BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0008.10
(155 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC76580 homologue to PIR|S40240|S40240 ubiquitin/ribosomal prote... 314 8e-87
TC76581 homologue to PIR|S40240|S40240 ubiquitin/ribosomal prote... 314 1e-86
BF637347 homologue to PIR|T46664|T46 ubiquitin/S27a fusion prote... 254 7e-69
BF521342 similar to PIR|B31560|UQF ubiquitin / ribosomal protein... 210 2e-55
BQ156950 homologue to PIR|S40240|S402 ubiquitin/ribosomal protei... 166 3e-42
TC86564 PIR|C86439|C86439 protein T19E23.13 [imported] - Arabido... 150 2e-37
TC86563 PIR|C86439|C86439 protein T19E23.13 [imported] - Arabido... 150 2e-37
BF635478 PIR|C86439|C86 protein T19E23.13 [imported] - Arabidops... 150 2e-37
TC76388 homologue to PIR|S17435|S17435 polyubiquitin 6 - common ... 150 2e-37
BG646687 GP|902586|gb| ubiquitin {Zea mays}, partial (31%) 150 2e-37
TC76443 GP|15450587|gb|AAK96565.1 AT4g05050/T32N4_13 {Arabidopsi... 150 2e-37
CB891360 homologue to PIR|T02995|T02 unspecific monooxygenase (E... 150 2e-37
TC76317 PIR|S06921|UQPM polyubiquitin 5 - garden pea, complete 150 2e-37
TC86009 homologue to PIR|S28420|S28420 ubiquitin / ribosomal pro... 150 2e-37
TC76353 PIR|S06921|UQPM polyubiquitin 5 - garden pea, partial (89%) 150 2e-37
TC76349 GP|1332579|emb|CAA66667.1 polyubiquitin {Pinus sylvestri... 150 2e-37
TC85479 PIR|S20925|S20925 polyubiquitin - maize, complete 150 2e-37
TC86065 homologue to PIR|S28420|S28420 ubiquitin / ribosomal pro... 150 2e-37
TC76405 homologue to GP|6118549|gb|AAF04147.1| ubiquitin precurs... 150 2e-37
BG580602 PIR|S17435|S1 polyubiquitin 6 - common sunflower, parti... 150 2e-37
>TC76580 homologue to PIR|S40240|S40240 ubiquitin/ribosomal protein S27a
fusion protein - white lupine, complete
Length = 881
Score = 314 bits (805), Expect = 8e-87
Identities = 154/155 (99%), Positives = 154/155 (99%)
Frame = +2
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 164 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 343
Query: 61 IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHRKVKLAVLQFYKVDDSGKVQRLRKE 120
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHRKVKLAVLQFYKVDDSGKVQRLRKE
Sbjct: 344 IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHRKVKLAVLQFYKVDDSGKVQRLRKE 523
Query: 121 CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKAAA 155
CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKA A
Sbjct: 524 CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKAEA 628
>TC76581 homologue to PIR|S40240|S40240 ubiquitin/ribosomal protein S27a
fusion protein - white lupine, complete
Length = 665
Score = 314 bits (804), Expect = 1e-86
Identities = 154/155 (99%), Positives = 154/155 (99%)
Frame = +3
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 39 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 218
Query: 61 IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHRKVKLAVLQFYKVDDSGKVQRLRKE 120
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHRKVKLAVLQFYKVDDSGKVQRLRKE
Sbjct: 219 IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHRKVKLAVLQFYKVDDSGKVQRLRKE 398
Query: 121 CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKAAA 155
CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKA A
Sbjct: 399 CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKADA 503
>BF637347 homologue to PIR|T46664|T46 ubiquitin/S27a fusion protein
[imported] - Neurospora crassa, partial (98%)
Length = 642
Score = 254 bits (650), Expect = 7e-69
Identities = 126/153 (82%), Positives = 136/153 (88%), Gaps = 1/153 (0%)
Frame = +1
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 13 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 192
Query: 61 IQKESTLHLVLRLRGG-AKKRKKKTYTKPKKIKHKHRKVKLAVLQFYKVDDSGKVQRLRK 119
IQKESTLHLVLRLRGG AKKRKKK YT PKKIKHK +K KLAVL++YKVD GK++RLR+
Sbjct: 193 IQKESTLHLVLRLRGGMAKKRKKKVYTTPKKIKHKRKKTKLAVLKYYKVDSDGKIERLRR 372
Query: 120 ECPNAECGAGTFMANHFDRHYCGKCGLTYVYQK 152
ECP CGAG FMA DR YCG+C LTYV+ K
Sbjct: 373 ECPADTCGAGVFMAAMQDRQYCGRCHLTYVFDK 471
>BF521342 similar to PIR|B31560|UQF ubiquitin / ribosomal protein S27a -
fruit fly (Drosophila melanogaster), partial (66%)
Length = 482
Score = 210 bits (534), Expect = 2e-55
Identities = 108/153 (70%), Positives = 123/153 (79%), Gaps = 3/153 (1%)
Frame = +2
Query: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 62
IFVKTLTGKTITLEVES+DTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQ
Sbjct: 2 IFVKTLTGKTITLEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 181
Query: 63 KESTLHLVLRLRGG-AKKRKKKTYTKPKKIKHKHRKVKLAVLQ--FYKVDDSGKVQRLRK 119
KESTLHLVLRLRGG KKRKKK + PKK HKH+ V L ++ +Y+V + GKV R+
Sbjct: 182 KESTLHLVLRLRGGKKKKRKKKNFKSPKKAAHKHKNVPLLPIEKKYYEVTNDGKVVCNRR 361
Query: 120 ECPNAECGAGTFMANHFDRHYCGKCGLTYVYQK 152
CP +CG G MA H DR YCGKC L ++ QK
Sbjct: 362 TCP--KCGPGVLMAAHEDRQYCGKCHLVFLIQK 454
>BQ156950 homologue to PIR|S40240|S402 ubiquitin/ribosomal protein S27a
fusion protein - white lupine, partial (56%)
Length = 678
Score = 166 bits (420), Expect = 3e-42
Identities = 79/80 (98%), Positives = 79/80 (98%)
Frame = +2
Query: 64 ESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHRKVKLAVLQFYKVDDSGKVQRLRKECPN 123
ESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHRKVKLAVLQFYKVDDSGKVQRLRKECPN
Sbjct: 317 ESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHRKVKLAVLQFYKVDDSGKVQRLRKECPN 496
Query: 124 AECGAGTFMANHFDRHYCGK 143
AECGAGTFMANHFDRHY GK
Sbjct: 497 AECGAGTFMANHFDRHYXGK 556
>TC86564 PIR|C86439|C86439 protein T19E23.13 [imported] - Arabidopsis
thaliana, partial (97%)
Length = 839
Score = 150 bits (380), Expect = 2e-37
Identities = 77/82 (93%), Positives = 78/82 (94%)
Frame = +1
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 115 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 294
Query: 61 IQKESTLHLVLRLRGGAKKRKK 82
IQKESTLHLVLRLRGG + K
Sbjct: 295 IQKESTLHLVLRLRGGTMIKVK 360
Score = 97.4 bits (241), Expect = 2e-21
Identities = 46/74 (62%), Positives = 59/74 (79%)
Frame = +1
Query: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 62
I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T +YNI+
Sbjct: 349 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKEYNIE 528
Query: 63 KESTLHLVLRLRGG 76
S LHLVL LRGG
Sbjct: 529 GGSVLHLVLALRGG 570
>TC86563 PIR|C86439|C86439 protein T19E23.13 [imported] - Arabidopsis
thaliana, partial (97%)
Length = 835
Score = 150 bits (380), Expect = 2e-37
Identities = 77/82 (93%), Positives = 78/82 (94%)
Frame = +1
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 109 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 61 IQKESTLHLVLRLRGGAKKRKK 82
IQKESTLHLVLRLRGG + K
Sbjct: 289 IQKESTLHLVLRLRGGTMIKVK 354
Score = 97.4 bits (241), Expect = 2e-21
Identities = 46/74 (62%), Positives = 59/74 (79%)
Frame = +1
Query: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 62
I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T +YNI+
Sbjct: 343 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKEYNIE 522
Query: 63 KESTLHLVLRLRGG 76
S LHLVL LRGG
Sbjct: 523 GGSVLHLVLALRGG 564
>BF635478 PIR|C86439|C86 protein T19E23.13 [imported] - Arabidopsis thaliana,
partial (97%)
Length = 683
Score = 150 bits (380), Expect = 2e-37
Identities = 77/82 (93%), Positives = 78/82 (94%)
Frame = +3
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 66 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 245
Query: 61 IQKESTLHLVLRLRGGAKKRKK 82
IQKESTLHLVLRLRGG + K
Sbjct: 246 IQKESTLHLVLRLRGGTMIKVK 311
Score = 81.6 bits (200), Expect = 1e-16
Identities = 46/104 (44%), Positives = 59/104 (56%), Gaps = 30/104 (28%)
Frame = +3
Query: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR-------------------- 42
I VKTLTGK I +++E +DTID +K ++++KEGIPP QQR
Sbjct: 300 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRVLRGSHLVLIRTGTGQSCIS 479
Query: 43 ----------LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
LI+AGKQL D +T +YNI+ S LHLVL LRGG
Sbjct: 480 RISRDLHNFMLIYAGKQLADDKTAKEYNIEGGSVLHLVLALRGG 611
>TC76388 homologue to PIR|S17435|S17435 polyubiquitin 6 - common sunflower,
partial (47%)
Length = 757
Score = 150 bits (379), Expect = 2e-37
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = +1
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 325 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 504
Query: 61 IQKESTLHLVLRLRGG 76
IQKESTLHLVLRLRGG
Sbjct: 505 IQKESTLHLVLRLRGG 552
Score = 150 bits (379), Expect = 2e-37
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = +1
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 97 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 276
Query: 61 IQKESTLHLVLRLRGG 76
IQKESTLHLVLRLRGG
Sbjct: 277 IQKESTLHLVLRLRGG 324
Score = 120 bits (300), Expect = 3e-28
Identities = 61/67 (91%), Positives = 63/67 (93%)
Frame = +1
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPP+QQ+LIFAGK L GRTLADYN
Sbjct: 553 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPNQQKLIFAGKXLXXGRTLADYN 732
Query: 61 IQKESTL 67
I KESTL
Sbjct: 733 IXKESTL 753
>BG646687 GP|902586|gb| ubiquitin {Zea mays}, partial (31%)
Length = 493
Score = 150 bits (379), Expect = 2e-37
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = +1
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 130 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 309
Query: 61 IQKESTLHLVLRLRGG 76
IQKESTLHLVLRLRGG
Sbjct: 310 IQKESTLHLVLRLRGG 357
Score = 89.4 bits (220), Expect = 5e-19
Identities = 43/43 (100%), Positives = 43/43 (100%)
Frame = +1
Query: 34 EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct: 1 EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 129
>TC76443 GP|15450587|gb|AAK96565.1 AT4g05050/T32N4_13 {Arabidopsis
thaliana}, partial (66%)
Length = 668
Score = 150 bits (379), Expect = 2e-37
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = +2
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 248 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 427
Query: 61 IQKESTLHLVLRLRGG 76
IQKESTLHLVLRLRGG
Sbjct: 428 IQKESTLHLVLRLRGG 475
Score = 127 bits (320), Expect(2) = 2e-32
Identities = 64/64 (100%), Positives = 64/64 (100%)
Frame = +2
Query: 13 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 72
ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR
Sbjct: 56 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 235
Query: 73 LRGG 76
LRGG
Sbjct: 236 LRGG 247
Score = 27.3 bits (59), Expect(2) = 2e-32
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3
Query: 1 MQIFVKTLTGKT 12
MQIFVKTLTGKT
Sbjct: 21 MQIFVKTLTGKT 56
>CB891360 homologue to PIR|T02995|T02 unspecific monooxygenase (EC 1.14.14.1)
- common tobacco, partial (23%)
Length = 726
Score = 150 bits (379), Expect = 2e-37
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = +2
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 464 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 643
Query: 61 IQKESTLHLVLRLRGG 76
IQKESTLHLVLRLRGG
Sbjct: 644 IQKESTLHLVLRLRGG 691
>TC76317 PIR|S06921|UQPM polyubiquitin 5 - garden pea, complete
Length = 1375
Score = 150 bits (379), Expect = 2e-37
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = +1
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 277 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 456
Query: 61 IQKESTLHLVLRLRGG 76
IQKESTLHLVLRLRGG
Sbjct: 457 IQKESTLHLVLRLRGG 504
Score = 150 bits (379), Expect = 2e-37
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = +1
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 505 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 684
Query: 61 IQKESTLHLVLRLRGG 76
IQKESTLHLVLRLRGG
Sbjct: 685 IQKESTLHLVLRLRGG 732
Score = 150 bits (379), Expect = 2e-37
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = +1
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 733 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 912
Query: 61 IQKESTLHLVLRLRGG 76
IQKESTLHLVLRLRGG
Sbjct: 913 IQKESTLHLVLRLRGG 960
Score = 150 bits (379), Expect = 2e-37
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = +1
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 961 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 1140
Query: 61 IQKESTLHLVLRLRGG 76
IQKESTLHLVLRLRGG
Sbjct: 1141 IQKESTLHLVLRLRGG 1188
Score = 150 bits (379), Expect = 2e-37
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = +1
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 49 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 228
Query: 61 IQKESTLHLVLRLRGG 76
IQKESTLHLVLRLRGG
Sbjct: 229 IQKESTLHLVLRLRGG 276
>TC86009 homologue to PIR|S28420|S28420 ubiquitin / ribosomal protein CEP52
- wood tobacco, complete
Length = 714
Score = 150 bits (379), Expect = 2e-37
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = +3
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 39 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 218
Query: 61 IQKESTLHLVLRLRGG 76
IQKESTLHLVLRLRGG
Sbjct: 219 IQKESTLHLVLRLRGG 266
>TC76353 PIR|S06921|UQPM polyubiquitin 5 - garden pea, partial (89%)
Length = 1246
Score = 150 bits (379), Expect = 2e-37
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = +3
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 111 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 290
Query: 61 IQKESTLHLVLRLRGG 76
IQKESTLHLVLRLRGG
Sbjct: 291 IQKESTLHLVLRLRGG 338
Score = 150 bits (379), Expect = 2e-37
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = +3
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 567 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 746
Query: 61 IQKESTLHLVLRLRGG 76
IQKESTLHLVLRLRGG
Sbjct: 747 IQKESTLHLVLRLRGG 794
Score = 150 bits (379), Expect = 2e-37
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = +3
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 795 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 974
Query: 61 IQKESTLHLVLRLRGG 76
IQKESTLHLVLRLRGG
Sbjct: 975 IQKESTLHLVLRLRGG 1022
Score = 150 bits (379), Expect = 2e-37
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = +3
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 339 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 518
Query: 61 IQKESTLHLVLRLRGG 76
IQKESTLHLVLRLRGG
Sbjct: 519 IQKESTLHLVLRLRGG 566
Score = 73.9 bits (180), Expect = 2e-14
Identities = 36/36 (100%), Positives = 36/36 (100%)
Frame = +3
Query: 41 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct: 3 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 110
>TC76349 GP|1332579|emb|CAA66667.1 polyubiquitin {Pinus sylvestris}, partial
(70%)
Length = 2040
Score = 150 bits (379), Expect = 2e-37
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = +1
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 430 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 609
Query: 61 IQKESTLHLVLRLRGG 76
IQKESTLHLVLRLRGG
Sbjct: 610 IQKESTLHLVLRLRGG 657
Score = 150 bits (379), Expect = 2e-37
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = +1
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 658 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 837
Query: 61 IQKESTLHLVLRLRGG 76
IQKESTLHLVLRLRGG
Sbjct: 838 IQKESTLHLVLRLRGG 885
Score = 150 bits (379), Expect = 2e-37
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = +1
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 886 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 1065
Query: 61 IQKESTLHLVLRLRGG 76
IQKESTLHLVLRLRGG
Sbjct: 1066IQKESTLHLVLRLRGG 1113
Score = 150 bits (379), Expect = 2e-37
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = +1
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1114 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 1293
Query: 61 IQKESTLHLVLRLRGG 76
IQKESTLHLVLRLRGG
Sbjct: 1294 IQKESTLHLVLRLRGG 1341
Score = 150 bits (379), Expect = 2e-37
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = +1
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1342 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 1521
Query: 61 IQKESTLHLVLRLRGG 76
IQKESTLHLVLRLRGG
Sbjct: 1522 IQKESTLHLVLRLRGG 1569
Score = 150 bits (379), Expect = 2e-37
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = +1
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1570 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 1749
Query: 61 IQKESTLHLVLRLRGG 76
IQKESTLHLVLRLRGG
Sbjct: 1750 IQKESTLHLVLRLRGG 1797
Score = 150 bits (379), Expect = 2e-37
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = +1
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 202 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 381
Query: 61 IQKESTLHLVLRLRGG 76
IQKESTLHLVLRLRGG
Sbjct: 382 IQKESTLHLVLRLRGG 429
>TC85479 PIR|S20925|S20925 polyubiquitin - maize, complete
Length = 1983
Score = 150 bits (379), Expect = 2e-37
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = +2
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 484
Query: 61 IQKESTLHLVLRLRGG 76
IQKESTLHLVLRLRGG
Sbjct: 485 IQKESTLHLVLRLRGG 532
Score = 150 bits (379), Expect = 2e-37
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = +2
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 533 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 712
Query: 61 IQKESTLHLVLRLRGG 76
IQKESTLHLVLRLRGG
Sbjct: 713 IQKESTLHLVLRLRGG 760
Score = 150 bits (379), Expect = 2e-37
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = +2
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 761 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 940
Query: 61 IQKESTLHLVLRLRGG 76
IQKESTLHLVLRLRGG
Sbjct: 941 IQKESTLHLVLRLRGG 988
Score = 150 bits (379), Expect = 2e-37
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = +2
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 989 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 1168
Query: 61 IQKESTLHLVLRLRGG 76
IQKESTLHLVLRLRGG
Sbjct: 1169 IQKESTLHLVLRLRGG 1216
Score = 150 bits (379), Expect = 2e-37
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = +2
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1217 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 1396
Query: 61 IQKESTLHLVLRLRGG 76
IQKESTLHLVLRLRGG
Sbjct: 1397 IQKESTLHLVLRLRGG 1444
Score = 150 bits (379), Expect = 2e-37
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = +2
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1445 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 1624
Query: 61 IQKESTLHLVLRLRGG 76
IQKESTLHLVLRLRGG
Sbjct: 1625 IQKESTLHLVLRLRGG 1672
Score = 150 bits (379), Expect = 2e-37
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = +2
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 256
Query: 61 IQKESTLHLVLRLRGG 76
IQKESTLHLVLRLRGG
Sbjct: 257 IQKESTLHLVLRLRGG 304
>TC86065 homologue to PIR|S28420|S28420 ubiquitin / ribosomal protein CEP52
- wood tobacco, complete
Length = 1328
Score = 150 bits (379), Expect = 2e-37
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = +2
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 719 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 898
Query: 61 IQKESTLHLVLRLRGG 76
IQKESTLHLVLRLRGG
Sbjct: 899 IQKESTLHLVLRLRGG 946
>TC76405 homologue to GP|6118549|gb|AAF04147.1| ubiquitin precursor {Hevea
brasiliensis}, partial (55%)
Length = 694
Score = 150 bits (379), Expect = 2e-37
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = +1
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 55 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 234
Query: 61 IQKESTLHLVLRLRGG 76
IQKESTLHLVLRLRGG
Sbjct: 235 IQKESTLHLVLRLRGG 282
Score = 120 bits (301), Expect(2) = 9e-32
Identities = 60/61 (98%), Positives = 60/61 (98%)
Frame = +2
Query: 16 EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 75
EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL G
Sbjct: 329 EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLXG 508
Query: 76 G 76
G
Sbjct: 509 G 511
Score = 99.4 bits (246), Expect = 5e-22
Identities = 51/59 (86%), Positives = 51/59 (86%)
Frame = +2
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 59
MQIFVKTLTGKTITL ESSDTIDNVKAKI DKEGIPPDQQ LIFAGKQL TLADY
Sbjct: 512 MQIFVKTLTGKTITLXXESSDTIDNVKAKIXDKEGIPPDQQXLIFAGKQLXXXXTLADY 688
Score = 32.3 bits (72), Expect(2) = 9e-32
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +1
Query: 1 MQIFVKTLTGKTITL 15
MQIFVKTLTGKTITL
Sbjct: 283 MQIFVKTLTGKTITL 327
>BG580602 PIR|S17435|S1 polyubiquitin 6 - common sunflower, partial (47%)
Length = 657
Score = 150 bits (379), Expect = 2e-37
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = +2
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 371 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 550
Query: 61 IQKESTLHLVLRLRGG 76
IQKESTLHLVLRLRGG
Sbjct: 551 IQKESTLHLVLRLRGG 598
Score = 150 bits (379), Expect = 2e-37
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = +2
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 143 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 322
Query: 61 IQKESTLHLVLRLRGG 76
IQKESTLHLVLRLRGG
Sbjct: 323 IQKESTLHLVLRLRGG 370
Score = 97.1 bits (240), Expect = 3e-21
Identities = 47/47 (100%), Positives = 47/47 (100%)
Frame = +2
Query: 30 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct: 2 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 142
Score = 39.3 bits (90), Expect = 6e-04
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +2
Query: 1 MQIFVKTLTGKTITLEVES 19
MQIFVKTLTGKTITLEVES
Sbjct: 599 MQIFVKTLTGKTITLEVES 655
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.319 0.135 0.390
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,340,203
Number of Sequences: 36976
Number of extensions: 51130
Number of successful extensions: 509
Number of sequences better than 10.0: 108
Number of HSP's better than 10.0 without gapping: 422
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 499
length of query: 155
length of database: 9,014,727
effective HSP length: 88
effective length of query: 67
effective length of database: 5,760,839
effective search space: 385976213
effective search space used: 385976213
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)
Lotus: description of TM0008.10