TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0012a.3
         (952 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC83149 similar to GP|13561982|gb|AAK30594.1 flagelliform silk p...    44  2e-04
TC81882 similar to GP|9759349|dbj|BAB10004.1 contains similarity...    42  9e-04
TC86628 similar to PIR|T08971|T08971 hypothetical protein F19B15...    40  0.004
TC78703 homologue to GP|13129456|gb|AAK13114.1 Putative retroele...    39  0.009
TC91646 weakly similar to GP|6523547|emb|CAB62280.1 hydroxyproli...    39  0.009
TC88229 similar to PIR|E84471|E84471 probable beta-1 3-glucanase...    38  0.016
TC78495 homologue to PIR|S53504|S53504 extensin-like protein S3 ...    38  0.021
TC85251 homologue to PIR|JQ2128|JQ2128 metallothionein - soybean...    37  0.028
BQ750979 similar to GP|13883467|gb PE_PGRS family protein {Mycob...    37  0.028
BQ141932 weakly similar to GP|6523547|emb hydroxyproline-rich gl...    37  0.036
TC93234 weakly similar to GP|21751020|dbj|BAC03887. unnamed prot...    37  0.047
TC90796 similar to GP|3395431|gb|AAC28763.1| unknown protein {Ar...    37  0.047
TC83962 similar to PIR|B86289|B86289 hypothetical protein AAF719...    37  0.047
TC88762 similar to GP|22136928|gb|AAM91808.1 unknown protein {Ar...    37  0.047
BQ751144 weakly similar to PIR|PQ0479|PQ04 pistil extensin-like ...    36  0.061
TC76514 homologue to PIR|T09648|T09648 nucleolin homolog nuM1 - ...    36  0.080
TC77148 ENOD20                                                         36  0.080
TC76989 homologue to SP|O24310|EFTU_PEA Elongation factor Tu  ch...    36  0.080
TC91221 similar to GP|21553718|gb|AAM62811.1 unknown {Arabidopsi...    35  0.10
AW689097 weakly similar to PIR|T47565|T47 hypothetical protein F...    35  0.10

>TC83149 similar to GP|13561982|gb|AAK30594.1 flagelliform silk protein
           {Argiope trifasciata}, partial (3%)
          Length = 1177

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 41/127 (32%), Positives = 47/127 (36%), Gaps = 3/127 (2%)
 Frame = +3

Query: 484 SSNPLTPIPE---SQPAEQTTSPPHSPRSSFFQPSPTEAPLWNLLQNQPSRSDEPTSLLT 540
           S  PL P P      P     SPP   RS     SP   PLW      P R+  P S   
Sbjct: 153 SKTPLPPPPPPLPQHPKPPQKSPPRMRRSKPSPSSPAATPLW------PQRTTPPPS--- 305

Query: 541 IPYDPLSSEPIIHEQPEPNQTEPQPRTSDHSAPRASARPAARTTDTDSSTAFTPVSFPIN 600
            P  P  S P     P  + T P P       PR +  PA        ST  TP   P++
Sbjct: 306 -PSTPRPS-P*TPATPSTSPTAPLPT----PPPRTTLPPALTPRPPSPSTPPTPKPGPVS 467

Query: 601 VVDSSPS 607
           V  +SPS
Sbjct: 468 VSPASPS 488



 Score = 35.0 bits (79), Expect = 0.14
 Identities = 50/216 (23%), Positives = 80/216 (36%), Gaps = 3/216 (1%)
 Frame = +3

Query: 489 TPIPESQPAEQTTSPPHSPRSSFFQPSPTEAPLWNLLQNQPSRSDEPTSLLTIPYDPLSS 548
           TP+  + P   ++  P +PR+S  + +P+ +P           S  P S   +P  P   
Sbjct: 45  TPLRSTPPTRPSSPTPSAPRTS-SRSTPSTSP-----------SRRPRSKTPLPPPP--- 179

Query: 549 EPIIHEQPEPNQ-TEPQPRTSDHSAPRASARPAARTTDTDSSTAFTPVSFPINVVDSSPS 607
            P + + P+P Q + P+ R S  S    +A P      T   +  TP   P      +P+
Sbjct: 180 -PPLPQHPKPPQKSPPRMRRSKPSPSSPAATPLWPQRTTPPPSPSTPRPSP-----*TPA 341

Query: 608 NNSESIRKFMEVRKEKVSALEEYYLTCPSPRRYPGPRPERL-VDPDEPILANPIQEADPL 666
             S S    +     + +         PSP   P P+P  + V P  P     +      
Sbjct: 342 TPSTSPTAPLPTPPPRTTLPPALTPRPPSPSTPPTPKPGPVSVSPASPSATQRVPWRPTA 521

Query: 667 VQQAHPVPDQQEPIQPDPEPEQSVSNQSSVRS-PHP 701
              +  VP   +P +       +VS  S VR   HP
Sbjct: 522 RASSTKVPAAAKP*RRATRRPSAVSRSSRVRRLTHP 629



 Score = 29.3 bits (64), Expect = 7.5
 Identities = 45/202 (22%), Positives = 70/202 (34%), Gaps = 4/202 (1%)
 Frame = +3

Query: 545 PLSSEPIIHEQPEPNQTEPQPRTSDHSAPRASARPAARTTDTDSSTAFTPVSFPINVVDS 604
           P +S       P  +    +P +   SAPR S+R    T+ +    + TP+  P   +  
Sbjct: 15  PSTSPSYASRTPLRSTPPTRPSSPTPSAPRTSSRSTPSTSPSRRPRSKTPLPPPPPPLPQ 194

Query: 605 SPSNNSESIRKFMEVRKEKVSALEEYYLTCPSPRRYPGPRPERLVDPDEPILANPI--QE 662
            P    +S  +   +R+ K S         PS        P+R   P  P    P     
Sbjct: 195 HPKPPQKSPPR---MRRSKPS---------PSSPAATPLWPQRTTPPPSPSTPRPSP*TP 338

Query: 663 ADPLVQQAHPVPDQQEPIQPDPEPEQSVSNQSSVRSPHPLV-ETSDPHLGTSEPNAPMIN 721
           A P      P+        P P P  ++    + R P P    T  P   +  P +P   
Sbjct: 339 ATPSTSPTAPL--------PTPPPRTTLPPALTPRPPSPSTPPTPKPGPVSVSPASPSAT 494

Query: 722 IGSP-QGASEAHSSNHPASPAP 742
              P +  + A S+  PA+  P
Sbjct: 495 QRVPWRPTARASSTKVPAAAKP 560


>TC81882 similar to GP|9759349|dbj|BAB10004.1 contains similarity to unknown
           protein~gb|AAF72944.1~gene_id:MAH20.11 {Arabidopsis
           thaliana}, partial (5%)
          Length = 875

 Score = 42.4 bits (98), Expect = 9e-04
 Identities = 25/76 (32%), Positives = 36/76 (46%)
 Frame = +3

Query: 490 PIPESQPAEQTTSPPHSPRSSFFQPSPTEAPLWNLLQNQPSRSDEPTSLLTIPYDPLSSE 549
           P P   PA     P  +P ++   PS    P  NL +N P+ S  PT+  T    P++ +
Sbjct: 111 PCPPPNPAISAAEPTQTPTTTLLPPSLPNPPPLNL-KNPPNFSVSPTTKST----PIT-K 272

Query: 550 PIIHEQPEPNQTEPQP 565
           P++H  P P  T P P
Sbjct: 273 PLVHAPPNPTTTAPNP 320


>TC86628 similar to PIR|T08971|T08971 hypothetical protein F19B15.190 -
           Arabidopsis thaliana, partial (88%)
          Length = 743

 Score = 40.0 bits (92), Expect = 0.004
 Identities = 35/122 (28%), Positives = 59/122 (47%), Gaps = 11/122 (9%)
 Frame = +3

Query: 802 QVPIMMQLLHAEGS----QSIEAAKQRFARRVALHE---LEQRNKLLEAIEEAKRKKEQA 854
           Q+ I  Q++  EG+    ++++A +   A   A+ +   ++  +K ++ I E     +Q 
Sbjct: 378 QLRIHDQMIMLEGAKATTETVDALRTGAATMKAMQKATNIDDVDKTMDEINEQTENMKQI 557

Query: 855 EEAARQ---AAAQAEQARLEAERLEAEAEALRCQALAPVVFTPAASASIP-DPQAAQNVP 910
           +EA      AAA  ++  LEAE  E E+  L  Q L P    PA S  +P   Q A+  P
Sbjct: 558 QEALSAPIGAAADFDEDELEAELEELESAELEEQLLQPTFTAPAPSMQVPAGRQPARPAP 737

Query: 911 SS 912
           +S
Sbjct: 738 AS 743


>TC78703 homologue to GP|13129456|gb|AAK13114.1 Putative retroelement pol
           polyprotein {Oryza sativa} [Oryza sativa (japonica
           cultivar-group)], partial (2%)
          Length = 1235

 Score = 38.9 bits (89), Expect = 0.009
 Identities = 28/81 (34%), Positives = 39/81 (47%), Gaps = 8/81 (9%)
 Frame = +3

Query: 478 SALLQHSSNPLTPIPESQPAEQTTSPPHSP--RSSFFQPSP------TEAPLWNLLQNQP 529
           S L  HSS+ LTPIP   P   +++PP SP    SF  PSP      T  P+  +  + P
Sbjct: 534 SPLSSHSSDALTPIPPPSPLNGSSTPP-SPVLDGSFPPPSPLDGSTLTPPPVQQVGSSPP 710

Query: 530 SRSDEPTSLLTIPYDPLSSEP 550
               + T+ +T    P+S  P
Sbjct: 711 PLGTDVTNPITPTQSPVSEPP 773


>TC91646 weakly similar to GP|6523547|emb|CAB62280.1 hydroxyproline-rich
           glycoprotein DZ-HRGP {Volvox carteri f. nagariensis},
           partial (15%)
          Length = 984

 Score = 38.9 bits (89), Expect = 0.009
 Identities = 32/105 (30%), Positives = 44/105 (41%), Gaps = 9/105 (8%)
 Frame = +1

Query: 486 NPLTPIPESQPAEQTTSPPH--------SPRSSFFQPSPTEAPLWNLLQNQPSRSDEPTS 537
           +PL   P  +P+    SP          +P S    PSPT +P        P RS  P  
Sbjct: 232 SPLMEAPSPRPSPSPLSPLRFPSRLPLTTPPSLTTSPSPTASPPPRSPPRPPPRSP-PRQ 408

Query: 538 LLTIPYD-PLSSEPIIHEQPEPNQTEPQPRTSDHSAPRASARPAA 581
           L++ P   P S  P     PE ++T P PR     +P  ++ PAA
Sbjct: 409 LMSPPRPLPRSPSPPPRNPPELSRTTPTPRPPMSPSPSPTSPPAA 543



 Score = 32.0 bits (71), Expect = 1.2
 Identities = 31/115 (26%), Positives = 43/115 (36%), Gaps = 5/115 (4%)
 Frame = +3

Query: 487 PLTPIPESQPAEQTTSPPHSPRSSFFQPS--PTEAPLWNLLQNQPSRSDEPTSLLTIPYD 544
           P+T      P E TT          F  S   TE P     +   + +DEPT   T    
Sbjct: 267 PVTTESTEIPIEVTTDDTSFTDDFSFTDSVTATEEPTETATEEPATTTDEPTETSTEEPI 446

Query: 545 PLSSEPIIHEQPEPNQTEPQPRTSDHSAPRAS---ARPAARTTDTDSSTAFTPVS 596
             + EP      +PN T      S    P  S   + P+A TT T+++T    V+
Sbjct: 447 TSTEEPTGTVTDDPNTTASDESFSFTDVPTGSDSTSVPSATTTGTETATPSATVA 611


>TC88229 similar to PIR|E84471|E84471 probable beta-1 3-glucanase [imported]
           - Arabidopsis thaliana, partial (69%)
          Length = 1368

 Score = 38.1 bits (87), Expect = 0.016
 Identities = 38/121 (31%), Positives = 52/121 (42%), Gaps = 9/121 (7%)
 Frame = +2

Query: 483 HSSNPLTPIPESQPAEQTTSPPHSPRSSFFQPSPTEAPLWNLLQNQPSRSDEPTSLLTIP 542
           H      P+  +  A QTT P HS  SSF           N  ++  S S  PT L + P
Sbjct: 83  HYLQMAVPLE*TMVA*QTTYPQHSK*SSF----------*NHKESTGSNSTTPTRLFSNP 232

Query: 543 Y-DPLSSEPIIHE------QPE--PNQTEPQPRTSDHSAPRASARPAARTTDTDSSTAFT 593
           Y DP S  P   +      QPE  P  +    +TS  + P+  ++P+   T + SST  T
Sbjct: 233 YPDPESK*P*TSQTNNSFTQPENSPTPSHGSKKTSSFTTPKPKSKPSPSATKS-SSTHTT 409

Query: 594 P 594
           P
Sbjct: 410 P 412


>TC78495 homologue to PIR|S53504|S53504 extensin-like protein S3 - alfalfa,
           partial (97%)
          Length = 1049

 Score = 37.7 bits (86), Expect = 0.021
 Identities = 40/127 (31%), Positives = 49/127 (38%), Gaps = 4/127 (3%)
 Frame = +3

Query: 636 SPRRYPGP-RPERLVDPDEPILANP-IQEADPLVQQAHPVPDQQEPIQPDPEPEQSVSNQ 693
           SP   P P  P     P  P  + P +Q + P VQ + P      P+Q  P P QS    
Sbjct: 252 SPNSSPAPPTPPANTPPTTPQASPPPVQSSPPPVQSSPP------PLQSSPPPAQSTPPP 413

Query: 694 SSVRSPHPLVETSDPHLGTSEPNAPMINIGSPQGASEAHSSNHPASPAPNL--SIIPYTH 751
               SP P+ ++  P   T  P        SP  AS    S  PA+P P       P   
Sbjct: 414 VQ-SSPPPVQQSPPPTPLTPPPVQSTPPPASPPPASPPPFSPPPATPPPATPPPATPPPA 590

Query: 752 LQPTSLS 758
           L PT LS
Sbjct: 591 LTPTPLS 611



 Score = 37.0 bits (84), Expect = 0.036
 Identities = 41/156 (26%), Positives = 55/156 (34%), Gaps = 11/156 (7%)
 Frame = +3

Query: 447 PPARVTRSSAHSSKPALTSDDDLNLFDALPISALLQHSSNPLTPIPESQPAEQTTSPPHS 506
           PP + +     SS P L S          P+ +          P P + P  Q+T PP S
Sbjct: 324 PPVQSSPPPVQSSPPPLQSSPPPAQSTPPPVQSSPPPVQQSPPPTPLTPPPVQSTPPPAS 503

Query: 507 PRSSF---FQPSPTEAPLWNLLQNQPSRSDEPTSLLTIPYDPLSSEPIIHEQPEPNQTE- 562
           P  +    F P P   P        P+     T    +   PLSS P     P P + + 
Sbjct: 504 PPPASPPPFSPPPATPP--------PATPPPATPPPALTPTPLSSPPATTPAPAPAKLKS 659

Query: 563 ------PQPRTSDHSAP-RASARPAARTTDTDSSTA 591
                 P    SD  AP  +S  P+   + TD S A
Sbjct: 660 KAPALAPVLSPSDAPAPGLSSLSPSISPSGTDDSGA 767



 Score = 35.0 bits (79), Expect = 0.14
 Identities = 33/142 (23%), Positives = 52/142 (36%), Gaps = 26/142 (18%)
 Frame = +3

Query: 492 PESQPAEQT---TSPPHSPRSSFFQPSPTEAPLWNLLQNQPSRSDEPTSLLTIPYDPLSS 548
           P S PA  T    +PP +P++S   P P ++    +  + P     P    + P    SS
Sbjct: 255 PNSSPAPPTPPANTPPTTPQAS---PPPVQSSPPPVQSSPPPLQSSPPPAQSTPPPVQSS 425

Query: 549 EPIIHEQPEPN-------QTEPQPRTSDHSA----------------PRASARPAARTTD 585
            P + + P P        Q+ P P +   ++                P A+  PA   T 
Sbjct: 426 PPPVQQSPPPTPLTPPPVQSTPPPASPPPASPPPFSPPPATPPPATPPPATPPPALTPTP 605

Query: 586 TDSSTAFTPVSFPINVVDSSPS 607
             S  A TP   P  +   +P+
Sbjct: 606 LSSPPATTPAPAPAKLKSKAPA 671



 Score = 29.6 bits (65), Expect = 5.7
 Identities = 18/71 (25%), Positives = 30/71 (41%)
 Frame = +3

Query: 513 QPSPTEAPLWNLLQNQPSRSDEPTSLLTIPYDPLSSEPIIHEQPEPNQTEPQPRTSDHSA 572
           Q +P+ +P  +     P  +  PT+    P    SS P +   P P Q+ P P  S    
Sbjct: 234 QQAPSTSPNSSPAPPTPPANTPPTTPQASPPPVQSSPPPVQSSPPPLQSSPPPAQSTPPP 413

Query: 573 PRASARPAART 583
            ++S  P  ++
Sbjct: 414 VQSSPPPVQQS 446



 Score = 29.6 bits (65), Expect = 5.7
 Identities = 35/151 (23%), Positives = 54/151 (35%), Gaps = 11/151 (7%)
 Frame = +3

Query: 397 PLVKKTKRKPDDGDDDDSEDGPPQKKKKKVRIVVKPTRVEPAAEVVRRTEPPARVT---- 452
           P   +    P        +  PP  +         P  V+ +   V+++ PP  +T    
Sbjct: 300 PTTPQASPPPVQSSPPPVQSSPPPLQSSPPPAQSTPPPVQSSPPPVQQSPPPTPLTPPPV 479

Query: 453 RSSAHSSKPALTSDDDLNLFDALPISALLQHSSNP--LTPIPESQPAEQTTSPPHSPRSS 510
           +S+   + P   S    +   A P  A    ++ P  LTP P S P   T +P  +   S
Sbjct: 480 QSTPPPASPPPASPPPFSPPPATPPPATPPPATPPPALTPTPLSSPPATTPAPAPAKLKS 659

Query: 511 FFQP-----SPTEAPLWNLLQNQPSRSDEPT 536
                    SP++AP   L    PS S   T
Sbjct: 660 KAPALAPVLSPSDAPAPGLSSLSPSISPSGT 752


>TC85251 homologue to PIR|JQ2128|JQ2128 metallothionein - soybean, partial
           (93%)
          Length = 1554

 Score = 37.4 bits (85), Expect = 0.028
 Identities = 51/259 (19%), Positives = 90/259 (34%), Gaps = 9/259 (3%)
 Frame = -2

Query: 515 SPTEAPLWNLLQNQPSRSDEPTSLLTIPYDPLSSEPIIHEQPEPNQ-TEPQPRTSDHSAP 573
           +PT+ P        P  +  PT    +   P++S+P +   P+    T P P+ +  S+P
Sbjct: 839 APTKLPPTTPTAITPVTTQPPT---VVASPPITSQPPVTVAPKSAPVTSPAPKIAPASSP 669

Query: 574 RASARPAARTTDTDSSTAFTPVSFPINVVDSSPSNNSESIRKFMEVRKEKVSALEEYYLT 633
           +       +++   + T   P+  P                        K+S        
Sbjct: 668 KVPPPQPPKSSPVSTPTLPPPLPPP-----------------------PKISPTPVQTPP 558

Query: 634 CPSPRR---YPGPRPERLVDPDEPILANPIQEADPLVQQAHPVPDQQEPIQPDPEPEQSV 690
            P+P +    P P P +      P  + PI    P ++   P P+  +P +    P+   
Sbjct: 557 APAPVKATPVPAPAPAKQAPTPAPATSPPIPAPTPAIEAPVPAPESSKPKRRRHRPKH-- 384

Query: 691 SNQSSVRSPHPLVETSDPHLGTSEPNAPMINIGSPQGASEAHSSNHPA-SPAPNLSIIPY 749
             +    +P P V    P               +P   + A S   PA +P+ NL+  P 
Sbjct: 383 -RRHQAPAPAPTVIHKSP--------------PAPPTDTTADSDTAPAPAPSFNLNGAPS 249

Query: 750 THLQP----TSLSECINIF 764
            H Q     T++   I +F
Sbjct: 248 NHFQGGNIWTTIGFAITVF 192



 Score = 32.7 bits (73), Expect = 0.68
 Identities = 45/211 (21%), Positives = 71/211 (33%), Gaps = 33/211 (15%)
 Frame = -2

Query: 432 PTRVEPAAEVVRRTEPPARVTRSSAHSSKPALTSDDDLNLFDALPISALLQHSSNPLTPI 491
           PT + P       T+PP  V       + P +TS          P   +   S+   +P 
Sbjct: 812 PTAITPVT-----TQPPTVV-------ASPPITSQ---------PPVTVAPKSAPVTSPA 696

Query: 492 PESQPAEQTTSPPHSPRSSF----------------FQPSPTEAP-------LWNLLQNQ 528
           P+  PA     PP  P  S                   P+P + P          +    
Sbjct: 695 PKIAPASSPKVPPPQPPKSSPVSTPTLPPPLPPPPKISPTPVQTPPAPAPVKATPVPAPA 516

Query: 529 PSRSDEPTSLLTIPYDPLSSEPIIHEQPEPNQTEP-----QPRTSDHSAPRAS-----AR 578
           P++     +  T P  P  +  I    P P  ++P     +P+   H AP  +       
Sbjct: 515 PAKQAPTPAPATSPPIPAPTPAIEAPVPAPESSKPKRRRHRPKHRRHQAPAPAPTVIHKS 336

Query: 579 PAARTTDTDSSTAFTPVSFPINVVDSSPSNN 609
           P A  TDT + +   P   P   ++ +PSN+
Sbjct: 335 PPAPPTDTTADSDTAPAPAPSFNLNGAPSNH 243


>BQ750979 similar to GP|13883467|gb PE_PGRS family protein {Mycobacterium
           tuberculosis CDC1551}, partial (1%)
          Length = 728

 Score = 37.4 bits (85), Expect = 0.028
 Identities = 23/79 (29%), Positives = 34/79 (42%)
 Frame = +1

Query: 347 YVEDLRAQGFEIDLDDFVSRLPPAPEFPSPPKRKAQRKMVLDESSEESDVPLVKKTKRKP 406
           + ++  AQG ++  DDFV      P+ P  P++         ++   S      K KR  
Sbjct: 391 WAQECEAQGSKVAEDDFVVSGLSKPQPPPKPQKAPASAQASKKNGAASQTSAAGK-KRSK 567

Query: 407 DDGDDDDSEDGPPQKKKKK 425
           D    DD  D  PQ KK+K
Sbjct: 568 DVAQSDDEHDVKPQPKKQK 624


>BQ141932 weakly similar to GP|6523547|emb hydroxyproline-rich glycoprotein
           DZ-HRGP {Volvox carteri f. nagariensis}, partial (30%)
          Length = 1338

 Score = 37.0 bits (84), Expect = 0.036
 Identities = 33/112 (29%), Positives = 41/112 (36%), Gaps = 5/112 (4%)
 Frame = -3

Query: 476 PISALLQHSSNPLTPIPESQPAEQTTSPPHSPRSSFFQPS-----PTEAPLWNLLQNQPS 530
           P ++ +     PL P+ +S P      PPHSP  S   PS     PT  PL         
Sbjct: 376 PAASAVPLPLRPLYPLRDSPPRRPPPPPPHSP--SILPPSSRLSPPTPLPL--------- 230

Query: 531 RSDEPTSLLTIPYDPLSSEPIIHEQPEPNQTEPQPRTSDHSAPRASARPAAR 582
            S  P   L +P  P          P P    P P T+   AP A   P +R
Sbjct: 229 -SSSP*PALPLPLPP----------PTPPPPPPAPTTTPI*APAAGYTPESR 107



 Score = 30.4 bits (67), Expect = 3.4
 Identities = 77/351 (21%), Positives = 108/351 (29%), Gaps = 20/351 (5%)
 Frame = -1

Query: 418  PPQKKKKKVRIVVKPTRVEPAAEVVRRTEPPARVTRSSA------HSSKPALTSDDDLNL 471
            PP  +  ++     P  V  +  VVR T P      SSA      H   P LTS      
Sbjct: 1227 PPPARAPRLPRSTHPCSVVSSLVVVRST-PHTLAPISSASPPSPRHRPYPPLTSPHTARY 1051

Query: 472  FDALPISALLQHSSNPLTPIPESQPAEQTTSPPHSP--------RSSFFQPSPTEAPLWN 523
              +L +S    H   P  P+P  +P     S  H P        R +    SP  APL  
Sbjct: 1050 SPSLSLS----HYPAP-RPVP--RPPRAAVSILHLPLPTATTHTRHTHTPLSPRSAPLHL 892

Query: 524  LLQNQPSRSDEPTSLLTIPYDPLSSEPIIHEQPEPNQTEPQP-RTSDHSAPRASARPAAR 582
            L    P+ +     L+          P +  QP   +  PQP RT  H       R AA 
Sbjct: 891  LA---PTFTTNTPPLIATRPRSTDITPTLRGQPPTPRPYPQPLRTRAHVGAYPRLRDAAH 721

Query: 583  TTDTDSSTAFTPVSFPINVVDSSPSNNSESIRKFMEVRKEKVSALEEY---YLTCPS--P 637
                 +  +              P +   S+      R  +V  + +Y   +L   S  P
Sbjct: 720  AVLVKAHRS------------PRPPHVGPSLAHPARPRPGRVLLVMQYPTSFLGTGSAPP 577

Query: 638  RRYPGPRPERLVDPDEPILANPIQEADPLVQQAHPVPDQQEPIQPDPEPEQSVSNQSSVR 697
              +  P P     P    L  P          + P P  + P    P P    ++     
Sbjct: 576  AIHHHPNPPASQSP--ATLNRPTSHTPACPPPSRPPPHPRAPSLSPPPPPHPPTSPPRPG 403

Query: 698  SPHPLVETSDPHLGTSEPNAPMINIGSPQGASEAHSSNHPASPAPNLSIIP 748
             P        PH     P+A   + G P  A        P   +P   + P
Sbjct: 402  RPRSSTLAPPPHRQFHSPSALCTHCGIPPPAVPPPPPPTPPPSSPPALVSP 250



 Score = 28.9 bits (63), Expect = 9.8
 Identities = 26/88 (29%), Positives = 35/88 (39%), Gaps = 1/88 (1%)
 Frame = -2

Query: 434 RVEPAAEVVRRTEPPARVTRSSAHSSKPALTSDDDLNLFDALPISALLQHSSNPLTP-IP 492
           R  P      R  PPA V      S    + S      F  +PI+      S P  P +P
Sbjct: 455 RSPPLRPPTLRPPPPAPVAHGHRPSPPRRIGSSTPPPPF--VPIAGFPPPPSPPPPPPLP 282

Query: 493 ESQPAEQTTSPPHSPRSSFFQPSPTEAP 520
              P + ++ PPH+P SSF  P  +  P
Sbjct: 281 LHPPPQLSSLPPHAP-SSFLLPLTSPPP 201


>TC93234 weakly similar to GP|21751020|dbj|BAC03887. unnamed protein product
           {Homo sapiens}, partial (11%)
          Length = 591

 Score = 36.6 bits (83), Expect = 0.047
 Identities = 44/162 (27%), Positives = 59/162 (36%), Gaps = 2/162 (1%)
 Frame = +2

Query: 443 RRTEPPARVTRSSAHSSKPALTSDDDLNLFDALPISALLQHSSNPLTPIPESQPAEQTTS 502
           R T   A +T SS+  S+ + TS          P S     S+    P   S PA   T+
Sbjct: 149 RATPASASLTSSSSIPSQRSRTSRS--------PSSRPRHTSTGTAPPFAVSSPASSPTT 304

Query: 503 PPHSPRSSFFQPSPTEAPLWNLLQNQPSRSDEPTSLLTIPYDPLSSEPIIHEQPE--PNQ 560
           P  S RSS    S    P  +     P  +  PT        P  S P     P   P+ 
Sbjct: 305 PS-STRSSPGSTSTPRTPSTSFSARPPPSTPPPT--------PFRSRPTKGSSPSSTPSS 457

Query: 561 TEPQPRTSDHSAPRASARPAARTTDTDSSTAFTPVSFPINVV 602
           + P   TS   +P   + P  R   +   TA +P S P N +
Sbjct: 458 SSPPAPTSPAISPSRPSAPTRR--PSPPGTACSPRSRPPNSI 577


>TC90796 similar to GP|3395431|gb|AAC28763.1| unknown protein {Arabidopsis
           thaliana}, partial (20%)
          Length = 965

 Score = 36.6 bits (83), Expect = 0.047
 Identities = 46/203 (22%), Positives = 74/203 (35%), Gaps = 6/203 (2%)
 Frame = +2

Query: 371 PEFPSPPKRKAQRKMVLDESSEESDVPLVKKTKRKPD----DGDDDDSEDGPPQKKKKKV 426
           P+   P +  ++ K   DE  E+    L ++  +       D     +E+          
Sbjct: 362 PKASPPAEVYSEPKGENDEEEEDEFAQLARRHTKTQSVTSKDATIGSTENSGSMNTSSTT 541

Query: 427 RIVVKP-TRVEPAAEVVRRTEPPARVTRSSAHSSKPALTSDDDLNLFDALPISALLQHSS 485
             V +P T V  A+  +   +PPA           P  T+  D ++ D L I+  L  SS
Sbjct: 542 PYVPEPSTAVPSASNALALPDPPA-----------PISTTSKDQDIIDLLSITLSLTPSS 688

Query: 486 NPLTPIPESQPAEQTTSPPHSPRSSFFQPSPTEAPLWNLLQNQPSRSDEPTSLLTIPY-D 544
            P T    S  + Q       P      PS TE+  +     Q    + P +    P+  
Sbjct: 689 PPTTTYAPSSASSQGGMHHQIPT-----PSSTESYSY---APQAYPGNSPYNSYVAPWAQ 844

Query: 545 PLSSEPIIHEQPEPNQTEPQPRT 567
           P S      +QP+ +  +PQP T
Sbjct: 845 PQSKSEFQTQQPQQHMYQPQPTT 913


>TC83962 similar to PIR|B86289|B86289 hypothetical protein AAF71991.1
           [imported] - Arabidopsis thaliana, partial (11%)
          Length = 679

 Score = 36.6 bits (83), Expect = 0.047
 Identities = 40/125 (32%), Positives = 57/125 (45%), Gaps = 11/125 (8%)
 Frame = +2

Query: 485 SNPLTPIPESQPAEQTTS---PPHSPRSSFFQPSPTEAPLWNLLQNQPSRS-------DE 534
           SN  TP P S  +  T+S   PP +P +S   PSP   P  +L    P+ +         
Sbjct: 71  SNSSTPSPSSSTSTSTSSSSSPPPTPSTSSTTPSP--PPPTSLSSPTPTSNHLSSA*PTT 244

Query: 535 PTSLLT-IPYDPLSSEPIIHEQPEPNQTEPQPRTSDHSAPRASARPAARTTDTDSSTAFT 593
           PT+ LT +P  PL+S P  +       + P P  S  S+P     P A  + + SS+A T
Sbjct: 245 PTNTLTAVPSTPLNS-PCSNLHLPQQTSLPSPLPS--SSPSYQTTPPALASVSLSSSA-T 412

Query: 594 PVSFP 598
           P+  P
Sbjct: 413 PLPLP 427


>TC88762 similar to GP|22136928|gb|AAM91808.1 unknown protein {Arabidopsis
           thaliana}, partial (3%)
          Length = 805

 Score = 36.6 bits (83), Expect = 0.047
 Identities = 41/161 (25%), Positives = 61/161 (37%), Gaps = 1/161 (0%)
 Frame = +3

Query: 474 ALPISALLQHSSNPLTPIPESQPAEQTTSPPHSPRSSFFQPSPTEAPLWNLLQNQPSRSD 533
           +LP       S N + P P        TSP  SP +S    + T  P      + P+ S 
Sbjct: 12  SLPPGVAQTPSGNGIAPSPYQ--FNNPTSPSSSPSASSPVSTTTSPPA-----STPASSP 170

Query: 534 EPTSLLTIPYDPLSSE-PIIHEQPEPNQTEPQPRTSDHSAPRASARPAARTTDTDSSTAF 592
             T+       P SS  P     P P        T+  +A  A + PAA T    S+TA 
Sbjct: 171 VSTTTSPPASTPASSPVPTTTSPPAPTPASSPVSTNSPTASPAGSLPAAATPSPSSTTAG 350

Query: 593 TPVSFPINVVDSSPSNNSESIRKFMEVRKEKVSALEEYYLT 633
           +P   P +    + S+N  +  + + V     S +  Y +T
Sbjct: 351 SP--SPSSTPPGTRSSNETTPGRSIGVASASPSGVWAYSIT 467


>BQ751144 weakly similar to PIR|PQ0479|PQ04 pistil extensin-like protein
           (clone pMG14) - common tobacco (fragment), partial (11%)
          Length = 632

 Score = 36.2 bits (82), Expect = 0.061
 Identities = 42/157 (26%), Positives = 64/157 (40%), Gaps = 11/157 (7%)
 Frame = +1

Query: 469 LNLFDALPISALLQHSSNPLTPIPESQPAEQTTSPPHSPR--SSFFQPSPTEAPLWNLLQ 526
           L+L  + P ++   H+       P + P     S P SP   SS F P P          
Sbjct: 178 LSLPSSPPSTSPSPHALLRSPTAPPAAPLSPPASSPSSPTRPSSLFSPPPPS-------- 333

Query: 527 NQPSRS-----DEPTSLLTIPYDPLSSEPIIHEQPEPNQTEPQPRTSDHSAPRASARPAA 581
             PSRS       P+ LL +P  PL++EP       P+   P+P +S   +P     P +
Sbjct: 334 --PSRSRPPPPSTPSPLLPLPLLPLATEP---SPFPPSSPPPRPASSPSLSPPVLLFPPS 498

Query: 582 RT----TDTDSSTAFTPVSFPINVVDSSPSNNSESIR 614
            +    + +   +A  P S P ++  S PS+   S R
Sbjct: 499 ASPPPWSPSRPPSALAPPSRP-SLPASPPSSPRSSTR 606



 Score = 32.7 bits (73), Expect = 0.68
 Identities = 48/188 (25%), Positives = 61/188 (31%), Gaps = 3/188 (1%)
 Frame = +1

Query: 513 QPSPTEAPLWNLLQNQPSRSDEPTS--LLTIPYDPLSSEPIIHEQ-PEPNQTEPQPRTSD 569
           QPS    PL  LL   PS     T   LL++P  P S+ P  H     P      P +  
Sbjct: 94  QPSK*STPLPFLLSPVPSWPTVVTRRRLLSLPSSPPSTSPSPHALLRSPTAPPAAPLSPP 273

Query: 570 HSAPRASARPAARTTDTDSSTAFTPVSFPINVVDSSPSNNSESIRKFMEVRKEKVSALEE 629
            S+P +  RP        SS    P   P       PS  S  +          +  L  
Sbjct: 274 ASSPSSPTRP--------SSLFSPPPPSPSRSRPPPPSTPSPLL---------PLPLLPL 402

Query: 630 YYLTCPSPRRYPGPRPERLVDPDEPILANPIQEADPLVQQAHPVPDQQEPIQPDPEPEQS 689
                P P   P PRP        P+L  P   + P    + P      P +P       
Sbjct: 403 ATEPSPFPPSSPPPRPASSPSLSPPVLLFPPSASPPPWSPSRPPSALAPPSRPSLPASPP 582

Query: 690 VSNQSSVR 697
            S +SS R
Sbjct: 583 SSPRSSTR 606


>TC76514 homologue to PIR|T09648|T09648 nucleolin homolog nuM1 - alfalfa,
           partial (61%)
          Length = 1288

 Score = 35.8 bits (81), Expect = 0.080
 Identities = 53/250 (21%), Positives = 85/250 (33%), Gaps = 38/250 (15%)
 Frame = +3

Query: 369 PAPEFPSPPK----RKAQRKMVLDES---SEESDVPLVKK-------------TKRKPDD 408
           PAP   +P K    +KAQ +   +ES   S  SD   VKK               +K D 
Sbjct: 345 PAPSKKTPAKKGNVKKAQPETTSEESDSDSSSSDEEEVKKPVSKAVPSKNGSAPAKKVDT 524

Query: 409 GDDDDSEDGPPQKKKKKVRIVVKPTRVEPAAEVV-------------RRTEPPARVTRSS 455
            +++DSE+   + KK   + V       PA +                  E PA     S
Sbjct: 525 SEEEDSEESSDEDKKPAAKAVPSKNGSAPAKKAASDEEDTDESSDEDEEDEKPAAKAVPS 704

Query: 456 AHSSKPAL-----TSDDDLNLFDALPISALLQHSSNPLTPIPESQPAEQTTSPPHSPRSS 510
            + S PA      +SD+D    D        + S N   P  ++  +    S   S    
Sbjct: 705 KNGSVPAKKADTESSDEDSESSDEEDKKPAAKASKNVSAPTKKAASSSDEESDEESDEDE 884

Query: 511 FFQPSPTEAPLWNLLQNQPSRSDEPTSLLTIPYDPLSSEPIIHEQPEPNQTEPQPRTSDH 570
             +P    A +    +   S SD+     +   D    +P+  ++ +    +     SD 
Sbjct: 885 DAKPVSKPAAVAKKSKKDSSDSDDEDDDSSSDED---KKPVAAKKEDKMNVDKDGSDSDQ 1055

Query: 571 SAPRASARPA 580
           S   +   P+
Sbjct: 1056SEEESEDEPS 1085



 Score = 30.4 bits (67), Expect = 3.4
 Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
 Frame = +3

Query: 842 EAIEEAKRKKEQAEE-AARQAAAQA--EQARLEAERLEAEAEALRCQALAPVVFTPAASA 898
           E ++    KK++ EE AA+Q A +   ++     E  E+E E    +A AP   TPA   
Sbjct: 201 EEVKAVSAKKQKVEEVAAKQKALKVVKKEESSSEESSESEDEQPVVKAPAPSKKTPAKKG 380

Query: 899 SIPDPQAAQNVPSSSTQTSSS 919
           ++   Q       S + +SSS
Sbjct: 381 NVKKAQPETTSEESDSDSSSS 443



 Score = 29.3 bits (64), Expect = 7.5
 Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 11/53 (20%)
 Frame = +3

Query: 388  DESSEESDVPLVKKTKRKPD---DGDDDD-----SEDGP---PQKKKKKVRIV 429
            D SS+E   P+  K + K +   DG D D     SED P   PQKK K V +V
Sbjct: 966  DSSSDEDKKPVAAKKEDKMNVDKDGSDSDQSEEESEDEPSKTPQKKIKDVEMV 1124


>TC77148 ENOD20
          Length = 1108

 Score = 35.8 bits (81), Expect = 0.080
 Identities = 41/153 (26%), Positives = 61/153 (39%), Gaps = 2/153 (1%)
 Frame = +3

Query: 422 KKKKVRIVVKPTRVEPAAEVVRRTEPPAR--VTRSSAHSSKPALTSDDDLNLFDALPISA 479
           KK+  R+ +K   V   A V+    PP      RSS     P   S           + +
Sbjct: 357 KKRHCRLGLKLAVVVMVAPVLSSPPPPPSPPTPRSSTPIPHPPRRS-----------LPS 503

Query: 480 LLQHSSNPLTPIPESQPAEQTTSPPHSPRSSFFQPSPTEAPLWNLLQNQPSRSDEPTSLL 539
               S +P +P P   P+ ++T  PH  + S   PSP+ +     L   PS S+ P SL 
Sbjct: 504 PPSPSPSP-SPSPSPSPSPRSTPIPHPRKRSPASPSPSPS-----LSKSPSPSESP-SLA 662

Query: 540 TIPYDPLSSEPIIHEQPEPNQTEPQPRTSDHSA 572
             P D ++S   +     P+   P P  S  S+
Sbjct: 663 PSPSDSVAS---LAPSSSPSDESPSPAPSPSSS 752



 Score = 29.3 bits (64), Expect = 7.5
 Identities = 16/52 (30%), Positives = 24/52 (45%)
 Frame = +3

Query: 698 SPHPLVETSDPHLGTSEPNAPMINIGSPQGASEAHSSNHPASPAPNLSIIPY 749
           SP P      P   T  P+ P  ++ SP   S + S +   SP+P  + IP+
Sbjct: 423 SPPPPPSPPTPRSSTPIPHPPRRSLPSPPSPSPSPSPSPSPSPSPRSTPIPH 578


>TC76989 homologue to SP|O24310|EFTU_PEA Elongation factor Tu  chloroplast
           precursor (EF-Tu). [Garden pea] {Pisum sativum}, partial
           (92%)
          Length = 1907

 Score = 35.8 bits (81), Expect = 0.080
 Identities = 22/74 (29%), Positives = 31/74 (41%)
 Frame = +1

Query: 635 PSPRRYPGPRPERLVDPDEPILANPIQEADPLVQQAHPVPDQQEPIQPDPEPEQSVSNQS 694
           P P   P P P  L+ P+ P L +P   + P      P+P    P+ P   P       S
Sbjct: 223 PLPLPLPFPTPPPLIVPN*P*LTSPPPSSTPPQSSTSPLPPNPPPLAPPLSPSVPPVANS 402

Query: 695 SVRSPHPLVETSDP 708
           S +S   L+ T +P
Sbjct: 403 SAKS---LISTLEP 435


>TC91221 similar to GP|21553718|gb|AAM62811.1 unknown {Arabidopsis
           thaliana}, partial (31%)
          Length = 917

 Score = 35.4 bits (80), Expect = 0.10
 Identities = 41/133 (30%), Positives = 57/133 (42%), Gaps = 8/133 (6%)
 Frame = +2

Query: 484 SSNPLTPIPESQPAEQTTSPPHSPRSSFFQPSPTEAPLWNLLQNQPSRSDEPTSLLTIPY 543
           S+ P T  P   P  Q   PP  P SS   PSP       L  + P     PTS     +
Sbjct: 338 STTPSTQPPTHSPPPQLPPPPPPPPSSNHPPSP-------LSSSSPWHPFSPTSHPPEHH 496

Query: 544 DPL-----SSEPIIHEQPEPNQTEPQPRTSDHSAPRASARPAARTTDTDSSTAFT--PVS 596
            PL     ++  +I  Q  P  T P P  S  S P  S  P+   + T S   FT  P  
Sbjct: 497 PPLPTTATNTSVVIATQTPP--TTP*P-PSVPSQPNTSG-PSKLHSVTLSGVLFTASPTP 664

Query: 597 F-PINVVDSSPSN 608
           F P+++++S+P++
Sbjct: 665 FSPLSLINSNPTS 703


>AW689097 weakly similar to PIR|T47565|T47 hypothetical protein F24B22.20 -
           Arabidopsis thaliana, partial (24%)
          Length = 582

 Score = 35.4 bits (80), Expect = 0.10
 Identities = 17/39 (43%), Positives = 24/39 (60%), Gaps = 1/39 (2%)
 Frame = -2

Query: 732 HSSNHPASPAPNLSIIPYT-HLQPTSLSECINIFYHEAS 769
           H ++H  +  P  S++PY   L PTSLS   NI+ H+AS
Sbjct: 317 HXAHHSRTSEPGSSLVPYKPFLDPTSLSAPSNIYTHQAS 201


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.313    0.130    0.374 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,594,218
Number of Sequences: 36976
Number of extensions: 434631
Number of successful extensions: 3467
Number of sequences better than 10.0: 190
Number of HSP's better than 10.0 without gapping: 3026
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3385
length of query: 952
length of database: 9,014,727
effective HSP length: 105
effective length of query: 847
effective length of database: 5,132,247
effective search space: 4347013209
effective search space used: 4347013209
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 63 (28.9 bits)