BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0588c.4
(766 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BP053476 141 4e-34
AU089102 115 2e-26
BP030332 108 3e-24
AV413186 86 2e-17
BP081623 72 4e-13
BP066774 69 4e-12
TC19836 65 3e-11
BP038410 59 4e-09
AV769479 54 7e-08
AI967878 54 1e-07
AV773273 43 6e-06
TC20231 similar to UP|Q9SKQ4 (Q9SKQ4) At2g21090 protein, partial... 44 7e-05
AV779633 43 2e-04
AV409405 42 3e-04
BP063629 40 0.001
AV781023 40 0.001
TC20002 similar to UP|Q9FJY7 (Q9FJY7) Selenium-binding protein-l... 37 0.015
BP039174 35 0.059
TC15322 weakly similar to UP|Q9LG23 (Q9LG23) F14J16.14 (At1g5589... 35 0.059
AV408997 32 0.29
>BP053476
Length = 514
Score = 141 bits (355), Expect = 4e-34
Identities = 69/152 (45%), Positives = 93/152 (60%)
Frame = -3
Query: 615 IRKEMRDSRVKKQPGLSWVEVGKQVHEFTSGGHHHPHKEAIQSRLEILIGQLKEMGYVPE 674
IRK M VKK PG S VE+ +V+EFT G HP + + + LE + LK GYVP
Sbjct: 494 IRKSMLQDGVKKTPGYSLVELANRVYEFTLGDRSHPQSQDVYALLEKITELLKLEGYVPR 315
Query: 675 ITLALYDTEVEHKEDQLFHHSEKMALVFAIMNEGNLPCGGNVIKIMKNIRICADCHNFMK 734
L D E E KE L +HSEK+A+ F ++N G I++MKN+R+CADCH ++
Sbjct: 314 TENVLADIEEEEKEPALSYHSEKVAIAFMLLN----TAPGTPIRVMKNLRVCADCHMAIQ 147
Query: 735 LASNLFQKEIVVRDSNRFHHFKNATCSCNDYW 766
L S ++ +EIV+RD +RFH F+ CSC DYW
Sbjct: 146 LISKVYDREIVIRDRSRFHPFRGGKCSCKDYW 51
>AU089102
Length = 480
Score = 115 bits (289), Expect = 2e-26
Identities = 54/154 (35%), Positives = 88/154 (57%)
Frame = +2
Query: 483 KKLDVHPDSTTFVALLSACSHAGLVEEGVEIFNSMSDNHGIVPQLDHYACMVDLYGRVGK 542
++L + T+V LL+ACSHAGLV+EG++ F+ + N I + HYAC+VDL GR G+
Sbjct: 17 QELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEXHYACLVDLCGRAGR 196
Query: 543 ISEAEDLIHTMPMKPDSVIWSSLLGSCRKHGETRLARIAAEKFKELDPKNSLGYVQMSNI 602
+ E +I + +K +W LL C HG + ++ K +++ +N+ Y +SN+
Sbjct: 197 LKEXFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVTTKILKVEHENAGTYSLLSNM 376
Query: 603 YSSEGSFIEAGLIRKEMRDSRVKKQPGLSWVEVG 636
Y+S + + +M D +KKQP W+EVG
Sbjct: 377 YASXRXWKXXAPVXMKMNDKGLKKQPRCXWIEVG 478
>BP030332
Length = 466
Score = 108 bits (270), Expect = 3e-24
Identities = 52/109 (47%), Positives = 71/109 (64%)
Frame = -1
Query: 658 RLEILIGQLKEMGYVPEITLALYDTEVEHKEDQLFHHSEKMALVFAIMNEGNLPCGGNVI 717
+LE + +LK GY P++ D E + KE QL HSEK+AL F +++ LP G I
Sbjct: 463 KLEEXVSRLKLEGYEPDLNQVFLDFESDEKESQLVLHSEKVALAFGLLS---LP-QGLPI 296
Query: 718 KIMKNIRICADCHNFMKLASNLFQKEIVVRDSNRFHHFKNATCSCNDYW 766
I+KN+RIC DCH FM+L S ++++ IVVRD NRFHHF CSC ++W
Sbjct: 295 HIVKNLRICCDCHTFMQLVSKIYKRRIVVRDQNRFHHFDKGCCSCRNHW 149
>AV413186
Length = 398
Score = 85.9 bits (211), Expect = 2e-17
Identities = 47/132 (35%), Positives = 78/132 (58%), Gaps = 4/132 (3%)
Frame = +1
Query: 438 YARSGSLALSEQVFDEMCC-HDLVSWNSMLKSYALHGKAKDALELFKKL---DVHPDSTT 493
Y++ GSL + +VF+ + D+V WN+M+ + A HG +A+ + + V P+ T
Sbjct: 10 YSKCGSLETAWRVFNLVGNKQDVVLWNTMISALAHHGFGTEAMVMLNDMIRSGVEPNRAT 189
Query: 494 FVALLSACSHAGLVEEGVEIFNSMSDNHGIVPQLDHYACMVDLYGRVGKISEAEDLIHTM 553
FV LL+ACS +GLV+EG++ F M+ G+VP +HYAC+ DL R G E+ + +
Sbjct: 190 FVVLLNACSLSGLVQEGLQFFKFMTSEFGVVPDQEHYACLTDLLVRAGYFDES---VKGL 360
Query: 554 PMKPDSVIWSSL 565
+ ++ W+SL
Sbjct: 361 QIMDCTLGWNSL 396
Score = 43.9 bits (102), Expect = 1e-04
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Frame = +1
Query: 118 NMYSKCGHLEYARYVFDQM-PRRNIVSWTALISGYAQCGLIRECFYLFSGLL-AHYRPNE 175
+MYSKCG LE A VF+ + ++++V W +IS A G E + + ++ + PN
Sbjct: 4 DMYSKCGSLETAWRVFNLVGNKQDVVLWNTMISALAHHGFGTEAMVMLNDMIRSGVEPNR 183
Query: 176 FAFASLLSAC 185
F LL+AC
Sbjct: 184 ATFVVLLNAC 213
Score = 38.1 bits (87), Expect = 0.005
Identities = 32/127 (25%), Positives = 51/127 (39%), Gaps = 2/127 (1%)
Frame = +1
Query: 341 GQISDCYRLFLDTSGKQDIVSWTAIITVLADQD-PEQAFLLFCQLHRENFVPDWHTFSIA 399
G + +R+F KQD+V W +I+ LA +A ++ + R P+ TF +
Sbjct: 22 GSLETAWRVFNLVGNKQDVVLWNTMISALAHHGFGTEAMVMLNDMIRSGVEPNRATFVVL 201
Query: 400 LKACAYFVTEQQALAVHSQVIKR-GFQKDTVLSNALIHAYARSGSLALSEQVFDEMCCHD 458
L AC+ Q+ L + G D L R+G S + M C
Sbjct: 202 LNACSLSGLVQEGLQFFKFMTSEFGVVPDQEHYACLTDLLVRAGYFDESVKGLQIMDC-- 375
Query: 459 LVSWNSM 465
+ WNS+
Sbjct: 376 TLGWNSL 396
Score = 38.1 bits (87), Expect = 0.005
Identities = 25/82 (30%), Positives = 42/82 (50%), Gaps = 1/82 (1%)
Frame = +1
Query: 218 MYSKCSGGFHGGYDPTGDDAWTMFKSM-EFRNLISWNSMIAGFQFRGLGDKAIRLFAHMY 276
MYSKC + + AW +F + ++++ WN+MI+ G G +A+ + M
Sbjct: 7 MYSKCG---------SLETAWRVFNLVGNKQDVVLWNTMISALAHHGFGTEAMVMLNDMI 159
Query: 277 CSGIGFDRATLLSVFSSLNECS 298
SG+ +RAT + + LN CS
Sbjct: 160 RSGVEPNRATFVVL---LNACS 216
Score = 28.9 bits (63), Expect = 3.2
Identities = 10/39 (25%), Positives = 22/39 (55%)
Frame = +1
Query: 535 DLYGRVGKISEAEDLIHTMPMKPDSVIWSSLLGSCRKHG 573
D+Y + G + A + + + K D V+W++++ + HG
Sbjct: 4 DMYSKCGSLETAWRVFNLVGNKQDVVLWNTMISALAHHG 120
>BP081623
Length = 461
Score = 71.6 bits (174), Expect = 4e-13
Identities = 33/85 (38%), Positives = 53/85 (61%)
Frame = -2
Query: 561 IWSSLLGSCRKHGETRLARIAAEKFKELDPKNSLGYVQMSNIYSSEGSFIEAGLIRKEMR 620
+W +LLG+CR +G+ L R AAE EL P++ Y+ ++N+Y+ + +A +R+ M+
Sbjct: 460 VWGALLGACRIYGDVGLGRWAAEHLFELKPQHCGYYILLANMYAEIERWDDANKVRQLMK 281
Query: 621 DSRVKKQPGLSWVEVGKQVHEFTSG 645
KK PG SWV+VG ++H F G
Sbjct: 280 SRGAKKNPGCSWVKVGDKMHAFLVG 206
>BP066774
Length = 516
Score = 68.6 bits (166), Expect = 4e-12
Identities = 32/78 (41%), Positives = 44/78 (56%)
Frame = -1
Query: 687 KEDQLFHHSEKMALVFAIMNEGNLPCGGNVIKIMKNIRICADCHNFMKLASNLFQKEIVV 746
K D HSE+ A+ F ++N G I + KN+ +C CHN +K S ++EI V
Sbjct: 483 KXDIFCGHSERQAIAFGLLNSAP----GMPIWVTKNLYMCQSCHNIVKFISKEVRREISV 316
Query: 747 RDSNRFHHFKNATCSCND 764
RD+ RFHHF+ CSC D
Sbjct: 315 RDAERFHHFRGGICSCMD 262
>TC19836
Length = 464
Score = 65.5 bits (158), Expect = 3e-11
Identities = 30/87 (34%), Positives = 49/87 (55%)
Frame = +2
Query: 552 TMPMKPDSVIWSSLLGSCRKHGETRLARIAAEKFKELDPKNSLGYVQMSNIYSSEGSFIE 611
TMPMKP + IWSSL+ +C+ HG +A + + +P N+ Y ++ IY+ G ++
Sbjct: 5 TMPMKPSTRIWSSLVSACKLHGRLDIAEMLGPQLIRSEPDNAANYTLLNMIYAEHGHWLH 184
Query: 612 AGLIRKEMRDSRVKKQPGLSWVEVGKQ 638
+ + M+ R+KK G S +E G Q
Sbjct: 185 KEQVMEAMKLQRLKKCYGFSRIETGNQ 265
>BP038410
Length = 468
Score = 58.5 bits (140), Expect = 4e-09
Identities = 41/146 (28%), Positives = 68/146 (46%), Gaps = 3/146 (2%)
Frame = -2
Query: 358 DIVSWTAIITVLADQDPEQAFLLFCQLHRENFVPDWHTFSIALKACAYFVTEQQALAVHS 417
D+VSW ++ F LF ++ + T I L A ++H
Sbjct: 404 DLVSWNSV------------FDLFTKMCWSGLIASASTVLILLPAAGDTGNFVVGKSLHG 261
Query: 418 QVIKRGFQKDTVLSNALIHAYARSGSLALSEQVFDEMCCHDLVSWNSMLKSYALHGKAKD 477
I+ GF + ALI YA++G + ++FD + D+V WN ++ +YA +G +
Sbjct: 260 YYIQIGFSSHLNVLTALIDMYAKTGLVHWGRKIFDSLVDKDVVLWNCLIGNYARNGLVGE 81
Query: 478 ALELFKKLDVH---PDSTTFVALLSA 500
AL L +K+ + +S+TFV LL A
Sbjct: 80 ALYLLQKMRIQGMKTNSSTFVGLLLA 3
Score = 52.8 bits (125), Expect = 2e-07
Identities = 29/94 (30%), Positives = 48/94 (50%), Gaps = 1/94 (1%)
Frame = -2
Query: 92 GMALHNYILHKDPTIQNDLFLTNHLVNMYSKCGHLEYARYVFDQMPRRNIVSWTALISGY 151
G +LH Y + + L + L++MY+K G + + R +FD + +++V W LI Y
Sbjct: 278 GKSLHGYYIQIG--FSSHLNVLTALIDMYAKTGLVHWGRKIFDSLVDKDVVLWNCLIGNY 105
Query: 152 AQCGLIRECFYLFSGL-LAHYRPNEFAFASLLSA 184
A+ GL+ E YL + + + N F LL A
Sbjct: 104 ARNGLVGEALYLLQKMRIQGMKTNSSTFVGLLLA 3
Score = 39.3 bits (90), Expect = 0.002
Identities = 34/151 (22%), Positives = 67/151 (43%)
Frame = -2
Query: 140 NIVSWTALISGYAQCGLIRECFYLFSGLLAHYRPNEFAFASLLSACEEHDIKCGMQVHAV 199
++VSW ++ + + +SGL+A L +A + + G +H
Sbjct: 404 DLVSWNSVFDLFTKM--------CWSGLIASAST---VLILLPAAGDTGNFVVGKSLHGY 258
Query: 200 ALKISLDASVYVANALITMYSKCSGGFHGGYDPTGDDAWTMFKSMEFRNLISWNSMIAGF 259
++I + + V ALI MY+K +G H G +F S+ ++++ WN +I +
Sbjct: 257 YIQIGFSSHLNVLTALIDMYAK-TGLVHWGR--------KIFDSLVDKDVVLWNCLIGNY 105
Query: 260 QFRGLGDKAIRLFAHMYCSGIGFDRATLLSV 290
GL +A+ L M G+ + +T + +
Sbjct: 104 ARNGLVGEALYLLQKMRIQGMKTNSSTFVGL 12
Score = 34.3 bits (77), Expect = 0.077
Identities = 28/120 (23%), Positives = 53/120 (43%), Gaps = 3/120 (2%)
Frame = -2
Query: 457 HDLVSWNSMLKSYALHGKAKDALELFKKL---DVHPDSTTFVALLSACSHAGLVEEGVEI 513
+DLVSWNS+ +LF K+ + ++T + LL A G G +
Sbjct: 407 NDLVSWNSV-------------FDLFTKMCWSGLIASASTVLILLPAAGDTGNFVVGKSL 267
Query: 514 FNSMSDNHGIVPQLDHYACMVDLYGRVGKISEAEDLIHTMPMKPDSVIWSSLLGSCRKHG 573
+ G L+ ++D+Y + G + + ++ K D V+W+ L+G+ ++G
Sbjct: 266 -HGYYIQIGFSSHLNVLTALIDMYAKTGLVHWGRKIFDSLVDK-DVVLWNCLIGNYARNG 93
>AV769479
Length = 287
Score = 54.3 bits (129), Expect = 7e-08
Identities = 29/86 (33%), Positives = 45/86 (51%)
Frame = +1
Query: 83 CAKNKCLQQGMALHNYILHKDPTIQNDLFLTNHLVNMYSKCGHLEYARYVFDQMPRRNIV 142
C+K L G +H +IL +L N VN Y++CG + A FD+M +R++V
Sbjct: 25 CSKRVDLALGKQIHAHILKSK---WRNLIADNAFVNFYAECGKISSAFRTFDRMAKRDVV 195
Query: 143 SWTALISGYAQCGLIRECFYLFSGLL 168
WT +I+ +Q GL E + S +L
Sbjct: 196 CWTTIITACSQQGLGHEALLILSQML 273
Score = 37.7 bits (86), Expect = 0.007
Identities = 24/91 (26%), Positives = 42/91 (45%)
Frame = +1
Query: 189 DIKCGMQVHAVALKISLDASVYVANALITMYSKCSGGFHGGYDPTGDDAWTMFKSMEFRN 248
D+ G Q+HA LK S ++ NA + Y++C A+ F M R+
Sbjct: 40 DLALGKQIHAHILK-SKWRNLIADNAFVNFYAECG---------KISSAFRTFDRMAKRD 189
Query: 249 LISWNSMIAGFQFRGLGDKAIRLFAHMYCSG 279
++ W ++I +GLG +A+ + + M G
Sbjct: 190 VVCWTTIITACSQQGLGHEALLILSQMLGDG 282
Score = 36.6 bits (83), Expect = 0.015
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Frame = +1
Query: 294 LNECSAFDELNIPLRNCFVLHCLATK-TGLISEVEVVTALVKSYANLGGQISDCYRLFLD 352
+N CS +++ L H L +K LI++ A V YA G +IS +R F D
Sbjct: 16 MNLCSK--RVDLALGKQIHAHILKSKWRNLIAD----NAFVNFYAECG-KISSAFRTF-D 171
Query: 353 TSGKQDIVSWTAIITVLADQD-PEQAFLLFCQLHRENF 389
K+D+V WT IIT + Q +A L+ Q+ + F
Sbjct: 172 RMAKRDVVCWTTIITACSQQGLGHEALLILSQMLGDGF 285
>AI967878
Length = 393
Score = 53.5 bits (127), Expect = 1e-07
Identities = 33/120 (27%), Positives = 52/120 (42%), Gaps = 23/120 (19%)
Frame = +1
Query: 458 DLVSWNSMLKSYALHGKAKDALELFKKL-----------------------DVHPDSTTF 494
+LVSWN+M+ + +HG +D L LF ++ + PD TF
Sbjct: 34 NLVSWNAMILGHCIHGNPEDGLSLFDEMVGMDKVKGEVEIDESPCADRGVVRLPPDEVTF 213
Query: 495 VALLSACSHAGLVEEGVEIFNSMSDNHGIVPQLDHYACMVDLYGRVGKISEAEDLIHTMP 554
+ +L AC+ A L+ EG F M+D G+ P L Y G + + + + T P
Sbjct: 214 IGILCACARAELLAEGRSYFKQMTDVFGLKPILLIYGAWPICLQMHGLLMKPKSVCGTWP 393
Score = 30.8 bits (68), Expect = 0.85
Identities = 15/38 (39%), Positives = 21/38 (54%)
Frame = +1
Query: 247 RNLISWNSMIAGFQFRGLGDKAIRLFAHMYCSGIGFDR 284
RNL+SWN+MI G G + + LF M +G D+
Sbjct: 31 RNLVSWNAMILGHCIHGNPEDGLSLFDEM----VGMDK 132
>AV773273
Length = 356
Score = 43.1 bits (100), Expect(2) = 6e-06
Identities = 16/42 (38%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Frame = -3
Query: 715 NVIKIMKNIRICADCHN-FMKLASNLFQKEIVVRDSNRFHHF 755
++++ ++ R+C DCHN + L +E++VRD+ RFHHF
Sbjct: 312 HLLESLRTFRVCGDCHNRHSRSCPGLVGRELIVRDNKRFHHF 187
Score = 24.3 bits (51), Expect(2) = 6e-06
Identities = 8/18 (44%), Positives = 11/18 (60%)
Frame = -1
Query: 749 SNRFHHFKNATCSCNDYW 766
+N F ++ CSC DYW
Sbjct: 206 TNAFIISQDGKCSCGDYW 153
>TC20231 similar to UP|Q9SKQ4 (Q9SKQ4) At2g21090 protein, partial (5%)
Length = 550
Score = 44.3 bits (103), Expect = 7e-05
Identities = 23/55 (41%), Positives = 31/55 (55%)
Frame = +3
Query: 623 RVKKQPGLSWVEVGKQVHEFTSGGHHHPHKEAIQSRLEILIGQLKEMGYVPEITL 677
RV+K L+W+E+ +VH FT HP KE I S L L Q++ G P +TL
Sbjct: 57 RVRKDQALTWIEIENKVHAFTVSDGSHPLKETIYSSLGYLSSQMQ--GQAPLLTL 215
>AV779633
Length = 440
Score = 42.7 bits (99), Expect = 2e-04
Identities = 32/117 (27%), Positives = 56/117 (47%)
Frame = -2
Query: 411 QALAVHSQVIKRGFQKDTVLSNALIHAYARSGSLALSEQVFDEMCCHDLVSWNSMLKSYA 470
QALA+ K G + D V N+L+ + ++G L +E +FDE+ + LK+ A
Sbjct: 361 QALALMENSWKTGVKPDIVSYNSLLKGFCKAGDLVRAESLFDEILGFQRDGESGQLKNNA 182
Query: 471 LHGKAKDALELFKKLDVHPDSTTFVALLSACSHAGLVEEGVEIFNSMSDNHGIVPQL 527
+ +D L ++ P T+ L+SA +EE ++ M + GI+P +
Sbjct: 181 V--DTRDELR-----NIRPTLATYTTLISAYGKHCGIEESRSLYEQMVMS-GIMPDV 35
>AV409405
Length = 424
Score = 42.4 bits (98), Expect = 3e-04
Identities = 20/77 (25%), Positives = 39/77 (49%)
Frame = +1
Query: 409 EQQALAVHSQVIKRGFQKDTVLSNALIHAYARSGSLALSEQVFDEMCCHDLVSWNSMLKS 468
E+ +HS +K G D+ + L Y + S+ + ++FDE + WN++L+
Sbjct: 184 EKSTSQLHSLCLKLGLTHDSFIVTKLNVLYGKHASIHHAHKLFDETPDKSVYLWNALLRR 363
Query: 469 YALHGKAKDALELFKKL 485
Y G+ + L LF+++
Sbjct: 364 YRAEGEWAETLSLFRRM 414
Score = 37.4 bits (85), Expect = 0.009
Identities = 26/88 (29%), Positives = 39/88 (43%)
Frame = +1
Query: 77 ASLFHACAKNKCLQQGMALHNYILHKDPTIQNDLFLTNHLVNMYSKCGHLEYARYVFDQM 136
A+L C K Q LH+ L T +D F+ L +Y K + +A +FD+
Sbjct: 157 ATLLETCHCEKSTSQ---LHSLCLKLGLT--HDSFIVTKLNVLYGKHASIHHAHKLFDET 321
Query: 137 PRRNIVSWTALISGYAQCGLIRECFYLF 164
P +++ W AL+ Y G E LF
Sbjct: 322 PDKSVYLWNALLRRYRAEGEWAETLSLF 405
>BP063629
Length = 525
Score = 40.4 bits (93), Expect = 0.001
Identities = 37/138 (26%), Positives = 66/138 (47%), Gaps = 5/138 (3%)
Frame = +1
Query: 400 LKACAYFVTEQQALAVHSQVIKRGFQKDTVLSNALIHAYARS--GSLALSEQVFDEMCCH 457
LK+C +Q A+ + G Q+D N L+ S G + ++FD +
Sbjct: 112 LKSCKSMCELKQIQAL---IFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQP 282
Query: 458 DLVSWNSMLKSYALHGKAKDALELFKKL---DVHPDSTTFVALLSACSHAGLVEEGVEIF 514
L ++N M+K++A G + A+ LF++L V PD+ T+ +L A G V +G ++
Sbjct: 283 SLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKV- 459
Query: 515 NSMSDNHGIVPQLDHYAC 532
++ G+ + D Y C
Sbjct: 460 HAFVIKSGL--EFDAYVC 507
Score = 36.2 bits (82), Expect = 0.020
Identities = 21/60 (35%), Positives = 30/60 (50%)
Frame = +1
Query: 376 QAFLLFCQLHRENFVPDWHTFSIALKACAYFVTEQQALAVHSQVIKRGFQKDTVLSNALI 435
+A LF QL + PD +T+ LKA Q VH+ VIK G + D + N+L+
Sbjct: 340 RAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLM 519
>AV781023
Length = 555
Score = 40.0 bits (92), Expect = 0.001
Identities = 13/21 (61%), Positives = 16/21 (75%)
Frame = -1
Query: 746 VRDSNRFHHFKNATCSCNDYW 766
+RD RFHHF+ CSC+DYW
Sbjct: 555 LRDHTRFHHFRGGQCSCSDYW 493
>TC20002 similar to UP|Q9FJY7 (Q9FJY7) Selenium-binding protein-like,
partial (4%)
Length = 560
Score = 36.6 bits (83), Expect = 0.015
Identities = 24/99 (24%), Positives = 48/99 (48%), Gaps = 8/99 (8%)
Frame = -3
Query: 415 VHSQVIKRGFQKDTVLSNALIHAYARS---GSLALSEQVFDEMCCHDLVSWNSMLKSYAL 471
+H+++ + GF ++ ++ +I A S G + + VFD + D WN+M++ +
Sbjct: 297 IHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGFGN 118
Query: 472 HGKAKDALELFKKLD-----VHPDSTTFVALLSACSHAG 505
+ + A+ +K++ V PD+ TF LL G
Sbjct: 117 TNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLG 1
>BP039174
Length = 564
Score = 34.7 bits (78), Expect = 0.059
Identities = 27/122 (22%), Positives = 57/122 (46%), Gaps = 7/122 (5%)
Frame = -2
Query: 433 ALIHAYARSGSLALSEQVFDEMCCHDLVSWNS----MLKSYALHG---KAKDALELFKKL 485
AL+ AY+R G+ +++VFD + ++ + ++K+Y + G KA+ A E K+
Sbjct: 545 ALLRAYSRIGNAEGAQRVFDAIQLAGIIPDDKICGLVIKAYGMAGQSEKARIAFENMKRA 366
Query: 486 DVHPDSTTFVALLSACSHAGLVEEGVEIFNSMSDNHGIVPQLDHYACMVDLYGRVGKISE 545
+ P ++L A + +E + + GI+ + A + + ++G + E
Sbjct: 365 GIEPTDRCIGSVLVAYEKESKLNTALEFLIDL-EKEGIMVGEEASAILAGWFRKLGVVEE 189
Query: 546 AE 547
E
Sbjct: 188 VE 183
>TC15322 weakly similar to UP|Q9LG23 (Q9LG23) F14J16.14
(At1g55890/F14J16_4), partial (33%)
Length = 588
Score = 34.7 bits (78), Expect = 0.059
Identities = 16/40 (40%), Positives = 26/40 (65%), Gaps = 4/40 (10%)
Frame = +2
Query: 116 LVNMYSKCGHLEYARYVFDQMPRRN----IVSWTALISGY 151
L+ +Y K G + AR +FD+MP RN ++S+ AL++ Y
Sbjct: 359 LITLYGKSGMPKRARQMFDEMPERNCTRTVLSFNALLAAY 478
>AV408997
Length = 435
Score = 32.3 bits (72), Expect = 0.29
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +1
Query: 610 IEAGLIRKEMRDSRVKKQPGLSWVEVGKQVHEFTSGGHHHPHKEAIQSRL 659
I L+ K+ ++ + L W+ G Q+ F GGHH P++ A SRL
Sbjct: 22 IAESLLGKDPLEALIYSAIYLKWINTG-QITCFEDGGHHRPNRHAEISRL 168
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.323 0.136 0.415
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,790,836
Number of Sequences: 28460
Number of extensions: 216963
Number of successful extensions: 1063
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 1025
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1058
length of query: 766
length of database: 4,897,600
effective HSP length: 97
effective length of query: 669
effective length of database: 2,136,980
effective search space: 1429639620
effective search space used: 1429639620
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 59 (27.3 bits)
Lotus: description of TM0588c.4