TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0016.5
         (733 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

BG587170 similar to PIR|F86470|F8 probable retroelement polyprot...   122  6e-28
TC81230                                                               100  2e-21
TC93066 weakly similar to GP|19920130|gb|AAM08562.1 Putative ret...    78  1e-14
BF649643 similar to PIR|H86486|H86 protein Ty1/copia-element pol...    72  1e-12
AW691018 weakly similar to GP|2462935|em open reading frame 1 {B...    63  4e-10
BF645022 weakly similar to GP|8777581|dbj retroelement pol polyp...    53  5e-07
AW773859                                                               44  2e-04
TC92872                                                                42  6e-04
BI262818 weakly similar to GP|6642775|gb| gag-pol polyprotein {V...    42  0.001
TC88387 similar to GP|13357253|gb|AAK20050.1 putative zinc finge...    40  0.002
TC82733 similar to GP|10177404|dbj|BAB10535. gene_id:K24M7.12~pi...    35  0.079
AL366725                                                               35  0.10
BQ122291                                                               35  0.10
TC93152                                                                34  0.23
TC78961 similar to GP|18252179|gb|AAL61922.1 unknown protein {Ar...    34  0.23
BG645355 similar to PIR|G96590|G965 hypothetical protein T24C10....    34  0.23
TC87639 GP|9663153|emb|CAC01132.1 transport-secretion protein 2....    33  0.30
BQ154516                                                               33  0.51
TC84681 similar to GP|1370182|emb|CAA98168.1 RAB7A {Lotus japoni...    31  1.5
BG450673 homologue to GP|12055499|emb NADH dehydrogenase subunit...    31  1.5

>BG587170 similar to PIR|F86470|F8 probable retroelement polyprotein
           [imported] - Arabidopsis thaliana, partial (13%)
          Length = 718

 Score =  122 bits (305), Expect = 6e-28
 Identities = 72/175 (41%), Positives = 95/175 (54%)
 Frame = -3

Query: 426 SGKLIARGPKVGRLFPLCFSMSPCSSLPFVSCHSATVVNFELWHKRLGHPNSNVLYELLQ 485
           S +LI  G   G L+ L   + P S+       S+++    LWH RLGHP+   L  +L 
Sbjct: 704 SSQLIGEGVTKGDLYML-EKLDPVSNYKCSFTSSSSLNKDALWHARLGHPHGRALNLMLP 528

Query: 486 SGVLGNKETPSLSTIKFDCTYCKLGKSKILPFPNHQSNISQTFDMIHSDLWGITPVISHA 545
             V  NK          +C  C LGK     FP   +     FD+I++DLW   P +S  
Sbjct: 527 GVVFENK----------NCEACILGKHCKNVFPRTSTVYENCFDLIYTDLW-TAPSLSRD 381

Query: 546 NYKYFVTFIDDFSRFTWVYFLRSKDEVFSAFKFFHAYVETQFSSKIKILRSDNGG 600
           N+KYFVTFID+ S++TW+  + SKD V  AFK F AYV   + +KIKILRSDNGG
Sbjct: 380 NHKYFVTFIDEKSKYTWLTLIPSKDRVIDAFKNFQAYVTNHYHAKIKILRSDNGG 216


>TC81230 
          Length = 958

 Score =  100 bits (250), Expect = 2e-21
 Identities = 71/264 (26%), Positives = 120/264 (44%), Gaps = 10/264 (3%)
 Frame = +1

Query: 4   EKYEV---LLVRLNGKNYSAWAFEFQIFVKGKSLWGHVDGSTSALDKEKQETEYA----- 55
           EK EV   + + LNG NY+ WA     F+KG+ LW +V G      K K +T  A     
Sbjct: 202 EKLEVTPPISIILNGSNYNHWAESMCGFLKGRRLWRYVTGDKKCPTKGKDDTADAFADKL 381

Query: 56  -DWEVKDNQVLAWIIRFVDPNIVLNLRPFSTAAKMWAYLKKIYNQNNTARRFQLEHDIA- 113
            +W+ K++Q++ W      P+I +    F  A ++W +LK+ Y  ++ + ++QL  D++ 
Sbjct: 382 EEWDSKNHQIITWFRNTSIPSIHMQFGRFENAKEVWDHLKQRYTISDLSHQYQLLKDLSN 561

Query: 114 IFQQEILSISEFYSQFMNLWADYTDIVYGSVSTEGLTSVQTVHETTK*DQFLMKLRSDFE 173
           + QQ    + EF +Q   +W   T           + + +T     +  QFLM L  ++E
Sbjct: 562 LKQQSGQPVYEFLAQMEVIWNQLTSCEPSLKDATDMKTYETHRNRVRLIQFLMALTDEYE 741

Query: 174 GIRTNLMNRATVPS*DACLNELLREERRLLTLATMEQHKSASLPVAYVVQEKPRGRDLSA 233
            +R + +++  +P+ +  L  L  EE RL       Q       +A+ V         + 
Sbjct: 742 PVRASSLHQNPLPTLENALPCLKSEETRL-------QLVPPKADLAFAVTNN------AT 882

Query: 234 VQCFCCKGFGHYASNCPRKSCNYC 257
             C  C+  GH  S+CP   C  C
Sbjct: 883 KPCRHCQKSGHSFSDCPTIECRNC 954


>TC93066 weakly similar to GP|19920130|gb|AAM08562.1 Putative retroelement
           {Oryza sativa} [Oryza sativa (japonica cultivar-group)],
           partial (10%)
          Length = 823

 Score = 77.8 bits (190), Expect = 1e-14
 Identities = 41/97 (42%), Positives = 51/97 (52%), Gaps = 4/97 (4%)
 Frame = +1

Query: 506 YCK----LGKSKILPFPNHQSNISQTFDMIHSDLWGITPVISHANYKYFVTFIDDFSRFT 561
           +CK     G  K + F           D IHSDLWG + V S+   +Y +T IDDF R  
Sbjct: 19  FCKHLLFFGNRKKVSFSTATHRTKGILDYIHSDLWGPSKVTSYGGRRYMMTIIDDFPRKV 198

Query: 562 WVYFLRSKDEVFSAFKFFHAYVETQFSSKIKILRSDN 598
           WVYFLR K+E F  FK +   VETQ    +K L +DN
Sbjct: 199 WVYFLRYKNETFPTFKKWRILVETQTGKNVKKLITDN 309


>BF649643 similar to PIR|H86486|H86 protein Ty1/copia-element polyprotein
           [imported] - Arabidopsis thaliana, partial (2%)
          Length = 608

 Score = 71.6 bits (174), Expect = 1e-12
 Identities = 33/122 (27%), Positives = 63/122 (51%)
 Frame = +1

Query: 12  RLNGKNYSAWAFEFQIFVKGKSLWGHVDGSTSALDKEKQETEYADWEVKDNQVLAWIIRF 71
           +LNG NYS+W+      +  K+  G ++GS     +  Q  EYA W   ++ +L+W+   
Sbjct: 172 KLNGTNYSSWSRSMVHALTAKNKVGFINGSIKTPSEVDQPAEYALWNRCNSMILSWLTHS 351

Query: 72  VDPNIVLNLRPFSTAAKMWAYLKKIYNQNNTARRFQLEHDIAIFQQEILSISEFYSQFMN 131
           V+P++   +    TA ++W   K  ++Q N    +Q++  +A   Q  +S S ++++   
Sbjct: 352 VEPDLAKGVIHAKTACQVWEDFKDQFSQKNIPAIYQIQKSLASLSQGTVSASTYFTKIKG 531

Query: 132 LW 133
           LW
Sbjct: 532 LW 537


>AW691018 weakly similar to GP|2462935|em open reading frame 1 {Brassica
           oleracea}, partial (12%)
          Length = 639

 Score = 63.2 bits (152), Expect = 4e-10
 Identities = 33/120 (27%), Positives = 66/120 (54%)
 Frame = +2

Query: 13  LNGKNYSAWAFEFQIFVKGKSLWGHVDGSTSALDKEKQETEYADWEVKDNQVLAWIIRFV 72
           LNG NY  W+    + +  K+  G +DG+  A   +  +     W+  ++ VL WI+  +
Sbjct: 209 LNGGNYGEWSRSMLLSLSAKNKLGLIDGTVKAPSADDPKLPL--WKRCNDLVLTWILHSI 382

Query: 73  DPNIVLNLRPFSTAAKMWAYLKKIYNQNNTARRFQLEHDIAIFQQEILSISEFYSQFMNL 132
           +P+I  ++    TAA +W+ L   ++Q + +R +Q+  +I+  +Q  L IS++Y++  +L
Sbjct: 383 EPDIARSVIFSDTAAAVWSDLHDRFSQGDESRIYQIRQEISECRQGSLLISDYYTKLKSL 562


>BF645022 weakly similar to GP|8777581|dbj retroelement pol polyprotein-like
           {Arabidopsis thaliana}, partial (8%)
          Length = 685

 Score = 52.8 bits (125), Expect = 5e-07
 Identities = 26/107 (24%), Positives = 53/107 (49%)
 Frame = -2

Query: 11  VRLNGKNYSAWAFEFQIFVKGKSLWGHVDGSTSALDKEKQETEYADWEVKDNQVLAWIIR 70
           ++L G NY  W+   +   + K  +G V+G    + K     +  DW+   + ++AW++ 
Sbjct: 330 IQLRGLNYDEWSRAIRTSFQAKRKYGFVEGK---IPKPTTPEKLEDWKAVQSMLIAWLLN 160

Query: 71  FVDPNIVLNLRPFSTAAKMWAYLKKIYNQNNTARRFQLEHDIAIFQQ 117
            ++P++   L  +  A  +W +LK+ +   N AR  QL+  +   +Q
Sbjct: 159 TIEPSLRSTLSYYDDAESLWTHLKQRFCVVNGARICQLKASLGECKQ 19


>AW773859 
          Length = 538

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 31/122 (25%), Positives = 52/122 (42%), Gaps = 4/122 (3%)
 Frame = -3

Query: 420 LVQDQHSGKLIARGPKVGRLFPLCFSMSPCSSLPFVSCHSATVVNF----ELWHKRLGHP 475
           L+Q++ S K+I  G     L+ L    +P +++            F     LWH RLGH 
Sbjct: 383 LIQEKRSLKMIGSGELFEGLYFLTTQDTPSATIASSQVQPQPQPTFLPQEALWHFRLGHL 204

Query: 476 NSNVLYELLQSGVLGNKETPSLSTIKFDCTYCKLGKSKILPFPNHQSNISQTFDMIHSDL 535
           ++  L  L  +      +  S+      C  C   + K LPF    +  S+ +++ H D+
Sbjct: 203 SNRKLLSLHSNFPFITIDQNSV------CDICHYSRHKKLPFQLSTNRASKCYELFHFDI 42

Query: 536 WG 537
           WG
Sbjct: 41  WG 36


>TC92872 
          Length = 923

 Score = 42.4 bits (98), Expect = 6e-04
 Identities = 27/146 (18%), Positives = 63/146 (42%), Gaps = 7/146 (4%)
 Frame = +1

Query: 12  RLNGKNYSAWAFEFQIFVKGKSLWGHVDGSTSALDK-------EKQETEYADWEVKDNQV 64
           +L+ KN+ AW  +    + G  + GH+DG+T    +            +Y  W   D  +
Sbjct: 106 KLSRKNFRAWKRQVTTLLAGIEVMGHIDGTTPIQTETIINNGVSAPNPDYTKWFTLDQLI 285

Query: 65  LAWIIRFVDPNIVLNLRPFSTAAKMWAYLKKIYNQNNTARRFQLEHDIAIFQQEILSISE 124
           +  ++  +     ++   + TA  +W  ++  +N  + +    + + I    +   SI++
Sbjct: 286 INLLLSSMTEADSISFASYETARTLWVAIESQFNNTSRSHVMSVTNQIQRCTKGDKSITD 465

Query: 125 FYSQFMNLWADYTDIVYGSVSTEGLT 150
           +     +L AD   ++  S+S + +T
Sbjct: 466 YLFSVKSL-ADELAVIDKSLSDDDIT 540


>BI262818 weakly similar to GP|6642775|gb| gag-pol polyprotein {Vitis
           vinifera}, partial (24%)
          Length = 615

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 25/123 (20%), Positives = 51/123 (41%), Gaps = 5/123 (4%)
 Frame = +1

Query: 14  NGKNYSAWAFEFQIFVKGKSLWGHVDGSTSALDKEKQET-----EYADWEVKDNQVLAWI 68
           +G+NY  WA   + +++   LW  V+     L      T      + + + + ++  A +
Sbjct: 187 DGENYHIWAARIEAYLEANDLWEAVEEDYEVLPLSDNPTMAQIKNHKERKTRKSKARATL 366

Query: 69  IRFVDPNIVLNLRPFSTAAKMWAYLKKIYNQNNTARRFQLEHDIAIFQQEILSISEFYSQ 128
              V   I   +    +A ++W +LK  Y  +   R  Q  + I  F+ + +  SE   +
Sbjct: 367 FAAVSEEIFTRIMTIKSAFEIWNFLKTEYEGDERIRGMQALNLIREFEMQKMKESETIKE 546

Query: 129 FMN 131
           + N
Sbjct: 547 YAN 555


>TC88387 similar to GP|13357253|gb|AAK20050.1 putative zinc finger protein
           {Oryza sativa (japonica cultivar-group)}, partial (96%)
          Length = 1286

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 19/40 (47%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
 Frame = +1

Query: 236 CFCCKGFGHYASNCPRKS-CNYCKKDGHVIKEC--PIRPP 272
           C+ CK  GH AS+CP +  C+ C K GH  +EC  P +PP
Sbjct: 538 CWNCKEPGHMASSCPNEGICHTCGKAGHRARECTVPQKPP 657



 Score = 39.3 bits (90), Expect = 0.005
 Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
 Frame = +1

Query: 222 VQEKPRGRDLSAVQCFCCKGFGHYASNCPR-KSCNYCKKDGHVIKECPIRP 271
           V +KP G DL    C  C   GH A  C   K+CN C+K GH+ ++CP  P
Sbjct: 640 VPQKPPG-DLRL--CNNCYKQGHIAVECTNEKACNNCRKTGHLARDCPNDP 783



 Score = 37.7 bits (86), Expect = 0.016
 Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = +1

Query: 236 CFCCKGFGHYASNCPRKS-CNYCKKDGHVIKECP 268
           C  C+  GH A +CP    CN C   GHV ++CP
Sbjct: 730 CNNCRKTGHLARDCPNDPICNLCNISGHVARQCP 831



 Score = 34.7 bits (78), Expect = 0.13
 Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = +1

Query: 236 CFCCKGFGHYASNCPRKS-CNYCKKDGHVIKECP 268
           C  C   GH AS C  KS C  CK+ GH+   CP
Sbjct: 481 CHNCSLPGHIASECSTKSLCWNCKEPGHMASSCP 582



 Score = 34.7 bits (78), Expect = 0.13
 Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
 Frame = +1

Query: 236 CFCCKGFGHYASNCPRKS-CNYCKKDGHVIKEC 267
           C  CK  GHY   CP  + C+ C   GH+  EC
Sbjct: 424 CKNCKRPGHYVRECPNVAVCHNCSLPGHIASEC 522


>TC82733 similar to GP|10177404|dbj|BAB10535.
           gene_id:K24M7.12~pir||S42136~similar to unknown protein
           {Arabidopsis thaliana}, partial (57%)
          Length = 710

 Score = 35.4 bits (80), Expect = 0.079
 Identities = 15/40 (37%), Positives = 20/40 (49%), Gaps = 7/40 (17%)
 Frame = +3

Query: 236 CFCCKGFGHYASNCPRKS-------CNYCKKDGHVIKECP 268
           CF CKG  H A  C +K+       C  C++ GH  + CP
Sbjct: 282 CFICKGLDHIAKFCTQKAEWEKNKICLRCRRRGHRAQNCP 401



 Score = 31.6 bits (70), Expect = 1.1
 Identities = 14/39 (35%), Positives = 17/39 (42%), Gaps = 9/39 (23%)
 Frame = +3

Query: 239 CKGFGHYASNCPRK---------SCNYCKKDGHVIKECP 268
           C   GH  +NCP            C  CK+ GH+ K CP
Sbjct: 441 CGDNGHSLANCPHPLQEGGTMFAQCFVCKEQGHLSKNCP 557



 Score = 31.6 bits (70), Expect = 1.1
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +3

Query: 235 QCFCCKGFGHYASNCPRKSCNYCKKDG 261
           QCF CK  GH + NCP+ +     K G
Sbjct: 510 QCFVCKEQGHLSKNCPKNAHGIYPKGG 590


>AL366725 
          Length = 485

 Score = 35.0 bits (79), Expect = 0.10
 Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
 Frame = +2

Query: 221 VVQEKPRGRDLSA-VQCFCCKGFGHYASNCPR--KSCNYCKKDGHVIKEC 267
           V   +P+ +D  A + CF     GH ++ CP+  K C  C K GH++ +C
Sbjct: 260 VDDRRPKKKDAPAEIVCFNYGEKGHKSNVCPKEIKKCVRCDKKGHIVADC 409


>BQ122291 
          Length = 487

 Score = 35.0 bits (79), Expect = 0.10
 Identities = 30/149 (20%), Positives = 62/149 (41%), Gaps = 1/149 (0%)
 Frame = -2

Query: 54  YADWEVKDNQVLAWIIRFVDPNIVLNLRPFSTAAKMWAYLKKIYNQNNTARRFQLEHDIA 113
           Y +WE KD+ +  WI+  + P+++        + ++W  +          R  QL  ++ 
Sbjct: 450 YTEWEDKDSLLCTWILSRISPSLLSRFVLLRHSWQVWDEIHSYCFTQMKTRSRQLRSELR 271

Query: 114 IFQQEILSISEFYSQFMNLWADYTDIVYGSVSTEGLTSV-QTVHETTK*DQFLMKLRSDF 172
              +   ++SEF ++   +             +E L S+   V      +  L  L  +F
Sbjct: 270 SITKGSRTVSEFIARIRAI-------------SESLASIGDPVSHRDLIEVVLEALPEEF 130

Query: 173 EGIRTNLMNRATVPS*DACLNELLREERR 201
           + I  ++  ++ V S D   ++LL +E R
Sbjct: 129 DPIVASVNAKSEVVSLDELESQLLTQESR 43


>TC93152 
          Length = 647

 Score = 33.9 bits (76), Expect = 0.23
 Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
 Frame = +3

Query: 13  LNGKNYSAWAFEFQIFVKGKSLWGHVDG-STSALDKEKQETEYADWEVKDNQVLAWIIRF 71
           L   NY  W+   + ++ G+ LWG V   S S   + ++ETE   W  ++ + L  I   
Sbjct: 150 LTKDNYDYWSCLVRNYLLGQDLWGFVTSISESTGPRSRRETEV--WNRRNGKALHIIQLA 323

Query: 72  VDPNIVLNLRPFSTAAKMWAYLKKIYNQNNTA 103
             P  +  ++   +A + W  L   Y+ + +A
Sbjct: 324 CGPENINLIKDLQSAREAWNELSTHYSSDLSA 419


>TC78961 similar to GP|18252179|gb|AAL61922.1 unknown protein {Arabidopsis
           thaliana}, partial (71%)
          Length = 974

 Score = 33.9 bits (76), Expect = 0.23
 Identities = 17/51 (33%), Positives = 24/51 (46%), Gaps = 4/51 (7%)
 Frame = +2

Query: 227 RGRDLSAVQCFCCKGFGHYASNCP----RKSCNYCKKDGHVIKECPIRPPK 273
           RG    + +CF C   GH+A +C     +  C  C + GH+ K C   P K
Sbjct: 332 RGPPPGSGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCKNSPKK 484


>BG645355 similar to PIR|G96590|G965 hypothetical protein T24C10.5 [imported]
           - Arabidopsis thaliana, partial (5%)
          Length = 627

 Score = 33.9 bits (76), Expect = 0.23
 Identities = 16/49 (32%), Positives = 21/49 (42%), Gaps = 15/49 (30%)
 Frame = -1

Query: 235 QCFCCKGFGHYASNCPRKS---------------CNYCKKDGHVIKECP 268
           +C+ C+  GH+ASNCP  S               C  C + GH    CP
Sbjct: 504 KCYKCQQPGHWASNCPSMSAANRVSGGSGGASGNCYKCNQPGHWANNCP 358


>TC87639 GP|9663153|emb|CAC01132.1 transport-secretion protein 2.2 (TTS-2.2)
           {Homo sapiens}, partial (2%)
          Length = 1522

 Score = 33.5 bits (75), Expect = 0.30
 Identities = 61/269 (22%), Positives = 100/269 (36%), Gaps = 25/269 (9%)
 Frame = -1

Query: 30  KGKSLWGHVDGSTSALDKEKQETEYADWEVKDNQVLAWIIRFVDPNIVLNLRPFSTAA-- 87
           K  S W H       +D++  ET+   W +        +   +DP +   +  F  A   
Sbjct: 964 KEYSAWAHQMRGKLKIDRDFFETDEQRWYL--------VYSCLDPGVQQVVETFFAAGGP 809

Query: 88  -------KMWAYLKKIYNQNNTARRFQLEHDIAIFQQEILSISEFYSQFMNLWAD----- 135
                     AYL + Y   N   R   +   ++ Q++   ++ F  +F  + AD     
Sbjct: 808 GGNQDPQDFMAYLDRTYLDPNIQSRAVAQLQ-SLRQKDTERLATFLPRFEKVLADAGGYS 632

Query: 136 YTDIVYGSVSTEGLTS-----VQTVHETTK*DQFLMKLRSDFEGIRTNLMNRATVPS*DA 190
           + D+V  S+    L       + TV   T   Q+L K++     I   +    T P+  A
Sbjct: 631 WPDVVQISLLETALVPRLKELLITVELPTVYSQWLSKVQD----IAWKMERMKTPPTRWA 464

Query: 191 CLNELL----REERRLLTLATMEQHK--SASLPVAYVVQEKPRGRDLSAVQCFCCKGFGH 244
               L     R+   ++T A  +Q +   +S  V+      P  RD+   +C+ C   GH
Sbjct: 463 PATRLPVSKDRDGDMMMTGAIHKQRRRRGSSSSVSSAEGAPPPRRDMR--ECYSCHERGH 290

Query: 245 YASNCPRKSCNYCKKDGHVIKECPIRPPK 273
            A NC   S    KK G   K   + P K
Sbjct: 289 IARNCTNTSAAKKKKKGP--KVAKVEPQK 209


>BQ154516 
          Length = 506

 Score = 32.7 bits (73), Expect = 0.51
 Identities = 18/44 (40%), Positives = 27/44 (60%), Gaps = 4/44 (9%)
 Frame = +1

Query: 445 SMSPCSS--LPFVSCHSATVVN--FELWHKRLGHPNSNVLYELL 484
           S+S C++  +  V C+S++  N  F  WH RLGH N NV+  +L
Sbjct: 325 SLSYCNNATISSVVCNSSSSSNDSFNKWHCRLGHANPNVVKSIL 456



 Score = 30.4 bits (67), Expect = 2.5
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +3

Query: 331 SPNSSPWYFDYGASNHMANNAEALTNITQNFGNLKIQVANG 371
           S + +PWY D GAS+H+  N   L   T   G  ++ + NG
Sbjct: 108 SYSEAPWYPDSGASHHLTFNPHNLAYRTPYNGQEQVLMDNG 230


>TC84681 similar to GP|1370182|emb|CAA98168.1 RAB7A {Lotus japonicus},
           partial (63%)
          Length = 856

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 18/62 (29%), Positives = 28/62 (45%)
 Frame = -1

Query: 456 SCHSATVVNFELWHKRLGHPNSNVLYELLQSGVLGNKETPSLSTIKFDCTYCKLGKSKIL 515
           +C S T     LW+         VL+ L+  G LGN +  S++ +   C   K+G    +
Sbjct: 406 ACTSTTTTLLTLWNSLRNSLKIYVLFTLIGQGSLGNTQECSINIVILFCRCLKVGN---I 236

Query: 516 PF 517
           PF
Sbjct: 235 PF 230


>BG450673 homologue to GP|12055499|emb NADH dehydrogenase subunit 2 {Sphagnum
           fallax}, partial (2%)
          Length = 678

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 16/62 (25%), Positives = 28/62 (44%)
 Frame = +3

Query: 29  VKGKSLWGHVDGSTSALDKEKQETEYADWEVKDNQVLAWIIRFVDPNIVLNLRPFSTAAK 88
           V GK   G+++G        + +  +  W   +  V  WII  +D +++ N   FST   
Sbjct: 222 VSGKDKLGYINGDLPP--PPQTDPTFRRWGTDNAIVKGWIINSMDSSLISNFIRFSTTKL 395

Query: 89  MW 90
           +W
Sbjct: 396 VW 401


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.331    0.141    0.457 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,443,886
Number of Sequences: 36976
Number of extensions: 434563
Number of successful extensions: 2892
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 2129
Number of HSP's successfully gapped in prelim test: 92
Number of HSP's that attempted gapping in prelim test: 687
Number of HSP's gapped (non-prelim): 2297
length of query: 733
length of database: 9,014,727
effective HSP length: 103
effective length of query: 630
effective length of database: 5,206,199
effective search space: 3279905370
effective search space used: 3279905370
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 62 (28.5 bits)