TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0014.22
         (284 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC79918 similar to PIR|T06671|T06671 hypothetical protein T17F15...    29  1.8
TC89169 similar to GP|15809950|gb|AAL06902.1 AT4g22740/T12H17_13...    28  3.1
TC84495 similar to GP|13027361|dbj|BAB32722. hypothetical protei...    28  3.1
AL386527 weakly similar to GP|1498122|dbj| Om(1E) protein {Droso...    27  6.8
TC93749 similar to GP|3947733|emb|CAA08797.1 NL25 {Solanum tuber...    27  8.9
TC93377 homologue to GP|15290125|dbj|BAB63817. putative kinase {...    27  8.9
TC78284 homologue to PIR|B84581|B84581 probable clathrin assembl...    27  8.9

>TC79918 similar to PIR|T06671|T06671 hypothetical protein T17F15.10 -
           Arabidopsis thaliana, partial (39%)
          Length = 1269

 Score = 29.3 bits (64), Expect = 1.8
 Identities = 40/167 (23%), Positives = 63/167 (36%), Gaps = 11/167 (6%)
 Frame = +1

Query: 56  APEELQVLAEWRFNLDNIAANGYDLRPEVQVQGWEEYFNRLRGPIYDKLVKEFWKHADCD 115
           AP E +V A+ +  L   AA   D     +  GWE +              EF K A  D
Sbjct: 733 APAE-RVKAKMKLQLSETAARDSD-----RGVGWERF--------------EFNKDAPLD 852

Query: 116 DTQVVSYIAGRRIIIIEKSIVNLLGAHTGTGYRFQLTESKVKPRTKDETNKALY------ 169
           D +V        ++            H G  +RF   ESK + + +   ++A++      
Sbjct: 853 DEEVEGAEDDASLV-----------KHIGQSFRFSAVESKREDQIQAAHDEAMFGAPAPP 999

Query: 170 -----TTYKPGKSDYKVVDLHPKLRIWHKILLHCINQRPKGSSPDYI 211
                T  +P + + K VD   K  +   +L   +  RPKGS  D +
Sbjct: 1000PPTSSTDSEPERENEKEVD--NKKDLVSSLLSETVLARPKGSWRDRV 1134


>TC89169 similar to GP|15809950|gb|AAL06902.1 AT4g22740/T12H17_130
           {Arabidopsis thaliana}, partial (24%)
          Length = 771

 Score = 28.5 bits (62), Expect = 3.1
 Identities = 15/50 (30%), Positives = 24/50 (48%)
 Frame = +1

Query: 173 KPGKSDYKVVDLHPKLRIWHKILLHCINQRPKGSSPDYINFCQKAMLFFI 222
           + GK  +K     P  + W KI+ +C +Q    SSP  I+     M+F +
Sbjct: 433 REGKDRFKWQGCIPPRKAWPKIIFYCCSQVDHYSSP--IHLSNSVMIFHV 576


>TC84495 similar to GP|13027361|dbj|BAB32722. hypothetical protein~similar
           to Arabidopsis thaliana chromosome 1  F22C12.16, partial
           (15%)
          Length = 675

 Score = 28.5 bits (62), Expect = 3.1
 Identities = 13/29 (44%), Positives = 18/29 (61%)
 Frame = +3

Query: 192 HKILLHCINQRPKGSSPDYINFCQKAMLF 220
           H +LLHC NQ+P   S   ++  QK +LF
Sbjct: 153 HNLLLHC*NQQPSFVSSCLVSRNQKPILF 239


>AL386527 weakly similar to GP|1498122|dbj| Om(1E) protein {Drosophila
           ananassae}, partial (4%)
          Length = 452

 Score = 27.3 bits (59), Expect = 6.8
 Identities = 11/24 (45%), Positives = 15/24 (61%)
 Frame = -3

Query: 86  VQGWEEYFNRLRGPIYDKLVKEFW 109
           +Q W+ YF RL  PIY+  VK  +
Sbjct: 288 LQTWKRYF*RLNQPIYNLFVKSLF 217


>TC93749 similar to GP|3947733|emb|CAA08797.1 NL25 {Solanum tuberosum},
           partial (17%)
          Length = 772

 Score = 26.9 bits (58), Expect = 8.9
 Identities = 12/53 (22%), Positives = 26/53 (48%)
 Frame = +2

Query: 55  YAPEELQVLAEWRFNLDNIAANGYDLRPEVQVQGWEEYFNRLRGPIYDKLVKE 107
           YA   ++   +++  L+ +    + LR    + GWE   NR+   + +K+ K+
Sbjct: 371 YAEAFVKHEKQFQGKLEKVQTWRHALREAANISGWECSVNRMESELLEKIAKD 529


>TC93377 homologue to GP|15290125|dbj|BAB63817. putative kinase {Oryza
           sativa (japonica cultivar-group)}, partial (4%)
          Length = 424

 Score = 26.9 bits (58), Expect = 8.9
 Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
 Frame = -3

Query: 188 LRIWHKILLHCINQRPKGSSPDYINFCQKAMLFFIQDKRKICLP--FFLFSYLKE 240
           L+ +  +LLHC N  P            K  L FIQ   KI  P  FFL +Y K+
Sbjct: 194 LKQFKNLLLHCFNNTP-----------SKIFLTFIQ*ATKIA*PSMFFL*NYNKQ 63


>TC78284 homologue to PIR|B84581|B84581 probable clathrin assembly protein
           [imported] - Arabidopsis thaliana, partial (98%)
          Length = 854

 Score = 26.9 bits (58), Expect = 8.9
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +1

Query: 217 AMLFFIQDKRKICLPFFLFSYLKECI 242
           ++ FF  +K K+    F+ SYL +CI
Sbjct: 649 SIFFFFMNKTKVAYFIFIISYLLDCI 726


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.322    0.139    0.427 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,965,385
Number of Sequences: 36976
Number of extensions: 128701
Number of successful extensions: 650
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 645
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 649
length of query: 284
length of database: 9,014,727
effective HSP length: 95
effective length of query: 189
effective length of database: 5,502,007
effective search space: 1039879323
effective search space used: 1039879323
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.9 bits)