BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0593a.4
(944 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC16241 weakly similar to UP|Q91TH4 (Q91TH4) T122, partial (7%) 50 1e-06
TC8089 similar to UP|FLA1_ARATH (Q9FM65) Fasciclin-like arabinog... 47 2e-05
TC15102 similar to UP|Q7X9B3 (Q7X9B3) 9/13 hydroperoxide lyase, ... 45 5e-05
TC17551 weakly similar to UP|AAR24662 (AAR24662) At5g26960, part... 43 3e-04
TC10410 weakly similar to UP|Q8H5W8 (Q8H5W8) OJ1123_B01.10 prote... 42 3e-04
AV769326 42 6e-04
TC14277 similar to UP|Q9SHY3 (Q9SHY3) F1E22.9 (AT1G65720/F1E22_1... 41 0.001
TC15164 similar to UP|Q9ZTK7 (Q9ZTK7) CONSTANS-like protein 2, p... 40 0.001
TC13802 similar to UP|Q9M1T1 (Q9M1T1) Sugar-phosphate isomerase-... 40 0.002
TC17500 UP|Q9ZPL9 (Q9ZPL9) Nodule-enhanced protein phosphatase t... 39 0.003
TC14775 PIR|S14181|S14181 DNA-directed RNA polymerase largest c... 39 0.004
TC19569 similar to UP|AAR11301 (AAR11301) Lectin-like receptor k... 39 0.004
BP043764 39 0.004
TC8837 similar to UP|Q9LEU7 (Q9LEU7) Serine/threonine protein ki... 39 0.005
TC11113 weakly similar to UP|Q9SBM1 (Q9SBM1) Hydroxyproline-rich... 38 0.007
TC9746 38 0.007
TC15083 similar to UP|GAR1_YEAST (P28007) snoRNP protein GAR1, p... 38 0.009
TC13318 similar to UP|CAA20314 (CAA20314) SPBC30B4.01c protein (... 38 0.009
BP044109 38 0.009
BP041908 38 0.009
>TC16241 weakly similar to UP|Q91TH4 (Q91TH4) T122, partial (7%)
Length = 799
Score = 50.4 bits (119), Expect = 1e-06
Identities = 41/128 (32%), Positives = 52/128 (40%), Gaps = 8/128 (6%)
Frame = +1
Query: 493 PIPESQPAAQTTTP-PHSPRSS-------FFQPSPSEAPLWNLLQNPTSRSEDPTSLLTI 544
P P SQP T P HSP S PSPS P + L P +S PTS +
Sbjct: 43 PSPTSQPPYIATPPNTHSPTSQPPNTQTPANTPSPSSQPPY--LSTPP-KSNSPTSQPPV 213
Query: 545 PYDPLSSEPIIHDQPEPNQTEPQPRTSDHSAPRASERPAVRPTDTDSSTAFTPVSFPINT 604
P + PI P P P T+ P++ P+ + S A TP S P+
Sbjct: 214 AQTPRAVTPISSPSSSPTSNSPYPSTNP---------PSLAPSISTSPPALTPASTPVPA 366
Query: 605 IDSPPSNT 612
SPPS +
Sbjct: 367 TASPPSQS 390
>TC8089 similar to UP|FLA1_ARATH (Q9FM65) Fasciclin-like arabinogalactan
protein 1 precursor, partial (43%)
Length = 890
Score = 46.6 bits (109), Expect = 2e-05
Identities = 53/219 (24%), Positives = 85/219 (38%), Gaps = 9/219 (4%)
Frame = +2
Query: 435 PTRVEPAAATVRRTEPPARVTRSSAHSSKPALASDDDLNLFDALPISALLQHSSNPLTPI 494
PT++ P + +P R++R SS L P ++ S P +P
Sbjct: 122 PTQISPRQCSCSARQP-WRLSRQRCSSSPWLLPPQT--------PTTSPAFSPSTPSSP- 271
Query: 495 PESQPAAQTTTPPHSPRSSFFQPSPSEAPLW-----NLLQNPTSRSEDPTSLLTIPYDPL 549
P + + T+PP S +PS P W N Q+P SR+ P++ + P
Sbjct: 272 PSTTTSPSPTSPPRSTNGPQSPSAPSTTPPWTTSSQNTHQSPPSRTSSPSTSSSTTSAPR 451
Query: 550 SSEPIIHDQPEPNQTEPQPRTSDHSAPRASERPAVRPTDTDSSTAFTPVSFPINTID--- 606
SS P P Q +P + P +S P +DS+ T P+ + +
Sbjct: 452 SSTRSPTAPPSPPQC-TKPPAPPRAPPDSSTSPTSAAGKSDSAPRTTTAPSPLRSSNP*R 628
Query: 607 -SPPSNTSENMRKFMEVRKEKVSALEEHYLTCPSPRRYP 644
SP ++ S +F ++K L H L+ SP P
Sbjct: 629 KSPTTSPSSRSVRFFPPPQQK--PLHPHPLSRISPPLCP 739
>TC15102 similar to UP|Q7X9B3 (Q7X9B3) 9/13 hydroperoxide lyase, partial
(68%)
Length = 1097
Score = 45.1 bits (105), Expect = 5e-05
Identities = 49/180 (27%), Positives = 73/180 (40%), Gaps = 9/180 (5%)
Frame = +1
Query: 442 AATVRRTEPPARVTRSSAHSSKPALASDDDLNLFDALPISALLQHSSNP-----LTPIPE 496
A T T+ + + S+ P +S+ L A P + HSS P + P+
Sbjct: 181 ATTTSTTKAATNSSPPESRSTTPP-SSEPTCLLAPASPPTPKSSHSSTPPPSRSSSTTPK 357
Query: 497 SQPAAQTTTP----PHSPRSSFFQPSPSEAPLWNLLQNPTSRSEDPTSLLTIPYDPLSSE 552
S+ A T P P SP ++ P+PS+ P NP + S P+S + P ++
Sbjct: 358 SKNATSLTAPSCPPPASPAAT--APAPSKTP-----PNPPTNSSKPSSCKSSL--PNTTP 510
Query: 553 PIIHDQPEPNQTEPQPRTSDHSAPRASERPAVRPTDTDSSTAFTPVSFPINTIDSPPSNT 612
+ P T P S S+P E+PA P + + S PINT P S T
Sbjct: 511 SSLSSAPPSPTTSP---ISTPSSPENQEKPASTPPSAPPRSTSSSSSSPINTPRKPSSAT 681
>TC17551 weakly similar to UP|AAR24662 (AAR24662) At5g26960, partial (22%)
Length = 505
Score = 42.7 bits (99), Expect = 3e-04
Identities = 36/119 (30%), Positives = 49/119 (40%), Gaps = 9/119 (7%)
Frame = +3
Query: 488 SNPLTPIPESQPAAQTTTPPHSPRS---SFFQPSPSEAPLWNLLQNPTSRSEDPTSLLTI 544
+ P P P P + PP P S SF SP+ PL +L +P+S + PTS T
Sbjct: 66 TTPPPPPPPPSPNHRNNLPPPFPPSLTTSFSTSSPASHPLPSL-PSPSSAAVGPTSS-TP 239
Query: 545 PYDPLSSEPIIHD------QPEPNQTEPQPRTSDHSAPRASERPAVRPTDTDSSTAFTP 597
P P S+ P P P P +S + S PA P+ + ST +P
Sbjct: 240 PTSPTSAAAATSSATPPSPSPPPTSASPPPPSSTPNGTPPSSSPATTPSPSRPSTPSSP 416
Score = 31.2 bits (69), Expect = 0.80
Identities = 30/108 (27%), Positives = 39/108 (35%)
Frame = +1
Query: 474 LFDALPISALLQHSSNPLTPIPESQPAAQTTTPPHSPRSSFFQPSPSEAPLWNLLQNPTS 533
LF P+ L PL P P + PP P +P P L LL++P
Sbjct: 181 LFPPFPLPRL-----PPLVPPPPLPRLLRPPPPPPPPPP--LRPRPHRHRLRPLLRHPPR 339
Query: 534 RSEDPTSLLTIPYDPLSSEPIIHDQPEPNQTEPQPRTSDHSAPRASER 581
R +P +P PL + D P P P PR P+ R
Sbjct: 340 RQMEP-----LPLPPLLQRRLPRDLPLP----PLPRAPRFHRPQGFHR 456
>TC10410 weakly similar to UP|Q8H5W8 (Q8H5W8) OJ1123_B01.10 protein, partial
(12%)
Length = 431
Score = 42.4 bits (98), Expect = 3e-04
Identities = 41/165 (24%), Positives = 69/165 (40%), Gaps = 3/165 (1%)
Frame = +3
Query: 449 EPPARVTRSSAHSSKPALASDDDLNLFDALPISALLQHSSNPLTPIPESQPAAQTTTPPH 508
+PPA ++ +S+P+ + P S+L Q SS+ PI + PPH
Sbjct: 15 QPPATAAATARSTSEPSQSQPP------LQPPSSLPQTSSSTTPPI---------SAPPH 149
Query: 509 SPRSSFFQPSPSEAPLWNLLQNPTSRSEDPTSLLTIPYDPLSSEPIIHDQPEPNQTEPQP 568
P++ P+P+ P N NP + ++P PI + P P T PQP
Sbjct: 150 PPQN----PNPTPIPAPNPNPNPI-QIQNP-------------NPIHNPNPRPTPTPPQP 275
Query: 569 R---TSDHSAPRASERPAVRPTDTDSSTAFTPVSFPINTIDSPPS 610
R T + + P ++P+ + + P P ++ +S PS
Sbjct: 276 RPPPTFNRAPPPQQQQPSHFSHFSSLPPSSAPSPSPASSFNSTPS 410
Score = 38.1 bits (87), Expect = 0.007
Identities = 47/191 (24%), Positives = 68/191 (34%)
Frame = +3
Query: 545 PYDPLSSEPIIHDQPEPNQTEPQPRTSDHSAPRASERPAVRPTDTDSSTAFTPVSFPINT 604
P P ++ EP+Q++P P S P+ T SST TP PI+
Sbjct: 12 PQPPATAAATARSTSEPSQSQP-PLQPPSSLPQ-----------TSSST--TP---PISA 140
Query: 605 IDSPPSNTSENMRKFMEVRKEKVSALEEHYLTCPSPRRYPGPRPERLVDPDEPILANPIQ 664
PP N + P P P P P ++ +P NPI
Sbjct: 141 PPHPPQNPNPT----------------------PIPAPNPNPNPIQIQNP------NPIH 236
Query: 665 EADPLVQQEPIQPEPEPEHSVSNQSSVRSPHPLVETSDPHLGTSEPNAPMINIGSPQGAS 724
+P P QP P P + R+P P + P + + P + SP AS
Sbjct: 237 NPNPRPTPTPPQPRPPPTFN-------RAPPP--QQQQPSHFSHFSSLPPSSAPSPSPAS 389
Query: 725 EAHSSNHPTSP 735
+S+ P+ P
Sbjct: 390 SFNSTPSPSIP 422
Score = 33.1 bits (74), Expect = 0.21
Identities = 31/119 (26%), Positives = 46/119 (38%), Gaps = 4/119 (3%)
Frame = +3
Query: 651 LVDPDEPILANPIQEA--DPLVQQEPIQPEPE-PEHSVSNQSSVRSP-HPLVETSDPHLG 706
L+DP P A + +P Q P+QP P+ S S + +P HP + +
Sbjct: 3 LMDPQPPATAAATARSTSEPSQSQPPLQPPSSLPQTSSSTTPPISAPPHPPQNPNPTPIP 182
Query: 707 TSEPNAPMINIGSPQGASEAHSSNHPTSPESNLSIIPYTHRQPTSLSECIDIFYHEASL 765
PN I I +P + PT P+ P +R P + F H +SL
Sbjct: 183 APNPNPNPIQIQNPNPIHNPNPRPTPTPPQPRPP--PTFNRAPPPQQQQPSHFSHFSSL 353
>AV769326
Length = 262
Score = 41.6 bits (96), Expect = 6e-04
Identities = 30/92 (32%), Positives = 41/92 (43%), Gaps = 1/92 (1%)
Frame = +2
Query: 491 LTPIPESQPAAQTTTPPHSPRSSFFQPSPSEAPLWNLLQNPTSRSEDPTSLLTIPYDPLS 550
++ P PA T++P P ++ PSP P + NP S + DP S P
Sbjct: 2 ISSAPRCFPATTTSSPSSPPSTTPTTPSPPSDP-HSPPSNPPSAASDPNS-------PSL 157
Query: 551 SEPIIHDQPE-PNQTEPQPRTSDHSAPRASER 581
+ P + P P TEP +S SAP AS R
Sbjct: 158 TAPSLQKPPSSPTSTEPPSSSSTPSAPSASTR 253
Score = 28.1 bits (61), Expect = 6.8
Identities = 18/64 (28%), Positives = 26/64 (40%)
Frame = +2
Query: 677 PEPEPEHSVSNQSSVRSPHPLVETSDPHLGTSEPNAPMINIGSPQGASEAHSSNHPTSPE 736
P P + + S PH S+P S+PN+P + S Q + +S P S
Sbjct: 47 PSSPPSTTPTTPSPPSDPHS--PPSNPPSAASDPNSPSLTAPSLQKPPSSPTSTEPPSSS 220
Query: 737 SNLS 740
S S
Sbjct: 221 STPS 232
>TC14277 similar to UP|Q9SHY3 (Q9SHY3) F1E22.9 (AT1G65720/F1E22_13), partial
(33%)
Length = 941
Score = 40.8 bits (94), Expect = 0.001
Identities = 55/217 (25%), Positives = 77/217 (35%)
Frame = +3
Query: 468 SDDDLNLFDALPISALLQHSSNPLTPIPESQPAAQTTTPPHSPRSSFFQPSPSEAPLWNL 527
SD D L + + SS+P P P PAA +++PP S+ P+PS
Sbjct: 54 SDSDPWLLSSAASRSPPSSSSSPSPPPPPHAPAAASSSPP--TPSATLPPTPS------- 206
Query: 528 LQNPTSRSEDPTSLLTIPYDPLSSEPIIHDQPEPNQTEPQPRTSDHSAPRASERPAVRPT 587
P S DP+ L T +P +S + N++ P H+AP S
Sbjct: 207 ---PPSPRSDPSPLSTSTTNPTTSSSTT-PKTTTNKSNPNTARLSHAAP*GSP------- 353
Query: 588 DTDSSTAFTPVSFPINTIDSPPSNTSENMRKFMEVRKEKVSALEEHYLTCPSPRRYPGPR 647
P+ T SPPS T+ R R SAL+ L+ P P GP
Sbjct: 354 -------------PLLTTTSPPSVTAP--RTSSASRLPSSSALDA-ALSPPLPCTSSGPS 485
Query: 648 PERLVDPDEPILANPIQEADPLVQQEPIQPEPEPEHS 684
P A P P+ ++ P S
Sbjct: 486 -----SPPVTTTAPPCTAISPMTRRSTAPRRPATSRS 581
>TC15164 similar to UP|Q9ZTK7 (Q9ZTK7) CONSTANS-like protein 2, partial
(57%)
Length = 1185
Score = 40.4 bits (93), Expect = 0.001
Identities = 45/191 (23%), Positives = 78/191 (40%)
Frame = +2
Query: 422 PKKKQKKVRIVVKPTRVEPAAATVRRTEPPARVTRSSAHSSKPALASDDDLNLFDALPIS 481
P + + + I+ P + P +A + + P+ + ++ S+ P + L A S
Sbjct: 77 PSQPRLRCAILANP-HLPPCSAALTQ---PSSASPATPPSTPPTSSPPATLASLSARSAS 244
Query: 482 ALLQHSSNPLTPIPESQPAAQTTTPPHSPRSSFFQPSPSEAPLWNLLQNPTSRSEDPTSL 541
S LTP+P + P T+TPP +P + SPS ++ T+ + PTS
Sbjct: 245 KPPPPSPARLTPLPSASPVTTTSTPP-TPSPAATNASPSR-------RSTTTTTTPPTS- 397
Query: 542 LTIPYDPLSSEPIIHDQPEPNQTEPQPRTSDHSAPRASERPAVRPTDTDSSTAFTPVSFP 601
P L + P + +P P P P AP ++ P T SS+ ++
Sbjct: 398 ---PTPMLLTSPPMKLKPLPGYFLPLPTP---KAPISTPLTTPTPKSTPSSSISPKLTRQ 559
Query: 602 INTIDSPPSNT 612
T PP+ +
Sbjct: 560 SITAPPPPTES 592
>TC13802 similar to UP|Q9M1T1 (Q9M1T1) Sugar-phosphate isomerase-like
protein, partial (41%)
Length = 522
Score = 40.0 bits (92), Expect = 0.002
Identities = 46/164 (28%), Positives = 64/164 (38%), Gaps = 1/164 (0%)
Frame = +2
Query: 486 HSSNPLTPIPESQPAAQTTTPPHSPRSSFFQPSPSEAPLWNLLQNPTSRSEDPTSLLTIP 545
HS+ P S +TT+ SP S+ +PSPS AP + L+ P+S + +
Sbjct: 65 HSTLTKPPSQISSNPNKTTSTTSSPTSTTPKPSPSPAPS-STLRAPSSSPASASPASSPT 241
Query: 546 YDPLSSEPIIHDQPEPNQTEPQPRTSDHSAPRASERPAVRPTDTDSSTAFTPVSFPINTI 605
P S P P P TS+ S PT T SS++ +P
Sbjct: 242 KSPKPSSPSASAPPSSTPLTPSTATSESS-----------PTATSSSSSASP-------- 364
Query: 606 DSPPSNTSENMRKFMEVRKEKVSALEEHYL-TCPSPRRYPGPRP 648
+PP++ S R ALE L + PSP P P P
Sbjct: 365 -APPTSFSALSR-----------ALELKALASSPSPPSSPPPSP 460
Score = 33.1 bits (74), Expect = 0.21
Identities = 28/119 (23%), Positives = 47/119 (38%), Gaps = 6/119 (5%)
Frame = +2
Query: 646 PRPERLVDPDEPILANPIQEADPLVQQEPIQPEPEPEHSVSNQSSVRSPHPLVETSDPHL 705
P L P I +NP + P P+P S + S++R+P ++ P
Sbjct: 59 PLHSTLTKPPSQISSNPNKTTS--TTSSPTSTTPKPSPSPAPSSTLRAPSSSPASASPAS 232
Query: 706 G------TSEPNAPMINIGSPQGASEAHSSNHPTSPESNLSIIPYTHRQPTSLSECIDI 758
S P+A +P S A S + PT+ S+ S P ++LS +++
Sbjct: 233 SPTKSPKPSSPSASAPPSSTPLTPSTATSESSPTATSSSSSASPAPPTSFSALSRALEL 409
>TC17500 UP|Q9ZPL9 (Q9ZPL9) Nodule-enhanced protein phosphatase type 2C,
complete
Length = 1325
Score = 39.3 bits (90), Expect = 0.003
Identities = 40/142 (28%), Positives = 59/142 (41%), Gaps = 9/142 (6%)
Frame = -3
Query: 486 HSSNPLTPIPESQPAAQTTTPPHSPRSSFFQPSPSEA--------PLWNLLQNPTSRSED 537
H P P E+ + +PP P S QP P +A P L ++ +
Sbjct: 657 HYPPPHRPYYENTLPSLPPSPPPPPHSRTSQPPPPQADTAAPGTPPPPELRRDRQKQRSS 478
Query: 538 PTSLLTI-PYDPLSSEPIIHDQPEPNQTEPQPRTSDHSAPRASERPAVRPTDTDSSTAFT 596
TS T+ P P P P+PN+T + R + SAP + P + T S+ T
Sbjct: 477 RTSSRTLSPRSPRPPSPSCSPPPKPNRTAKRRRLA--SAP---DPPPMMM--TTKSSPGT 319
Query: 597 PVSFPINTIDSPPSNTSENMRK 618
+S + S PS T EN+R+
Sbjct: 318 VISAQTHESPSAPSPTEENLRR 253
>TC14775 PIR|S14181|S14181 DNA-directed RNA polymerase largest chain
(isoform B1) - soybean (fragment) {Glycine
max;} , partial (22%)
Length = 848
Score = 38.9 bits (89), Expect = 0.004
Identities = 36/119 (30%), Positives = 55/119 (45%), Gaps = 4/119 (3%)
Frame = +1
Query: 499 PAAQTTTPPHSPRSSFFQP-SPSEAPLWNLLQNPTSRSEDPTSLLTIP---YDPLSSEPI 554
P+ T+P +SP S + P SPS +P + +PTS S +P S P Y P S
Sbjct: 1 PSYSPTSPAYSPTSPGYSPTSPSYSPT-SPSYSPTSPSYNPQSAKYSPSLAYSPSS---- 165
Query: 555 IHDQPEPNQTEPQPRTSDHSAPRASERPAVRPTDTDSSTAFTPVSFPINTIDSPPSNTS 613
P + + P TS + +P + P+ + SS ++P S P N+ SP + S
Sbjct: 166 ----PRLSPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP-SSPYNSGVSPDYSPS 327
Score = 31.6 bits (70), Expect = 0.61
Identities = 31/113 (27%), Positives = 47/113 (41%), Gaps = 3/113 (2%)
Frame = +1
Query: 487 SSNPLTPIPESQPAAQTTTPPHSPRSSFFQPSPSEAPLWNLLQNPTSRSEDPTSLLTIPY 546
S +P +P Q A + + +SP S PS +P + +PTS S PTS P
Sbjct: 88 SYSPTSPSYNPQSAKYSPSLAYSPSSPRLSPSSPYSPT-SPNYSPTSPSYSPTSPSYSPS 264
Query: 547 DPLSSEPIIHD---QPEPNQTEPQPRTSDHSAPRASERPAVRPTDTDSSTAFT 596
P S ++ P+ + + PQ S +P +P P+ T T T
Sbjct: 265 SPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSP---SQPGYSPSSTSQYTPQT 414
Score = 27.7 bits (60), Expect = 8.8
Identities = 21/94 (22%), Positives = 38/94 (40%), Gaps = 1/94 (1%)
Frame = +1
Query: 489 NPLTPIPESQPAAQTTTPPHSPRSSFFQPSPSEAPLWNLLQNPTSRSEDP-TSLLTIPYD 547
+P +P + P T+P +SP S + PS +PT P S ++ Y
Sbjct: 175 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPS-----------SPTYSPSSPYNSGVSPDYS 321
Query: 548 PLSSEPIIHDQPEPNQTEPQPRTSDHSAPRASER 581
P S + P+Q P ++ P+ +++
Sbjct: 322 PSSPQFSPSTGYSPSQPGYSPSSTSQYTPQTNDK 423
>TC19569 similar to UP|AAR11301 (AAR11301) Lectin-like receptor kinase 1;1,
partial (16%)
Length = 486
Score = 38.9 bits (89), Expect = 0.004
Identities = 37/141 (26%), Positives = 55/141 (38%), Gaps = 6/141 (4%)
Frame = +1
Query: 479 PISALLQHSSNPLTPI-PESQPAAQTTTPPHSPRSSFFQPSPSEAPLW-NLLQNPTSRSE 536
P LL SS+ + P P+ Q T P + +S P PS + N P++ ++
Sbjct: 22 PCGLLLHTSSSSSSSYSPPPPPSQQPTHSPSTSPTSTTTPPPSPTKVTENPPTAPSTSTK 201
Query: 537 DPTSLLTIPYDPLSSEPIIHDQPEPNQT----EPQPRTSDHSAPRASERPAVRPTDTDSS 592
PTS + P + QP+ + T P P P A P+ P S
Sbjct: 202 SPTSSASEEPSPPNPSTSTTQQPKHSPTSPPASPSPSPPSTKPPTAMASPSTSPLSATKS 381
Query: 593 TAFTPVSFPINTIDSPPSNTS 613
TP + P + PP+ TS
Sbjct: 382 HP-TPPAAPSASSTPPPTTTS 441
Score = 38.5 bits (88), Expect = 0.005
Identities = 32/126 (25%), Positives = 47/126 (36%)
Frame = +1
Query: 487 SSNPLTPIPESQPAAQTTTPPHSPRSSFFQPSPSEAPLWNLLQNPTSRSEDPTSLLTIPY 546
S +T P + P+ T +P S P+PS + +PTS P+ P
Sbjct: 148 SPTKVTENPPTAPSTSTKSPTSSASEEPSPPNPSTSTTQQPKHSPTSPPASPS-----PS 312
Query: 547 DPLSSEPIIHDQPEPNQTEPQPRTSDHSAPRASERPAVRPTDTDSSTAFTPVSFPINTID 606
P + P P T P T H P A+ + P T +S + T+
Sbjct: 313 PPSTKPPTAMASP---STSPLSATKSHPTPPAAPSASSTPPPTTTS---------LKTMS 456
Query: 607 SPPSNT 612
SP S+T
Sbjct: 457 SPSSST 474
Score = 31.2 bits (69), Expect = 0.80
Identities = 26/108 (24%), Positives = 42/108 (38%), Gaps = 9/108 (8%)
Frame = +1
Query: 636 TCPSPRRYPGPRPERLVDPDEPILANPIQEADPLVQQEPIQPEP------EPEHSVSNQS 689
T P+ P P P ++ + + + +EP P P +P+HS ++
Sbjct: 115 TSPTSTTTPPPSPTKVTENPPTAPSTSTKSPTSSASEEPSPPNPSTSTTQQPKHSPTSPP 294
Query: 690 SVRSPHPLVETSDPHLGTSEPNAPMINIGS---PQGASEAHSSNHPTS 734
+ SP P T P S +P+ S P A A S+ PT+
Sbjct: 295 ASPSPSP-PSTKPPTAMASPSTSPLSATKSHPTPPAAPSASSTPPPTT 435
Score = 29.3 bits (64), Expect = 3.0
Identities = 24/96 (25%), Positives = 39/96 (40%), Gaps = 16/96 (16%)
Frame = +1
Query: 674 PIQPEPEPEHSVSNQ---SSVRSPHPLVETSDPHLGTSEPNAPMINIGSPQGASEAHSS- 729
P P +P HS S ++ P P T +P P AP + SP ++ S
Sbjct: 76 PPPPSQQPTHSPSTSPTSTTTPPPSPTKVTENP------PTAPSTSTKSPTSSASEEPSP 237
Query: 730 ------------NHPTSPESNLSIIPYTHRQPTSLS 753
+ PTSP ++ S P + + PT+++
Sbjct: 238 PNPSTSTTQQPKHSPTSPPASPSPSPPSTKPPTAMA 345
Score = 28.9 bits (63), Expect = 4.0
Identities = 22/95 (23%), Positives = 37/95 (38%), Gaps = 5/95 (5%)
Frame = +1
Query: 434 KPTRVEPAAATVRR-----TEPPARVTRSSAHSSKPALASDDDLNLFDALPISALLQHSS 488
+P+ P+ +T ++ T PPA + S + P + + P+SA H
Sbjct: 226 EPSPPNPSTSTTQQPKHSPTSPPASPSPSPPSTKPPTAMASPSTS-----PLSATKSH-- 384
Query: 489 NPLTPIPESQPAAQTTTPPHSPRSSFFQPSPSEAP 523
P P + P+A +T PP + S P
Sbjct: 385 ----PTPPAAPSASSTPPPTTTSLKTMSSPSSSTP 477
>BP043764
Length = 479
Score = 38.9 bits (89), Expect = 0.004
Identities = 34/120 (28%), Positives = 53/120 (43%), Gaps = 11/120 (9%)
Frame = +3
Query: 472 LNLFDALPISALLQHS---SNPLTPIPES--------QPAAQTTTPPHSPRSSFFQPSPS 520
L L + L+H+ S+ L P P+S +P TTTPP +P+ + +P P
Sbjct: 48 LTLIHSPQTPLFLRHTTTVSSSLKPPPDSNNSAAPFRRPLKTTTTPPSNPKPTP-KPKPK 224
Query: 521 EAPLWNLLQNPTSRSEDPTSLLTIPYDPLSSEPIIHDQPEPNQTEPQPRTSDHSAPRASE 580
AP N L+NP S T+ L + LS P P P P R ++ + + ++
Sbjct: 225 PAPTSNPLKNPFKSSHALTNKLWLT-SKLSPPPPPPPPPPPPPLPPPERETEIAEDKGAD 401
>TC8837 similar to UP|Q9LEU7 (Q9LEU7) Serine/threonine protein kinase-like
protein (CBL-interacting protein kinase 5), partial
(15%)
Length = 606
Score = 38.5 bits (88), Expect = 0.005
Identities = 40/133 (30%), Positives = 49/133 (36%)
Frame = -3
Query: 477 ALPISALLQHSSNPLTPIPESQPAAQTTTPPHSPRSSFFQPSPSEAPLWNLLQNPTSRSE 536
AL A L+HSS P P PA PP SP PSPS P
Sbjct: 373 ALYTPACLRHSSKTPPPPP---PAPPQIPPPSSP------PSPSSPP------------S 257
Query: 537 DPTSLLTIPYDPLSSEPIIHDQPEPNQTEPQPRTSDHSAPRASERPAVRPTDTDSSTAFT 596
P S P P SS P+ + P P S ++ S +D +TA T
Sbjct: 256 PPASAP*TPSSP*SSNSASSPPPQASPPPPTPTVSR*TSTATSSSSQTNSSDQTRATA-T 80
Query: 597 PVSFPINTIDSPP 609
+S T D+PP
Sbjct: 79 RLSQTRCTTDAPP 41
>TC11113 weakly similar to UP|Q9SBM1 (Q9SBM1) Hydroxyproline-rich
glycoprotein DZ-HRGP precursor, partial (10%)
Length = 309
Score = 38.1 bits (87), Expect = 0.007
Identities = 33/97 (34%), Positives = 40/97 (41%), Gaps = 1/97 (1%)
Frame = +1
Query: 455 TRSSAHS-SKPALASDDDLNLFDALPISALLQHSSNPLTPIPESQPAAQTTTPPHSPRSS 513
+ S +HS S P L L P + + HS P P S P +PP PRS
Sbjct: 34 SHSHSHSHSHPWLPFPISAPLRSQPPSTPAVHHSPLPYLPPSPSLP----NSPPPPPRSG 201
Query: 514 FFQPSPSEAPLWNLLQNPTSRSEDPTSLLTIPYDPLS 550
PSPSE P P + + PT T P PLS
Sbjct: 202 HHHPSPSEPPPPPQTTPPFTNPQTPTP-TTSPPSPLS 309
>TC9746
Length = 637
Score = 38.1 bits (87), Expect = 0.007
Identities = 40/136 (29%), Positives = 54/136 (39%), Gaps = 20/136 (14%)
Frame = +2
Query: 492 TPIPESQPAAQTTTPPH-------SPRSSFFQPSPSEAPLWNLLQNPTSRSEDP----TS 540
TP P S+P Q PPH SP S+ PS +P PTS S P T+
Sbjct: 170 TPSPTSKPKCQP--PPHPSSTATSSPASNSEPPSGPNSPARWGT*APTSPSSSPSL*STT 343
Query: 541 LLTIPYD--------PLSSEPIIHDQPEP-NQTEPQPRTSDHSAPRASERPAVRPTDTDS 591
L + P+ PL+S Q P + + P P +P P P+
Sbjct: 344 LTSPPHSSSPHSTTSPLASSSASPCQSSP*SPSPPSPSPKHPHSPSPRSPPPASPSPPYF 523
Query: 592 STAFTPVSFPINTIDS 607
S++ PVS P +T S
Sbjct: 524 SSSAPPVSCPSSTATS 571
>TC15083 similar to UP|GAR1_YEAST (P28007) snoRNP protein GAR1, partial (7%)
Length = 1367
Score = 37.7 bits (86), Expect = 0.009
Identities = 36/127 (28%), Positives = 53/127 (41%), Gaps = 1/127 (0%)
Frame = +2
Query: 484 LQHSSNPLTP-IPESQPAAQTTTPPHSPRSSFFQPSPSEAPLWNLLQNPTSRSEDPTSLL 542
L SS TP + + P+A PP S + PSP+ +PT+ S P +
Sbjct: 185 LNQSSETSTPNMAQLSPSASAPAPPSSSPT---APSPTVPSFKTPPYSPTALSPSPPAKS 355
Query: 543 TIPYDPLSSEPIIHDQPEPNQTEPQPRTSDHSAPRASERPAVRPTDTDSSTAFTPVSFPI 602
+ P S+ P++ P+ R S S +P + T SSTA P+ P
Sbjct: 356 SPPTSTTSALPLMAQPGVPSDATSPARCSTPPV*SPSHKPG-NGSSTRSSTA*NPL--PP 526
Query: 603 NTIDSPP 609
N I +PP
Sbjct: 527 NQILTPP 547
>TC13318 similar to UP|CAA20314 (CAA20314) SPBC30B4.01c protein (SPBC3D6.14C
protein) (Fragment), partial (15%)
Length = 543
Score = 37.7 bits (86), Expect = 0.009
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = +3
Query: 384 KMVLEESSEESDVPLVKKSKRKPDDDDDDDDDDGED 419
K V ++ EE D + + + DDDDDDDDDDGE+
Sbjct: 231 KPVQTDNEEEEDDDEEEDDEDEDDDDDDDDDDDGEE 338
Score = 33.5 bits (75), Expect = 0.16
Identities = 18/45 (40%), Positives = 21/45 (46%)
Frame = +3
Query: 376 PPKKKTKRKMVLEESSEESDVPLVKKSKRKPDDDDDDDDDDGEDG 420
PPK E+ EE D D+DDDDDDDD +DG
Sbjct: 225 PPKPVQTDNEEEEDDDEEED---------DEDEDDDDDDDDDDDG 332
Score = 31.6 bits (70), Expect = 0.61
Identities = 22/80 (27%), Positives = 33/80 (40%), Gaps = 6/80 (7%)
Frame = +3
Query: 373 FPSPPKKKTKRKMVLEESSEESDVPLVKKSKRKPDDDDDDDD------DDGEDGPPKKKQ 426
+P P K + EE +E + DDDDDDDD DD +D ++
Sbjct: 213 YPDGPPKPVQTDNEEEEDDDEEE----DDEDEDDDDDDDDDDDGEEEEDDDDDDEEEEGS 380
Query: 427 KKVRIVVKPTRVEPAAATVR 446
++V + K AA T +
Sbjct: 381 EEVEVEGKDGAKGAAAQTTK 440
>BP044109
Length = 497
Score = 37.7 bits (86), Expect = 0.009
Identities = 41/164 (25%), Positives = 59/164 (35%)
Frame = +2
Query: 449 EPPARVTRSSAHSSKPALASDDDLNLFDALPISALLQHSSNPLTPIPESQPAAQTTTPPH 508
+PP T S +HSS +L+S P P P P TTP H
Sbjct: 32 QPPHTATTSLSHSSSTSLSSSHFF-----------------PSPPPPPPPPNKNKTTPSH 160
Query: 509 SPRSSFFQPSPSEAPLWNLLQNPTSRSEDPTSLLTIPYDPLSSEPIIHDQPEPNQTEPQP 568
+ ++ + +P Q PT+ PTS P +++P T P
Sbjct: 161 ASNATS-KSTPRT-------QTPTTPPPSPTSSPKPPPSTFATKP---------STSPPE 289
Query: 569 RTSDHSAPRASERPAVRPTDTDSSTAFTPVSFPINTIDSPPSNT 612
S S A P+ + T +ST P +T+ SPP T
Sbjct: 290 TPSSSSHGPAPTLPSPPSSSTPTSTPSPPSPPNGSTLPSPPRAT 421
>BP041908
Length = 487
Score = 37.7 bits (86), Expect = 0.009
Identities = 38/135 (28%), Positives = 58/135 (42%), Gaps = 5/135 (3%)
Frame = +3
Query: 447 RTEPPARVTRS-SAHSSKPALASDDDLNLFDALPISALLQHSSNPLTPIPE-SQPAAQTT 504
RT R + S S SS + + + L+ A IS L H TP P S P +T
Sbjct: 84 RTRRTRRKSNSFSGPSSLTSTSPNTFLSTLTASKISLTLPHDPASSTPPPATSTPTTTST 263
Query: 505 TPPHSPRSSFFQPSPSEAPLWNLLQNPTS-RSEDPTS--LLTIPYDPLSSEPIIHDQPEP 561
+PP P + + S+ + +PT S P+S L + P+ P I P
Sbjct: 264 SPPGEPPPASTNSATSKKETSS*SSSPTPLNSSSPSSPHLTSAPWPP---PQIPSSPPRK 434
Query: 562 NQTEPQPRTSDHSAP 576
+ ++P+P T S+P
Sbjct: 435 SPSKPKPPTPSSSSP 479
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.313 0.130 0.375
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,928,892
Number of Sequences: 28460
Number of extensions: 261578
Number of successful extensions: 3649
Number of sequences better than 10.0: 344
Number of HSP's better than 10.0 without gapping: 2498
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3146
length of query: 944
length of database: 4,897,600
effective HSP length: 99
effective length of query: 845
effective length of database: 2,080,060
effective search space: 1757650700
effective search space used: 1757650700
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 60 (27.7 bits)
Lotus: description of TM0593a.4