|T51 probable transcription factor... 95 4e-20
TC78266 similar to GP|22266673|dbj|BAC07543. myb-related transcr... 94 6e-20
TC78268 weakly similar to PIR|B85064|B85064 MYB-like protein [im... 94 6e-20
BF644787 similar to GP|11994692|db MYB-like DNA-binding domain p... 94 8e-20
TC78267 weakly similar to PIR|B85064|B85064 MYB-like protein [im... 93 1e-19
TC80618 homologue to PIR|T06455|T06455 Myb26 protein - garden pe... 92 3e-19
BF645233 similar to PIR|T03762|T03 myb-related transcription fac... 92 4e-19
TC90951 homologue to PIR|T06455|T06455 Myb26 protein - garden pe... 91 5e-19
BE203720 similar to PIR|T51666|T51 myb-related transcription fac... 91 8e-19
TC81976 homologue to PIR|T09737|T09737 dehydration-induced myb-r... 90 1e-18
TC89016 similar to GP|19073328|gb|AAL84762.1 typical P-type R2R3... 90 1e-18
TC78274 homologue to PIR|T49254|T49254 Myb DNA binding protein-l... 84 1e-18
TC89397 homologue to GP|2832408|emb|CAA74605.1 R2R3-MYB transcri... 89 2e-18
BF635572 similar to GP|7673084|gb| An2 protein {Petunia x hybrid... 89 2e-18
TC93831 similar to PIR|T09735|T09735 ABA-induced myb-related pro... 88 5e-18
>TC78980 myb-related transcription factor [Medicago truncatula]
Length = 1526
Score = 248 bits (634), Expect(2) = e-124
Identities = 142/225 (63%), Positives = 169/225 (75%), Gaps = 12/225 (5%)
Frame = +2
Query: 122 SDTKYEHMLEGFAEKLVKEHTLPSFAMAASSNEAFLHTNSSA----MLPSWLSNYDSTS- 176
+D+KYEH+LE FAEKLVKE PSF MAAS N ++LHT++ A +LPSWLSN ++ +
Sbjct: 560 NDSKYEHILESFAEKLVKERPSPSFVMAAS-NSSYLHTDAQAPTPGLLPSWLSNSNNAAP 736
Query: 177 TPPSSISVTLSLSPSTVATP-------RGLENNAPFVLRNVTAHNGSVPSFSDHILMSEL 229
P+S SVTLSLSPSTVA P RG +NAP VL NV H G+V S+ + ++MSEL
Sbjct: 737 VRPNSPSVTLSLSPSTVAAPPPWMQPVRG-PDNAPLVLGNVAPH-GAVLSYGESMVMSEL 910
Query: 230 VGFSKELEEGHRALAAHKKEAEWRLRRLELQLESEKACRRRETVEEFEANIKALQEEQTA 289
V KELEE H ALAAHKKEA WRL R+ELQLESEKA RRRE +EE EA IKAL+EEQ
Sbjct: 911 VDCCKELEEVHHALAAHKKEAAWRLSRVELQLESEKASRRREKMEEIEAKIKALREEQAV 1090
Query: 290 ALNRIENACREQLGGLRRDAESKEQKLAEKWTSKHLRLTRLLEQM 334
AL+RIE REQL GLRRDAE+KEQKL E+W +KHLRLT+ LEQ+
Sbjct: 1091ALDRIEGEYREQLAGLRRDAETKEQKLTEQWAAKHLRLTKFLEQV 1225
Score = 214 bits (546), Expect(2) = e-124
Identities = 103/121 (85%), Positives = 110/121 (90%), Gaps = 1/121 (0%)
Frame = +3
Query: 1 MKERQRWSSEEDALLHAYVQQYGPREWNLVSQRMNTPLNRDTKSCLERWKNYLKPGIKKG 60
MK+RQRW +EEDALL AYV+QYGPREWNLVSQRMNTPLNRD KSCLERWKNYLKPGIKKG
Sbjct: 192 MKDRQRWRAEEDALLRAYVKQYGPREWNLVSQRMNTPLNRDAKSCLERWKNYLKPGIKKG 371
Query: 61 SLTKEEQRLVILLQANYGNKWKKIAAEVPGRTAKRLGKWWEVYKEKQQRE-KIEINGIVS 119
SLT+EEQRLVI LQA +GNKWKKIAA+VPGRTAKRLGKWWEV+KEKQQRE K IN V
Sbjct: 372 SLTEEEQRLVISLQATHGNKWKKIAAQVPGRTAKRLGKWWEVFKEKQQRETKGSINRTVD 551
Query: 120 P 120
P
Sbjct: 552 P 554
>BG644406 homologue to PIR|T07398|T07 myb-related transcription factor THM6 -
tomato, partial (42%)
Length = 762
Score = 102 bits (255), Expect = 2e-22
Identities = 49/113 (43%), Positives = 75/113 (66%)
Frame = +1
Query: 7 WSSEEDALLHAYVQQYGPREWNLVSQRMNTPLNRDTKSCLERWKNYLKPGIKKGSLTKEE 66
W+ EED +L ++VQ++GP W V +T L R +KSC RW NYL+PGIK+GS T +E
Sbjct: 193 WTPEEDIMLVSFVQEHGPGNWRTVPT--HTGLRRCSKSCRLRWTNYLRPGIKRGSFTDQE 366
Query: 67 QRLVILLQANYGNKWKKIAAEVPGRTAKRLGKWWEVYKEKQQREKIEINGIVS 119
++++I LQA GNKW IA+ +P RT + +W + +K+ + K+E +G+ S
Sbjct: 367 EKMIIQLQALLGNKWAAIASYLPERTDNDIKNYWNTHLKKKLK-KLETSGLYS 522
>BF647428 homologue to PIR|T51621|T51 myb-like protein [imported] -
Arabidopsis thaliana, partial (44%)
Length = 689
Score = 102 bits (254), Expect = 2e-22
Identities = 57/161 (35%), Positives = 92/161 (56%), Gaps = 15/161 (9%)
Frame = +2
Query: 7 WSSEEDALLHAYVQQYGPREWNLVSQRMNTPLNRDTKSCLERWKNYLKPGIKKGSLTKEE 66
W+ EED +L +Y+Q++GP W V NT L R +KSC RW NYL+PGIK+G+ T +E
Sbjct: 140 WTPEEDIILVSYIQEHGPGNWKAVPT--NTGLLRCSKSCRLRWTNYLRPGIKRGNFTDQE 313
Query: 67 QRLVILLQANYGNKWKKIAAEVPGRTAKRLGKWWEVYKEKQQREKIEIN----------- 115
++++I LQA GN+W IAA +P RT + +W Y +K+ + K+E +
Sbjct: 314 EKMIIHLQALLGNRWAAIAAYLPQRTDNDIKNYWNTYLKKKLK-KLETSTSSESCLGHDE 490
Query: 116 -GIVSPISDTKYEHMLE---GFAEKLVKEHTLPSFAMAASS 152
+ PI+ ++E L+ A+K + E P + ++S+
Sbjct: 491 FSVSQPIARGQWERRLQTDIHMAKKALSEALQPEKSTSSSN 613
>BQ147546 similar to PIR|H96706|H96 probable transcription factor T22E19.5
[imported] - Arabidopsis thaliana, partial (48%)
Length = 690
Score = 102 bits (253), Expect = 3e-22
Identities = 59/178 (33%), Positives = 99/178 (55%)
Frame = +3
Query: 4 RQRWSSEEDALLHAYVQQYGPREWNLVSQRMNTPLNRDTKSCLERWKNYLKPGIKKGSLT 63
R W+ EED+LL Y+ ++G WN++++ + L R KSC RW NYLKP IK+G+LT
Sbjct: 168 RGPWTLEEDSLLIHYIARHGEGRWNMLAK--SAGLKRTGKSCRLRWLNYLKPDIKRGNLT 341
Query: 64 KEEQRLVILLQANYGNKWKKIAAEVPGRTAKRLGKWWEVYKEKQQREKIEINGIVSPISD 123
+EQ L++ L + GN+W KIA +PGRT + +W +KQ R+ + I D
Sbjct: 342 PQEQLLILELHSKXGNRWSKIAQHLPGRTDNEIKNYWRTRVQKQARQ-LNIESGSKRFID 518
Query: 124 TKYEHMLEGFAEKLVKEHTLPSFAMAASSNEAFLHTNSSAMLPSWLSNYDSTSTPPSS 181
+ +K+ +++T PSF ++S ++ +++ S ++++ S PSS
Sbjct: 519 AVKCFWMPRLLQKM-EQNTSPSFDNSSSMTN--MNNFGNSIEASTSNSFNIPSMSPSS 683
>TC90505 similar to GP|3941528|gb|AAC83640.1| putative transcription factor
{Arabidopsis thaliana}, partial (49%)
Length = 984
Score = 96.3 bits (238), Expect = 2e-20
Identities = 42/104 (40%), Positives = 69/104 (65%)
Frame = +1
Query: 7 WSSEEDALLHAYVQQYGPREWNLVSQRMNTPLNRDTKSCLERWKNYLKPGIKKGSLTKEE 66
W+ EED +L Y+Q++GP W V + T L+R +KSC RW NYL+PGIK+G+ T++E
Sbjct: 205 WTPEEDIILVTYIQEHGPGNWRAVPTK--TGLSRCSKSCRLRWTNYLRPGIKRGNFTEQE 378
Query: 67 QRLVILLQANYGNKWKKIAAEVPGRTAKRLGKWWEVYKEKQQRE 110
++++I LQ GN+W IA+ +P RT + +W + +K+ ++
Sbjct: 379 EKMIIHLQDLLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLKK 510
>BG448527 similar to PIR|T51509|T51 probable transcription factor (MYB9) -
Arabidopsis thaliana, partial (40%)
Length = 633
Score = 94.7 bits (234), Expect = 4e-20
Identities = 45/101 (44%), Positives = 61/101 (59%)
Frame = +1
Query: 7 WSSEEDALLHAYVQQYGPREWNLVSQRMNTPLNRDTKSCLERWKNYLKPGIKKGSLTKEE 66
W+ EED L Y+ ++G W +S+R LNR KSC RW NYL+P IK+G T EE
Sbjct: 88 WTQEEDEKLIDYINKHGHGNWGTLSKRAG--LNRCGKSCRLRWTNYLRPDIKRGKFTDEE 261
Query: 67 QRLVILLQANYGNKWKKIAAEVPGRTAKRLGKWWEVYKEKQ 107
+R++I L + GNKW KIAA +PGRT + +W K+
Sbjct: 262 ERVIINLHSVLGNKWSKIAAHLPGRTDNEIKNYWNTNIRKK 384
>TC78266 similar to GP|22266673|dbj|BAC07543. myb-related transcription
factor VlMYBB1-1 {Vitis labrusca x Vitis vinifera},
partial (46%)
Length = 665
Score = 94.4 bits (233), Expect = 6e-20
Identities = 50/119 (42%), Positives = 72/119 (60%)
Frame = +1
Query: 7 WSSEEDALLHAYVQQYGPREWNLVSQRMNTPLNRDTKSCLERWKNYLKPGIKKGSLTKEE 66
W++EED L AYV +YG W + + L+R KSC RW NYL+P IK+G+ T+EE
Sbjct: 136 WTAEEDRKLIAYVTRYGCWNWRQLPKFAG--LSRCGKSCRLRWLNYLRPNIKRGNFTQEE 309
Query: 67 QRLVILLQANYGNKWKKIAAEVPGRTAKRLGKWWEVYKEKQQREKIEINGIVSPISDTK 125
+ L+I + N GN+W IAAE+PGRT + +W +K ++E N I + I +TK
Sbjct: 310 EELIIRMHKNLGNRWSTIAAELPGRTDNEVKNYWHTSLKK----RVEHNQITN-IEETK 471
>TC78268 weakly similar to PIR|B85064|B85064 MYB-like protein [imported] -
Arabidopsis thaliana, partial (35%)
Length = 888
Score = 94.4 bits (233), Expect = 6e-20
Identities = 59/172 (34%), Positives = 91/172 (52%), Gaps = 2/172 (1%)
Frame = +1
Query: 7 WSSEEDALLHAYVQQYGPREWNLVSQRMNTPLNRDTKSCLERWKNYLKPGIKKGSLTKEE 66
W++EED L AYV +YG W + + L+R KSC RW NYL+P IK+G+ T+EE
Sbjct: 133 WTAEEDRKLIAYVTRYGCWNWRQLPKFAG--LSRCGKSCRLRWLNYLRPNIKRGNFTQEE 306
Query: 67 QRLVILLQANYGNKWKKIAAEVPGRTAKRLGKWWEVYKEKQQREKIEINGIVSPISDTKY 126
+ L+I + GN+W IAAE+PGRT + W +K+ + I N +TK
Sbjct: 307 EELIIRMHKKLGNRWSTIAAELPGRTDNEVKNHWHTSLKKRAIDNIVTN------EETK- 465
Query: 127 EHMLEGFAEKLVKEH--TLPSFAMAASSNEAFLHTNSSAMLPSWLSNYDSTS 176
+ V + TLP+ + + +N +SS+ L S S+++ST+
Sbjct: 466 -----STQGRCVSNYQITLPANSQISDTNGPLSPFSSSSELSSTSSDHNSTA 606
>BF644787 similar to GP|11994692|db MYB-like DNA-binding domain protein
{Arabidopsis thaliana}, partial (53%)
Length = 682
Score = 94.0 bits (232), Expect = 8e-20
Identities = 41/107 (38%), Positives = 67/107 (62%)
Frame = +3
Query: 7 WSSEEDALLHAYVQQYGPREWNLVSQRMNTPLNRDTKSCLERWKNYLKPGIKKGSLTKEE 66
W++EED LL YV+ +G WN V++ T L R+ KSC RW NYL+P +K+G +T +E
Sbjct: 243 WTAEEDRLLIDYVRLHGEGRWNSVARL--TGLKRNGKSCRLRWVNYLRPDLKRGQITPQE 416
Query: 67 QRLVILLQANYGNKWKKIAAEVPGRTAKRLGKWWEVYKEKQQREKIE 113
+ +++ L A +GN+W IA +PGRT + +W + +K+ + +
Sbjct: 417 ESIILELHARWGNRWSTIARSLPGRTDNEIKNYWRTHFKKKAKNPFD 557
>TC78267 weakly similar to PIR|B85064|B85064 MYB-like protein [imported] -
Arabidopsis thaliana, partial (35%)
Length = 869
Score = 93.2 bits (230), Expect = 1e-19
Identities = 55/167 (32%), Positives = 88/167 (51%), Gaps = 2/167 (1%)
Frame = +2
Query: 7 WSSEEDALLHAYVQQYGPREWNLVSQRMNTPLNRDTKSCLERWKNYLKPGIKKGSLTKEE 66
W++EED L AYV +YG W + + L+R KSC RW NYL+P I++G+ TK+E
Sbjct: 143 WTAEEDRKLIAYVTRYGFWNWRQLPKFAG--LSRCGKSCRLRWLNYLRPNIRRGNFTKDE 316
Query: 67 QRLVILLQANYGNKWKKIAAEVPGRTAKRLGKWWEVYKEKQQREKIEINGIVSPISDTKY 126
+ L+I + GNKW IAAE+PGRT + W +K+ + I N TK
Sbjct: 317 EELIIRMHKKLGNKWSTIAAELPGRTDNEVKNHWHTSLKKRAIDNIVTN---EETKSTKS 487
Query: 127 EHMLEGFAEKLVKEH--TLPSFAMAASSNEAFLHTNSSAMLPSWLSN 171
+ ++E + + + T P + +++N +SS+ + S S+
Sbjct: 488 KDIIESTQGRDISNYQITPPDSSQISNNNGPLSPFSSSSEISSTSSD 628
>TC80618 homologue to PIR|T06455|T06455 Myb26 protein - garden pea, partial
(57%)
Length = 799
Score = 92.0 bits (227), Expect = 3e-19
Identities = 41/104 (39%), Positives = 64/104 (61%)
Frame = +2
Query: 7 WSSEEDALLHAYVQQYGPREWNLVSQRMNTPLNRDTKSCLERWKNYLKPGIKKGSLTKEE 66
W+ EED +L Y+ +G WN +++ + L R KSC RW NYL+P +++G++T EE
Sbjct: 104 WTMEEDLILINYIANHGEGVWNSLAK--SAGLKRTGKSCRLRWLNYLRPDVRRGNITPEE 277
Query: 67 QRLVILLQANYGNKWKKIAAEVPGRTAKRLGKWWEVYKEKQQRE 110
Q L+I L A +GN+W KIA +PGRT + +W +K ++
Sbjct: 278 QLLIIELHAKWGNRWSKIAKHLPGRTDNEIKNYWRTRIQKHIKQ 409
>BF645233 similar to PIR|T03762|T03 myb-related transcription factor - rice,
partial (20%)
Length = 643
Score = 91.7 bits (226), Expect = 4e-19
Identities = 45/103 (43%), Positives = 65/103 (62%)
Frame = +1
Query: 7 WSSEEDALLHAYVQQYGPREWNLVSQRMNTPLNRDTKSCLERWKNYLKPGIKKGSLTKEE 66
W++ ED +L A+VQ+YG WN V R T L R KSC RW N+L+P ++KG++T EE
Sbjct: 310 WTAAEDEILVAHVQKYGEGNWNSV--RKCTGLARCGKSCRLRWANHLRPDLRKGAITAEE 483
Query: 67 QRLVILLQANYGNKWKKIAAEVPGRTAKRLGKWWEVYKEKQQR 109
+R +I L GNKW ++AA +PGRT + +W +K+ R
Sbjct: 484 ERRIIELHHKMGNKWAQMAALLPGRTDNEIKNFWNTRCKKRGR 612
>TC90951 homologue to PIR|T06455|T06455 Myb26 protein - garden pea, partial
(83%)
Length = 661
Score = 91.3 bits (225), Expect = 5e-19
Identities = 46/134 (34%), Positives = 71/134 (52%), Gaps = 12/134 (8%)
Frame = +3
Query: 7 WSSEEDALLHAYVQQYGPREWNLVSQRMNTPLNRDTKSCLERWKNYLKPGIKKGSLTKEE 66
W+ EED +L Y+ +G WN +++ L R KSC RW NYL+P +++G++T EE
Sbjct: 117 WTMEEDLILINYIANHGEGVWNSLAKAAG--LKRTGKSCRLRWLNYLRPDVRRGNITPEE 290
Query: 67 QRLVILLQANYGNKWKKIAAEVPGRTAKRLGKWWEVYKEKQ------------QREKIEI 114
Q L++ L A +GN+W KIA +PGRT + +W +K Q+ +EI
Sbjct: 291 QLLIMELHAKWGNRWSKIAKHLPGRTDNEIKNFWRTRIQKHIKQVDHPHQNNFQQMSLEI 470
Query: 115 NGIVSPISDTKYEH 128
N S ++H
Sbjct: 471 NDHHQSSSSPSFQH 512
>BE203720 similar to PIR|T51666|T51 myb-related transcription factor MYB59
[imported] - Arabidopsis thaliana, partial (48%)
Length = 514
Score = 90.5 bits (223), Expect = 8e-19
Identities = 48/149 (32%), Positives = 79/149 (52%), Gaps = 1/149 (0%)
Frame = +1
Query: 7 WSSEEDALLHAYVQQYGPREWNLVSQRMNTPLNRDTKSCLERWKNYLKPGIKKGSLTKEE 66
W+ +ED L +V +G R W+ +++ L+R KSC RW NYL P +K+G +T +E
Sbjct: 31 WTEQEDYKLAYFVGLFGDRRWDFIAKVSG--LSRSGKSCRLRWVNYLHPDLKRGKMTPQE 204
Query: 67 QRLVILLQANYGNKWKKIAAEVPGRTAKRLGKWWEVY-KEKQQREKIEINGIVSPISDTK 125
+RLV+ L + +GN+W +IA ++PGRT + +W + ++K+ +EK +S D
Sbjct: 205 ERLVMELHSKWGNRWSRIARKLPGRTDNEIKNYWRTHMRKKRAQEKKHATPSISSSPDQS 384
Query: 126 YEHMLEGFAEKLVKEHTLPSFAMAASSNE 154
F+ H + S A S E
Sbjct: 385 SSCQSSHFSN---SNHGVDSHASNKESEE 462
>TC81976 homologue to PIR|T09737|T09737 dehydration-induced myb-related
protein Cpm7 - Craterostigma plantagineum, partial (42%)
Length = 1201
Score = 90.1 bits (222), Expect = 1e-18
Identities = 41/113 (36%), Positives = 68/113 (59%), Gaps = 1/113 (0%)
Frame = +1
Query: 4 RQRWSSEEDALLHAYVQQYGPREWNLVSQRMNTPLNRDTKSCLERWKNYLKPGIKKGSLT 63
R W+ +ED L Y+ +G WN +++ + L R KSC RW NYL+P +++G++T
Sbjct: 229 RGPWTVDEDLALINYIANHGEGRWNTLAR--SAGLKRTGKSCRLRWLNYLRPDVRRGNIT 402
Query: 64 KEEQRLVILLQANYGNKWKKIAAEVPGRTAKRLGKWWEVYKEKQQRE-KIEIN 115
EEQ L++ L + +GN+W KIA +PGRT + +W +K ++ K ++N
Sbjct: 403 LEEQLLILELHSRWGNRWSKIAQYLPGRTDNEIKNYWRTRVQKHAKQLKCDVN 561
>TC89016 similar to GP|19073328|gb|AAL84762.1 typical P-type R2R3 Myb
protein {Sorghum bicolor}, partial (81%)
Length = 1120
Score = 89.7 bits (221), Expect = 1e-18
Identities = 41/110 (37%), Positives = 67/110 (60%), Gaps = 1/110 (0%)
Frame = +2
Query: 7 WSSEEDALLHAYVQQYGPREWNLVSQRMNTPLNRDTKSCLERWKNYLKPGIKKGSLTKEE 66
W+ EED +L Y+ +G WN ++ + L R KSC RW NYL+P +++G++T +E
Sbjct: 194 WTLEEDTILVDYITIHGEGHWNTLAS--SAGLRRSGKSCRLRWLNYLRPDLRRGNITLQE 367
Query: 67 QRLVILLQANYGNKWKKIAAEVPGRTAKRLGKWWEVYKEKQQRE-KIEIN 115
Q L++ L + +GN+W KIA +PGRT + +W KQ ++ K ++N
Sbjct: 368 QILILDLHSRWGNRWSKIAQHLPGRTDNEIKNYWRTRVIKQAKQLKCDVN 517
>TC78274 homologue to PIR|T49254|T49254 Myb DNA binding protein-like -
Arabidopsis thaliana, partial (46%)
Length = 687
Score = 84.0 bits (206), Expect(2) = 1e-18
Identities = 43/132 (32%), Positives = 69/132 (51%)
Frame = +2
Query: 38 LNRDTKSCLERWKNYLKPGIKKGSLTKEEQRLVILLQANYGNKWKKIAAEVPGRTAKRLG 97
LNR KSC RW NYL PG+K+G +T E+RLV+ LQ+ +GN+W +IA ++PGRT +
Sbjct: 287 LNRTGKSCRLRWVNYLHPGLKRGKMTPHEERLVLELQSKWGNRWSRIARKLPGRTDNEIK 466
Query: 98 KWWEVYKEKQQREKIEINGIVSPISDTKYEHMLEGFAEKLVKEHTLPSFAMAASSNEAFL 157
+W + K+ ++K I T++ H++ A K E + ++ S + L
Sbjct: 467 NYWRTHMRKKAQDKKR-----GSIQSTEH-HVMNSHASKEAGEESFYDTGGSSXSTQVKL 628
Query: 158 HTNSSAMLPSWL 169
W+
Sbjct: 629 XGEEHEKKFQWM 664
Score = 26.2 bits (56), Expect(2) = 1e-18
Identities = 8/26 (30%), Positives = 17/26 (64%)
Frame = +3
Query: 7 WSSEEDALLHAYVQQYGPREWNLVSQ 32
W+ +ED L ++V +G R W+ +++
Sbjct: 93 WTEQEDFKLVSFVGLFGDRRWDFIAK 170
>TC89397 homologue to GP|2832408|emb|CAA74605.1 R2R3-MYB transcription
factor {Arabidopsis thaliana}, partial (40%)
Length = 1063
Score = 89.4 bits (220), Expect = 2e-18
Identities = 58/179 (32%), Positives = 86/179 (47%), Gaps = 1/179 (0%)
Frame = +3
Query: 7 WSSEEDALLHAYVQQYGPR-EWNLVSQRMNTPLNRDTKSCLERWKNYLKPGIKKGSLTKE 65
WS EEDA L +Y++Q G W + Q++ L R KSC RW NYL+P IK G ++E
Sbjct: 87 WSPEEDAKLKSYIEQNGTGGNWIALPQKIG--LKRCGKSCRLRWLNYLRPNIKHGGFSEE 260
Query: 66 EQRLVILLQANYGNKWKKIAAEVPGRTAKRLGKWWEVYKEKQQREKIEINGIVSPISDTK 125
E ++ L + G++W IAA++PGRT + +W +K+ K +S+ K
Sbjct: 261 EDDIICSLYVSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLLGKQRKEQQARRVSNMK 440
Query: 126 YEHMLEGFAEKLVKEHTLPSFAMAASSNEAFLHTNSSAMLPSWLSNYDSTSTPPSSISV 184
E +K T + MAA L NS + P W + Y P S+ S+
Sbjct: 441 QE----------MKRETNQNLMMAA------LGVNSMSSAPYWPAEYSVHPMPVSNSSI 569
>BF635572 similar to GP|7673084|gb| An2 protein {Petunia x hybrida}, partial
(40%)
Length = 367
Score = 89.0 bits (219), Expect = 2e-18
Identities = 44/101 (43%), Positives = 60/101 (58%)
Frame = +2
Query: 7 WSSEEDALLHAYVQQYGPREWNLVSQRMNTPLNRDTKSCLERWKNYLKPGIKKGSLTKEE 66
W+ EED LL A + +YG +W+LV +R T LNR KSC RW NYL P I + S ++E
Sbjct: 11 WTYEEDNLLKACIHKYGEGKWHLVPKR--TGLNRCRKSCRLRWLNYLNPAINRESFAEDE 184
Query: 67 QRLVILLQANYGNKWKKIAAEVPGRTAKRLGKWWEVYKEKQ 107
+++ L GNKW IAA +PGRTA + +W K+
Sbjct: 185 IDMILRLHKLLGNKWSLIAARLPGRTANDVXNYWHTNLRKK 307
>TC93831 similar to PIR|T09735|T09735 ABA-induced myb-related protein Cpm10
- Craterostigma plantagineum, partial (38%)
Length = 500
Score = 87.8 bits (216), Expect = 5e-18
Identities = 39/107 (36%), Positives = 62/107 (57%)
Frame = +1
Query: 4 RQRWSSEEDALLHAYVQQYGPREWNLVSQRMNTPLNRDTKSCLERWKNYLKPGIKKGSLT 63
R W+ +ED L Y+ +G WN ++ + L R KSC RW NYL+P +++G++T
Sbjct: 133 RGPWTVDEDLTLMNYIATHGEGRWNTLAN--SAGLKRTGKSCRLRWLNYLRPDVRRGNIT 306
Query: 64 KEEQRLVILLQANYGNKWKKIAAEVPGRTAKRLGKWWEVYKEKQQRE 110
EEQ L++ L +GN+W KIA +PGRT + +W +K ++
Sbjct: 307 LEEQLLILELHTRWGNRWSKIAQYLPGRTDNEIKNYWRTXVQKLAKQ 447
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.312 0.127 0.366
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,470,652
Number of Sequences: 36976
Number of extensions: 140456
Number of successful extensions: 1030
Number of sequences better than 10.0: 139
Number of HSP's better than 10.0 without gapping: 960
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 981
length of query: 341
length of database: 9,014,727
effective HSP length: 97
effective length of query: 244
effective length of database: 5,428,055
effective search space: 1324445420
effective search space used: 1324445420
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 59 (27.3 bits)
Lotus: description of TM0022.17