TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0010.17
         (237 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC79896 similar to GP|15795154|dbj|BAB03142. gene_id:MQC3.16~unk...    36  0.015
BQ143784 weakly similar to SP|P33485|VNUA Probable nuclear antig...    35  0.033
BQ137237 weakly similar to GP|11993889|gb| virion-associated nuc...    33  0.074
TC80228 similar to GP|21592725|gb|AAM64674.1 unknown {Arabidopsi...    33  0.074
TC78611 similar to GP|15450599|gb|AAK96571.1 AT5g17440/K3M16_10 ...    33  0.096
TC77946 homologue to GP|10334491|emb|CAC10207. putative splicing...    33  0.096
TC84888 similar to GP|21322752|dbj|BAB78536. cold shock protein-...    33  0.13
TC88447 similar to GP|21593015|gb|AAM64964.1 unknown {Arabidopsi...    32  0.16
BQ141785 similar to GP|23093252|gb| CG13731-PA {Drosophila melan...    32  0.21
TC85697 homologue to SP|P53496|ACTB_ARATH Actin 11. [Mouse-ear c...    32  0.21
BQ751419 weakly similar to GP|21629340|gb L509.2 {Leishmania maj...    32  0.21
BQ135858 similar to GP|23491723|db formin homology protein A {Di...    32  0.21
BQ137613 similar to PIR|S40770|S40 genome polyprotein - hepatiti...    32  0.21
BE325350 weakly similar to GP|13702821|gb| putative snRNP protei...    32  0.28
BQ752120                                                               32  0.28
BQ151174 similar to GP|11036868|gb| PxORF73 peptide {Plutella xy...    32  0.28
BQ151366 similar to GP|20146300|dbj hypothetical protein~similar...    31  0.36
BQ137244 similar to GP|20161222|dbj Epstein-Barr virus EBNA-1-li...    31  0.36
AJ502412 similar to GP|21592647|gb| unknown {Arabidopsis thalian...    31  0.36
BQ137241 similar to GP|6523547|emb| hydroxyproline-rich glycopro...    31  0.36

>TC79896 similar to GP|15795154|dbj|BAB03142. gene_id:MQC3.16~unknown
           protein {Arabidopsis thaliana}, partial (58%)
          Length = 739

 Score = 35.8 bits (81), Expect = 0.015
 Identities = 29/97 (29%), Positives = 41/97 (41%), Gaps = 7/97 (7%)
 Frame = +2

Query: 90  QQRQGFLVDPKFTVASPIFTLNPATQQPYNLHEH---RQQQQPPPPQPTTFTLSTE---- 142
           Q R  FL+ P    A P F+   +  +P NL  H   R    PPPP+ T+ T  T     
Sbjct: 62  QTRFHFLLPPNLFYADPSFS---SPHEPPNLKHHPPIRIHPNPPPPEKTSTTALTNCVFV 232

Query: 143 PRKTDKRRRRRDPGKEIERDREPPIETSHPNLHRDRD 179
            R+   R+++ +  K + R            LHR RD
Sbjct: 233 TREAPARKQKSEKAKNLIR------------LHRGRD 307


>BQ143784 weakly similar to SP|P33485|VNUA Probable nuclear antigen. [strain
           Kaplan  PRV] {Pseudorabies virus}, partial (2%)
          Length = 1022

 Score = 34.7 bits (78), Expect = 0.033
 Identities = 26/86 (30%), Positives = 37/86 (42%), Gaps = 4/86 (4%)
 Frame = +3

Query: 126 QQQPPPPQPTTFTLSTEPRKTDKRRRRRDPGKEIERDREPPIETSHPNLHRDRDGGGMER 185
           Q  PPPP+P    L   PR+  K++    P  +  R R  P     P+        G ER
Sbjct: 189 QTDPPPPRPRGGGL---PRQPTKKQTPSMPAPKKRRTRGHPPPPGKPHHAAPPPNAGRER 359

Query: 186 R--GARSRETAKRDRETMD--HHHAL 207
           R  G   R++ K  +E     HHH++
Sbjct: 360 RAPGKSHRKSKKPPQEKTQPPHHHSI 437


>BQ137237 weakly similar to GP|11993889|gb| virion-associated
           nuclear-shuttling protein {Mus musculus}, partial (4%)
          Length = 1215

 Score = 33.5 bits (75), Expect = 0.074
 Identities = 24/84 (28%), Positives = 32/84 (37%)
 Frame = +1

Query: 109 TLNPATQQPYNLHEHRQQQQPPPPQPTTFTLSTEPRKTDKRRRRRDPGKEIERDREPPIE 168
           T +P TQ P   H     ++       T     + RK    RR  + G   + +      
Sbjct: 214 THHPKTQTP--THADPNAEKSKRSAEGTRKADNKKRKDAHARREGEGGGGSKANGHAGPR 387

Query: 169 TSHPNLHRDRDGGGMERRGARSRE 192
           T     HRDRDG G  RR  R +E
Sbjct: 388 TERQTSHRDRDGRGTRRRRGRQKE 459



 Score = 29.3 bits (64), Expect = 1.4
 Identities = 29/92 (31%), Positives = 39/92 (41%), Gaps = 2/92 (2%)
 Frame = +3

Query: 111 NPATQQPYNLHEHRQQQQPPPPQPTTFTLSTEPRKTDKRRRRRDPGKEIERDREPPIETS 170
           N ATQQ    H   +   P P +P       + R+  K RRR   G++ ++ R       
Sbjct: 189 NRATQQ--KRHAPPENTNPDPRRP-------KRREEQKERRRNKEGRQQKKKR------- 320

Query: 171 HPNLHRDRDGGGMERRGARSRETAKR--DRET 200
                R R  GG  RRG    E A+R  DR+T
Sbjct: 321 -----RARAQGG-RRRGGEQSERARRTPDRKT 398


>TC80228 similar to GP|21592725|gb|AAM64674.1 unknown {Arabidopsis
           thaliana}, partial (42%)
          Length = 798

 Score = 33.5 bits (75), Expect = 0.074
 Identities = 18/69 (26%), Positives = 30/69 (43%)
 Frame = +1

Query: 144 RKTDKRRRRRDPGKEIERDREPPIETSHPNLHRDRDGGGMERRGARSRETAKRDRETMDH 203
           R+ D+RR + D  ++++RDR    + +     R R    +  R +RSR    R      H
Sbjct: 94  RERDRRRDKDDRDRDVDRDRNRDRDRARSKRSRTRSPDRVRSRHSRSRSPVDRSHRRRHH 273

Query: 204 HHALHLPPQ 212
                 PP+
Sbjct: 274 RTPSPDPPR 300


>TC78611 similar to GP|15450599|gb|AAK96571.1 AT5g17440/K3M16_10 {Arabidopsis
            thaliana}, partial (91%)
          Length = 1636

 Score = 33.1 bits (74), Expect = 0.096
 Identities = 21/62 (33%), Positives = 29/62 (45%)
 Frame = +1

Query: 144  RKTDKRRRRRDPGKEIERDREPPIETSHPNLHRDRDGGGMERRGARSRETAKRDRETMDH 203
            RK D+   RR   +  +RDREP          RDR+ G    RG   R+  +R R+  + 
Sbjct: 1009 RKIDRLDDRRSKERSRDRDREP---------SRDRERGESHERG---RDNDRRSRDRDNR 1152

Query: 204  HH 205
            HH
Sbjct: 1153 HH 1158


>TC77946 homologue to GP|10334491|emb|CAC10207. putative splicing factor
           {Cicer arietinum}, complete
          Length = 2061

 Score = 33.1 bits (74), Expect = 0.096
 Identities = 18/56 (32%), Positives = 25/56 (44%)
 Frame = +3

Query: 144 RKTDKRRRRRDPGKEIERDREPPIETSHPNLHRDRDGGGMERRGARSRETAKRDRE 199
           R+ D+  R R  G+  ERD E            +R G   ER   R +E  +RD+E
Sbjct: 327 RERDREHRERSSGRHRERDGERGSREKEREKDVERGGRDKERDREREKERERRDKE 494



 Score = 30.4 bits (67), Expect = 0.62
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = +3

Query: 150 RRRRDPGKEIERDREPPIETSHPNLHRDRDGGGMERRGARSRETAKRDRE 199
           ++ RD  ++ ERDRE    +S  +  RD + G  E+   +  E   RD+E
Sbjct: 300 KKDRDRDRDRERDREHRERSSGRHRERDGERGSREKEREKDVERGGRDKE 449


>TC84888 similar to GP|21322752|dbj|BAB78536. cold shock protein-1 {Triticum
           aestivum}, partial (58%)
          Length = 612

 Score = 32.7 bits (73), Expect = 0.13
 Identities = 26/84 (30%), Positives = 30/84 (34%), Gaps = 5/84 (5%)
 Frame = -2

Query: 127 QQPPPPQPTTFTLSTEPRKTDKRRRRRDPGKEIERDREPPIET-----SHPNLHRDRDGG 181
           Q PPP  P+        R+     RR  PG    R R  P  +      H  LHR R   
Sbjct: 557 Q*PPP*LPSCGLAGXNSRRRILPGRRSRPGXSHRRRRSHPXGSHRRHGHHHGLHRSR--- 387

Query: 182 GMERRGARSRETAKRDRETMDHHH 205
              RR  R R +  R R    H H
Sbjct: 386 --HRRSHRHRRSPGRSRHRSRHRH 321


>TC88447 similar to GP|21593015|gb|AAM64964.1 unknown {Arabidopsis
           thaliana}, partial (47%)
          Length = 1079

 Score = 32.3 bits (72), Expect = 0.16
 Identities = 23/91 (25%), Positives = 38/91 (41%), Gaps = 4/91 (4%)
 Frame = +2

Query: 113 ATQQPYNLHEHRQQQQPPPPQPTT-FTLSTEPRKTDKRRRRRDPGKEIERDREPPIETSH 171
           A ++ +   E  +  + P  +P   +     P +   R RRRD  +  +RD +   +  +
Sbjct: 176 ALEEDFEEEEENEDNEQPAEEPEKDYNRGRSPARERDRDRRRDSHRHRDRDYDREYDRDY 355

Query: 172 PNLH---RDRDGGGMERRGARSRETAKRDRE 199
                  R+    G ER G R RE   RDR+
Sbjct: 356 DRDRYRLREEKDYGREREG-RERERRDRDRD 445



 Score = 31.6 bits (70), Expect = 0.28
 Identities = 17/50 (34%), Positives = 24/50 (48%)
 Frame = +2

Query: 148 KRRRRRDPGKEIERDREPPIETSHPNLHRDRDGGGMERRGARSRETAKRD 197
           + R RRD  ++  R R      S     +D DGG   +R ARS  + +RD
Sbjct: 413 RERERRDRDRDRGRRRSYSRSRSRSRDRKDHDGGDYRKRHARSSVSPRRD 562


>BQ141785 similar to GP|23093252|gb| CG13731-PA {Drosophila melanogaster},
           partial (2%)
          Length = 1049

 Score = 32.0 bits (71), Expect = 0.21
 Identities = 32/111 (28%), Positives = 46/111 (40%), Gaps = 19/111 (17%)
 Frame = +2

Query: 124 RQQQQPPPPQPTTFT-----LSTEPRKTDKRRRRRDPGKEIERD----REPPIETSH--- 171
           ++Q+QP  P PT  T     LS  P+K  +   R+  G+E+ER     R P  ET     
Sbjct: 71  KKQKQPF*PAPTNGTAPPPNLSFPPQKNQQSTSRKKAGEEVERGKGNMRNPEAETPESQR 250

Query: 172 ---PNLH---RDRDGGGMERRGARSRETAKRDRETMDHHH-ALHLPPQIPE 215
              P LH   R          G  +   AK + +++  H  +   PP  PE
Sbjct: 251 KIPPPLHL*GRIPSDHNRIHNGRETPTRAKNNSQSLSKHK*SGPHPPPTPE 403


>TC85697 homologue to SP|P53496|ACTB_ARATH Actin 11. [Mouse-ear cress]
           {Arabidopsis thaliana}, complete
          Length = 1528

 Score = 32.0 bits (71), Expect = 0.21
 Identities = 16/49 (32%), Positives = 28/49 (56%), Gaps = 1/49 (2%)
 Frame = -2

Query: 117 PYNLHEHRQQQQPPPPQPTTFTLSTEPRKTDKRRRRRDPG-KEIERDRE 164
           P+  H H+Q+ + P   P++     E  + D R+RRR+   ++ ER+RE
Sbjct: 156 PFQFHCHKQEVEYPQRLPSSTIFGKENAEGDGRQRRRENAQRKRERERE 10


>BQ751419 weakly similar to GP|21629340|gb L509.2 {Leishmania major}, partial
           (1%)
          Length = 766

 Score = 32.0 bits (71), Expect = 0.21
 Identities = 30/92 (32%), Positives = 39/92 (41%), Gaps = 5/92 (5%)
 Frame = +2

Query: 130 PPPQPTTFTLSTEPRKTDKRRRRRDPGKEIERDREPPIETSHPNLHRDRDG-----GGME 184
           P PQ +T   S +PR     R RRDP     R R P +   HP+ H+ RDG       + 
Sbjct: 14  PQPQTSTQHGSHQPRP----RPRRDPRLRPLRPRVPLLARRHPHQHQ-RDGLLSMAIPLR 178

Query: 185 RRGARSRETAKRDRETMDHHHALHLPPQIPEP 216
           RR  R R+           HH L    ++P P
Sbjct: 179 RRPLRHRQ-----------HHRLAPRRRLPHP 241


>BQ135858 similar to GP|23491723|db formin homology protein A {Dictyostelium
           discoideum}, partial (4%)
          Length = 1033

 Score = 32.0 bits (71), Expect = 0.21
 Identities = 19/69 (27%), Positives = 34/69 (48%), Gaps = 3/69 (4%)
 Frame = +2

Query: 111 NPATQQPYNLHEHRQQQQPPPP---QPTTFTLSTEPRKTDKRRRRRDPGKEIERDREPPI 167
           NP  +    L+  ++++ PPPP   +P   TL  E  K  K+R     G  +++ ++PP 
Sbjct: 26  NPVRRGKKKLNFSKKKKTPPPPPLFRPPKKTLFFEKNKKIKKRGGGGGGFFLKKKKKPPP 205

Query: 168 ETSHPNLHR 176
           +    NL +
Sbjct: 206 QKKKKNLKK 232


>BQ137613 similar to PIR|S40770|S40 genome polyprotein - hepatitis C virus,
           partial (0%)
          Length = 964

 Score = 32.0 bits (71), Expect = 0.21
 Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 8/90 (8%)
 Frame = +1

Query: 115 QQPYNLHEHRQQQQP-------PPPQPTTFTLSTEPRKTDKRRRRRDPGKEIERDREPP- 166
           +QP +  E  QQ Q        PP +       TEPRKT +R+++ D  KE +R   PP 
Sbjct: 73  RQPPSEREKTQQTQTRQTFLPRPPSERKKTRKETEPRKT-QRKKKADNRKERQRKEVPPG 249

Query: 167 IETSHPNLHRDRDGGGMERRGARSRETAKR 196
             T  P+    R     ER+   + +  K+
Sbjct: 250 KNTKQPHPTDARPPRSAERKRPDTTKKVKQ 339



 Score = 28.9 bits (63), Expect = 1.8
 Identities = 20/74 (27%), Positives = 27/74 (36%)
 Frame = +2

Query: 123 HRQQQQPPPPQPTTFTLSTEPRKTDKRRRRRDPGKEIERDREPPIETSHPNLHRDRDGGG 182
           H     P PP P     S   +K D  R R     + +RDR       HP   R      
Sbjct: 2   HEDTPPPQPPLPAHDGKSRPAKKNDSHRVRGKRHSKHKRDR-LFFPAPHPREKRPEKKRN 178

Query: 183 MERRGARSRETAKR 196
            ERR  + + T ++
Sbjct: 179 RERRNEKKKPTTEK 220


>BE325350 weakly similar to GP|13702821|gb| putative snRNP protein {Oryza
           sativa}, partial (6%)
          Length = 473

 Score = 31.6 bits (70), Expect = 0.28
 Identities = 33/111 (29%), Positives = 41/111 (36%), Gaps = 10/111 (9%)
 Frame = +2

Query: 99  PKFTVASPIFTLNPATQQPYNLHEHRQQQQPPPPQPTTFTLSTEPR-----KTDKRRRRR 153
           P   +  P+F      +Q      H Q       Q     LST         +D+R R R
Sbjct: 77  PATAIPKPVFLTKAQREQQALERRHNQVAGHKRDQEELLLLSTNNNINRSSDSDRRDRDR 256

Query: 154 DPGKEI----ERDREPPIETSHPNLHRDRDGGGMERRGA-RSRETAKRDRE 199
           D G +     ERDR+   E       RDRD    ERR   R RE   + RE
Sbjct: 257 DRGHDRDSYRERDRDRDRER-----ERDRDNRDRERRHRDREREEENKVRE 394


>BQ752120 
          Length = 659

 Score = 31.6 bits (70), Expect = 0.28
 Identities = 25/78 (32%), Positives = 32/78 (40%), Gaps = 2/78 (2%)
 Frame = +1

Query: 123 HRQQQQPPPPQPTTFT-LSTEPRKTDKRRRRRDPGKEIERDREPPIE-TSHPNLHRDRDG 180
           H Q    P    T F  L   P    + RRRR+P +EI R R PP + +SH +   D  G
Sbjct: 316 HLQTPLQPSNAATFFEKLVGAPEPQGRTRRRRNPPREIPRPRHPPRQPSSHVSFPLDPVG 495

Query: 181 GGMERRGARSRETAKRDR 198
                     R  A+  R
Sbjct: 496 SPRAGHAQPVRPAARDHR 549


>BQ151174 similar to GP|11036868|gb| PxORF73 peptide {Plutella xylostella
           granulovirus}, partial (42%)
          Length = 909

 Score = 31.6 bits (70), Expect = 0.28
 Identities = 33/124 (26%), Positives = 37/124 (29%), Gaps = 17/124 (13%)
 Frame = +3

Query: 109 TLNPATQQPYNLHEHRQQQQPPP-PQPTTFTLSTEPRKTDKRRRRRDPGKEIERDREP-- 165
           T NP  Q       H  +   PP P PTT T       TD    R  P    +    P  
Sbjct: 195 TTNPKKQHTPTTPTHPPRPHTPPTPPPTTQTTPPREAPTDPGTTRGTPPTADDAQTSPAH 374

Query: 166 -----------PIETSHPNLHRDRDGGGMERRGARSRET---AKRDRETMDHHHALHLPP 211
                      P     P     R G   + R A+   T    KRDR   D     H PP
Sbjct: 375 HPGEGGGKGGAPPPPPRPPPRHGRGGHQNQTREAKRTTTEPQGKRDRPRTDPRKKKHPPP 554

Query: 212 QIPE 215
              E
Sbjct: 555 HQKE 566



 Score = 28.9 bits (63), Expect = 1.8
 Identities = 22/89 (24%), Positives = 33/89 (36%)
 Frame = +2

Query: 128 QPPPPQPTTFTLSTEPRKTDKRRRRRDPGKEIERDREPPIETSHPNLHRDRDGGGMERRG 187
           +PP PQP     S  P+K   +    +  K  +  +EPP +   P             R 
Sbjct: 8   RPPNPQPP----SDPPKKRTPKPETPNRKKPQKNKKEPPKKRKTPPEASHPPPRPRPPRP 175

Query: 188 ARSRETAKRDRETMDHHHALHLPPQIPEP 216
            +      + ++T   HH  H PP  P P
Sbjct: 176 PQPNHQHDKPQKTTHPHHP-HTPPPTPHP 259



 Score = 26.9 bits (58), Expect = 6.9
 Identities = 14/57 (24%), Positives = 27/57 (46%)
 Frame = +3

Query: 129 PPPPQPTTFTLSTEPRKTDKRRRRRDPGKEIERDREPPIETSHPNLHRDRDGGGMER 185
           PP P P       + +  + +R   +P  + +R R  P +  HP  H+ ++GG  ++
Sbjct: 417 PPRPPPRHGRGGHQNQTREAKRTTTEPQGKRDRPRTDPRKKKHPPPHQ-KEGGNTQK 584


>BQ151366 similar to GP|20146300|dbj hypothetical protein~similar to Oryza
           sativa OSJNBa0058E19.20, partial (9%)
          Length = 1137

 Score = 31.2 bits (69), Expect = 0.36
 Identities = 26/95 (27%), Positives = 39/95 (40%), Gaps = 6/95 (6%)
 Frame = +2

Query: 126 QQQPPPPQPTTFTLSTEPRKTDKRRRRRDPGKEIERD--REPPIETSHPNLH---RDRDG 180
           +QQPPPP        T   K   R  ++  G    R+  R+    T+    H   + R+ 
Sbjct: 335 EQQPPPPAQPGAKRRTAGTKGPPRGSKKGGGNADRREGQRKRRHRTARREKHPRAKTREN 514

Query: 181 GGMERRGAR-SRETAKRDRETMDHHHALHLPPQIP 214
               +RGAR +  T K++R+      A   P Q P
Sbjct: 515 NPQRKRGAREAGSTRKKERQKRHARPAARAPRQPP 619


>BQ137244 similar to GP|20161222|dbj Epstein-Barr virus EBNA-1-like protein
           {Oryza sativa (japonica cultivar-group)}, partial (5%)
          Length = 1050

 Score = 31.2 bits (69), Expect = 0.36
 Identities = 21/78 (26%), Positives = 37/78 (46%), Gaps = 9/78 (11%)
 Frame = +1

Query: 134 PTTFTLSTEPRKTDKRRRRRDPGKEIER---DREPPIETSHP------NLHRDRDGGGME 184
           P T   + +  + ++R RR+D  + + R   +R  P  ++        +  RDRD  G E
Sbjct: 604 PETRRGARDTGERERRSRRQDSARHVRRHDGERGQPRASARTRDDARNSSGRDRDASGEE 783

Query: 185 RRGARSRETAKRDRETMD 202
           RR  R R  + R R+ ++
Sbjct: 784 RRERRERNESGRARDAIE 837


>AJ502412 similar to GP|21592647|gb| unknown {Arabidopsis thaliana}, partial
           (20%)
          Length = 436

 Score = 31.2 bits (69), Expect = 0.36
 Identities = 25/79 (31%), Positives = 30/79 (37%), Gaps = 7/79 (8%)
 Frame = +1

Query: 63  MVGLLLGLLEPFRIWVVTATHGREKQKQQRQGFLVDPKFTVASPIFTL-NPATQQPYNLH 121
           + GL+LG       + V   H   K   Q  G    P F   +P FTL NP +  P N  
Sbjct: 199 ITGLILG-------FGVLRRHHNNKCSDQSCGSFPPPNFNSPTPPFTLNNPVSSNPPNPP 357

Query: 122 EHRQ------QQQPPPPQP 134
              Q         PPPP P
Sbjct: 358 AESQSPPVITNPTPPPPPP 414


>BQ137241 similar to GP|6523547|emb| hydroxyproline-rich glycoprotein DZ-HRGP
           {Volvox carteri f. nagariensis}, partial (8%)
          Length = 1176

 Score = 31.2 bits (69), Expect = 0.36
 Identities = 31/109 (28%), Positives = 49/109 (44%), Gaps = 30/109 (27%)
 Frame = +2

Query: 122 EHRQQQQPPP---------------PQPTTFTLSTEPRKT-DKRRRRRDPGKEIERDREP 165
           EHR+++ P P               P+P   T +  P+KT ++R+R R  G +    +EP
Sbjct: 191 EHRKKEPPKPEARRNPHNRTTRNSRPRPKE-TRAARPKKTPNERKRGRRRGTQTHNKKEP 367

Query: 166 ------PIETSHPNLHRDRDGGGM-----ERRG---ARSRETAKRDRET 200
                   E +H   H+++  GG      ERRG   AR +   +R +ET
Sbjct: 368 RGGADEKPERTHKR-HKNKQQGGRRGKKGERRGRERAREKRGGERGQET 511



 Score = 26.6 bits (57), Expect = 9.0
 Identities = 15/43 (34%), Positives = 22/43 (50%)
 Frame = +1

Query: 149 RRRRRDPGKEIERDREPPIETSHPNLHRDRDGGGMERRGARSR 191
           R RRR PG + ++  E     + P+L   +DG   E  GA+ R
Sbjct: 22  RPRRRTPG*KKKKRSEGDQARTFPSLKGTKDGAPPEGAGAQKR 150


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.318    0.138    0.424 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,443,047
Number of Sequences: 36976
Number of extensions: 141623
Number of successful extensions: 1864
Number of sequences better than 10.0: 116
Number of HSP's better than 10.0 without gapping: 1648
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1802
length of query: 237
length of database: 9,014,727
effective HSP length: 93
effective length of query: 144
effective length of database: 5,575,959
effective search space: 802938096
effective search space used: 802938096
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)