BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0012a.8
(719 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC83528 96 5e-20
BG647389 69 5e-20
BE999414 59 7e-09
TC90865 homologue to GP|9049326|dbj|BAA99336.1 orf129b {Beta vul... 42 0.001
BG448304 40 0.002
TC81043 weakly similar to GP|6523547|emb|CAB62280.1 hydroxyproli... 40 0.004
TC81718 weakly similar to GP|22532805|gb|AAM97960.1 C. elegans P... 40 0.004
TC86766 weakly similar to PIR|T06291|T06291 extensin homolog T9E... 39 0.005
AW695759 weakly similar to PIR|A96523|A965 hypothetical protein ... 39 0.007
TC82269 weakly similar to GP|14581464|gb|AAK31804.1 protocadheri... 37 0.027
TC82364 similar to GP|20268740|gb|AAM14073.1 unknown protein {Ar... 37 0.035
TC89839 homologue to SP|P23466|CYAA_SACKL Adenylate cyclase (EC ... 37 0.035
BQ144502 weakly similar to GP|6523547|emb hydroxyproline-rich gl... 37 0.035
TC79800 similar to SP|O43280|TREA_HUMAN Trehalase precursor (EC ... 37 0.035
TC93249 weakly similar to GP|13877617|gb|AAK43886.1 protein kina... 36 0.045
TC77786 36 0.059
BQ151174 similar to GP|11036868|gb| PxORF73 peptide {Plutella xy... 36 0.059
AW697042 similar to GP|13122418|dbj putative glycin-rich protein... 36 0.059
TC77694 homologue to PIR|T09704|T09704 probable arginine/serine-... 36 0.059
BQ144306 weakly similar to GP|23093252|gb| CG13731-PA {Drosophil... 36 0.059
>TC83528
Length = 555
Score = 95.9 bits (237), Expect = 5e-20
Identities = 53/125 (42%), Positives = 81/125 (64%), Gaps = 4/125 (3%)
Frame = +3
Query: 554 PIVVQLRMNS-FNVRRVLLDQGSSADIIYGDAFDKLGLTDNGLTPYAGTLVGFAGEQVMV 612
P+V++L++N+ F+V RV ++ S DI+Y AF K+ L ++ L P G L G G+ + V
Sbjct: 180 PMVIKLQINNNFSVLRVFVNPMSKVDILYWSAFLKMKLQESMLKPCQGFLKGTFGKGLPV 359
Query: 613 RGYIDLDTIFGEDECARVLKVRYLVLQ---VVASYNVIIGRNTLNRLCAVISTAHLAVKY 669
+GYIDLDT FG+ E + +KVRY V++ V+ YNV++G +L L AV+S A +KY
Sbjct: 360 KGYIDLDTTFGKGENTKTIKVRYFVVESPPSVSIYNVVLGWPSLKDLKAVLSVAEFTIKY 539
Query: 670 PLSSG 674
P+ G
Sbjct: 540 PVGDG 554
>BG647389
Length = 718
Score = 68.6 bits (166), Expect(2) = 5e-20
Identities = 33/85 (38%), Positives = 54/85 (62%)
Frame = +1
Query: 181 KSTAMAWFTTLPRGSISNFRDFSSKFLVQFSANKNQPVTINDLYNIRQQEGESLKEYMAR 240
K W+ LPR SI+ +++ + K + QFSA+K+ V+ +L+N+RQ ESL EY+
Sbjct: 451 KEATQQWYMNLPRFSITGYQNMTHKLVHQFSASKHCKVSTTNLFNVRQDPNESLPEYLV* 630
Query: 241 YSAASVKVEDEEPRACALAFKNGLL 265
++ A++KV + + A AF+NGLL
Sbjct: 631 FNNATIKVVNPKQELFAGAFQNGLL 705
Score = 47.8 bits (112), Expect(2) = 5e-20
Identities = 22/70 (31%), Positives = 42/70 (59%)
Frame = +2
Query: 104 RREQRDDGSREADSVAEFRPFSEDVESVAIPDNMKTLVLDSYSGDSDPKDHLLYFNTKMV 163
++ ++D+ RE + +P S D+ + + +N+K+L L S+ SDP +H FNT+M
Sbjct: 224 QQHEQDELHREDVDELDPQPLSMDIWNAPVLENLKSLSLLSFDDKSDPVEHATTFNTQMA 403
Query: 164 IIAASDAVKC 173
+I A +++C
Sbjct: 404 VIGALKSLRC 433
>BE999414
Length = 613
Score = 58.9 bits (141), Expect = 7e-09
Identities = 26/76 (34%), Positives = 41/76 (53%)
Frame = +3
Query: 142 LDSYSGDSDPKDHLLYFNTKMVIIAASDAVKCRMFPSTFKSTAMAWFTTLPRGSISNFRD 201
+DSY G DP +H+ + + AVKC++F +T + AM WF L R SI ++ D
Sbjct: 9 MDSYDGT*DPDEHMENIEVVLTYRSVRGAVKCKLFVTTLRRGAMTWFKNLRRNSIGSWGD 188
Query: 202 FSSKFLVQFSANKNQP 217
+F F+ ++ QP
Sbjct: 189 LCHEFTTHFTVSRTQP 236
>TC90865 homologue to GP|9049326|dbj|BAA99336.1 orf129b {Beta vulgaris},
partial (16%)
Length = 940
Score = 41.6 bits (96), Expect = 0.001
Identities = 23/55 (41%), Positives = 32/55 (57%), Gaps = 1/55 (1%)
Frame = -3
Query: 565 NVRRVLLDQGSSADIIYGDAFDKLGLTDNGLTPYAG-TLVGFAGEQVMVRGYIDL 618
+VR+++LD GSS DI+Y + F L L + L Y G L GF G GY++L
Sbjct: 938 DVRKIILD*GSSCDIMYSNMF*TLQLLEKNLISYVGFDLQGFNGATTRP*GYVEL 774
>BG448304
Length = 637
Score = 40.4 bits (93), Expect = 0.002
Identities = 31/117 (26%), Positives = 49/117 (41%), Gaps = 8/117 (6%)
Frame = +2
Query: 396 PEAPKYHPRDANPKKWCEFHRSAGHDTDDCWTLHREIDKLIRAGYQGNRQGQWRNSGDQN 455
P+ P + + K+C FH+ H TDDC L I+ LI+ G N +N
Sbjct: 65 PKTPTQENKGTDKTKYCRFHKCHRHLTDDCIHLKDTIEILIQRGR--------LNQLTKN 220
Query: 456 KAHKREEERADTKGKKKQESAAIATKGADDTFAQH--------SGPPVGTINTIAGG 504
+++ + T K K A++ + D+ F +H + P T N I GG
Sbjct: 221 PEPEKQTVKLITDKKNKDIVVAMSVEQLDE-FVEHVDITPYSCTWEPFPTANVITGG 388
>TC81043 weakly similar to GP|6523547|emb|CAB62280.1 hydroxyproline-rich
glycoprotein DZ-HRGP {Volvox carteri f. nagariensis},
partial (19%)
Length = 555
Score = 39.7 bits (91), Expect = 0.004
Identities = 22/51 (43%), Positives = 25/51 (48%)
Frame = +1
Query: 18 SPPRRPHRVDLDSPVRTAGVQSPSHPPSPPPPPSPSQVGSREHSPGNSPAP 68
SPP+ P SP A P+ PP PP PP+P GS P SPAP
Sbjct: 235 SPPKPPAPPSPGSPPAPA----PAPPPIPPSPPAPPSPGSPPSPPPASPAP 375
Score = 32.0 bits (71), Expect = 0.85
Identities = 15/35 (42%), Positives = 17/35 (47%)
Frame = +1
Query: 39 SPSHPPSPPPPPSPSQVGSREHSPGNSPAPEQQPA 73
SP PP PP PPSP + +P P P PA
Sbjct: 226 SPGSPPKPPAPPSPGSPPA--PAPAPPPIPPSPPA 324
Score = 31.6 bits (70), Expect = 1.1
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +1
Query: 39 SPSHPPSPPPPPSPSQVGSREHSPGNSPAPEQQP 72
+P P SPP PP+P SPG+ PAP P
Sbjct: 217 APPSPGSPPKPPAPP-------SPGSPPAPAPAP 297
>TC81718 weakly similar to GP|22532805|gb|AAM97960.1 C. elegans PQN-75
protein (corresponding sequence W03D2.1b)
{Caenorhabditis elegans}, partial (10%)
Length = 546
Score = 39.7 bits (91), Expect = 0.004
Identities = 26/63 (41%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +3
Query: 18 SPPRRPHRVDLDSPVRTAGVQSPSHPPSPPPPPSP-SQVGSREHSPGNSPAPEQQPAVTQ 76
SPP RP L P T G SP P SPPP P+P S S + +PG+ P P P +
Sbjct: 282 SPPTRPPSSPLPDP--TTG--SPPPPGSPPPDPTPGSPPPSPDPTPGSPPPPGSPPDPSW 449
Query: 77 EQW 79
E +
Sbjct: 450 ESF 458
>TC86766 weakly similar to PIR|T06291|T06291 extensin homolog T9E8.80 -
Arabidopsis thaliana, partial (18%)
Length = 1260
Score = 39.3 bits (90), Expect = 0.005
Identities = 30/77 (38%), Positives = 31/77 (39%), Gaps = 14/77 (18%)
Frame = +2
Query: 10 HSPMRQRISPPRRPHRVDLD-----SPVRTAGVQSPSHP------PSPPP---PPSPSQV 55
HSP SPP PH SP V SP P PSPPP PP P
Sbjct: 140 HSPPPPPXSPPPPPHSPTPPVYPYLSPPPPPPVHSPPPPVYSPPPPSPPPCVEPPPPPPP 319
Query: 56 GSREHSPGNSPAPEQQP 72
E P +SPAP Q P
Sbjct: 320 PCVEPPPPSSPAPHQTP 370
Score = 32.7 bits (73), Expect = 0.50
Identities = 17/35 (48%), Positives = 19/35 (53%), Gaps = 1/35 (2%)
Frame = +2
Query: 19 PPRRPHRVDLDSPVRTAGVQSPSHPPS-PPPPPSP 52
PP P V+ P A Q+P HPP P PPPSP
Sbjct: 305 PPPPPPCVEPPPPSSPAPHQTPYHPPPSPSPPPSP 409
Score = 31.2 bits (69), Expect = 1.5
Identities = 23/71 (32%), Positives = 29/71 (40%), Gaps = 10/71 (14%)
Frame = +2
Query: 12 PMRQRISPPRRPHRVDLDSPVRTAGVQSPS---HPPSPPP-----PPSPSQVGSRE--HS 61
P+ +SPP P PV + SP PP PPP PP PS + +
Sbjct: 197 PVYPYLSPPPPPPVHSPPPPVYSPPPPSPPPCVEPPPPPPPPCVEPPPPSSPAPHQTPYH 376
Query: 62 PGNSPAPEQQP 72
P SP+P P
Sbjct: 377 PPPSPSPPPSP 409
Score = 30.4 bits (67), Expect = 2.5
Identities = 19/56 (33%), Positives = 23/56 (40%), Gaps = 2/56 (3%)
Frame = +2
Query: 19 PPRRPHRVDLDSPVRTAGVQSPSHPPSPPPPP--SPSQVGSREHSPGNSPAPEQQP 72
PP P +PV + P + SPPPPP SP P +SP P P
Sbjct: 41 PPNSPPPPPPPAPVFSPPPPVPYYYSSPPPPPAHSPPPPPXSPPPPPHSPTPPVYP 208
Score = 29.3 bits (64), Expect = 5.5
Identities = 14/23 (60%), Positives = 16/23 (68%), Gaps = 2/23 (8%)
Frame = +2
Query: 37 VQSPSHPP--SPPPPPSPSQVGS 57
V+SP PP SPPPPP P+ V S
Sbjct: 20 VRSPPPPPPNSPPPPPPPAPVFS 88
Score = 29.3 bits (64), Expect = 5.5
Identities = 18/54 (33%), Positives = 19/54 (34%)
Frame = +2
Query: 19 PPRRPHRVDLDSPVRTAGVQSPSHPPSPPPPPSPSQVGSREHSPGNSPAPEQQP 72
PP P V P SP PP+ PPP P HSP P P
Sbjct: 59 PPPPPAPVFSPPPPVPYYYSSPPPPPAHSPPPPPXSPPPPPHSPTPPVYPYLSP 220
Score = 28.9 bits (63), Expect = 7.2
Identities = 16/45 (35%), Positives = 19/45 (41%), Gaps = 8/45 (17%)
Frame = +2
Query: 32 VRTAGVQSPSHPPSP--------PPPPSPSQVGSREHSPGNSPAP 68
VR+ P+ PP P PPPP P S P +SP P
Sbjct: 20 VRSPPPPPPNSPPPPPPPAPVFSPPPPVPYYYSSPPPPPAHSPPP 154
>AW695759 weakly similar to PIR|A96523|A965 hypothetical protein F11A17.14
[imported] - Arabidopsis thaliana, partial (13%)
Length = 651
Score = 38.9 bits (89), Expect = 0.007
Identities = 27/91 (29%), Positives = 41/91 (44%), Gaps = 12/91 (13%)
Frame = +3
Query: 27 DLDSPVRTAGVQ------SPSHPPSPPPPPSPSQVGSREHSP------GNSPAPEQQPAV 74
DLDS R A + PS+PP PPPP P +V + P + A E +
Sbjct: 150 DLDSLERDAFQKIAQLRSHPSNPPPPPPPSRPQRVDALPQGPARPLPNNTNNAVEHSKEL 329
Query: 75 TQEQWRHLMRSIGNIQQRNEHLQAQLDFYRR 105
T+ + + S GNI + ++ Q + +RR
Sbjct: 330 TKASVKFFLHSTGNIAAKFQYDQVIVAAFRR 422
>TC82269 weakly similar to GP|14581464|gb|AAK31804.1 protocadherin 15 {Homo
sapiens}, partial (1%)
Length = 728
Score = 37.0 bits (84), Expect = 0.027
Identities = 26/83 (31%), Positives = 35/83 (41%), Gaps = 3/83 (3%)
Frame = +2
Query: 2 ETRRRKQHHS-PMRQRISPPRRPHRVDLDSPVRTAGVQSPSHPPSPPPPPSPSQVGSRE- 59
ET Q+H P + PP SP+ Q PS PP+PP PP PS++ +
Sbjct: 116 ETGSHSQNHQLPSLSHLLPPSST------SPIPQISHQPPSPPPTPPNPPPPSKMKTLNP 277
Query: 60 -HSPGNSPAPEQQPAVTQEQWRH 81
HSP S ++Q H
Sbjct: 278 VHSPKWSNNSSTNATISQTTDTH 346
>TC82364 similar to GP|20268740|gb|AAM14073.1 unknown protein {Arabidopsis
thaliana}, partial (39%)
Length = 1174
Score = 36.6 bits (83), Expect = 0.035
Identities = 27/86 (31%), Positives = 34/86 (39%), Gaps = 12/86 (13%)
Frame = +3
Query: 9 HHSPMRQRISPPRRPHRVDLDS------PVRTAGVQSPSHPPSPPPPPSPSQVGSREHSP 62
H S +S P R +S P+ V P P PPPP SQ S P
Sbjct: 60 HPSHFHSPLSHPFRSFSSSSESNPLFQQPIPIQPVSYPVKPQDPPPPEPESQPSSDTQPP 239
Query: 63 ------GNSPAPEQQPAVTQEQWRHL 82
N+P PEQ A T+E R++
Sbjct: 240 PPPPQASNTPIPEQPRAWTREDIRYV 317
>TC89839 homologue to SP|P23466|CYAA_SACKL Adenylate cyclase (EC 4.6.1.1)
(ATP pyrophosphate-lyase) (Adenylyl cyclase). [Yeast],
partial (0%)
Length = 665
Score = 36.6 bits (83), Expect = 0.035
Identities = 18/42 (42%), Positives = 22/42 (51%), Gaps = 1/42 (2%)
Frame = +3
Query: 396 PEAPKYHPRDANPKKWCEFHRSA-GHDTDDCWTLHREIDKLI 436
P P P P C FH+ A GHDT+ C+ L E+ KLI
Sbjct: 453 PRVPNSLPPWYRPDLNCVFHQGAPGHDTEQCYPLKEEVQKLI 578
>BQ144502 weakly similar to GP|6523547|emb hydroxyproline-rich glycoprotein
DZ-HRGP {Volvox carteri f. nagariensis}, partial (39%)
Length = 1358
Score = 36.6 bits (83), Expect = 0.035
Identities = 23/68 (33%), Positives = 27/68 (38%), Gaps = 5/68 (7%)
Frame = -2
Query: 11 SPMRQRISPPRRPHRVDLDSPVRTAGVQSPSHPPSPPP-----PPSPSQVGSREHSPGNS 65
S +R R SPP P P +P PP PPP PP P + + P S
Sbjct: 235 SRLRPRASPPPPP-------PPPGPAASAPPRPPPPPPPPPQRPPPPPPPHTHQPEPPTS 77
Query: 66 PAPEQQPA 73
P Q PA
Sbjct: 76 PPRRQPPA 53
Score = 36.6 bits (83), Expect = 0.035
Identities = 25/71 (35%), Positives = 30/71 (42%), Gaps = 4/71 (5%)
Frame = -3
Query: 9 HHSPMRQRISPPRRPHRVDLDSPVRTAGVQS--PSHPPSPPPPPSPSQVGSR--EHSPGN 64
H +P R PP RP SP + A + P H P PP PP P +G R H P +
Sbjct: 300 HPAPRRPWTGPPPRPRP---HSP*QAACGRGHPPRHRPPPPGPPPPPPLGPRPPPHPPRS 130
Query: 65 SPAPEQQPAVT 75
P P T
Sbjct: 129 GPPRPHPPTRT 97
Score = 35.8 bits (81), Expect = 0.059
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = -3
Query: 19 PPRRPHRVDLDSPVRTAGVQSPSHPPSPPPPPSPSQVGSREHSPGNSPAPEQQPA 73
P RP R P T+ P+ PP+P PP SPS + R +P +P P + PA
Sbjct: 609 PGARPSRPSRYIPPPTS--PPPASPPAPVPPQSPSTI--RGRAPPPAPPPRRPPA 457
Score = 34.7 bits (78), Expect = 0.13
Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = -1
Query: 12 PMRQRISPPRRPHRVDLDSPVRTAGVQSPSHPPSP-PPPPSPSQVGSREHSPGNSPAP 68
P+ ++I RP V L VR A P PP P PPPPSP + + + P P
Sbjct: 641 PLAKKIGGQPRPALVPL---VRVATYPRPPRPPPPVPPPPSPPRAPPQSEAAPPPPPP 477
Score = 34.7 bits (78), Expect = 0.13
Identities = 22/64 (34%), Positives = 26/64 (40%)
Frame = -2
Query: 10 HSPMRQRISPPRRPHRVDLDSPVRTAGVQSPSHPPSPPPPPSPSQVGSREHSPGNSPAPE 69
H+P ++PPR+ SP R P H P P PPP P P PAP
Sbjct: 577 HTPAH--LAPPRQ-------SP-RPRPPPEPLHNPRPRPPPRPPPAAPARAPPSGPPAPP 428
Query: 70 QQPA 73
PA
Sbjct: 427 TPPA 416
Score = 33.9 bits (76), Expect = 0.22
Identities = 21/77 (27%), Positives = 30/77 (38%), Gaps = 2/77 (2%)
Frame = -3
Query: 5 RRKQHHSPMRQRISPPRRPHRVDLDSPVRTAGVQSPSHPPS--PPPPPSPSQVGSREHSP 62
RR + + + PPR R +R + Q PS P PPPPP P P
Sbjct: 825 RRSIVRARAARAVRPPRTAQRHPPRRTLRASAAQHPSRAPRRHPPPPPPP--------PP 670
Query: 63 GNSPAPEQQPAVTQEQW 79
+ P +P+ + W
Sbjct: 669 SSPPGMGTRPSCQENWW 619
Score = 32.0 bits (71), Expect = 0.85
Identities = 19/58 (32%), Positives = 25/58 (42%)
Frame = -3
Query: 1 METRRRKQHHSPMRQRISPPRRPHRVDLDSPVRTAGVQSPSHPPSPPPPPSPSQVGSR 58
+ R + P + PPRR R A + P PP PPPP SP +G+R
Sbjct: 813 VRARAARAVRPPRTAQRHPPRRTLRASAAQHPSRAPRRHPPPPP-PPPPSSPPGMGTR 643
Score = 31.2 bits (69), Expect = 1.5
Identities = 18/60 (30%), Positives = 24/60 (40%)
Frame = -2
Query: 14 RQRISPPRRPHRVDLDSPVRTAGVQSPSHPPSPPPPPSPSQVGSREHSPGNSPAPEQQPA 73
R+ + P R + +S A + P P P PPP P H+P P P PA
Sbjct: 631 RKLVGSPARRSSLSSESLHTPAHLAPPRQSPRPRPPPEPL------HNPRPRPPPRPPPA 470
Score = 30.8 bits (68), Expect = 1.9
Identities = 22/61 (36%), Positives = 26/61 (42%), Gaps = 5/61 (8%)
Frame = -1
Query: 19 PPRRPHRVDLDSPVRTAGVQSPSHPPSPPP-----PPSPSQVGSREHSPGNSPAPEQQPA 73
PPR P V A QS + PP PPP P +P + S G+ AP Q A
Sbjct: 566 PPRPPPPVPPPPSPPRAPPQSEAAPPPPPPPRGARPRAPLRPPSAPDPAGHPRAPRQGVA 387
Query: 74 V 74
V
Sbjct: 386 V 384
Score = 30.4 bits (67), Expect = 2.5
Identities = 22/65 (33%), Positives = 26/65 (39%), Gaps = 4/65 (6%)
Frame = -3
Query: 12 PMRQRISPPRRPHRVDLDSPVRTAGVQSPSHPP-SPPP---PPSPSQVGSREHSPGNSPA 67
P R R PP P P G + P HPP S PP PP+ + + P SP
Sbjct: 213 PPRHRPPPPGPP-------PPPPLGPRPPPHPPRSGPPRPHPPTRTSLSPPPPPPAASPP 55
Query: 68 PEQQP 72
P P
Sbjct: 54 PPAPP 40
Score = 29.6 bits (65), Expect = 4.2
Identities = 16/59 (27%), Positives = 23/59 (38%), Gaps = 10/59 (16%)
Frame = -1
Query: 19 PPRRPHRVDLDSPVRTAGVQSPSHPP----------SPPPPPSPSQVGSREHSPGNSPA 67
PP P L P G+ + PP +P PPP+P +P ++PA
Sbjct: 269 PPPAPGPTPLSKPPAAEGIPPATAPPPRARRLRPPSAPAPPPTPPAAAPPAPTPPHAPA 93
Score = 29.3 bits (64), Expect = 5.5
Identities = 20/59 (33%), Positives = 25/59 (41%), Gaps = 2/59 (3%)
Frame = -3
Query: 17 ISPPRRPHRVDLDSPVRTAGVQSPS--HPPSPPPPPSPSQVGSREHSPGNSPAPEQQPA 73
I PP P +PV QSPS +PPP P P + +R P P + PA
Sbjct: 576 IPPPTSPPPASPPAPVPP---QSPSTIRGRAPPPAPPPRRPPARPPPAPQRPRPRRPPA 409
Score = 28.9 bits (63), Expect = 7.2
Identities = 15/36 (41%), Positives = 17/36 (46%)
Frame = -2
Query: 33 RTAGVQSPSHPPSPPPPPSPSQVGSREHSPGNSPAP 68
R GVQSP P+ P PP P R P +P P
Sbjct: 349 RHTGVQSPVPCPALPHPPGPPPPLDRAPPPPPAPLP 242
>TC79800 similar to SP|O43280|TREA_HUMAN Trehalase precursor (EC 3.2.1.28)
(Alpha alpha-trehalase) (Alpha alpha-trehalose
glucohydrolase)., partial (2%)
Length = 654
Score = 36.6 bits (83), Expect = 0.035
Identities = 26/90 (28%), Positives = 36/90 (39%), Gaps = 9/90 (10%)
Frame = -3
Query: 4 RRRKQHHSPMRQRISPPRRPHRVDLDSPVRTAGVQSPSHPPSP---------PPPPSPSQ 54
R Q H P + ++S ++PH + L S P H P P PPP SP Q
Sbjct: 559 RENPQLH-PRKNQLS--QQPHPLHLSSTTHQPLHLHPHHQPLPSSSPQKHHNPPPASPQQ 389
Query: 55 VGSREHSPGNSPAPEQQPAVTQEQWRHLMR 84
+ H+ P P +P + Q R R
Sbjct: 388 PSTASHTDHAYPPPSTKPGRREHQRREKQR 299
>TC93249 weakly similar to GP|13877617|gb|AAK43886.1 protein kinase-like
protein {Arabidopsis thaliana}, partial (5%)
Length = 669
Score = 36.2 bits (82), Expect = 0.045
Identities = 20/43 (46%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +3
Query: 28 LDSPVRTAGVQSPSHPP--SPPPPPSPSQVGSREHSPGNSPAP 68
L S VRT+ + S PP S PPPP PS S SP ++P P
Sbjct: 66 LTSSVRTSSSATSSTPPKFSKPPPPPPSPTTSPTSSPFSAPLP 194
>TC77786
Length = 1094
Score = 35.8 bits (81), Expect = 0.059
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +3
Query: 410 KWCEFHRSAGHDTDDCWTLHREIDKLIR 437
K C +HRS GHDT++C+ L I+ LI+
Sbjct: 819 K*CCYHRSRGHDTEECFQLREAIEDLIK 902
>BQ151174 similar to GP|11036868|gb| PxORF73 peptide {Plutella xylostella
granulovirus}, partial (42%)
Length = 909
Score = 35.8 bits (81), Expect = 0.059
Identities = 24/74 (32%), Positives = 32/74 (42%), Gaps = 11/74 (14%)
Frame = +2
Query: 10 HSPMRQRISPPRRPHRVDLDSPVRTAGVQSPSHPPSPPPPPSP-----------SQVGSR 58
H P R R P +P+ D P +T P PP P PP+P S G R
Sbjct: 143 HPPPRPRPPRPPQPNHQH-DKPQKTTHPHHPHTPPPTPHPPNPPPNHPNHPTTRSAHGPR 319
Query: 59 EHSPGNSPAPEQQP 72
H PG++P ++P
Sbjct: 320 NH-PGDAPHRRRRP 358
Score = 30.4 bits (67), Expect = 2.5
Identities = 17/62 (27%), Positives = 24/62 (38%), Gaps = 5/62 (8%)
Frame = +2
Query: 12 PMRQRISPPRRPHRVD-----LDSPVRTAGVQSPSHPPSPPPPPSPSQVGSREHSPGNSP 66
P ++R P P+R + P + SHPP P PP P Q + P +
Sbjct: 38 PPKKRTPKPETPNRKKPQKNKKEPPKKRKTPPEASHPPPRPRPPRPPQPNHQHDKPQKTT 217
Query: 67 AP 68
P
Sbjct: 218HP 223
Score = 30.4 bits (67), Expect = 2.5
Identities = 18/64 (28%), Positives = 24/64 (37%), Gaps = 1/64 (1%)
Frame = +2
Query: 10 HSPMRQRISPPRRPHRVDLDSPV-RTAGVQSPSHPPSPPPPPSPSQVGSREHSPGNSPAP 68
H P P R R + P R G Q P PPPPP + + + PG+
Sbjct: 308 HGPRNHPGDAPHRRRRPNKPGPPPRRGGGQGGRAPAPPPPPPKAREGRTPKPDPGSKENH 487
Query: 69 EQQP 72
+ P
Sbjct: 488 NRTP 499
Score = 30.4 bits (67), Expect = 2.5
Identities = 18/67 (26%), Positives = 29/67 (42%)
Frame = +1
Query: 2 ETRRRKQHHSPMRQRISPPRRPHRVDLDSPVRTAGVQSPSHPPSPPPPPSPSQVGSREHS 61
E +KQ +P +++ +PPR P PP PPP P++ +R+
Sbjct: 79 EEATKKQKRAPEKKK-NPPRG----------------QPPPPPPPPPQAPPTKPPTRQTP 207
Query: 62 PGNSPAP 68
N+P P
Sbjct: 208 KNNTPPP 228
Score = 30.0 bits (66), Expect = 3.2
Identities = 20/72 (27%), Positives = 26/72 (35%), Gaps = 9/72 (12%)
Frame = +2
Query: 10 HSPMRQRISPPRRPHRVDLDSPVRTAGVQSPSHP---------PSPPPPPSPSQVGSREH 60
H P ++ +PP P R + G P HP P PPPP S+ G R
Sbjct: 521 HGPPEKK-TPPPTPKRRGKHTKRAPGGGPPPPHPGRGGGGPGGPPPPPPKKNSERGGRAA 697
Query: 61 SPGNSPAPEQQP 72
G + P
Sbjct: 698 PRGRPGTKRKNP 733
Score = 28.5 bits (62), Expect = 9.4
Identities = 18/74 (24%), Positives = 32/74 (42%)
Frame = +3
Query: 5 RRKQHHSPMRQRISPPRRPHRVDLDSPVRTAGVQSPSHPPSPPPPPSPSQVGSREHSPGN 64
R+K+H P ++ ++ R + P AG P PPPP ++ G E P
Sbjct: 531 RKKKHPPPHQKEGGNTQKEPRGEDPPPHTPAGGGGGPGGPRPPPPKKTAR-GGEERPPAG 707
Query: 65 SPAPEQQPAVTQEQ 78
+ A ++ Q++
Sbjct: 708 ARARREKTRGDQQE 749
>AW697042 similar to GP|13122418|dbj putative glycin-rich protein {Oryza
sativa (japonica cultivar-group)}, partial (11%)
Length = 730
Score = 35.8 bits (81), Expect = 0.059
Identities = 22/71 (30%), Positives = 30/71 (41%), Gaps = 2/71 (2%)
Frame = -2
Query: 5 RRKQHHSPMRQRISPPRRPHRVDLDSPVRTAGVQSPSHPPSPPP--PPSPSQVGSREHSP 62
RR +P + PP P SP ++ + P PP+PPP P P+ + P
Sbjct: 720 RRPPPPTPPPRPTPPPYPPLPY---SPTTSSHLSKPPPPPTPPPLPPHPPTHYSASSQCP 550
Query: 63 GNSPAPEQQPA 73
SP P PA
Sbjct: 549 APSPTPPTAPA 517
>TC77694 homologue to PIR|T09704|T09704 probable arginine/serine-rich
splicing factor - alfalfa, partial (95%)
Length = 1494
Score = 35.8 bits (81), Expect = 0.059
Identities = 26/70 (37%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = +3
Query: 5 RRKQHHSPMRQRISPPRRPHRVDLDSPVRTAGVQSPSHPPSPPPPPSPSQVGS--REHSP 62
R + H R+ SP R VD SPVR + + P PSP PSP + S R SP
Sbjct: 564 RGRGRHDDERRSRSPSRS---VDSRSPVRRSSI--PKRSPSPKRSPSPKRSPSLKRSISP 728
Query: 63 GNSPAPEQQP 72
S +P + P
Sbjct: 729 QKSVSPRKSP 758
>BQ144306 weakly similar to GP|23093252|gb| CG13731-PA {Drosophila
melanogaster}, partial (4%)
Length = 1261
Score = 35.8 bits (81), Expect = 0.059
Identities = 23/64 (35%), Positives = 28/64 (42%), Gaps = 4/64 (6%)
Frame = -1
Query: 19 PPRRPHRVDLDSPVRTAGVQSPSHPPSPPPP----PSPSQVGSREHSPGNSPAPEQQPAV 74
PP PH + L SP HPP PPPP P P Q + +P P P+
Sbjct: 496 PPPPPHTLHLPSP--------RQHPPRPPPPTRQRPHPPQPTPTPNLRATTPLP-HPPSP 344
Query: 75 TQEQ 78
TQ+Q
Sbjct: 343 TQKQ 332
Score = 30.0 bits (66), Expect = 3.2
Identities = 22/70 (31%), Positives = 29/70 (41%)
Frame = -3
Query: 3 TRRRKQHHSPMRQRISPPRRPHRVDLDSPVRTAGVQSPSHPPSPPPPPSPSQVGSREHSP 62
TR R H+ R+ P R + L P T +PS P SPPP P + + P
Sbjct: 587 TRDRDNSHN---LRVQLPHRYSLLALLFP--TLPPPAPSSPHSPPPLPQTTPTPTPTTHP 423
Query: 63 GNSPAPEQQP 72
+P P P
Sbjct: 422 TTTPPPATDP 393
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.316 0.133 0.390
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,967,978
Number of Sequences: 36976
Number of extensions: 317445
Number of successful extensions: 9913
Number of sequences better than 10.0: 324
Number of HSP's better than 10.0 without gapping: 4207
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6869
length of query: 719
length of database: 9,014,727
effective HSP length: 103
effective length of query: 616
effective length of database: 5,206,199
effective search space: 3207018584
effective search space used: 3207018584
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)
Lotus: description of TM0012a.8