BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0544.6
(285 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BP036655 67 3e-12
TC13318 similar to UP|CAA20314 (CAA20314) SPBC30B4.01c protein (... 55 1e-08
TC9200 similar to UP|Q8LLE6 (Q8LLE6) RNA-binding protein AKIP1, ... 54 2e-08
TC11270 similar to UP|Q9LM88 (Q9LM88) F2D10.15, partial (9%) 53 7e-08
BP034655 53 7e-08
TC8606 similar to UP|AAQ82688 (AAQ82688) Epa4p, partial (7%) 51 2e-07
AW720070 49 1e-06
TC11276 weakly similar to UP|HDA1_CHICK (P56517) Histone deacety... 44 3e-05
BP085186 44 4e-05
AV780096 42 1e-04
TC9068 similar to UP|SCWA_YEAST (Q04951) Probable family 17 gluc... 42 1e-04
BP031636 42 2e-04
TC17157 similar to UP|CAD27462 (CAD27462) Nucleosome assembly pr... 41 2e-04
AV408295 41 2e-04
BF177554 40 3e-04
BI420041 40 3e-04
BP038960 40 5e-04
TC9175 weakly similar to UP|INAD_DROME (Q24008) Inactivation-no-... 40 5e-04
AV411437 39 8e-04
TC14994 similar to UP|O82469 (O82469) Protein phosphatase-2C , p... 39 0.001
>BP036655
Length = 556
Score = 67.4 bits (163), Expect = 3e-12
Identities = 55/133 (41%), Positives = 66/133 (49%), Gaps = 12/133 (9%)
Frame = -3
Query: 140 LRPVRKDGRLELTEVRIHRAE-ILHASRHDGRLTLHLI---------PDQVSLEEEEEEI 189
+RP R+ GRL L V HA R DGRL LHL D ++EEEE +
Sbjct: 524 VRPHREGGRLILEAVASPSPRPCFHAERGDGRLRLHLFEEEGLSDDGDDDEVVDEEEEVV 345
Query: 190 EEEDDQDEIEEDQEQEEEELVEEEEELEEEVALDDDEKEEEEEEIECEREERVAEWGFHE 249
EE D D+I +D+ +E VEEE E E E EKEEEEEE EC E E G +
Sbjct: 344 EEWSDDDDINDDESDDE---VEEESETEIET-----EKEEEEEE-ECGVENVEDEMGVKK 192
Query: 250 GYR--RCHEMVNQ 260
R RC E N+
Sbjct: 191 FNRPSRCKESGNR 153
Score = 27.7 bits (60), Expect = 2.3
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +2
Query: 255 HEMVNQHHHHHHNVHGNHHHNHI 277
H ++ HHH HH H HHH+ I
Sbjct: 278 HFLLPLHHHFHH--H*YHHHHSI 340
>TC13318 similar to UP|CAA20314 (CAA20314) SPBC30B4.01c protein (SPBC3D6.14C
protein) (Fragment), partial (15%)
Length = 543
Score = 55.1 bits (131), Expect = 1e-08
Identities = 27/64 (42%), Positives = 43/64 (67%)
Frame = +3
Query: 177 PDQVSLEEEEEEIEEEDDQDEIEEDQEQEEEELVEEEEELEEEVALDDDEKEEEEEEIEC 236
P Q EEEE++ EEEDD+DE ++D + ++++ EEE++ DDDE+EE EE+E
Sbjct: 234 PVQTDNEEEEDDDEEEDDEDEDDDDDDDDDDDGEEEEDDD------DDDEEEEGSEEVEV 395
Query: 237 EREE 240
E ++
Sbjct: 396 EGKD 407
Score = 36.2 bits (82), Expect = 0.007
Identities = 20/64 (31%), Positives = 37/64 (57%)
Frame = +3
Query: 186 EEEIEEEDDQDEIEEDQEQEEEELVEEEEELEEEVALDDDEKEEEEEEIECEREERVAEW 245
+ EI + ++ D E+EE++ +EEE+ E+E DDD+ +++ EE E + ++ E
Sbjct: 201 DPEIYPDGPPKPVQTDNEEEEDD--DEEEDDEDEDDDDDDDDDDDGEEEEDDDDDDEEEE 374
Query: 246 GFHE 249
G E
Sbjct: 375 GSEE 386
Score = 33.5 bits (75), Expect = 0.042
Identities = 11/28 (39%), Positives = 18/28 (64%), Gaps = 5/28 (17%)
Frame = -1
Query: 257 MVNQHHHHH-----HNVHGNHHHNHIRM 279
++ HHHHH H+ H +HHH+H+ +
Sbjct: 372 LLPHHHHHHLLLPPHHHHHHHHHHHLHL 289
Score = 31.2 bits (69), Expect = 0.21
Identities = 11/23 (47%), Positives = 15/23 (64%)
Frame = -1
Query: 255 HEMVNQHHHHHHNVHGNHHHNHI 277
H ++ HHHHH+ H HHH H+
Sbjct: 351 HHLLLPPHHHHHHHH--HHHLHL 289
Score = 29.6 bits (65), Expect = 0.61
Identities = 9/16 (56%), Positives = 12/16 (74%)
Frame = -1
Query: 259 NQHHHHHHNVHGNHHH 274
+ HHHHHH+ H + HH
Sbjct: 330 HHHHHHHHHHHLHLHH 283
Score = 27.7 bits (60), Expect = 2.3
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -1
Query: 255 HEMVNQHHHHHHNVHGNHHHNHI 277
H + HHHHH ++H H+H+
Sbjct: 330 HHHHHHHHHHHLHLHHLPLHHHL 262
>TC9200 similar to UP|Q8LLE6 (Q8LLE6) RNA-binding protein AKIP1, partial
(31%)
Length = 727
Score = 54.3 bits (129), Expect = 2e-08
Identities = 34/62 (54%), Positives = 43/62 (68%)
Frame = +1
Query: 179 QVSLEEEEEEIEEEDDQDEIEEDQEQEEEELVEEEEELEEEVALDDDEKEEEEEEIECER 238
Q LE E +E EE ++ E+EE+ E+EEEE EEEEE EEE +E+EEEEEE+E E
Sbjct: 166 QNKLEAEVQEYEEVEE--EVEEEVEEEEEE-EEEEEEGEEE-----EEEEEEEEEVEAEA 321
Query: 239 EE 240
EE
Sbjct: 322 EE 327
Score = 52.4 bits (124), Expect = 9e-08
Identities = 26/44 (59%), Positives = 35/44 (79%)
Frame = +1
Query: 183 EEEEEEIEEEDDQDEIEEDQEQEEEELVEEEEELEEEVALDDDE 226
EE EEE+EEE++++E EE+ E+EEEE EEEEE+E E +DDE
Sbjct: 211 EEVEEEVEEEEEEEEEEEEGEEEEEE-EEEEEEVEAEAEEEDDE 339
Score = 52.4 bits (124), Expect = 9e-08
Identities = 27/53 (50%), Positives = 40/53 (74%)
Frame = +1
Query: 183 EEEEEEIEEEDDQDEIEEDQEQEEEELVEEEEELEEEVALDDDEKEEEEEEIE 235
EE EEE+EEE ++ EE++E+EEEE EEEEE EEE ++ + +EE++E I+
Sbjct: 199 EEVEEEVEEEVEE---EEEEEEEEEEGEEEEEEEEEEEEVEAEAEEEDDEPIQ 348
Score = 51.6 bits (122), Expect = 2e-07
Identities = 26/50 (52%), Positives = 37/50 (74%)
Frame = +1
Query: 184 EEEEEIEEEDDQDEIEEDQEQEEEELVEEEEELEEEVALDDDEKEEEEEE 233
+E EE+EEE +++ EE++E+EEEE EEEEE EEE + E EEE++E
Sbjct: 190 QEYEEVEEEVEEEVEEEEEEEEEEEEGEEEEEEEEEEEEVEAEAEEEDDE 339
Score = 45.4 bits (106), Expect = 1e-05
Identities = 21/44 (47%), Positives = 33/44 (74%)
Frame = +1
Query: 176 IPDQVSLEEEEEEIEEEDDQDEIEEDQEQEEEELVEEEEELEEE 219
+ ++V E EEEE EEE++++ EE++E+EEEE VE E E E++
Sbjct: 205 VEEEVEEEVEEEEEEEEEEEEGEEEEEEEEEEEEVEAEAEEEDD 336
Score = 45.1 bits (105), Expect = 1e-05
Identities = 27/53 (50%), Positives = 34/53 (63%)
Frame = +1
Query: 192 EDDQDEIEEDQEQEEEELVEEEEELEEEVALDDDEKEEEEEEIECEREERVAE 244
E + E EE +E+ EEE+ EEEEE EEE ++ E+EEEEEE E E E E
Sbjct: 178 EAEVQEYEEVEEEVEEEVEEEEEEEEEE---EEGEEEEEEEEEEEEVEAEAEE 327
Score = 44.7 bits (104), Expect = 2e-05
Identities = 22/54 (40%), Positives = 36/54 (65%)
Frame = +1
Query: 176 IPDQVSLEEEEEEIEEEDDQDEIEEDQEQEEEELVEEEEELEEEVALDDDEKEE 229
+ ++V EEEEEE EEE +++E EE++E+E E EEE++ + L+ KE+
Sbjct: 217 VEEEVEEEEEEEEEEEEGEEEEEEEEEEEEVEAEAEEEDDEPIQKLLEPMGKEQ 378
Score = 42.4 bits (98), Expect = 9e-05
Identities = 22/48 (45%), Positives = 33/48 (67%)
Frame = +1
Query: 195 QDEIEEDQEQEEEELVEEEEELEEEVALDDDEKEEEEEEIECEREERV 242
Q+++E + ++ EE E EEE+EEE +++E+E EEEE E E EE V
Sbjct: 166 QNKLEAEVQEYEEVEEEVEEEVEEEEEEEEEEEEGEEEEEEEEEEEEV 309
Score = 42.0 bits (97), Expect = 1e-04
Identities = 22/48 (45%), Positives = 31/48 (63%)
Frame = +1
Query: 197 EIEEDQEQEEEELVEEEEELEEEVALDDDEKEEEEEEIECEREERVAE 244
+++ E E +E E EEE+EEEV +++E+EEEEE E E EE E
Sbjct: 160 KLQNKLEAEVQEYEEVEEEVEEEVEEEEEEEEEEEEGEEEEEEEEEEE 303
Score = 38.1 bits (87), Expect = 0.002
Identities = 22/64 (34%), Positives = 36/64 (55%)
Frame = +1
Query: 181 SLEEEEEEIEEEDDQDEIEEDQEQEEEELVEEEEELEEEVALDDDEKEEEEEEIECEREE 240
S+ ++ + + + E+ + + E V+E EE+EEEV + +E+EEEEEE E EE
Sbjct: 100 SITKKRKLVPKSSQSAELPFKLQNKLEAEVQEYEEVEEEVEEEVEEEEEEEEEEEEGEEE 279
Query: 241 RVAE 244
E
Sbjct: 280 EEEE 291
>TC11270 similar to UP|Q9LM88 (Q9LM88) F2D10.15, partial (9%)
Length = 735
Score = 52.8 bits (125), Expect = 7e-08
Identities = 30/71 (42%), Positives = 44/71 (61%), Gaps = 8/71 (11%)
Frame = +3
Query: 182 LEEEEEEIEEEDDQ--------DEIEEDQEQEEEELVEEEEELEEEVALDDDEKEEEEEE 233
+EEEEE+ E+E++Q +E QE++EEE EEEE EEEV ++D++ E+E+E
Sbjct: 336 VEEEEEDEEDEEEQTPHPTRGRSRVEHAQEEDEEEENGEEEEEEEEVVVEDEQGNEDEDE 515
Query: 234 IECEREERVAE 244
E E V E
Sbjct: 516 DEEEEGVVVVE 548
Score = 34.3 bits (77), Expect = 0.025
Identities = 17/52 (32%), Positives = 30/52 (57%)
Frame = +3
Query: 182 LEEEEEEIEEEDDQDEIEEDQEQEEEELVEEEEELEEEVALDDDEKEEEEEE 233
+E+ + +EEE++ +E EE+Q E +EE +++ +EEEEEE
Sbjct: 315 VEKLNQGVEEEEEDEEDEEEQTPHPTRGRSRVEHAQEEDEEEENGEEEEEEE 470
Score = 32.7 bits (73), Expect = 0.072
Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Frame = +3
Query: 169 GRLTLHLIPDQVSLEEEEEEIEEEDDQDEIEEDQEQEEEELVEEEEELEEEVALDDDEKE 228
GR + ++ EE EE E+EEEE+V E+E+ E D+DE E
Sbjct: 396 GRSRVEHAQEEDEEEENGEE--------------EEEEEEVVVEDEQGNE----DEDEDE 521
Query: 229 EEEEEIECE-REERVAEWGFHEG 250
EEE + E + +V G H G
Sbjct: 522 EEEGVVVVEVKGRKVDSKGLHSG 590
Score = 30.8 bits (68), Expect = 0.28
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Frame = +3
Query: 163 HASRHDGRLTLHLIPDQVSLEEEEEEIEE----EDDQDEIEEDQEQEEEELVEEE 213
H +R R+ D+ EEEE EE ED+Q +ED+++EEE +V E
Sbjct: 384 HPTRGRSRVEHAQEEDEEEENGEEEEEEEEVVVEDEQGNEDEDEDEEEEGVVVVE 548
>BP034655
Length = 517
Score = 52.8 bits (125), Expect = 7e-08
Identities = 33/87 (37%), Positives = 50/87 (56%)
Frame = +1
Query: 157 HRAEILHASRHDGRLTLHLIPDQVSLEEEEEEIEEEDDQDEIEEDQEQEEEELVEEEEEL 216
HR EI A HL L +++EE EEE++++E EE++E+EEEE EEE+E
Sbjct: 82 HRNEIAAA---------HLTAADFGLSDDDEEEEEEEEEEEEEEEEEEEEEE--EEEDE- 225
Query: 217 EEEVALDDDEKEEEEEEIECEREERVA 243
+DDE++E+E+ I RV+
Sbjct: 226 ------EDDEEDEDEDYIPVAPSHRVS 288
Score = 38.9 bits (89), Expect = 0.001
Identities = 23/47 (48%), Positives = 28/47 (58%)
Frame = +1
Query: 198 IEEDQEQEEEELVEEEEELEEEVALDDDEKEEEEEEIECEREERVAE 244
+ +D E+EEEE EEEEE EEE EEEEEE E E ++ E
Sbjct: 130 LSDDDEEEEEEEEEEEEEEEEE--------EEEEEEEEDEEDDEEDE 246
Score = 29.6 bits (65), Expect = 0.61
Identities = 14/26 (53%), Positives = 17/26 (64%)
Frame = +1
Query: 219 EVALDDDEKEEEEEEIECEREERVAE 244
+ L DD++EEEEEE E E EE E
Sbjct: 121 DFGLSDDDEEEEEEEEEEEEEEEEEE 198
>TC8606 similar to UP|AAQ82688 (AAQ82688) Epa4p, partial (7%)
Length = 1008
Score = 51.2 bits (121), Expect = 2e-07
Identities = 22/57 (38%), Positives = 42/57 (73%)
Frame = -2
Query: 177 PDQVSLEEEEEEIEEEDDQDEIEEDQEQEEEELVEEEEELEEEVALDDDEKEEEEEE 233
P++ +EE+E+ E+++D D+ +ED ++E++ +EEEE EE +D+E++EE+EE
Sbjct: 446 PEENGEDEEDEDGEDQEDDDDDDEDDDEEDDGGEDEEEEGVEEEDNEDEEEDEEDEE 276
Score = 50.8 bits (120), Expect = 3e-07
Identities = 23/59 (38%), Positives = 41/59 (68%)
Frame = -2
Query: 183 EEEEEEIEEEDDQDEIEEDQEQEEEELVEEEEELEEEVALDDDEKEEEEEEIECEREER 241
EE+E+ ++EDD D+ E+D E+++ EEEE +EEE D++E EE+EE ++ ++ +
Sbjct: 425 EEDEDGEDQEDDDDDDEDDDEEDDGGEDEEEEGVEEEDNEDEEEDEEDEEALQPPKKRK 249
Score = 45.1 bits (105), Expect = 1e-05
Identities = 19/55 (34%), Positives = 38/55 (68%)
Frame = -2
Query: 183 EEEEEEIEEEDDQDEIEEDQEQEEEELVEEEEELEEEVALDDDEKEEEEEEIECE 237
EE E+ E+ED +D+ ++D + E+++ ++ E EEE +++++ E+EEE+ E E
Sbjct: 443 EENGEDEEDEDGEDQEDDDDDDEDDDEEDDGGEDEEEEGVEEEDNEDEEEDEEDE 279
Score = 43.9 bits (102), Expect = 3e-05
Identities = 21/53 (39%), Positives = 36/53 (67%)
Frame = -2
Query: 178 DQVSLEEEEEEIEEEDDQDEIEEDQEQEEEELVEEEEELEEEVALDDDEKEEE 230
DQ ++++E+ +EEDD E EE++ EEE+ +EEE+ E+E AL +K ++
Sbjct: 404 DQEDDDDDDEDDDEEDDGGEDEEEEGVEEEDNEDEEEDEEDEEALQPPKKRKK 246
Score = 39.7 bits (91), Expect = 6e-04
Identities = 19/50 (38%), Positives = 34/50 (68%)
Frame = -2
Query: 191 EEDDQDEIEEDQEQEEEELVEEEEELEEEVALDDDEKEEEEEEIECEREE 240
EE+ +DE +ED E +E++ ++E++ EE+ +D+E+E EEE + EE
Sbjct: 443 EENGEDEEDEDGEDQEDDDDDDEDDDEEDDGGEDEEEEGVEEEDNEDEEE 294
Score = 28.9 bits (63), Expect = 1.0
Identities = 13/34 (38%), Positives = 17/34 (49%), Gaps = 10/34 (29%)
Frame = +2
Query: 254 CH-----EMVNQHH-----HHHHNVHGNHHHNHI 277
CH +M N H HHHH++H H H H+
Sbjct: 512 CHIQLHLQMTNPLHPLRMGHHHHHLHRPHRHCHL 613
>AW720070
Length = 484
Score = 48.9 bits (115), Expect = 1e-06
Identities = 30/87 (34%), Positives = 41/87 (46%), Gaps = 4/87 (4%)
Frame = +1
Query: 187 EEIEEEDDQDEIEEDQEQEEEELVEEEEELEEEVALDDDEKEEEEEEIECERE----ERV 242
E I+EE + + +E+EEEE EEEEE EE + +EEEEEE +
Sbjct: 64 ELIQEEAVKGYSDSREEEEEEEEEEEEEEAGEEGIITTTREEEEEEEESSSKHHCPFSSP 243
Query: 243 AEWGFHEGYRRCHEMVNQHHHHHHNVH 269
+ + + N HH HHHN H
Sbjct: 244 SNFSLSSSSPSITDYNNTHHLHHHNHH 324
>TC11276 weakly similar to UP|HDA1_CHICK (P56517) Histone deacetylase 1
(HD1), partial (5%)
Length = 636
Score = 43.9 bits (102), Expect = 3e-05
Identities = 25/87 (28%), Positives = 53/87 (60%)
Frame = +3
Query: 177 PDQVSLEEEEEEIEEEDDQDEIEEDQEQEEEELVEEEEELEEEVALDDDEKEEEEEEIEC 236
P++ ++EE +EE+ +DE + ++ Q+EE EE ++ EE+ D++KEEE+++ +
Sbjct: 27 PEKKEEPKKEEPQKEEEKKDEPKSEEPQKEEAKKEEPKKEEEK---KDEKKEEEKKKEQP 197
Query: 237 EREERVAEWGFHEGYRRCHEMVNQHHH 263
+ + V EW + YR+ + + ++H
Sbjct: 198 AQIDPVLEW--VKAYRQYNPHMTTYYH 272
>BP085186
Length = 388
Score = 43.5 bits (101), Expect = 4e-05
Identities = 25/54 (46%), Positives = 32/54 (58%)
Frame = -1
Query: 177 PDQVSLEEEEEEIEEEDDQDEIEEDQEQEEEELVEEEEELEEEVALDDDEKEEE 230
PD E EEE EEE++ EE++E+EEEE E EEE EE ++ E E E
Sbjct: 286 PDNADGEGNEEEEEEEEE----EEEEEEEEEEEAEPEEEKNEEENVNTQEGEGE 137
Score = 41.2 bits (95), Expect = 2e-04
Identities = 21/39 (53%), Positives = 27/39 (68%)
Frame = -1
Query: 193 DDQDEIEEDQEQEEEELVEEEEELEEEVALDDDEKEEEE 231
D+ D ++E+EEEE EEEEE EEE A ++EK EEE
Sbjct: 283 DNADGEGNEEEEEEEEEEEEEEEEEEEEAEPEEEKNEEE 167
Score = 41.2 bits (95), Expect = 2e-04
Identities = 20/47 (42%), Positives = 30/47 (63%)
Frame = -1
Query: 194 DQDEIEEDQEQEEEELVEEEEELEEEVALDDDEKEEEEEEIECEREE 240
D + E ++E+EEEE EEEEE EEE + +E++ EEE + + E
Sbjct: 283 DNADGEGNEEEEEEEEEEEEEEEEEEEEAEPEEEKNEEENVNTQEGE 143
Score = 35.0 bits (79), Expect = 0.015
Identities = 19/34 (55%), Positives = 24/34 (69%)
Frame = -1
Query: 211 EEEEELEEEVALDDDEKEEEEEEIECEREERVAE 244
EEEEE EEE +++E+EEEEEE E E E+ E
Sbjct: 259 EEEEEEEEE---EEEEEEEEEEEAEPEEEKNEEE 167
Score = 35.0 bits (79), Expect = 0.015
Identities = 22/47 (46%), Positives = 26/47 (54%)
Frame = -1
Query: 196 DEIEEDQEQEEEELVEEEEELEEEVALDDDEKEEEEEEIECEREERV 242
D + + +EEEE EEEEE EEE E+EE E E E EE V
Sbjct: 283 DNADGEGNEEEEEEEEEEEEEEEE------EEEEAEPEEEKNEEENV 161
Score = 29.6 bits (65), Expect = 0.61
Identities = 20/60 (33%), Positives = 29/60 (48%)
Frame = -1
Query: 155 RIHRAEILHASRHDGRLTLHLIPDQVSLEEEEEEIEEEDDQDEIEEDQEQEEEELVEEEE 214
RI +++ DG ++ EEEEEE EE E E ++E+ EEE V +E
Sbjct: 313 RIVNGKLISPDNADGEGNEEEEEEEEEEEEEEEEEEE-----EAEPEEEKNEEENVNTQE 149
Score = 26.9 bits (58), Expect = 4.0
Identities = 17/45 (37%), Positives = 21/45 (45%)
Frame = -1
Query: 223 DDDEKEEEEEEIECEREERVAEWGFHEGYRRCHEMVNQHHHHHHN 267
+ +E+EEEEEE E E EE E E + E VN N
Sbjct: 268 EGNEEEEEEEEEEEEEEEEEEEEAEPEEEKNEEENVNTQEGEGEN 134
>AV780096
Length = 564
Score = 42.0 bits (97), Expect = 1e-04
Identities = 25/66 (37%), Positives = 37/66 (55%), Gaps = 7/66 (10%)
Frame = +1
Query: 183 EEEEEEIEEEDDQDEIEEDQEQEE-------EELVEEEEELEEEVALDDDEKEEEEEEIE 235
EEEEEE +EE+ D+IEED E+ E + +E E+ VA DDD +++E +
Sbjct: 55 EEEEEEQQEEEVHDQIEEDDEELEAVARSASSDDEPDESGGEDAVAADDDNQDDEGNAAD 234
Query: 236 CEREER 241
E +R
Sbjct: 235 PEISKR 252
Score = 30.4 bits (67), Expect = 0.36
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
Frame = +1
Query: 186 EEEIEEEDDQDEIEEDQEQEEEELVEEEEELEEEVALDDDEKE-------EEEEEIECER 238
E ++ D D E+EEEE ++EEE+ +++ DD+E E ++E E
Sbjct: 4 ERNLDLRDMARRNGSDSEEEEEE--QQEEEVHDQIEEDDEELEAVARSASSDDEPDESGG 177
Query: 239 EERVA 243
E+ VA
Sbjct: 178 EDAVA 192
>TC9068 similar to UP|SCWA_YEAST (Q04951) Probable family 17 glucosidase
SCW10 precursor (Soluble cell wall protein 10) ,
partial (6%)
Length = 1209
Score = 42.0 bits (97), Expect = 1e-04
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = -2
Query: 252 RRCHEMVNQHHHHHHNVHGNHHHNH 276
RR H + HHHHHH+ H +HHH+H
Sbjct: 158 RRRHHHHHHHHHHHHHHHHHHHHHH 84
Score = 40.0 bits (92), Expect = 5e-04
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -2
Query: 254 CHEMVNQHHHHHHNVHGNHHHNH 276
C + HHHHHH+ H +HHH+H
Sbjct: 161 CRRRHHHHHHHHHHHHHHHHHHH 93
Score = 39.7 bits (91), Expect = 6e-04
Identities = 15/27 (55%), Positives = 19/27 (69%)
Frame = -2
Query: 252 RRCHEMVNQHHHHHHNVHGNHHHNHIR 278
RR H + HHHHHH+ H +HHH+H R
Sbjct: 155 RRHHH--HHHHHHHHHHHHHHHHHHHR 81
Score = 31.6 bits (70), Expect = 0.16
Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 3/27 (11%)
Frame = -2
Query: 253 RCHEMV---NQHHHHHHNVHGNHHHNH 276
+C +V + HHHHH H +HHH+H
Sbjct: 185 QCRSLVVSCRRRHHHHH--HHHHHHHH 111
Score = 29.6 bits (65), Expect = 0.61
Identities = 11/27 (40%), Positives = 13/27 (47%)
Frame = -2
Query: 248 HEGYRRCHEMVNQHHHHHHNVHGNHHH 274
H + H + HHHHHH HHH
Sbjct: 149 HHHHHHHHHHHHHHHHHHH-----HHH 84
>BP031636
Length = 492
Score = 41.6 bits (96), Expect = 2e-04
Identities = 23/55 (41%), Positives = 32/55 (57%)
Frame = -2
Query: 160 EILHASRHDGRLTLHLIPDQVSLEEEEEEIEEEDDQDEIEEDQEQEEEELVEEEE 214
E LHASR DGRL LH + + +++E EEDD D +E EEE + +E +
Sbjct: 485 EFLHASREDGRLKLHFV------QPDDDEFLEEDDGD-LESTINDEEESIGKEND 342
>TC17157 similar to UP|CAD27462 (CAD27462) Nucleosome assembly protein
1-like protein 3, partial (81%)
Length = 1298
Score = 41.2 bits (95), Expect = 2e-04
Identities = 23/59 (38%), Positives = 37/59 (61%)
Frame = +2
Query: 175 LIPDQVSLEEEEEEIEEEDDQDEIEEDQEQEEEELVEEEEELEEEVALDDDEKEEEEEE 233
+IP VS E E + D ++IEED E +E+ E++++ EEE DDD++++EE E
Sbjct: 710 IIPHAVSWFTGEAE---QSDFEDIEEDDEDGDEDEDEDDDDDEEEEDDDDDDEDDEEGE 877
Score = 31.6 bits (70), Expect = 0.16
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -1
Query: 248 HEGYRRCHEMVNQHHHHHHNVHGNHHHNHI 277
H +R H + HHHHH ++H +HH +H+
Sbjct: 863 HPHHRHRHPLP-LHHHHHLHLHLHHHLHHL 777
>AV408295
Length = 426
Score = 41.2 bits (95), Expect = 2e-04
Identities = 21/60 (35%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Frame = +3
Query: 181 SLEEEEEEIEEEDDQDEIEEDQEQE-EEELVEEEEELEEEVALDDDEKEEEEEEIECERE 239
S E +++E+ ++++EE++E++ EEE EEE +EEV ++ + EEE++ E E E
Sbjct: 138 STEAKKDEVAAAATEEKVEEEEEKKTEEEKKPAEEEKKEEVVEEEKKPAEEEKKAEAEGE 317
Score = 40.0 bits (92), Expect = 5e-04
Identities = 24/67 (35%), Positives = 41/67 (60%), Gaps = 3/67 (4%)
Frame = +3
Query: 178 DQVSLEEEEEEIEEEDDQDEIEED---QEQEEEELVEEEEELEEEVALDDDEKEEEEEEI 234
D+V+ EE++EEE+++ EE +E+++EE+VEEE++ EE ++K E E E
Sbjct: 156 DEVAAAATEEKVEEEEEKKTEEEKKPAEEEKKEEVVEEEKKPAEE-----EKKAEAEGEA 320
Query: 235 ECEREER 241
EE+
Sbjct: 321 TTSGEEK 341
Score = 34.7 bits (78), Expect = 0.019
Identities = 21/57 (36%), Positives = 29/57 (50%)
Frame = +3
Query: 183 EEEEEEIEEEDDQDEIEEDQEQEEEELVEEEEELEEEVALDDDEKEEEEEEIECERE 239
EEEE++ EEE E E+ +E EEE EEE + E + EE+ +E E
Sbjct: 195 EEEEKKTEEEKKPAEEEKKEEVVEEEKKPAEEEKKAEAEGEATTSGEEKNVVEAVTE 365
Score = 28.1 bits (61), Expect = 1.8
Identities = 20/72 (27%), Positives = 34/72 (46%), Gaps = 2/72 (2%)
Frame = +3
Query: 175 LIPDQVSLEEEEEEIEEEDDQDEIEEDQEQEEEELVEEEEELEEEVALDDDEKEEEEEEI 234
LI D ++ E + E +++ EE+ E EEE ++++K EEE+
Sbjct: 72 LIQDALNKHELSAPPPPKAPSPSTEAKKDEVAAAATEEKVEEEEEKKTEEEKKPAEEEKK 251
Query: 235 E--CEREERVAE 244
E E E++ AE
Sbjct: 252 EEVVEEEKKPAE 287
>BF177554
Length = 246
Score = 40.4 bits (93), Expect = 3e-04
Identities = 21/50 (42%), Positives = 32/50 (64%)
Frame = +1
Query: 184 EEEEEIEEEDDQDEIEEDQEQEEEELVEEEEELEEEVALDDDEKEEEEEE 233
E+++E E++ E E++E+EEEE EEEEE + D +EEEEE+
Sbjct: 16 EQQDEDSCEEEAGESSEEEEEEEEEGEEEEEEDDGPGDRDAQPEEEEEED 165
Score = 39.7 bits (91), Expect = 6e-04
Identities = 21/49 (42%), Positives = 30/49 (60%)
Frame = +1
Query: 187 EEIEEEDDQDEIEEDQEQEEEELVEEEEELEEEVALDDDEKEEEEEEIE 235
E+ +E+ ++E E E+EEEE E EEE EE+ D + + EEEE E
Sbjct: 16 EQQDEDSCEEEAGESSEEEEEEEEEGEEEEEEDDGPGDRDAQPEEEEEE 162
Score = 39.3 bits (90), Expect = 8e-04
Identities = 22/53 (41%), Positives = 33/53 (61%)
Frame = +1
Query: 181 SLEEEEEEIEEEDDQDEIEEDQEQEEEELVEEEEELEEEVALDDDEKEEEEEE 233
S +++E+ EEE + EE++E+EE EEEE E++ D D + EEEEE
Sbjct: 13 SEQQDEDSCEEEAGESSEEEEEEEEE----GEEEEEEDDGPGDRDAQPEEEEE 159
Score = 33.9 bits (76), Expect = 0.032
Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 5/50 (10%)
Frame = +1
Query: 178 DQVSLEEE-----EEEIEEEDDQDEIEEDQEQEEEELVEEEEELEEEVAL 222
D+ S EEE EEE EEE++ +E EE+ + + + EEE EE+ +L
Sbjct: 25 DEDSCEEEAGESSEEEEEEEEEGEEEEEEDDGPGDRDAQPEEEEEEDFSL 174
Score = 32.3 bits (72), Expect = 0.095
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +1
Query: 211 EEEEELEEEVALDDDEKEEEEEEIECEREE 240
++E+ EEE +E+EEEEEE E E EE
Sbjct: 22 QDEDSCEEEAGESSEEEEEEEEEGEEEEEE 111
Score = 26.9 bits (58), Expect = 4.0
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +1
Query: 183 EEEEEEIEEEDDQDEIEEDQEQEEEELV 210
EEEEEE + D+D E++E+E+ L+
Sbjct: 94 EEEEEEDDGPGDRDAQPEEEEEEDFSLL 177
>BI420041
Length = 452
Score = 40.4 bits (93), Expect = 3e-04
Identities = 30/108 (27%), Positives = 53/108 (48%), Gaps = 17/108 (15%)
Frame = +2
Query: 125 PPLSSLNRNGKPSFFLRP-VRKDGRLELTEVRIHRAE----ILHASRH---DGRLTLH-L 175
PPL ++ + +F+ P K+ + ++ + ILH + D L
Sbjct: 47 PPLINITTSTATTFYFSPRSSKNFSFPFSTFQVQHTQLKPLILHGKKRNSSDSEPVLEPT 226
Query: 176 IPDQVSLEEEEEEI--------EEEDDQDEIEEDQEQEEEELVEEEEE 215
I +VS++EEE++ +E++D DE +D EQEEEE +E+E+
Sbjct: 227 IVQEVSMDEEEDDEFDYEEPLNDEDEDGDEYYDDDEQEEEEFEDEDED 370
Score = 39.3 bits (90), Expect = 8e-04
Identities = 24/52 (46%), Positives = 32/52 (61%)
Frame = +2
Query: 186 EEEIEEEDDQDEIEEDQEQEEEELVEEEEELEEEVALDDDEKEEEEEEIECE 237
E I +E DE E+D+ EE L +E+E+ +E DDDE+EEEE E E E
Sbjct: 218 EPTIVQEVSMDEEEDDEFDYEEPLNDEDEDGDEYY--DDDEQEEEEFEDEDE 367
>BP038960
Length = 524
Score = 40.0 bits (92), Expect = 5e-04
Identities = 27/55 (49%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = +3
Query: 197 EIEEDQEQEEEELVEEEEELEEEVA-LDDDEKEEEEEEIECEREERVAEWGFHEG 250
E E Q Q+ E E+ EEE A DDDE+EEEEEE E E +RVA G +G
Sbjct: 252 EGEHTQLQKGEAEQPRVEDSEEEAADYDDDEEEEEEEEEEDEHADRVAVSGPGKG 416
Score = 35.4 bits (80), Expect = 0.011
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Frame = +3
Query: 179 QVSLEEEEEEIEEEDDQDEIEEDQEQEEEELVEEEEELEEEVALDDDEK----EEEEEEI 234
Q+ E E+ E+ +++ + D ++EEEE EEE+E + VA+ K E E+
Sbjct: 267 QLQKGEAEQPRVEDSEEEAADYDDDEEEEEEEEEEDEHADRVAVSGPGKGPILREGFYEV 446
Query: 235 ECEREERV 242
E R +R+
Sbjct: 447 EAIRRKRI 470
Score = 28.9 bits (63), Expect = 1.0
Identities = 15/67 (22%), Positives = 35/67 (51%)
Frame = +3
Query: 183 EEEEEEIEEEDDQDEIEEDQEQEEEELVEEEEELEEEVALDDDEKEEEEEEIECEREERV 242
E E ++++ + + ED E+E + ++EEE EEE +++++ + + + +
Sbjct: 252 EGEHTQLQKGEAEQPRVEDSEEEAADYDDDEEEEEEE---EEEDEHADRVAVSGPGKGPI 422
Query: 243 AEWGFHE 249
GF+E
Sbjct: 423 LREGFYE 443
>TC9175 weakly similar to UP|INAD_DROME (Q24008)
Inactivation-no-after-potential D protein, partial (5%)
Length = 692
Score = 40.0 bits (92), Expect = 5e-04
Identities = 23/71 (32%), Positives = 42/71 (58%), Gaps = 3/71 (4%)
Frame = +2
Query: 183 EEEEEEIEEEDDQDEIEEDQEQEEEELVEE---EEELEEEVALDDDEKEEEEEEIECERE 239
+++ + + + + + E +E+ ++EE+ EE EE+ EEE A ++ +KEE EE +E
Sbjct: 32 KKQAKIVPQPEPEPEKKEEGKEEEKPAAEEGKPEEKKEEEKAAEEAKKEEGGEEKNDNKE 211
Query: 240 ERVAEWGFHEG 250
E+ E G EG
Sbjct: 212 EKGGEEGKEEG 244
>AV411437
Length = 417
Score = 39.3 bits (90), Expect = 8e-04
Identities = 20/44 (45%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Frame = +2
Query: 195 QDEIEEDQEQEEEELVEEEEELEEEVA-LDDDEKEEEEEEIECE 237
Q+ I E++E+EEEE EEE+ ++ E+ DDDE + E++E+E E
Sbjct: 41 QETIAEEEEEEEEE--EEEDGVDGELEQFDDDETDSEDDELETE 166
Score = 38.1 bits (87), Expect = 0.002
Identities = 18/42 (42%), Positives = 31/42 (72%), Gaps = 1/42 (2%)
Frame = +2
Query: 179 QVSLEEEEEEIEEEDDQDEIEEDQEQ-EEEELVEEEEELEEE 219
Q ++ EEEEE EEE+++D ++ + EQ +++E E++ELE E
Sbjct: 41 QETIAEEEEEEEEEEEEDGVDGELEQFDDDETDSEDDELETE 166
>TC14994 similar to UP|O82469 (O82469) Protein phosphatase-2C , partial
(89%)
Length = 1672
Score = 38.9 bits (89), Expect = 0.001
Identities = 16/29 (55%), Positives = 24/29 (82%)
Frame = +2
Query: 180 VSLEEEEEEIEEEDDQDEIEEDQEQEEEE 208
V EEEEE+EEE++++E EE++E+EE E
Sbjct: 149 VIAREEEEEVEEEEEEEEEEEEEEEEEAE 235
Score = 37.0 bits (84), Expect = 0.004
Identities = 20/74 (27%), Positives = 37/74 (49%)
Frame = +2
Query: 187 EEIEEEDDQDEIEEDQEQEEEELVEEEEELEEEVALDDDEKEEEEEEIECEREERVAEWG 246
+ + ++++E+EE++E+EEEE EEEEE E+ + + CE E
Sbjct: 143 QSVIAREEEEEVEEEEEEEEEEEEEEEEEAEKNGG*SRNRVST*HGCVGCEVFSE*REQY 322
Query: 247 FHEGYRRCHEMVNQ 260
+ RCH + ++
Sbjct: 323 SRDR*CRCHHLTSE 364
Score = 34.7 bits (78), Expect = 0.019
Identities = 14/29 (48%), Positives = 24/29 (82%)
Frame = +2
Query: 180 VSLEEEEEEIEEEDDQDEIEEDQEQEEEE 208
++ EEEEE EEE++++E EE++E+E E+
Sbjct: 152 IAREEEEEVEEEEEEEEEEEEEEEEEAEK 238
Score = 30.0 bits (66), Expect = 0.47
Identities = 12/24 (50%), Positives = 20/24 (83%)
Frame = +2
Query: 178 DQVSLEEEEEEIEEEDDQDEIEED 201
++V EEEEEE EEE++++E E++
Sbjct: 170 EEVEEEEEEEEEEEEEEEEEAEKN 241
Score = 28.5 bits (62), Expect = 1.4
Identities = 11/25 (44%), Positives = 20/25 (80%)
Frame = +2
Query: 178 DQVSLEEEEEEIEEEDDQDEIEEDQ 202
++ +EEEEEE EEE++++E E ++
Sbjct: 164 EEEEVEEEEEEEEEEEEEEEEEAEK 238
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.312 0.132 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,980,070
Number of Sequences: 28460
Number of extensions: 114679
Number of successful extensions: 6379
Number of sequences better than 10.0: 506
Number of HSP's better than 10.0 without gapping: 2431
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4335
length of query: 285
length of database: 4,897,600
effective HSP length: 89
effective length of query: 196
effective length of database: 2,364,660
effective search space: 463473360
effective search space used: 463473360
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 55 (25.8 bits)
Lotus: description of TM0544.6