TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0022.15
         (313 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

BE999156                                                               30  1.6
AW560264                                                               28  4.6
BQ141904                                                               28  4.6

>BE999156 
          Length = 531

 Score = 29.6 bits (65), Expect = 1.6
 Identities = 15/43 (34%), Positives = 26/43 (59%)
 Frame = +2

Query: 170 KVFASRDEILEWARNLGKQHGFIIVITRSDNGGLKRKTFMILG 212
           ++++ RD++L+   N      FI +ITR D+G  +RK   +LG
Sbjct: 395 EIYSVRDDLLK*V*NEKPLLVFIFIITRLDHGENRRKMTFVLG 523


>AW560264 
          Length = 591

 Score = 28.1 bits (61), Expect = 4.6
 Identities = 23/76 (30%), Positives = 35/76 (45%), Gaps = 1/76 (1%)
 Frame = -3

Query: 8   TEFHHNQSETQHSI-LTKVTRSSIYSEQLSEQRSSKKRRKSSSPLLLLKLTGDGKMRENE 66
           +E H      + SI  T+V++ S  + QL         +K SS  L LKL+ D +  +  
Sbjct: 490 SEVHDKIDRMEESIHQTQVSKQSHLTTQLKRMNE----KKESSNFLKLKLSRDSESDQET 323

Query: 67  NFAILIFPAPSSVNSK 82
           N  + +    SS NSK
Sbjct: 322 NTILSLSLFSSSSNSK 275


>BQ141904 
          Length = 742

 Score = 28.1 bits (61), Expect = 4.6
 Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 7/61 (11%)
 Frame = -1

Query: 235 KCYCPFRLRARGTKVG-------WKVSVMNGYHIHERSETLLGHPYVGRPFTNKRLADGP 287
           K YC   L+ARG +         W ++V N     E  ++++ H   GRP T      GP
Sbjct: 319 KVYC-IMLKARGIQYSQHA*VKRWNITVWNLNEYMESHQSMVSH*QYGRPLTE----SGP 155

Query: 288 R 288
           R
Sbjct: 154 R 152


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.321    0.137    0.405 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,177,176
Number of Sequences: 36976
Number of extensions: 141078
Number of successful extensions: 704
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 703
length of query: 313
length of database: 9,014,727
effective HSP length: 96
effective length of query: 217
effective length of database: 5,465,031
effective search space: 1185911727
effective search space used: 1185911727
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)