BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0587.2
(389 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC7870 homologue to UP|CHS4_MEDSA (P30075) Chalcone synthase 4 ... 772 0.0
TC7867 homologue to UP|CHSY_PUELO (P23569) Chalcone synthase (N... 745 0.0
TC14313 similar to UP|O80407 (O80407) Chalcone synthase , parti... 656 0.0
TC7868 homologue to UP|CHS1_TRISU (P51083) Chalcone synthase 1 ... 284 2e-77
TC7873 homologue to UP|CHSY_PUELO (P23569) Chalcone synthase (N... 278 8e-76
TC7871 homologue to GB|AAA02825.1|166366|ALFCHS4A chalcone synth... 268 1e-72
TC7872 homologue to UP|CHSY_PUELO (P23569) Chalcone synthase (N... 264 2e-71
TC7869 homologue to GB|AAA02825.1|166366|ALFCHS4A chalcone synth... 224 2e-59
TC7874 similar to UP|CHS7_MEDSA (P51080) Chalcone synthase (Nar... 211 1e-55
TC20150 homologue to UP|CHSY_PUELO (P23569) Chalcone synthase (... 194 3e-50
TC7875 homologue to PIR|S44368|S44368 naringenin-chalcone syntha... 147 4e-36
BP077463 134 3e-32
BE122498 132 8e-32
BP068271 130 4e-31
TC10818 similar to UP|Q8LDM2 (Q8LDM2) Chalcone synthase-like pro... 123 5e-29
TC8647 similar to PIR|S32145|S32145 anther-specific protein - ra... 121 2e-28
AV426728 110 4e-25
TC9705 similar to UP|Q8LDM2 (Q8LDM2) Chalcone synthase-like prot... 110 5e-25
TC17013 similar to UP|O24625 (O24625) Anther-specific protein, p... 106 6e-24
TC8767 homologue to UP|Q8LAZ1 (Q8LAZ1) Very-long-chain fatty aci... 42 1e-04
>TC7870 homologue to UP|CHS4_MEDSA (P30075) Chalcone synthase 4
(Naringenin-chalcone synthase 4) (CHS12-1) , complete
Length = 1461
Score = 772 bits (1993), Expect = 0.0
Identities = 384/389 (98%), Positives = 388/389 (99%)
Frame = +1
Query: 1 MVSVAEIRKAQRAEGPATIFAIGTANPPNCVDQSTYPDFYFRVTNSEHKTELKEKFQRMC 60
MVSVAEIRKAQRAEGPATIFAIGTANP NCVDQSTYPDFYFRVTNSEHKTELKEKFQRMC
Sbjct: 118 MVSVAEIRKAQRAEGPATIFAIGTANPANCVDQSTYPDFYFRVTNSEHKTELKEKFQRMC 297
Query: 61 DKSMIKKRYMHLTEDLLKENPNMCAYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQP 120
DKSMIKKRYMHLTED+LKENPNMCAYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQP
Sbjct: 298 DKSMIKKRYMHLTEDILKENPNMCAYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQP 477
Query: 121 KSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAEN 180
KSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAEN
Sbjct: 478 KSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAEN 657
Query: 181 NKGARVLVVCSELTAVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDPVPEVEKPLFELV 240
NKGARVLVVCSELTAVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDP+PEVEKPLFELV
Sbjct: 658 NKGARVLVVCSELTAVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDPIPEVEKPLFELV 837
Query: 241 WTAQTIAPDSEGAIDGHLREVGLTFHLLKDVPGIVSKNIEKALIEAFQPLGISDYNSIFW 300
WTAQTIAPDSEGAIDGHLREVGLTFHLLKDVPGIVSKNIEKALIEAFQPLGISDYNSIFW
Sbjct: 838 WTAQTIAPDSEGAIDGHLREVGLTFHLLKDVPGIVSKNIEKALIEAFQPLGISDYNSIFW 1017
Query: 301 IAHPGGPAILDQVEQKLALKPEKMRATREVLSEYGNMSSACVLFILDEMRKKSAQNGLKT 360
IAHPGGPAILDQVEQKL+LKPEKMRATREVLSEYGNMSSACVLFILDEMRKKSAQ+GLKT
Sbjct: 1018IAHPGGPAILDQVEQKLSLKPEKMRATREVLSEYGNMSSACVLFILDEMRKKSAQDGLKT 1197
Query: 361 TGEGLEWGVLFGFGPGLTIETVVLRSVAI 389
TGEGLEWGVLFGFGPGLTIETVVLRSVAI
Sbjct: 1198TGEGLEWGVLFGFGPGLTIETVVLRSVAI 1284
>TC7867 homologue to UP|CHSY_PUELO (P23569) Chalcone synthase
(Naringenin-chalcone synthase) , complete
Length = 1387
Score = 745 bits (1923), Expect = 0.0
Identities = 365/389 (93%), Positives = 381/389 (97%)
Frame = +3
Query: 1 MVSVAEIRKAQRAEGPATIFAIGTANPPNCVDQSTYPDFYFRVTNSEHKTELKEKFQRMC 60
MVSVAEIRKAQRAEGPATI AIGTANPPNCVDQSTYPDFYF++TNSEH TELKEKFQRMC
Sbjct: 54 MVSVAEIRKAQRAEGPATILAIGTANPPNCVDQSTYPDFYFKITNSEHMTELKEKFQRMC 233
Query: 61 DKSMIKKRYMHLTEDLLKENPNMCAYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQP 120
DKSMIKKRYM+L E++LKENPN+CAYMAPSLDARQDMVVVEVPRLGKEAA KAIKEWGQP
Sbjct: 234 DKSMIKKRYMYLNEEILKENPNLCAYMAPSLDARQDMVVVEVPRLGKEAATKAIKEWGQP 413
Query: 121 KSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAEN 180
KSKITHLIFCTTSGVDMPGADYQLTKLLGLRP VKRYMMYQQGCFAGGTVLRLAKDLAEN
Sbjct: 414 KSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRYMMYQQGCFAGGTVLRLAKDLAEN 593
Query: 181 NKGARVLVVCSELTAVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDPVPEVEKPLFELV 240
NKGARVLVVCSE+TAVTFRGP+DTHLDSLVGQALFGDGAAA+IVGSDPVPE+EKPLFELV
Sbjct: 594 NKGARVLVVCSEITAVTFRGPNDTHLDSLVGQALFGDGAAAVIVGSDPVPEIEKPLFELV 773
Query: 241 WTAQTIAPDSEGAIDGHLREVGLTFHLLKDVPGIVSKNIEKALIEAFQPLGISDYNSIFW 300
WTAQTIAPDS+GAIDGHLREVGLTFHLLKDVPGIVSKNI+KAL+EAFQPL ISDYNSIFW
Sbjct: 774 WTAQTIAPDSDGAIDGHLREVGLTFHLLKDVPGIVSKNIDKALVEAFQPLNISDYNSIFW 953
Query: 301 IAHPGGPAILDQVEQKLALKPEKMRATREVLSEYGNMSSACVLFILDEMRKKSAQNGLKT 360
IAHPGGPAILDQVEQKL LKPEKM+ATR VLS+YGNMSSACVLFILDEMRKKSA+NGLKT
Sbjct: 954 IAHPGGPAILDQVEQKLGLKPEKMKATRNVLSDYGNMSSACVLFILDEMRKKSAENGLKT 1133
Query: 361 TGEGLEWGVLFGFGPGLTIETVVLRSVAI 389
TGEGLEWGVLFGFGPGLTIETVVLRSVAI
Sbjct: 1134TGEGLEWGVLFGFGPGLTIETVVLRSVAI 1220
>TC14313 similar to UP|O80407 (O80407) Chalcone synthase , partial (98%)
Length = 1567
Score = 656 bits (1692), Expect = 0.0
Identities = 317/389 (81%), Positives = 356/389 (91%)
Frame = +2
Query: 1 MVSVAEIRKAQRAEGPATIFAIGTANPPNCVDQSTYPDFYFRVTNSEHKTELKEKFQRMC 60
MV+V EIR AQR+ GPATI A GTA P +CV Q+ YPD+YFR+TNSEH T+LKEKF+RMC
Sbjct: 74 MVTVEEIRNAQRSSGPATILAFGTATPSHCVMQADYPDYYFRITNSEHMTDLKEKFKRMC 253
Query: 61 DKSMIKKRYMHLTEDLLKENPNMCAYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQP 120
+KSMI+KRYMHLTE++LKENP MCAYMAPSLDARQD+VVVEVP+LGKEAA KAIKEWGQP
Sbjct: 254 EKSMIRKRYMHLTEEILKENPAMCAYMAPSLDARQDLVVVEVPKLGKEAAAKAIKEWGQP 433
Query: 121 KSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAEN 180
KSKITHL+FCTTSGVDMPGADYQLTKLLGL+P VKR MMYQQGCFAGGTVLRLAKDLAEN
Sbjct: 434 KSKITHLVFCTTSGVDMPGADYQLTKLLGLKPSVKRLMMYQQGCFAGGTVLRLAKDLAEN 613
Query: 181 NKGARVLVVCSELTAVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDPVPEVEKPLFELV 240
NKGARVLVVCSE+TAVTFRGPSDTHLDSLVGQALFGDGAAA+IVG+DP VE+P+F+LV
Sbjct: 614 NKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAIIVGADPDLAVERPIFQLV 793
Query: 241 WTAQTIAPDSEGAIDGHLREVGLTFHLLKDVPGIVSKNIEKALIEAFQPLGISDYNSIFW 300
QTI PDS+GAIDGHLREVGLTFHLLKDVPGI+SK+IEK+L EAF P+GISD+NS+FW
Sbjct: 794 SAGQTILPDSDGAIDGHLREVGLTFHLLKDVPGIISKHIEKSLSEAFAPIGISDWNSLFW 973
Query: 301 IAHPGGPAILDQVEQKLALKPEKMRATREVLSEYGNMSSACVLFILDEMRKKSAQNGLKT 360
IAHPGGPAILDQVE KL LK EK+R+TR VL EYGNMSSACVLFILDE+R++S + G +T
Sbjct: 974 IAHPGGPAILDQVEAKLRLKEEKLRSTRHVLGEYGNMSSACVLFILDEVRRRSKEEGKET 1153
Query: 361 TGEGLEWGVLFGFGPGLTIETVVLRSVAI 389
TG+GLEWGVLFGFGPGLT+ETVVL SV +
Sbjct: 1154TGDGLEWGVLFGFGPGLTVETVVLHSVPL 1240
>TC7868 homologue to UP|CHS1_TRISU (P51083) Chalcone synthase 1
(Naringenin-chalcone synthase 1) , partial (38%)
Length = 599
Score = 284 bits (726), Expect = 2e-77
Identities = 140/148 (94%), Positives = 146/148 (98%)
Frame = +2
Query: 242 TAQTIAPDSEGAIDGHLREVGLTFHLLKDVPGIVSKNIEKALIEAFQPLGISDYNSIFWI 301
TAQTIAPDS+GAIDGHLREVGLTFHLLKDVPGIVSKNI+KAL+EAFQPL ISDYNSIFWI
Sbjct: 2 TAQTIAPDSDGAIDGHLREVGLTFHLLKDVPGIVSKNIDKALVEAFQPLNISDYNSIFWI 181
Query: 302 AHPGGPAILDQVEQKLALKPEKMRATREVLSEYGNMSSACVLFILDEMRKKSAQNGLKTT 361
AHPGGPAILDQVEQKL LKPEKM+ATREVLSEYGNMSSACVLFILDEMR+KSAQ+GLKTT
Sbjct: 182 AHPGGPAILDQVEQKLGLKPEKMKATREVLSEYGNMSSACVLFILDEMRRKSAQDGLKTT 361
Query: 362 GEGLEWGVLFGFGPGLTIETVVLRSVAI 389
GEGLEWGVLFGFGPGLTIETVVLRSVAI
Sbjct: 362 GEGLEWGVLFGFGPGLTIETVVLRSVAI 445
>TC7873 homologue to UP|CHSY_PUELO (P23569) Chalcone synthase
(Naringenin-chalcone synthase) , partial (35%)
Length = 534
Score = 278 bits (712), Expect = 8e-76
Identities = 136/137 (99%), Positives = 136/137 (99%)
Frame = +3
Query: 1 MVSVAEIRKAQRAEGPATIFAIGTANPPNCVDQSTYPDFYFRVTNSEHKTELKEKFQRMC 60
MVSVAEIRKAQRAEGPATIFAIGTANPPNCVDQSTYPDFYFRVTNSEHKTELKEKFQRMC
Sbjct: 123 MVSVAEIRKAQRAEGPATIFAIGTANPPNCVDQSTYPDFYFRVTNSEHKTELKEKFQRMC 302
Query: 61 DKSMIKKRYMHLTEDLLKENPNMCAYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQP 120
DKSMIKKRYMHLTEDLLKENPNMCAYMAPSLDARQDMVVVEVPRL KEAAVKAIKEWGQP
Sbjct: 303 DKSMIKKRYMHLTEDLLKENPNMCAYMAPSLDARQDMVVVEVPRLXKEAAVKAIKEWGQP 482
Query: 121 KSKITHLIFCTTSGVDM 137
KSKITHLIFCTTSGVDM
Sbjct: 483 KSKITHLIFCTTSGVDM 533
>TC7871 homologue to GB|AAA02825.1|166366|ALFCHS4A chalcone synthase
{Medicago sativa;} , partial (42%)
Length = 557
Score = 268 bits (684), Expect = 1e-72
Identities = 133/139 (95%), Positives = 136/139 (97%)
Frame = +1
Query: 251 EGAIDGHLREVGLTFHLLKDVPGIVSKNIEKALIEAFQPLGISDYNSIFWIAHPGGPAIL 310
EGAIDGHLREVGLTFHLLKDVPGIVSKNIEKALIEAFQPLGISDYNSIFWIAHPGGPAIL
Sbjct: 1 EGAIDGHLREVGLTFHLLKDVPGIVSKNIEKALIEAFQPLGISDYNSIFWIAHPGGPAIL 180
Query: 311 DQVEQKLALKPEKMRATREVLSEYGNMSSACVLFILDEMRKKSAQNGLKTTGEGLEWGVL 370
DQVEQKL LKPEKM ATR+VLS YGNMSSACVLFILDEMRKKSAQ+GLKTTGEGL+WGVL
Sbjct: 181 DQVEQKLGLKPEKMNATRDVLSNYGNMSSACVLFILDEMRKKSAQDGLKTTGEGLKWGVL 360
Query: 371 FGFGPGLTIETVVLRSVAI 389
FGFGPGLTIETVVLRSVAI
Sbjct: 361 FGFGPGLTIETVVLRSVAI 417
>TC7872 homologue to UP|CHSY_PUELO (P23569) Chalcone synthase
(Naringenin-chalcone synthase) , partial (33%)
Length = 476
Score = 264 bits (675), Expect = 2e-71
Identities = 129/129 (100%), Positives = 129/129 (100%)
Frame = +1
Query: 1 MVSVAEIRKAQRAEGPATIFAIGTANPPNCVDQSTYPDFYFRVTNSEHKTELKEKFQRMC 60
MVSVAEIRKAQRAEGPATIFAIGTANPPNCVDQSTYPDFYFRVTNSEHKTELKEKFQRMC
Sbjct: 88 MVSVAEIRKAQRAEGPATIFAIGTANPPNCVDQSTYPDFYFRVTNSEHKTELKEKFQRMC 267
Query: 61 DKSMIKKRYMHLTEDLLKENPNMCAYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQP 120
DKSMIKKRYMHLTEDLLKENPNMCAYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQP
Sbjct: 268 DKSMIKKRYMHLTEDLLKENPNMCAYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQP 447
Query: 121 KSKITHLIF 129
KSKITHLIF
Sbjct: 448 KSKITHLIF 474
>TC7869 homologue to GB|AAA02825.1|166366|ALFCHS4A chalcone synthase
{Medicago sativa;} , partial (34%)
Length = 514
Score = 224 bits (571), Expect = 2e-59
Identities = 112/114 (98%), Positives = 113/114 (98%)
Frame = +2
Query: 276 SKNIEKALIEAFQPLGISDYNSIFWIAHPGGPAILDQVEQKLALKPEKMRATREVLSEYG 335
SKNIEKALIEAFQPLGISDYNSIFWIAHPGGPAILDQVEQKLALKPEKMRATREVLSEYG
Sbjct: 2 SKNIEKALIEAFQPLGISDYNSIFWIAHPGGPAILDQVEQKLALKPEKMRATREVLSEYG 181
Query: 336 NMSSACVLFILDEMRKKSAQNGLKTTGEGLEWGVLFGFGPGLTIETVVLRSVAI 389
NMSSACVLFILDEMR+KSAQ GLKTTGEGLEWGVLFGFGPGLTIETVVLRSVAI
Sbjct: 182 NMSSACVLFILDEMRRKSAQGGLKTTGEGLEWGVLFGFGPGLTIETVVLRSVAI 343
>TC7874 similar to UP|CHS7_MEDSA (P51080) Chalcone synthase
(Naringenin-chalcone synthase) (Fragment) , partial
(44%)
Length = 488
Score = 211 bits (538), Expect = 1e-55
Identities = 105/116 (90%), Positives = 111/116 (95%)
Frame = +2
Query: 274 IVSKNIEKALIEAFQPLGISDYNSIFWIAHPGGPAILDQVEQKLALKPEKMRATREVLSE 333
IVSKNIEKALIEAF PLGISDY+SIFWIAHPGGPAILD VEQKL+LKPEKMRATREVLSE
Sbjct: 2 IVSKNIEKALIEAFPPLGISDYHSIFWIAHPGGPAILDPVEQKLSLKPEKMRATREVLSE 181
Query: 334 YGNMSSACVLFILDEMRKKSAQNGLKTTGEGLEWGVLFGFGPGLTIETVVLRSVAI 389
YGNMSSACVLFILDEMR+KSA +GL+T GEGLEWGVLFGFGPGLT+ETVVLRSV I
Sbjct: 182 YGNMSSACVLFILDEMRRKSAPDGLQTPGEGLEWGVLFGFGPGLTLETVVLRSVTI 349
>TC20150 homologue to UP|CHSY_PUELO (P23569) Chalcone synthase
(Naringenin-chalcone synthase) , partial (24%)
Length = 419
Score = 194 bits (492), Expect = 3e-50
Identities = 93/93 (100%), Positives = 93/93 (100%)
Frame = +3
Query: 1 MVSVAEIRKAQRAEGPATIFAIGTANPPNCVDQSTYPDFYFRVTNSEHKTELKEKFQRMC 60
MVSVAEIRKAQRAEGPATIFAIGTANPPNCVDQSTYPDFYFRVTNSEHKTELKEKFQRMC
Sbjct: 141 MVSVAEIRKAQRAEGPATIFAIGTANPPNCVDQSTYPDFYFRVTNSEHKTELKEKFQRMC 320
Query: 61 DKSMIKKRYMHLTEDLLKENPNMCAYMAPSLDA 93
DKSMIKKRYMHLTEDLLKENPNMCAYMAPSLDA
Sbjct: 321 DKSMIKKRYMHLTEDLLKENPNMCAYMAPSLDA 419
>TC7875 homologue to PIR|S44368|S44368 naringenin-chalcone synthase -
alfalfa {Medicago sativa;} , partial (21%)
Length = 388
Score = 147 bits (370), Expect = 4e-36
Identities = 74/77 (96%), Positives = 75/77 (97%)
Frame = +1
Query: 313 VEQKLALKPEKMRATREVLSEYGNMSSACVLFILDEMRKKSAQNGLKTTGEGLEWGVLFG 372
VEQKL LKPEKMRATREVLSEYGNMSSACVLFILDEMR+KSAQ GLKTTGEGLEWGVLFG
Sbjct: 1 VEQKLDLKPEKMRATREVLSEYGNMSSACVLFILDEMRRKSAQGGLKTTGEGLEWGVLFG 180
Query: 373 FGPGLTIETVVLRSVAI 389
FGPGLTIETVVLRSVAI
Sbjct: 181 FGPGLTIETVVLRSVAI 231
>BP077463
Length = 383
Score = 134 bits (337), Expect = 3e-32
Identities = 66/69 (95%), Positives = 68/69 (97%)
Frame = -1
Query: 321 PEKMRATREVLSEYGNMSSACVLFILDEMRKKSAQNGLKTTGEGLEWGVLFGFGPGLTIE 380
PEKMRATREVLSEYGNMSSACVLFILD+MRKKS Q+GLKTTGEGLEWGVLFGFGPGLTIE
Sbjct: 383 PEKMRATREVLSEYGNMSSACVLFILDQMRKKSVQDGLKTTGEGLEWGVLFGFGPGLTIE 204
Query: 381 TVVLRSVAI 389
TVVLRSVAI
Sbjct: 203 TVVLRSVAI 177
>BE122498
Length = 293
Score = 132 bits (333), Expect = 8e-32
Identities = 64/65 (98%), Positives = 64/65 (98%)
Frame = +1
Query: 1 MVSVAEIRKAQRAEGPATIFAIGTANPPNCVDQSTYPDFYFRVTNSEHKTELKEKFQRMC 60
MVSVAEIRKAQRAEGPATIFAIGTANPPNCVDQSTYPDFYFRVTNSEHKTELKEK QRMC
Sbjct: 97 MVSVAEIRKAQRAEGPATIFAIGTANPPNCVDQSTYPDFYFRVTNSEHKTELKEKCQRMC 276
Query: 61 DKSMI 65
DKSMI
Sbjct: 277 DKSMI 291
>BP068271
Length = 437
Score = 130 bits (327), Expect = 4e-31
Identities = 73/112 (65%), Positives = 80/112 (71%), Gaps = 2/112 (1%)
Frame = -1
Query: 280 EKALIEAFQPLGISDYNSIFWIAHPGGPAI-LDQVEQKLALKPEKMRATREVLSEYGNMS 338
EKAL EAF PLGISDYNSIFWIAHPGGPA + ++ MRATREVLSEYGNM
Sbjct: 437 EKALTEAFPPLGISDYNSIFWIAHPGGPATSWTSLSKRWPCHLNTMRATREVLSEYGNMY 258
Query: 339 SACVLFILDEMRKK-SAQNGLKTTGEGLEWGVLFGFGPGLTIETVVLRSVAI 389
SACVLF L K+ S+Q + LEWGVLFGFGPGLT+ TV LRSVAI
Sbjct: 257 SACVLFTLR*NEKEISSQVASPPLAKELEWGVLFGFGPGLTLATVPLRSVAI 102
>TC10818 similar to UP|Q8LDM2 (Q8LDM2) Chalcone synthase-like protein,
partial (44%)
Length = 589
Score = 123 bits (309), Expect = 5e-29
Identities = 68/174 (39%), Positives = 100/174 (57%)
Frame = +3
Query: 11 QRAEGPATIFAIGTANPPNCVDQSTYPDFYFRVTNSEHKTELKEKFQRMCDKSMIKKRYM 70
Q G ATI A+G A P V Q D YFR TN ++ ELK+K R+ + ++ RY+
Sbjct: 69 QANPGKATILALGKAFPHQLVMQEYLVDGYFRDTNCDNP-ELKQKLTRLSKTTTVRTRYV 245
Query: 71 HLTEDLLKENPNMCAYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIFC 130
++E++LK+ P + P++ R ++ V + EA+ IK WG+ S ITH+++
Sbjct: 246 VMSEEILKKYPELAVEGTPTVKQRLEICNKAVTEMAIEASQVCIKSWGRALSDITHVVYV 425
Query: 131 TTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGA 184
++S +PG D L K LGL P KR M+Y GC G LR+AKD+AENN G+
Sbjct: 426 SSSEARLPGGDLYLAKGLGLNPDTKRTMLYFAGCSGGVAGLRVAKDIAENNPGS 587
>TC8647 similar to PIR|S32145|S32145 anther-specific protein - rape
(fragment) {Brassica napus;} , partial (76%)
Length = 759
Score = 121 bits (304), Expect = 2e-28
Identities = 59/153 (38%), Positives = 90/153 (58%)
Frame = +2
Query: 235 PLFELVWTAQTIAPDSEGAIDGHLREVGLTFHLLKDVPGIVSKNIEKALIEAFQPLGISD 294
P EL + Q P ++ IDG L E G+ F L +D+P + NIE + + D
Sbjct: 8 PFLELNYAIQKFLPGTQEVIDGRLSEEGINFKLGRDLPQKIEDNIEGFCRKLMAKSNVED 187
Query: 295 YNSIFWIAHPGGPAILDQVEQKLALKPEKMRATREVLSEYGNMSSACVLFILDEMRKKSA 354
+N +FW HPGGPAIL+++E KL L EK+ +R+ L YGN+SS + ++++ MR+
Sbjct: 188 FNDLFWAVHPGGPAILNRLETKLKLSEEKLECSRKALINYGNVSSNTIFYVMEYMREFLK 367
Query: 355 QNGLKTTGEGLEWGVLFGFGPGLTIETVVLRSV 387
++G G EWG+ FGPG+T E ++LRS+
Sbjct: 368 EDG------GEEWGLGLAFGPGITFEGILLRSL 448
>AV426728
Length = 230
Score = 110 bits (275), Expect = 4e-25
Identities = 53/55 (96%), Positives = 54/55 (97%)
Frame = +1
Query: 1 MVSVAEIRKAQRAEGPATIFAIGTANPPNCVDQSTYPDFYFRVTNSEHKTELKEK 55
MVSVAEIRKAQRAEGPATIFAIGTANP NCVDQSTYPDFYFRVTNS+HKTELKEK
Sbjct: 64 MVSVAEIRKAQRAEGPATIFAIGTANPSNCVDQSTYPDFYFRVTNSKHKTELKEK 228
>TC9705 similar to UP|Q8LDM2 (Q8LDM2) Chalcone synthase-like protein,
partial (35%)
Length = 634
Score = 110 bits (274), Expect = 5e-25
Identities = 53/140 (37%), Positives = 89/140 (62%), Gaps = 2/140 (1%)
Frame = +2
Query: 250 SEGAIDGHLREVGLTFHLLKDVPGIVSKNIEKALIEAFQPLGIS--DYNSIFWIAHPGGP 307
+E IDG L E G++F L +++P I+ +E + +G +YN++FW HPGGP
Sbjct: 2 TEKKIDGRLTEEGISFKLARELPQIIEDTVEGFCEKLMGVVGFQNKEYNNLFWAVHPGGP 181
Query: 308 AILDQVEQKLALKPEKMRATREVLSEYGNMSSACVLFILDEMRKKSAQNGLKTTGEGLEW 367
AIL+++E+KL L PEK+ A+R L ++GN SS ++++L+ M ++ + K E EW
Sbjct: 182 AILNRIEKKLDLLPEKLNASRRALMDFGNASSNTIVYVLEYMMEEGLKI-RKGGEEDPEW 358
Query: 368 GVLFGFGPGLTIETVVLRSV 387
G++ FGPG+T E ++ R++
Sbjct: 359 GLILAFGPGITFEGILARNL 418
>TC17013 similar to UP|O24625 (O24625) Anther-specific protein, partial
(42%)
Length = 617
Score = 106 bits (265), Expect = 6e-24
Identities = 60/179 (33%), Positives = 98/179 (54%), Gaps = 3/179 (1%)
Frame = +2
Query: 3 SVAEIRKAQRAEGP--ATIFAIGTANPPNCVDQSTYPDFYFRVTNSEHKTELKEKFQRMC 60
S+ +A+RA P ATI AIG A P + Q + Y R T E + +KEK +R+C
Sbjct: 83 SMQRAARAKRAPTPGKATILAIGKAFPAQVIPQECLVEGYIRDTKCED-SYVKEKLERLC 259
Query: 61 DKSMIKKRYMHLTEDLLKENPNMCAYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQP 120
+ +K RY +++++L P + P++ + ++ V + +A++ I EWG+
Sbjct: 260 KNTTVKTRYTVMSKEILDNYPELATEGTPTIRQKLEIANPAVVEMAAKASLACINEWGRS 439
Query: 121 KSKITHLIFCTTSGVDMPGAD-YQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLA 178
ITH+++ ++S + +PG D Y GLR V R M+Y GC+ G T LR+AKD+A
Sbjct: 440 TDLITHIVYVSSSEIRLPGGDLYLANXAXGLRSDVSRVMLYFLGCYGGVTGLRVAKDIA 616
>TC8767 homologue to UP|Q8LAZ1 (Q8LAZ1) Very-long-chain fatty acid
condensing enzyme CUT1, partial (23%)
Length = 770
Score = 42.4 bits (98), Expect = 1e-04
Identities = 23/72 (31%), Positives = 40/72 (54%)
Frame = +1
Query: 303 HPGGPAILDQVEQKLALKPEKMRATREVLSEYGNMSSACVLFILDEMRKKSAQNGLKTTG 362
H GG A++D++++ L L E + A+R L +GN SS+ + + L+ + K G G
Sbjct: 28 HAGGRAVIDELQRNLQLSAEHVEASRMTLHRFGNTSSSSLWYELNYIESK----GRMKRG 195
Query: 363 EGLEWGVLFGFG 374
+ + W + FG G
Sbjct: 196 DRV-WQIAFGSG 228
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.319 0.136 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,937,592
Number of Sequences: 28460
Number of extensions: 71391
Number of successful extensions: 332
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 325
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 325
length of query: 389
length of database: 4,897,600
effective HSP length: 92
effective length of query: 297
effective length of database: 2,279,280
effective search space: 676946160
effective search space used: 676946160
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)
Lotus: description of TM0587.2