TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0004a.3
         (148 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC89636 weakly similar to GP|10177420|dbj|BAB10705. auxin-induce...   199  3e-52
AL373405 similar to PIR|F86331|F863 hypothetical protein AAG1254...    73  5e-14
TC82431 weakly similar to GP|8777399|dbj|BAA96989.1 emb|CAB86483...    73  5e-14
TC78018 similar to PIR|T04499|T04499 auxin-induced protein homol...    64  2e-11
BF631741 similar to SP|P32295|ARG7_P Indole-3-acetic acid induce...    60  3e-10
TC78410 similar to PIR|A84906|A84906 probable auxin-regulated pr...    58  1e-09
BF519656 similar to SP|P32295|ARG7_P Indole-3-acetic acid induce...    57  4e-09
BI265290 similar to SP|P32295|ARG7_P Indole-3-acetic acid induce...    57  4e-09
BF634613 similar to SP|P33083|AX6B_S Auxin-induced protein 6B. [...    56  5e-09
TC80527 similar to GP|11994425|dbj|BAB02427. auxin-regulated pro...    56  5e-09
BM815670 similar to GP|20149050|gb| auxin-induced SAUR-like prot...    56  6e-09
BQ153323 similar to PIR|T06083|T0608 probable auxin-induced prot...    56  6e-09
TC84675 similar to GP|21553798|gb|AAM62891.1 unknown {Arabidopsi...    55  8e-09
TC88867 weakly similar to GP|9758890|dbj|BAB09466.1 auxin-induce...    55  8e-09
TC82710 similar to PIR|A84906|A84906 probable auxin-regulated pr...    55  1e-08
BQ152587 similar to SP|P33080|AX10_S Auxin-induced protein X10A....    54  3e-08
CB894182 similar to SP|P33083|AX6B_S Auxin-induced protein 6B. [...    53  5e-08
TC82137 similar to PIR|A84906|A84906 probable auxin-regulated pr...    52  7e-08
BQ153482 similar to PIR|T06083|T0608 probable auxin-induced prot...    52  1e-07
TC82358 weakly similar to PIR|F84787|F84787 probable auxin-induc...    52  1e-07

>TC89636 weakly similar to GP|10177420|dbj|BAB10705. auxin-induced
           protein-like {Arabidopsis thaliana}, partial (55%)
          Length = 881

 Score =  199 bits (506), Expect = 3e-52
 Identities = 107/160 (66%), Positives = 125/160 (77%), Gaps = 12/160 (7%)
 Frame = +2

Query: 1   MAGAMKKVDKIRQIVRLKQVMMRWKQISLRR-----HDSSDP------RPPSGCLYVYVG 49
           MAG MKKVDKIRQIVRLKQ+M RWKQISLRR       +++P      +PPSG ++VYVG
Sbjct: 77  MAGTMKKVDKIRQIVRLKQLMTRWKQISLRRCSLRSETTTEPCVNPRRQPPSGFVFVYVG 256

Query: 50  HERQRFAIPARFLNLPVFAGLLDETEEEFGLRGSGGLILPCDVCFFTHIVKRLHKNENKY 109
            ER RFAIPARFLN PVFAGLLD TEEEFGLRG+GGL+LPC V FFT IVKRLHKNE+KY
Sbjct: 257 SERHRFAIPARFLNFPVFAGLLDVTEEEFGLRGNGGLVLPCHVNFFTEIVKRLHKNEHKY 436

Query: 110 GKLTLEQFVITFSDAAANFDSCKD-QNVVVFTPLLQKAEV 148
           GKL+LE+FV   S+     +SCK+ +NVVV  PLL++A V
Sbjct: 437 GKLSLEEFVKMLSEVTL-LESCKEKENVVVLAPLLERAFV 553


>AL373405 similar to PIR|F86331|F863 hypothetical protein AAG12548.1
           [imported] - Arabidopsis thaliana, partial (64%)
          Length = 455

 Score = 72.8 bits (177), Expect = 5e-14
 Identities = 44/114 (38%), Positives = 61/114 (52%), Gaps = 3/114 (2%)
 Frame = +2

Query: 7   KVDKIRQIVRLKQVMMRWK---QISLRRHDSSDPRPPSGCLYVYVGHERQRFAIPARFLN 63
           K  KIR IVRL+Q++ RW+   +IS      SD   PSG + V VG    RF + A +LN
Sbjct: 56  KCSKIRHIVRLRQMLRRWRNKARISSANRAPSDV--PSGHVAVCVGANYTRFVVRATYLN 229

Query: 64  LPVFAGLLDETEEEFGLRGSGGLILPCDVCFFTHIVKRLHKNENKYGKLTLEQF 117
            P+F  LL + EEE+G    G L +PCD  FF   +  + ++ +  G    E F
Sbjct: 230 HPIFQKLLVQAEEEYGFSNHGPLTIPCDEEFFEEALWFISRSGSNNGSNRFEDF 391


>TC82431 weakly similar to GP|8777399|dbj|BAA96989.1
           emb|CAB86483.1~gene_id:MFB16.16~similar to unknown
           protein {Arabidopsis thaliana}, partial (33%)
          Length = 717

 Score = 72.8 bits (177), Expect = 5e-14
 Identities = 35/80 (43%), Positives = 46/80 (56%)
 Frame = +1

Query: 28  SLRRHDSSDPRPPSGCLYVYVGHERQRFAIPARFLNLPVFAGLLDETEEEFGLRGSGGLI 87
           S ++   S  +PP GCL VYVG ERQRF I  +  N P+F  LL++ E E+G R  G L 
Sbjct: 229 SHKKQKDSTKKPPHGCLCVYVGPERQRFVIKIKIFNHPLFKTLLEDVENEYGYRNDGPLW 408

Query: 88  LPCDVCFFTHIVKRLHKNEN 107
           LPCDV  F   +  +   E+
Sbjct: 409 LPCDVDLFCEALVEIESAED 468


>TC78018 similar to PIR|T04499|T04499 auxin-induced protein homolog
           F8F16.140 - Arabidopsis thaliana, partial (58%)
          Length = 803

 Score = 63.9 bits (154), Expect = 2e-11
 Identities = 42/126 (33%), Positives = 58/126 (45%), Gaps = 31/126 (24%)
 Frame = +2

Query: 6   KKVDKIRQIVRLKQVMMRWKQI-------------------------------SLRRHDS 34
           KK +KIR+IVRL+Q++ +W+++                               S R    
Sbjct: 158 KKPNKIREIVRLQQILKKWRRVANTSKTYRSSSINNNSTTSKSIKFLKRTLSMSEREGGG 337

Query: 35  SDPRPPSGCLYVYVGHERQRFAIPARFLNLPVFAGLLDETEEEFGLRGSGGLILPCDVCF 94
           S+   P G L V VG +  RF IP  +L    F  LL E EEEFG   +G L +PC+V  
Sbjct: 338 SNNAVPKGYLAVCVGVDLNRFVIPTEYLAHQAFHILLREAEEEFGFEQTGVLRIPCEVSV 517

Query: 95  FTHIVK 100
           F  I+K
Sbjct: 518 FESILK 535


>BF631741 similar to SP|P32295|ARG7_P Indole-3-acetic acid induced protein
           ARG7. [Mung bean  Vigna radiata] {Phaseolus aureus},
           partial (78%)
          Length = 450

 Score = 60.1 bits (144), Expect = 3e-10
 Identities = 32/76 (42%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
 Frame = +1

Query: 30  RRHDSSDPRPPSGCLYVYVGHERQRFAIPARFLNLPVFAGLLDETEEEFGL-RGSGGLIL 88
           R   S     P GCL VYVG E +RF IP  +LN P+F  LL++ EE+F     +GGL +
Sbjct: 1   RTSSSKGVEVPKGCLAVYVGEEMKRFVIPISYLNQPLFQDLLNQAEEQFEYDHPTGGLTI 180

Query: 89  PCDVCFFTHIVKRLHK 104
           PC    F  I   L +
Sbjct: 181 PCREDMFLDITSCLSR 228


>TC78410 similar to PIR|A84906|A84906 probable auxin-regulated protein
           [imported] - Arabidopsis thaliana, partial (61%)
          Length = 1073

 Score = 58.2 bits (139), Expect = 1e-09
 Identities = 28/68 (41%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
 Frame = +1

Query: 27  ISLRRHDSSDPRPPSGCLYVYVGH--ERQRFAIPARFLNLPVFAGLLDETEEEFGLRGSG 84
           ++   H   +   P GCL V VG   E+Q+F IP  ++N P+F  LL E EEE+G    G
Sbjct: 592 LNFHHHHEKNKDIPKGCLAVMVGQGEEQQKFVIPVIYINHPLFMQLLKEAEEEYGFDHKG 771

Query: 85  GLILPCDV 92
            +I+PC V
Sbjct: 772 PIIIPCQV 795


>BF519656 similar to SP|P32295|ARG7_P Indole-3-acetic acid induced protein
           ARG7. [Mung bean  Vigna radiata] {Phaseolus aureus},
           partial (80%)
          Length = 483

 Score = 56.6 bits (135), Expect = 4e-09
 Identities = 29/65 (44%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
 Frame = +2

Query: 40  PSGCLYVYVGHERQRFAIPARFLNLPVFAGLLDETEEEFGL-RGSGGLILPCDVCFFTHI 98
           P G L VYVG + +RF IP  +LN   F  LL + EEEFG     GGL +PC    F HI
Sbjct: 137 PKGYLAVYVGEQMKRFVIPTSYLNQASFQNLLSQAEEEFGYDHPMGGLTIPCTEDVFLHI 316

Query: 99  VKRLH 103
               +
Sbjct: 317 TSHFN 331


>BI265290 similar to SP|P32295|ARG7_P Indole-3-acetic acid induced protein
           ARG7. [Mung bean  Vigna radiata] {Phaseolus aureus},
           partial (67%)
          Length = 531

 Score = 56.6 bits (135), Expect = 4e-09
 Identities = 29/61 (47%), Positives = 35/61 (56%), Gaps = 1/61 (1%)
 Frame = +3

Query: 40  PSGCLYVYVGHERQRFAIPARFLNLPVFAGLLDETEEEFGL-RGSGGLILPCDVCFFTHI 98
           P GC+ VYVG   +RF IP   LN P F  LL + EEEFG     GGL +PC    F +I
Sbjct: 150 PKGCVAVYVGENMKRFVIPIGCLNQPSFQDLLSKAEEEFGYHHPMGGLTIPCSEDSFLNI 329

Query: 99  V 99
           +
Sbjct: 330 I 332


>BF634613 similar to SP|P33083|AX6B_S Auxin-induced protein 6B. [Soybean]
           {Glycine max}, partial (82%)
          Length = 368

 Score = 56.2 bits (134), Expect = 5e-09
 Identities = 30/75 (40%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
 Frame = +3

Query: 30  RRHDSSDPRPPSGCLYVYVGHERQRFAIPARFLNLPVFAGLLDETEEEFGL-RGSGGLIL 88
           R+  S       G + VYVG +  RF +P  +LN P F  LL ++EEEFG     GGL +
Sbjct: 3   RQATSKSVEVRKGYVAVYVGEKLVRFVVPVSYLNQPSFQDLLSQSEEEFGYDHPMGGLTI 182

Query: 89  PCDVCFFTHIVKRLH 103
           PC    F HI+  L+
Sbjct: 183 PCTEDVFQHIISSLN 227


>TC80527 similar to GP|11994425|dbj|BAB02427. auxin-regulated protein-like
           {Arabidopsis thaliana}, partial (62%)
          Length = 632

 Score = 56.2 bits (134), Expect = 5e-09
 Identities = 27/63 (42%), Positives = 38/63 (59%)
 Frame = +1

Query: 40  PSGCLYVYVGHERQRFAIPARFLNLPVFAGLLDETEEEFGLRGSGGLILPCDVCFFTHIV 99
           P G + +YVG E +RF + A  LN PVF  LL+E+ +E+G    G L LPC V  F  ++
Sbjct: 262 PEGHVPIYVGDEMERFVVCAELLNHPVFIKLLNESAQEYGYEQKGVLRLPCHVLVFERVL 441

Query: 100 KRL 102
           + L
Sbjct: 442 EAL 450


>BM815670 similar to GP|20149050|gb| auxin-induced SAUR-like protein
           {Capsicum annuum}, partial (80%)
          Length = 611

 Score = 55.8 bits (133), Expect = 6e-09
 Identities = 30/87 (34%), Positives = 41/87 (46%), Gaps = 3/87 (3%)
 Frame = +3

Query: 19  QVMMRWKQISLRRHDSSDPRP---PSGCLYVYVGHERQRFAIPARFLNLPVFAGLLDETE 75
           Q++ R      R+  + +  P   P G   VYVG  R R+ IP  +L  P F  LL   E
Sbjct: 3   QIVKRCSSFGKRQSYNEEGLPEDVPKGHFVVYVGENRTRYIIPISWLAHPQFQSLLQRAE 182

Query: 76  EEFGLRGSGGLILPCDVCFFTHIVKRL 102
           +EFG     GL +PCD  FF  +   +
Sbjct: 183 DEFGFNHDMGLTIPCDEVFFESLTSMM 263


>BQ153323 similar to PIR|T06083|T0608 probable auxin-induced protein
           T9A14.120 - Arabidopsis thaliana, partial (75%)
          Length = 455

 Score = 55.8 bits (133), Expect = 6e-09
 Identities = 29/65 (44%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
 Frame = +1

Query: 40  PSGCLYVYVGHERQRFAIPARFLNLPVFAGLLDETEEEFGL-RGSGGLILPCDVCFFTHI 98
           P G L VYVG + +RF IP  +LN   F  LL + EEEFG     GGL +PC    F HI
Sbjct: 64  PKGYLAVYVGEQMKRFVIPTSYLNQASFQTLLSQVEEEFGYDHPMGGLTIPCTEDVFLHI 243

Query: 99  VKRLH 103
               +
Sbjct: 244 TSHFN 258


>TC84675 similar to GP|21553798|gb|AAM62891.1 unknown {Arabidopsis
           thaliana}, partial (46%)
          Length = 599

 Score = 55.5 bits (132), Expect = 8e-09
 Identities = 25/67 (37%), Positives = 40/67 (59%)
 Frame = +1

Query: 40  PSGCLYVYVGHERQRFAIPARFLNLPVFAGLLDETEEEFGLRGSGGLILPCDVCFFTHIV 99
           P G L VYVG E +RF IP  +L+  +F  LL++  +EFG    GGL +PC++  F +++
Sbjct: 154 PKGYLAVYVGPELRRFIIPTSYLSHSLFKMLLEKAADEFGFNQCGGLTIPCEIETFKYLL 333

Query: 100 KRLHKNE 106
             +   +
Sbjct: 334 SCMENTQ 354


>TC88867 weakly similar to GP|9758890|dbj|BAB09466.1 auxin-induced
           protein-like {Arabidopsis thaliana}, partial (83%)
          Length = 453

 Score = 55.5 bits (132), Expect = 8e-09
 Identities = 32/90 (35%), Positives = 46/90 (50%), Gaps = 2/90 (2%)
 Frame = +3

Query: 15  VRLKQVMMRWKQISLRRHDSSDPRPPSGCLYVYVGH-ERQRFAIPARFLNLPVFAGLLDE 73
           +RL  + ++ KQI            P G + VYVG  +++RF +P  +LN P F  LL  
Sbjct: 72  IRLPFMALQAKQIFKSTSTQQQSNVPKGHIAVYVGELQKKRFVVPISYLNHPTFLDLLSS 251

Query: 74  TEEEFGL-RGSGGLILPCDVCFFTHIVKRL 102
            EEEFG     GGL +PC    F ++  +L
Sbjct: 252 VEEEFGYNHPMGGLTIPCKEDAFINLTSQL 341


>TC82710 similar to PIR|A84906|A84906 probable auxin-regulated protein
           [imported] - Arabidopsis thaliana, partial (58%)
          Length = 721

 Score = 54.7 bits (130), Expect = 1e-08
 Identities = 30/76 (39%), Positives = 41/76 (53%), Gaps = 8/76 (10%)
 Frame = +3

Query: 40  PSGCLYVYVGH--ERQRFAIPARFLNLPVFAGLLDETEEEFGLRGSGGLILPCDVCFFTH 97
           P GCL + VG   ++QRF +P  + N P+F  LL E EEE+G    G + +PC V  F +
Sbjct: 285 PKGCLAIKVGQGEDQQRFVVPVIYFNHPLFMQLLKEAEEEYGFDHKGAITIPCRVEEFRN 464

Query: 98  I------VKRLHKNEN 107
           I       K LH N +
Sbjct: 465 IRGLIDREKSLHHNHH 512


>BQ152587 similar to SP|P33080|AX10_S Auxin-induced protein X10A. [Soybean]
           {Glycine max}, partial (92%)
          Length = 475

 Score = 53.5 bits (127), Expect = 3e-08
 Identities = 29/65 (44%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
 Frame = +2

Query: 40  PSGCLYVYVGHERQRFAIPARFLNLPVFAGLLDETEEEFGL-RGSGGLILPCDVCFFTHI 98
           P G L VYVG E +RF IP  +L+   F  LL++ EE+FG     GGL +PC    F  I
Sbjct: 161 PKGYLAVYVGEEMKRFVIPISYLSQSSFQELLNQAEEQFGYDHPMGGLTIPCREDVFLDI 340

Query: 99  VKRLH 103
             RL+
Sbjct: 341 TSRLN 355


>CB894182 similar to SP|P33083|AX6B_S Auxin-induced protein 6B. [Soybean]
           {Glycine max}, partial (88%)
          Length = 827

 Score = 52.8 bits (125), Expect = 5e-08
 Identities = 29/65 (44%), Positives = 34/65 (51%), Gaps = 1/65 (1%)
 Frame = -1

Query: 40  PSGCLYVYVGHERQRFAIPARFLNLPVFAGLLDETEEEFGL-RGSGGLILPCDVCFFTHI 98
           P G L VYVG E +RF I   +LN   F  LL   E+EFG     GGL +PC    F HI
Sbjct: 608 PKGYLAVYVGEEMKRFVIHMSYLNQTSFQDLLSRAEDEFGYDHPMGGLTIPCREEVFLHI 429

Query: 99  VKRLH 103
             R +
Sbjct: 428 TSRFN 414


>TC82137 similar to PIR|A84906|A84906 probable auxin-regulated protein
           [imported] - Arabidopsis thaliana, partial (56%)
          Length = 674

 Score = 52.4 bits (124), Expect = 7e-08
 Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
 Frame = +2

Query: 25  KQISLRRHDSSDPRP----PSGCLYVYVG--HERQRFAIPARFLNLPVFAGLLDETEEEF 78
           K + L RH     +     P G + + VG   E+QRF +P  + N P+F  LL E EEE+
Sbjct: 215 KNLHLHRHHLQHKQEFKGVPKGFMAIKVGLGEEQQRFVVPVMYFNHPLFIQLLKEAEEEY 394

Query: 79  GLRGSGGLILPCDVCFFTHIVKRLHKNEN 107
           G    G + +PC V  F ++   + +++N
Sbjct: 395 GFDQKGTITIPCHVEEFRNVRGLIDRDKN 481


>BQ153482 similar to PIR|T06083|T0608 probable auxin-induced protein
           T9A14.120 - Arabidopsis thaliana, partial (72%)
          Length = 508

 Score = 51.6 bits (122), Expect = 1e-07
 Identities = 32/82 (39%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
 Frame = +3

Query: 23  RWKQISLRRHDSSDPRPPSGCLYVYVGHERQRFAIPARFLNLPVFAGLLDETEEEFGL-R 81
           R   I  R   S     P G L VYVG E +RF IP  +L    F  LL ++EE+F    
Sbjct: 108 RLPSIIKRASSSKSVGVPKGYLAVYVGEEMKRFVIPISYLKQKSFQELLSQSEEQFEYDH 287

Query: 82  GSGGLILPCDVCFFTHIVKRLH 103
             GGL +PC    F  I  RL+
Sbjct: 288 PMGGLTIPCGEDVFLDITSRLN 353


>TC82358 weakly similar to PIR|F84787|F84787 probable auxin-induced protein
           [imported] - Arabidopsis thaliana, partial (50%)
          Length = 546

 Score = 51.6 bits (122), Expect = 1e-07
 Identities = 30/100 (30%), Positives = 51/100 (51%), Gaps = 5/100 (5%)
 Frame = +3

Query: 5   MKKVDKIRQIVRLK----QVMMRWKQISLRRHDSSDPRP-PSGCLYVYVGHERQRFAIPA 59
           +++  K R+++R+      +   +   S ++ +   P+  P G L VYVG + +RF I  
Sbjct: 54  LREFSKFRKVIRVSFLKCAIRASFCSSSQQKSNLHIPKDVPKGHLVVYVGEDCKRFVIKV 233

Query: 60  RFLNLPVFAGLLDETEEEFGLRGSGGLILPCDVCFFTHIV 99
             LN P F  LLD  E+ FG      L++PC+   F +I+
Sbjct: 234 GTLNHPPFKALLDHAEDAFGFTNGSKLLIPCNENVFLNIL 353


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.326    0.141    0.426 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,734,279
Number of Sequences: 36976
Number of extensions: 63067
Number of successful extensions: 453
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 441
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 442
length of query: 148
length of database: 9,014,727
effective HSP length: 87
effective length of query: 61
effective length of database: 5,797,815
effective search space: 353666715
effective search space used: 353666715
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 54 (25.4 bits)