BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0009.4
(89 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC81307 weakly similar to GP|4335772|gb|AAD17449.1| unknown prot... 39 5e-04
TC89427 weakly similar to GP|4557063|gb|AAD22502.1| expressed pr... 37 0.001
TC87869 similar to GP|23504577|emb|CAD51456. chromosome condensa... 37 0.001
TC80072 similar to GP|14423520|gb|AAK62442.1 Unknown protein {Ar... 35 0.004
TC80893 similar to GP|4557063|gb|AAD22502.1| expressed protein {... 34 0.009
TC81765 similar to GP|12323731|gb|AAG51827.1 hypothetical protei... 33 0.015
TC77148 ENOD20 33 0.015
TC86552 similar to PIR|G85436|G85436 hypothetical protein AT4g36... 33 0.015
TC77337 weakly similar to GP|4019275|gb|AAC95573.1| orf 48 {Atel... 33 0.019
BG583961 similar to GP|14599408|em probable major surface glycop... 33 0.019
TC89612 similar to GP|6934300|gb|AAF31706.1| unknown {Euphorbia ... 33 0.025
AW585081 similar to GP|6815137|dbj| pORF1 {TT virus}, partial (3%) 32 0.042
TC91658 similar to GP|14329812|emb|CAC40753. putative nucleosome... 32 0.055
AW696163 similar to GP|13359054|dbj contains ESTs D15403(C0585) ... 32 0.055
AA660309 similar to PIR|H84545|H84 probable ubiquitin-conjugatin... 32 0.055
TC80809 similar to GP|22136852|gb|AAM91770.1 unknown protein {Ar... 32 0.055
TC93070 weakly similar to GP|17065230|gb|AAL32769.1 Unknown prot... 32 0.055
BF643828 similar to GP|15810439|gb| unknown protein {Arabidopsis... 31 0.072
BF632358 weakly similar to GP|19352296|gb MULTIPLE BANDED ANTIGE... 31 0.072
TC80981 similar to GP|8698730|gb|AAF78488.1| ESTs gb|Z18526 gb|... 31 0.072
>TC81307 weakly similar to GP|4335772|gb|AAD17449.1| unknown protein
{Arabidopsis thaliana}, partial (31%)
Length = 1171
Score = 38.5 bits (88), Expect = 5e-04
Identities = 20/58 (34%), Positives = 35/58 (59%)
Frame = -2
Query: 30 VMAMTTTSEVVEAVVVVLEGEGDDGGSVSDDSDEDNDSGDSEGDNGGDNDNDGGDSDG 87
V M+T +E + +V V GDDGG D+D +++ G+ + ++GGD+ ND + +G
Sbjct: 750 VHQMSTPAEWLNSVGVF--HYGDDGGECP*DTDVEDEKGECKNEDGGDSANDFREGEG 583
>TC89427 weakly similar to GP|4557063|gb|AAD22502.1| expressed protein
{Arabidopsis thaliana}, partial (50%)
Length = 753
Score = 37.0 bits (84), Expect = 0.001
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +1
Query: 53 DGGSVSDDSDEDNDSGDSEGDNGGDNDNDGGDSD 86
+G SDD DED+D D + D+G D D D + D
Sbjct: 430 NGAGGSDDDDEDDDDDDDDNDDGEDEDEDEEEDD 531
Score = 31.2 bits (69), Expect = 0.072
Identities = 17/38 (44%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Frame = +1
Query: 50 EGDDGGSVSDDSDEDNDSGDSEGDNGGDNDND-GGDSD 86
E DG DD DE D D D DND D GD D
Sbjct: 286 ENKDGSETEDDDDE--DDDDDVNDEDDDNDEDFSGDED 393
Score = 29.3 bits (64), Expect = 0.27
Identities = 17/58 (29%), Positives = 25/58 (42%), Gaps = 18/58 (31%)
Frame = +1
Query: 48 EGEGDDGGSVSDDSDED------------------NDSGDSEGDNGGDNDNDGGDSDG 87
E + DD DD+DED N +G S+ D+ D+D+D + DG
Sbjct: 325 EDDDDDVNDEDDDNDEDFSGDEDDEDADPEDDPVPNGAGGSDDDDEDDDDDDDDNDDG 498
Score = 28.1 bits (61), Expect = 0.61
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +1
Query: 49 GEGDDGGSVSDDSDEDNDSGDSEGDNGGDNDNDGGDSDGG 88
G+ DD + +D N +G S+ D+ D+D+D D+D G
Sbjct: 382 GDEDDEDADPEDDPVPNGAGGSDDDDEDDDDDD-DDNDDG 498
Score = 26.6 bits (57), Expect = 1.8
Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 51 GDDGGSVSDDSDE-DNDSGDSEGDNGGDNDND 81
G D DD D+ DND G+ E ++ ++D++
Sbjct: 442 GSDDDDEDDDDDDDDNDDGEDEDEDEEEDDDE 537
>TC87869 similar to GP|23504577|emb|CAD51456. chromosome condensation
protein putative {Plasmodium falciparum 3D7}, partial
(0%)
Length = 1154
Score = 37.0 bits (84), Expect = 0.001
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 6/46 (13%)
Frame = +1
Query: 47 LEGEGDDGGSVSD------DSDEDNDSGDSEGDNGGDNDNDGGDSD 86
++ G DG + +D D D+D +SG S D+G DND D D+D
Sbjct: 478 IDSGGFDGDTETDNVVDAFDKDKDCNSGSSSDDDGSDNDGDDADAD 615
Score = 33.5 bits (75), Expect = 0.015
Identities = 25/81 (30%), Positives = 36/81 (43%)
Frame = +1
Query: 1 MVIMVVTLAAVEEGGRGDSGGGGPLWYILVMAMTTTSEVVEAVVVVLEGEGDDGGSVSDD 60
M + L A+ E DSGG T T VV+A + + + GS SDD
Sbjct: 430 MTLWKPPLHAIHEDEDIDSGGFD--------GDTETDNVVDAFD---KDKDCNSGSSSDD 576
Query: 61 SDEDNDSGDSEGDNGGDNDND 81
DND D++ DN G++ +
Sbjct: 577 DGSDNDGDDADADNTGEDSEE 639
Score = 32.0 bits (71), Expect = 0.042
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
Frame = +1
Query: 48 EGEGDDGGSVSDDSDEDN--DSGDSEGD--NGGDNDNDGGDSDG 87
E E D G D++ DN D+ D + D +G +D+DG D+DG
Sbjct: 466 EDEDIDSGGFDGDTETDNVVDAFDKDKDCNSGSSSDDDGSDNDG 597
>TC80072 similar to GP|14423520|gb|AAK62442.1 Unknown protein {Arabidopsis
thaliana}, partial (17%)
Length = 746
Score = 35.4 bits (80), Expect = 0.004
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +1
Query: 48 EGEGDDGGSVSDDSDEDNDSGDSEGDNGGDNDNDGGDSDG 87
E + DD + +D D DND D +GD D+D++ + DG
Sbjct: 433 ESDEDDEMPIFNDKDIDNDETDEDGDEEEDDDDEDDEYDG 552
>TC80893 similar to GP|4557063|gb|AAD22502.1| expressed protein {Arabidopsis
thaliana}, partial (39%)
Length = 883
Score = 34.3 bits (77), Expect = 0.009
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 5/44 (11%)
Frame = +3
Query: 48 EGEGDD-----GGSVSDDSDEDNDSGDSEGDNGGDNDNDGGDSD 86
EG+ +D G SDD ++D+D GD E + G+++ D D +
Sbjct: 417 EGDPEDDPEANGAGGSDDGEDDDDDGDEEDEEDGEDEEDEEDEE 548
Score = 32.7 bits (73), Expect = 0.025
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +3
Query: 51 GDDGGSVSDDSDEDNDSGDSEGDNGGDNDNDGGDSD 86
GD+G D D+ +G D+G D+D+DG + D
Sbjct: 399 GDEGEEEGDPEDDPEANGAGGSDDGEDDDDDGDEED 506
Score = 28.5 bits (62), Expect = 0.47
Identities = 11/41 (26%), Positives = 23/41 (55%), Gaps = 4/41 (9%)
Frame = +3
Query: 50 EGDDGGSVSDDSDED----NDSGDSEGDNGGDNDNDGGDSD 86
EG++ G DD + + +D G+ + D+G + D + G+ +
Sbjct: 405 EGEEEGDPEDDPEANGAGGSDDGEDDDDDGDEEDEEDGEDE 527
Score = 28.1 bits (61), Expect = 0.61
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +3
Query: 49 GEGDDGGSVSDDSD-EDNDSGDSEGDNGGDNDND 81
G DDG DD D ED + G+ E D + ++D
Sbjct: 456 GGSDDGEDDDDDGDEEDEEDGEDEEDEEDEEEDD 557
Score = 26.2 bits (56), Expect = 2.3
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +3
Query: 59 DDSDEDNDSGDSEGDNGGDNDNDGGDSD 86
D+ D+D+D E D+G + D G + +
Sbjct: 330 DEDDDDDDDVQDEDDDGEEEDYSGDEGE 413
>TC81765 similar to GP|12323731|gb|AAG51827.1 hypothetical protein;
55509-55015 {Arabidopsis thaliana}, partial (25%)
Length = 710
Score = 33.5 bits (75), Expect = 0.015
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +1
Query: 56 SVSDDSDEDNDSGDSEGDNGGDNDNDGGDSDGG 88
+ DDS+ D++ S D+GG+ND++ D D G
Sbjct: 469 AADDDSETDSEEESSTDDDGGENDSNFDDCDNG 567
Score = 24.6 bits (52), Expect = 6.7
Identities = 12/32 (37%), Positives = 17/32 (52%)
Frame = +1
Query: 48 EGEGDDGGSVSDDSDEDNDSGDSEGDNGGDND 79
E + ++ S DD E NDS + DNG D +
Sbjct: 487 ETDSEEESSTDDDGGE-NDSNFDDCDNGNDGN 579
>TC77148 ENOD20
Length = 1108
Score = 33.5 bits (75), Expect = 0.015
Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = -1
Query: 48 EGEGDDGGSVSDDSDEDNDS-GDSEGDNGGDNDNDGGDSDG 87
EGE DDG + + +S+ D S GDSEG+ D+D DG G
Sbjct: 712 EGE-DDGANEATESEGDGASDGDSEGEGDFDSDGDGDGEAG 593
Score = 32.0 bits (71), Expect = 0.042
Identities = 18/43 (41%), Positives = 24/43 (54%), Gaps = 4/43 (9%)
Frame = -1
Query: 49 GEGDDGGSVSDDSDEDNDS---GDSEGDNGGDNDNDG-GDSDG 87
GEGD D ++E +S G S+GD+ G+ D D GD DG
Sbjct: 730 GEGDSSEGEDDGANEATESEGDGASDGDSEGEGDFDSDGDGDG 602
Score = 31.6 bits (70), Expect = 0.055
Identities = 19/51 (37%), Positives = 22/51 (42%), Gaps = 12/51 (23%)
Frame = -1
Query: 50 EGDDGGSVSDDSDEDNDS-----------GDSEGDNGGDNDNDG-GDSDGG 88
+GD G DSD D D G GD GD D +G GD +GG
Sbjct: 655 DGDSEGEGDFDSDGDGDGEAGERFRG*GIGVDRGDGDGDGDGEGDGDGEGG 503
>TC86552 similar to PIR|G85436|G85436 hypothetical protein AT4g36980
[imported] - Arabidopsis thaliana, partial (59%)
Length = 1785
Score = 33.5 bits (75), Expect = 0.015
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +2
Query: 48 EGEGDDGGSVSDDSDEDNDSGDSEGDNGGDNDNDGG 83
+G G + +SDD DE+++ + + D D+ ND G
Sbjct: 674 DGNGKEESQISDDDDEEDEDDEDDEDFNSDDSNDEG 781
>TC77337 weakly similar to GP|4019275|gb|AAC95573.1| orf 48 {Ateline
herpesvirus 3}, partial (8%)
Length = 986
Score = 33.1 bits (74), Expect = 0.019
Identities = 11/39 (28%), Positives = 25/39 (63%)
Frame = +3
Query: 50 EGDDGGSVSDDSDEDNDSGDSEGDNGGDNDNDGGDSDGG 88
EG GG+ + +ED++ GD + ++ ++++D + +GG
Sbjct: 561 EGGAGGADENGEEEDDEDGDDQDEDDDEDEDDDDEEEGG 677
Score = 32.3 bits (72), Expect = 0.032
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +3
Query: 48 EGEGDDGGSVSDDSDEDNDSGDSEGDNGGDNDNDGG 83
+ EG+DG D+ D+D D EG++ +++ GG
Sbjct: 408 DAEGEDGNDDEDEEDDDGDGAFGEGEDELSSEDGGG 515
Score = 31.2 bits (69), Expect = 0.072
Identities = 14/36 (38%), Positives = 19/36 (51%)
Frame = +3
Query: 48 EGEGDDGGSVSDDSDEDNDSGDSEGDNGGDNDNDGG 83
E + +DG +D DED D D E GG+ D + G
Sbjct: 597 EEDDEDGDDQDEDDDEDEDDDDEE--EGGEEDEEEG 698
Score = 28.9 bits (63), Expect = 0.36
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +3
Query: 49 GEGDDGGSVSDDSDEDNDSGDSEGDNGGDNDN--DGGDSD 86
G D+ G DD ED D D + D D+D+ +GG+ D
Sbjct: 573 GGADENGEEEDD--EDGDDQDEDDDEDEDDDDEEEGGEED 686
>BG583961 similar to GP|14599408|em probable major surface glycoprotein
{Pneumocystis carinii}, partial (4%)
Length = 803
Score = 33.1 bits (74), Expect = 0.019
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +1
Query: 48 EGEGDDGGSVSDDSDEDNDSGDSEGDNGGDNDND 81
+ + D+ +D+D DND+ D++ DN DNDND
Sbjct: 598 DNDNDNDHDNDNDNDNDNDN-DNDHDNDNDNDND 696
Score = 32.3 bits (72), Expect = 0.032
Identities = 14/37 (37%), Positives = 21/37 (55%), Gaps = 3/37 (8%)
Frame = +1
Query: 48 EGEGDDGGSVSDDSDEDNDS---GDSEGDNGGDNDND 81
+ + D +D+D DND+ D++ DN DNDND
Sbjct: 604 DNDNDHDNDNDNDNDNDNDNDHDNDNDNDNDHDNDND 714
Score = 32.0 bits (71), Expect = 0.042
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +1
Query: 52 DDGGSVSDDSDEDNDSGDSEGDNGGDNDNDGGDSD 86
D+ D+D DND+ D++ DN DNDND D+D
Sbjct: 598 DNDNDNDHDNDNDNDN-DNDNDNDHDNDND-NDND 696
Score = 31.6 bits (70), Expect = 0.055
Identities = 13/24 (54%), Positives = 17/24 (70%), Gaps = 1/24 (4%)
Frame = +1
Query: 59 DDSDEDND-SGDSEGDNGGDNDND 81
+D+D DND D++ DN DNDND
Sbjct: 595 NDNDNDNDHDNDNDNDNDNDNDND 666
>TC89612 similar to GP|6934300|gb|AAF31706.1| unknown {Euphorbia esula},
complete
Length = 1504
Score = 32.7 bits (73), Expect = 0.025
Identities = 15/36 (41%), Positives = 21/36 (57%)
Frame = +3
Query: 52 DDGGSVSDDSDEDNDSGDSEGDNGGDNDNDGGDSDG 87
+DGG+ DD DN +G GD+GG + DG + G
Sbjct: 294 NDGGN--DDDGGDNFNGGGNGDDGGGEEEDGDEEFG 395
Score = 27.7 bits (60), Expect = 0.80
Identities = 12/42 (28%), Positives = 21/42 (49%)
Frame = +3
Query: 47 LEGEGDDGGSVSDDSDEDNDSGDSEGDNGGDNDNDGGDSDGG 88
LE D S+ + ++D G + GG+ D+ GG+ + G
Sbjct: 255 LEPSKSDQPSIGVNDGGNDDDGGDNFNGGGNGDDGGGEEEDG 380
Score = 25.8 bits (55), Expect = 3.0
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +3
Query: 49 GEGDDGGSVSDDSDED 64
G GDDGG +D DE+
Sbjct: 342 GNGDDGGGEEEDGDEE 389
>AW585081 similar to GP|6815137|dbj| pORF1 {TT virus}, partial (3%)
Length = 469
Score = 32.0 bits (71), Expect = 0.042
Identities = 14/29 (48%), Positives = 16/29 (54%)
Frame = -1
Query: 60 DSDEDNDSGDSEGDNGGDNDNDGGDSDGG 88
D DE+ GD DN + DND GD D G
Sbjct: 112 DGDEEEVDGDFLVDNNDNGDNDNGDDDCG 26
>TC91658 similar to GP|14329812|emb|CAC40753. putative nucleosome assembly
protein 1 {Atropa belladonna}, partial (46%)
Length = 583
Score = 31.6 bits (70), Expect = 0.055
Identities = 14/53 (26%), Positives = 26/53 (48%)
Frame = +2
Query: 34 TTTSEVVEAVVVVLEGEGDDGGSVSDDSDEDNDSGDSEGDNGGDNDNDGGDSD 86
T +++ V GE + + DED++ GD E D+ D+D+D + +
Sbjct: 2 TIRDKIIPHAVSWFTGEAGESDFDDIEVDEDDEDGDEEDDDDDDDDDDDEEDE 160
Score = 30.4 bits (67), Expect = 0.12
Identities = 13/38 (34%), Positives = 19/38 (49%)
Frame = +2
Query: 49 GEGDDGGSVSDDSDEDNDSGDSEGDNGGDNDNDGGDSD 86
GE D D+ DED D D + D+ D+D + D +
Sbjct: 56 GESDFDDIEVDEDDEDGDEEDDDDDDDDDDDEEDEDDE 169
Score = 28.1 bits (61), Expect = 0.61
Identities = 9/38 (23%), Positives = 22/38 (57%)
Frame = +2
Query: 45 VVLEGEGDDGGSVSDDSDEDNDSGDSEGDNGGDNDNDG 82
+ ++ + +DG DD D+D+D + + D+ +++ G
Sbjct: 77 IEVDEDDEDGDEEDDDDDDDDDDDEEDEDDEEEDEGKG 190
>AW696163 similar to GP|13359054|dbj contains ESTs D15403(C0585)
C98080(C0585)~unknown protein {Oryza sativa (japonica
cultivar-group)}, partial (9%)
Length = 571
Score = 31.6 bits (70), Expect = 0.055
Identities = 18/55 (32%), Positives = 25/55 (44%), Gaps = 2/55 (3%)
Frame = +3
Query: 30 VMAMTTTSEVVEAVVVVLEGEGDDGGSVSDDSDEDNDSGD--SEGDNGGDNDNDG 82
V+ T + V G+ D G+ S SDED D+ D+ DND+DG
Sbjct: 27 VVTFETKKMIKRRFFKVDHGDRDGSGNSSSSSDEDYDNNQVAQVSDDNDDNDSDG 191
>AA660309 similar to PIR|H84545|H84 probable ubiquitin-conjugating enzyme
[imported] - Arabidopsis thaliana, partial (4%)
Length = 600
Score = 31.6 bits (70), Expect = 0.055
Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 4/44 (9%)
Frame = +1
Query: 43 VVVVLEGEGDDGGSVSDDSDEDNDSGDSEGDNG----GDNDNDG 82
V +V E GD DSD D+ D EG+ G GD N+G
Sbjct: 256 VGIVTEVNGDSDSDSDSDSDTDSGVTDDEGEEGDVEEGDESNNG 387
Score = 27.3 bits (59), Expect = 1.0
Identities = 15/33 (45%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +1
Query: 57 VSDDSDEDNDSGDSEGDNG-GDNDNDGGDSDGG 88
V+ DSD D+DS DS+ D+G D++ + GD + G
Sbjct: 274 VNGDSDSDSDS-DSDTDSGVTDDEGEEGDVEEG 369
>TC80809 similar to GP|22136852|gb|AAM91770.1 unknown protein {Arabidopsis
thaliana}, partial (11%)
Length = 681
Score = 31.6 bits (70), Expect = 0.055
Identities = 20/51 (39%), Positives = 25/51 (48%), Gaps = 9/51 (17%)
Frame = +3
Query: 47 LEGEGDDG-------GSVSDDSDEDND--SGDSEGDNGGDNDNDGGDSDGG 88
L +GDD GS +D+D DND D E +G D D D DS+ G
Sbjct: 204 LSSDGDDQLADDFLQGSDDEDNDNDNDDEGSDLESGSGSDEDED-SDSESG 353
>TC93070 weakly similar to GP|17065230|gb|AAL32769.1 Unknown protein
{Arabidopsis thaliana}, partial (19%)
Length = 679
Score = 31.6 bits (70), Expect = 0.055
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 60 DSDEDNDSGDSEGDNGGDNDNDGGDSDGGW 89
+ DED D + E D+ D+D+D D D G+
Sbjct: 253 EDDEDEDEDEDEDDDDDDDDDDEDDDDDGF 342
Score = 30.4 bits (67), Expect = 0.12
Identities = 11/24 (45%), Positives = 16/24 (65%)
Frame = +1
Query: 59 DDSDEDNDSGDSEGDNGGDNDNDG 82
+D DED D D + D+ D+D+DG
Sbjct: 268 EDEDEDEDDDDDDDDDDEDDDDDG 339
>BF643828 similar to GP|15810439|gb| unknown protein {Arabidopsis
thaliana}, partial (8%)
Length = 386
Score = 31.2 bits (69), Expect = 0.072
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +2
Query: 48 EGEGDDGGSVSDDSDEDNDSGDSEGDNGGDNDNDGGDSDG 87
E + D+G S S +DSG S D+ D+ + G G
Sbjct: 26 ERQADNGSKTSSSSSSSSDSGSSSSDSDSDSSSASGSDAG 145
>BF632358 weakly similar to GP|19352296|gb MULTIPLE BANDED ANTIGEN
(FRAGMENT). 6/101 {Dictyostelium discoideum}, partial
(3%)
Length = 578
Score = 31.2 bits (69), Expect = 0.072
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +2
Query: 50 EGDDGGSVSDDSD-EDNDSGDSEGDNGGDNDNDGGDSDGG 88
E ++ SDD D +DND D+E N D+D+D G + G
Sbjct: 428 EDEEEEKDSDDVDYDDNDDHDAEEGNDSDDDDDDGSENLG 547
Score = 30.8 bits (68), Expect = 0.094
Identities = 13/42 (30%), Positives = 26/42 (60%)
Frame = +2
Query: 46 VLEGEGDDGGSVSDDSDEDNDSGDSEGDNGGDNDNDGGDSDG 87
++E E ++ S D D+++D EG++ D+D+DG ++ G
Sbjct: 422 MMEDEEEEKDSDDVDYDDNDDHDAEEGNDSDDDDDDGSENLG 547
>TC80981 similar to GP|8698730|gb|AAF78488.1| ESTs gb|Z18526 gb|AI994480
gb|T44186 gb|Z30806 come from this gene. {Arabidopsis
thaliana}, partial (37%)
Length = 699
Score = 31.2 bits (69), Expect = 0.072
Identities = 20/53 (37%), Positives = 29/53 (53%), Gaps = 7/53 (13%)
Frame = +3
Query: 41 EAVVVVLEGEG----DDG-GSVSDDSDEDNDSGDSEGDNGGDNDND--GGDSD 86
E VV +G+G D G G + ++ DED+D D D+ D+D + G DSD
Sbjct: 294 EEPVVDRKGKGIMRDDKGKGKMIEEEDEDDDDSDDSDDSDDDSDGNVSGSDSD 452
Score = 30.0 bits (66), Expect = 0.16
Identities = 14/32 (43%), Positives = 18/32 (55%)
Frame = +3
Query: 48 EGEGDDGGSVSDDSDEDNDSGDSEGDNGGDND 79
E E DD SDDSD+D+D S D+ +D
Sbjct: 369 EDEDDDDSDDSDDSDDDSDGNVSGSDSDFSDD 464
Score = 27.7 bits (60), Expect = 0.80
Identities = 14/39 (35%), Positives = 21/39 (52%)
Frame = +3
Query: 46 VLEGEGDDGGSVSDDSDEDNDSGDSEGDNGGDNDNDGGD 84
++E E +D DDSD+ +DS D N +D+D D
Sbjct: 357 MIEEEDED----DDDSDDSDDSDDDSDGNVSGSDSDFSD 461
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.305 0.135 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,894,930
Number of Sequences: 36976
Number of extensions: 21651
Number of successful extensions: 704
Number of sequences better than 10.0: 196
Number of HSP's better than 10.0 without gapping: 494
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 645
length of query: 89
length of database: 9,014,727
effective HSP length: 65
effective length of query: 24
effective length of database: 6,611,287
effective search space: 158670888
effective search space used: 158670888
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.8 bits)
S2: 51 (24.3 bits)
Lotus: description of TM0009.4