TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0487.13
         (394 letters)

Database: LJGI 
           28,460 sequences; 14,692,800 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC12546 weakly similar to UP|Q9FJ30 (Q9FJ30) Similarity to heat ...   204  2e-53
TC13234                                                               202  6e-53
AV780048                                                              179  7e-46
AV423751                                                              169  7e-43
TC10363                                                               160  3e-40
TC11473                                                               145  1e-35
BI418251                                                              137  2e-33
BP050969                                                              115  1e-26
TC11299                                                               114  4e-26
BP076293                                                              104  3e-23
BP050628                                                               95  2e-20
TC17755                                                                94  3e-20
AU088858                                                               92  1e-19
CB829128                                                               92  1e-19
TC11091                                                                89  1e-18
BP037574                                                               88  2e-18
TC15781                                                                88  3e-18
AV428270                                                               86  1e-17
TC18718                                                                79  2e-15
BP051310                                                               73  7e-14

>TC12546 weakly similar to UP|Q9FJ30 (Q9FJ30) Similarity to heat shock
           transcription factor HSF30, partial (9%)
          Length = 755

 Score =  204 bits (519), Expect = 2e-53
 Identities = 123/217 (56%), Positives = 149/217 (67%), Gaps = 19/217 (8%)
 Frame = +2

Query: 1   MKKMKMEDRFSSLPDPILCHILSLLTTKEAVTTSILSKRWIPLWRSVPTLDFDDSNLYGG 60
           MKKMKMED  S+LPD +LCHILS LT+KEAV TS+LS+RWIPLWRSVPTL F D+N +  
Sbjct: 128 MKKMKMEDGISTLPDALLCHILSFLTSKEAVATSVLSRRWIPLWRSVPTLHFKDANYHTD 307

Query: 61  ---------DEVYARFVEAVYKVILARDFNQPIKKFRLVLTERLK---DPANISVWVNLV 108
                     +V +R V++VY VIL+RDF  PIKKF L L +  +   DPAN+SVWVN V
Sbjct: 308 IGHADHDIVKDVRSRHVQSVYAVILSRDFQLPIKKFYLRLNDVCQPFYDPANVSVWVNAV 487

Query: 109 LKRRVEHIDISLHFEDDEFLELPHIVVDTP-----SMFSCTTLVVLKLE-GLELKANFSS 162
           ++R++EH+DIS          LP+ ++ TP     S+FSC TLVVLKL  GLELK  F S
Sbjct: 488 VQRQLEHLDIS----------LPYPMLSTPRANLSSIFSCRTLVVLKLRGGLELK-RFPS 634

Query: 163 VDLPFLKVLHLQD-LLLQDEGCLAEILSGCLALEDLK 198
           V  P LKVLHLQ  LLL D   LAE+LSGC  LE+LK
Sbjct: 635 VHFPCLKVLHLQGALLLHDVPYLAELLSGCPVLENLK 745


>TC13234 
          Length = 609

 Score =  202 bits (515), Expect = 6e-53
 Identities = 102/157 (64%), Positives = 120/157 (75%), Gaps = 4/157 (2%)
 Frame = +3

Query: 242 SFLRIHEIDYNLI-YMGED--MFHNLTHLELVYTTFNRDWFEVLEFLKYCPKLEVLVIKQ 298
           +FLRI +ID+ L+ Y GED  MFHNLT +ELVYT   RDW +V+EFLKYCPKL+VLVIKQ
Sbjct: 3   NFLRIRDIDFRLLPYGGEDIDMFHNLTRVELVYTGHTRDWLDVVEFLKYCPKLQVLVIKQ 182

Query: 299 PQFYNVY-LNKLGAKDWQYPSSVPECILLHLKECCLNHYRGTKGELQFAKYIMEHGRLLN 357
           PQ    Y + +L   DWQYPSSVP+CIL HLKEC LN+YRGTKGE +FA+YIM +GR L 
Sbjct: 183 PQVDGYYTVGELRGNDWQYPSSVPKCILFHLKECYLNNYRGTKGEFKFARYIMRNGRFLK 362

Query: 358 KMTICSSTAEKQGEKLENLKKLFSCTRCSATCKFSFK 394
           KMTIC  TA KQ  K  ++KKLFSC+  SATCK  FK
Sbjct: 363 KMTICKCTAVKQLGKPNDIKKLFSCSARSATCKLYFK 473


>AV780048 
          Length = 501

 Score =  179 bits (454), Expect = 7e-46
 Identities = 88/90 (97%), Positives = 88/90 (97%)
 Frame = +2

Query: 1   MKKMKMEDRFSSLPDPILCHILSLLTTKEAVTTSILSKRWIPLWRSVPTLDFDDSNLYGG 60
           MKKMKMEDRFSSLPDPILCHILSLLTTKEAVTTSILSKRWIPLWRSVPTLDFDDSN YGG
Sbjct: 230 MKKMKMEDRFSSLPDPILCHILSLLTTKEAVTTSILSKRWIPLWRSVPTLDFDDSNWYGG 409

Query: 61  DEVYARFVEAVYKVILARDFNQPIKKFRLV 90
           DEVYAR VEAVYKVILARDFNQPIKKFRLV
Sbjct: 410 DEVYARLVEAVYKVILARDFNQPIKKFRLV 499


>AV423751 
          Length = 254

 Score =  169 bits (428), Expect = 7e-43
 Identities = 84/84 (100%), Positives = 84/84 (100%)
 Frame = +2

Query: 115 HIDISLHFEDDEFLELPHIVVDTPSMFSCTTLVVLKLEGLELKANFSSVDLPFLKVLHLQ 174
           HIDISLHFEDDEFLELPHIVVDTPSMFSCTTLVVLKLEGLELKANFSSVDLPFLKVLHLQ
Sbjct: 2   HIDISLHFEDDEFLELPHIVVDTPSMFSCTTLVVLKLEGLELKANFSSVDLPFLKVLHLQ 181

Query: 175 DLLLQDEGCLAEILSGCLALEDLK 198
           DLLLQDEGCLAEILSGCLALEDLK
Sbjct: 182 DLLLQDEGCLAEILSGCLALEDLK 253


>TC10363 
          Length = 387

 Score =  160 bits (405), Expect = 3e-40
 Identities = 75/77 (97%), Positives = 75/77 (97%)
 Frame = +3

Query: 317 PSSVPECILLHLKECCLNHYRGTKGELQFAKYIMEHGRLLNKMTICSSTAEKQGEKLENL 376
           PSSVPECILLHLKECCLNHYRGTKGELQFAKYIMEHGRLLNKMTICSS AEKQGEKLENL
Sbjct: 3   PSSVPECILLHLKECCLNHYRGTKGELQFAKYIMEHGRLLNKMTICSSPAEKQGEKLENL 182

Query: 377 KKLFSCTRCSATCKFSF 393
           KKLFSC RCSATCKFSF
Sbjct: 183 KKLFSCPRCSATCKFSF 233


>TC11473 
          Length = 435

 Score =  145 bits (365), Expect = 1e-35
 Identities = 71/100 (71%), Positives = 79/100 (79%)
 Frame = +2

Query: 294 LVIKQPQFYNVYLNKLGAKDWQYPSSVPECILLHLKECCLNHYRGTKGELQFAKYIMEHG 353
           LVI QP FY+  L++L   DWQ P SVP+CILLHLK C LN YRGTKGELQFA+YIM HG
Sbjct: 2   LVINQPDFYDYDLDQLHISDWQDPPSVPKCILLHLKVCYLNDYRGTKGELQFARYIMRHG 181

Query: 354 RLLNKMTICSSTAEKQGEKLENLKKLFSCTRCSATCKFSF 393
           R L +MTI SS AE Q  KL+N+KKLFSCTR SATCKFSF
Sbjct: 182 RFLKRMTISSSPAENQRGKLKNVKKLFSCTRRSATCKFSF 301


>BI418251 
          Length = 546

 Score =  137 bits (346), Expect = 2e-33
 Identities = 83/185 (44%), Positives = 114/185 (60%), Gaps = 3/185 (1%)
 Frame = +1

Query: 6   MEDRFSSLPDPILCHILSLLTTKEAVTTSILSKRWIPLWRSVPTLDFDDSNLYGGD--EV 63
           M DR S LPD +LC ILS L T++AV TS+L KRW  LW SVPTLDFDD     G   ++
Sbjct: 31  MADRISKLPDEVLCQILSFLPTEDAVATSVLCKRWSSLWLSVPTLDFDDYRYLKGKKLKL 210

Query: 64  YARFVEAVYKVILARDFNQPIKKFRL-VLTERLKDPANISVWVNLVLKRRVEHIDISLHF 122
            + F+  VY +IL+R  +QPIK F L V++E    P ++ VW+N  ++R+VE++DI L  
Sbjct: 211 QSSFINFVYAIILSRALHQPIKNFTLSVISEECPYP-DVKVWLNAAMQRQVENLDICLSL 387

Query: 123 EDDEFLELPHIVVDTPSMFSCTTLVVLKLEGLELKANFSSVDLPFLKVLHLQDLLLQDEG 182
                  LP       S+ SCTTLVVLKL  ++    FS VDLP LK LHL+ +++ +  
Sbjct: 388 S-----TLP------CSILSCTTLVVLKLSDVKFHV-FSCVDLPSLKTLHLELVVILNPQ 531

Query: 183 CLAEI 187
            L ++
Sbjct: 532 SLMDL 546


>BP050969 
          Length = 557

 Score =  115 bits (288), Expect(2) = 1e-26
 Identities = 52/82 (63%), Positives = 61/82 (73%)
 Frame = -3

Query: 259 DMFHNLTHLELVYTTFNRDWFEVLEFLKYCPKLEVLVIKQPQFYNVYLNKLGAKDWQYPS 318
           DMFHNLTH+E+VY  FN DWFEV+EFL +CPKL+ LVI QP+F+   L +      QYP 
Sbjct: 306 DMFHNLTHVEIVYANFNEDWFEVVEFLTHCPKLQTLVISQPKFHEYGLGEYEVGFGQYPL 127

Query: 319 SVPECILLHLKECCLNHYRGTK 340
            VP+CIL HLKEC LN YRGTK
Sbjct: 126 HVPKCILRHLKECYLNDYRGTK 61



 Score = 37.7 bits (86), Expect = 0.003
 Identities = 20/38 (52%), Positives = 28/38 (73%)
 Frame = -1

Query: 212 EFITLPKLVRADISESGGSQHFMMKVVNNVSFLRIHEI 249
           +F TLPKLVRA ISE     + +++V+NNV FLRI ++
Sbjct: 539 KFKTLPKLVRAHISEG----YPIVEVINNVKFLRIDQV 438



 Score = 21.2 bits (43), Expect(2) = 1e-26
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -2

Query: 340 KGELQFAKYIM 350
           KGE  FA+YIM
Sbjct: 64  KGEFXFARYIM 32


>TC11299 
          Length = 498

 Score =  114 bits (284), Expect = 4e-26
 Identities = 68/145 (46%), Positives = 88/145 (59%), Gaps = 5/145 (3%)
 Frame = +1

Query: 6   MEDRFSSLPDPILCHILSLLTTKEAVTTSILSKRWIPLWRSVPTLDFDDSNLYGGDEVYA 65
           M DR S+LPD I+CHILS L T+ AV T++LSKRW  LWRSV  LDF    +Y  D+   
Sbjct: 79  MVDRISALPDEIICHILSFLPTENAVATAVLSKRWTHLWRSVSALDFSSVRMYEPDDHRF 258

Query: 66  RFVEAVYKVILARDFNQPIKKFRLVLTERLK----DPANISVWVNLVLKRRVEHID-ISL 120
            F + VY V+L R+   PIKKF L L + +     D ANI  WVN V + RV  I+ + L
Sbjct: 259 FFSDIVYSVLLFRNAATPIKKFSLELDDDVAVANLDIANIHKWVNFVTQCRVGGIEHLRL 438

Query: 121 HFEDDEFLELPHIVVDTPSMFSCTT 145
           HF D  F++LP + +   S+ SC T
Sbjct: 439 HFMD--FIQLPQLPI---SILSCKT 498


>BP076293 
          Length = 485

 Score =  104 bits (259), Expect = 3e-23
 Identities = 50/82 (60%), Positives = 58/82 (69%)
 Frame = -2

Query: 312 KDWQYPSSVPECILLHLKECCLNHYRGTKGELQFAKYIMEHGRLLNKMTICSSTAEKQGE 371
           +DWQ     PECI LHLK C LN YRGT+GE QFA+YI+++GR+L  M ICS    KQ E
Sbjct: 469 RDWQCSLPGPECIQLHLKRCYLNDYRGTEGEFQFARYILQNGRVLESMIICSFPDVKQQE 290

Query: 372 KLENLKKLFSCTRCSATCKFSF 393
           K ENLKKL SCTR S TC+  F
Sbjct: 289 KHENLKKLSSCTRLSPTCELLF 224


>BP050628 
          Length = 523

 Score = 94.7 bits (234), Expect = 2e-20
 Identities = 48/127 (37%), Positives = 74/127 (57%)
 Frame = -3

Query: 268 ELVYTTFNRDWFEVLEFLKYCPKLEVLVIKQPQFYNVYLNKLGAKDWQYPSSVPECILLH 327
           EL+ +    +W  VL  LK CPKL+ L++      ++  +      W  P + PEC+   
Sbjct: 521 ELMMSGIGMNWHLVLAMLKKCPKLQKLLL------DMKASSTHDMVWTSPFNDPECLSSQ 360

Query: 328 LKECCLNHYRGTKGELQFAKYIMEHGRLLNKMTICSSTAEKQGEKLENLKKLFSCTRCSA 387
           L++C + +Y+GTK EL FA YIM+  R+L  M I ++ + +QG+K E +K+L  C R SA
Sbjct: 359 LRKCSITNYKGTKSELHFATYIMQSSRVLQTMAIDTAPSSEQGDKFEMIKELSLCPRSSA 180

Query: 388 TCKFSFK 394
            C+ SFK
Sbjct: 179 ICQLSFK 159


>TC17755 
          Length = 776

 Score = 94.4 bits (233), Expect = 3e-20
 Identities = 67/182 (36%), Positives = 92/182 (49%), Gaps = 1/182 (0%)
 Frame = +2

Query: 213 FITLPKLVRADISESGGSQHFMMKVVNNVSFLRIHEIDYNLIYMGEDMFHNLTHLELVYT 272
           F +L KLVRADI   G              F+   E D  L  +   +F NLTH EL+  
Sbjct: 74  FKSLSKLVRADIHAIGFD-----------IFVESPEFDKYLDDI--PLFPNLTHAELMLG 214

Query: 273 TFNRDWFEVLEFLKYCPKLEVLVIKQPQFYNVYLNKLGAKDWQYPSSVPECILLHLKECC 332
            F+  W  VL  LK+CP L+ +V+     Y  Y   +    W  P  VPEC+   L+ C 
Sbjct: 215 -FDMSWDLVLAILKHCPMLQNVVLDMQTHYAYYKEPV----WISPCCVPECLSSQLRTCD 379

Query: 333 LNHYRGTKGELQFAKYIMEHGRLLNKMTICS-STAEKQGEKLENLKKLFSCTRCSATCKF 391
           + +    + EL FAKYIM++ R+L  MTI +   +E   +K+E LK+LF C R S  C+ 
Sbjct: 380 IINSEVKESELHFAKYIMQNSRVLRTMTIWTRGLSELNVDKIELLKELFLCPRSSTICEL 559

Query: 392 SF 393
           SF
Sbjct: 560 SF 565


>AU088858 
          Length = 765

 Score = 92.0 bits (227), Expect = 1e-19
 Identities = 65/183 (35%), Positives = 96/183 (51%), Gaps = 2/183 (1%)
 Frame = +3

Query: 160 FSSVDLPFLKVLHLQDLLLQDEGCLAEILSGCLALEDLK-ARDVFFD-GNKADAEFITLP 217
           FS V LP LK L L  L+  +   + E+LSGC  LE +  +R  + D  + ++    +L 
Sbjct: 6   FSFVHLPSLKTLQLYCLIFPEPQYVMELLSGCPILEYMHLSRMRYADCSSPSNTNVKSLT 185

Query: 218 KLVRADISESGGSQHFMMKVVNNVSFLRIHEIDYNLIYMGEDMFHNLTHLELVYTTFNRD 277
           KLV ADIS  G      +KV+ NV FLRI +  Y +      +F NLTHLEL+ +    +
Sbjct: 186 KLVSADISFIGFE--IPLKVICNVEFLRIDKYPYEI-----PVFPNLTHLELMMSGIGMN 344

Query: 278 WFEVLEFLKYCPKLEVLVIKQPQFYNVYLNKLGAKDWQYPSSVPECILLHLKECCLNHYR 337
           W  VL  LK CPKL+ L++      ++  +      W  P + P C+   L +C + +Y+
Sbjct: 345 WHLVLAMLKKCPKLQKLLL------DMKASSTHDMVWTSPFNDPXCLSSQLXKCSITNYK 506

Query: 338 GTK 340
           GTK
Sbjct: 507 GTK 515


>CB829128 
          Length = 463

 Score = 92.0 bits (227), Expect = 1e-19
 Identities = 62/153 (40%), Positives = 91/153 (58%), Gaps = 2/153 (1%)
 Frame = +3

Query: 99  ANISVWVNLVLKRRVEHIDISLHFEDDEFLELPHIVVDTPSMFSCTTLVVLKLEGLELKA 158
           +++ VW+N  ++R+VE+++I L        ++P       S+  CTTLV+LKL+ +   A
Sbjct: 18  SDLKVWLNAAIQRQVENLEIELTDS-----QMPC------SILRCTTLVILKLDSVTFDA 164

Query: 159 NFSSVDLPFLKVLHLQDLLLQDEGCLAEILSGCLALEDLKARDVFFDGNKADAEFITLPK 218
            F+SV LP LK LHL ++ L    CL ++L GC  LEDLK +  F DG+  + +  TL K
Sbjct: 165 -FTSVYLPSLKTLHLFEVDLVKAQCLIDLLYGCPILEDLKTQIYFRDGS-FEGKVKTLSK 338

Query: 219 LVRADISESGGSQHFM--MKVVNNVSFLRIHEI 249
           LVRAD+   G   HF+  +K   NV FLRI E+
Sbjct: 339 LVRADVFLDG---HFIIPVKAFQNVEFLRIEEV 428


>TC11091 
          Length = 502

 Score = 89.0 bits (219), Expect = 1e-18
 Identities = 42/73 (57%), Positives = 54/73 (73%)
 Frame = +3

Query: 322 ECILLHLKECCLNHYRGTKGELQFAKYIMEHGRLLNKMTICSSTAEKQGEKLENLKKLFS 381
           ECILLHL+EC LN YR T+GE QFA+++M++GR L KMT CS     Q  +LE ++KL S
Sbjct: 3   ECILLHLEECYLNDYRXTQGEFQFARHVMQNGRSLKKMTTCSGDFINQQGRLELIEKLSS 182

Query: 382 CTRCSATCKFSFK 394
           CTR SATC+  F+
Sbjct: 183 CTRHSATCELYFE 221


>BP037574 
          Length = 431

 Score = 88.2 bits (217), Expect = 2e-18
 Identities = 44/75 (58%), Positives = 51/75 (67%)
 Frame = -2

Query: 320 VPECILLHLKECCLNHYRGTKGELQFAKYIMEHGRLLNKMTICSSTAEKQGEKLENLKKL 379
           VPE ILL LK C LN YRGT+ E QFA+YIM++G  L  M IC S    Q  KL+NL++L
Sbjct: 430 VPEYILLRLKRCYLNEYRGTRAEFQFARYIMQNGIFLENMAICCSYEVNQEGKLKNLQEL 251

Query: 380 FSCTRCSATCKFSFK 394
             CTR SA CK SFK
Sbjct: 250 SLCTRKSAACKLSFK 206


>TC15781 
          Length = 621

 Score = 87.8 bits (216), Expect = 3e-18
 Identities = 67/184 (36%), Positives = 98/184 (52%), Gaps = 5/184 (2%)
 Frame = +2

Query: 71  VYKVILARDFNQPIKKFRLVL--TERLKDPANISVWVNLVLKRRVEHIDISLHFEDDEFL 128
           V   ILARD  QPI +F L+   T  L+    +  W+N V+ RR+E+++I +        
Sbjct: 26  VNATILARDERQPITRF*LLYESTVSLEGSDLVHDWLNTVMPRRIENLEICIP------- 184

Query: 129 ELPHIVVDTPSMFSCTTLVVLKLEGLELKANFSS-VDLPFLKVLHLQDLLLQDEGCLAEI 187
             P        ++SC TLVVLKL+G  L    SS V+LP LK LHL+ +   D     ++
Sbjct: 185 --PLSRGIGLKIYSCRTLVVLKLKGYPLGVYVSSHVELPSLKSLHLEKVHFVDFQSFLKL 358

Query: 188 LSGCLALEDLKARDVFFDGNKADAE--FITLPKLVRADISESGGSQHFMMKVVNNVSFLR 245
           + GC  LEDL+A  V +     D E  F +LPKLV   I++   +  F +K+++N  FL 
Sbjct: 359 ICGCPLLEDLEAGTVSYLDTSFDQEFRFRSLPKLVSVVINDY--NFRFPLKIISNAEFLS 532

Query: 246 IHEI 249
           I E+
Sbjct: 533 IEEV 544


>AV428270 
          Length = 428

 Score = 85.5 bits (210), Expect = 1e-17
 Identities = 59/155 (38%), Positives = 84/155 (54%), Gaps = 7/155 (4%)
 Frame = +1

Query: 186 EILSGCLALEDLKARDVFFDGNKA-----DAEFITLPKLVRADISESGGSQHFMMKVVNN 240
           E L+GC  LE+LKAR ++  G  +     +   + LPKL+RADI  S   +  M++   N
Sbjct: 1   EFLAGCPILENLKARRIWITGESSFYRGGELADLGLPKLIRADIVRS---RLPMLQPFYN 171

Query: 241 VSFLR--IHEIDYNLIYMGEDMFHNLTHLELVYTTFNRDWFEVLEFLKYCPKLEVLVIKQ 298
           V+FLR  I E+ Y   Y     FHNLTHLELV   +N     ++E LK+CP L+ LV ++
Sbjct: 172 VAFLRVDIEEVHYAFPY-----FHNLTHLELVIELYNS--LVLVEMLKHCPNLQSLVFER 330

Query: 299 PQFYNVYLNKLGAKDWQYPSSVPECILLHLKECCL 333
                    +   ++W  P  VPEC+  +LK C L
Sbjct: 331 LD----EAQRCDPENWIDPEFVPECLSFNLKTCTL 423


>TC18718 
          Length = 518

 Score = 78.6 bits (192), Expect = 2e-15
 Identities = 46/104 (44%), Positives = 60/104 (57%), Gaps = 8/104 (7%)
 Frame = +1

Query: 234 MMKVVNNVSFLRIHEIDYNLIY--------MGEDMFHNLTHLELVYTTFNRDWFEVLEFL 285
           +M+ V NV FLRI+E+     +         G   FHNLTH+EL Y     DW  V+E L
Sbjct: 7   LMEAVKNVEFLRIYEMQRLRRHDDGEGAGPYGFPKFHNLTHIELEYNCRISDWLTVVELL 186

Query: 286 KYCPKLEVLVIKQPQFYNVYLNKLGAKDWQYPSSVPECILLHLK 329
           K+CPKL+VLVI Q    + +   +  +DW+YP SVPE I L LK
Sbjct: 187 KHCPKLQVLVINQSCLPDDFGEVV--EDWEYPPSVPESIQLCLK 312


>BP051310 
          Length = 467

 Score = 73.2 bits (178), Expect = 7e-14
 Identities = 39/108 (36%), Positives = 61/108 (56%), Gaps = 5/108 (4%)
 Frame = -3

Query: 286 KYCPKLEVLVIKQPQFYNVYLNKLGAKDWQYPSSVPECILLHLKECCLNHYRGTKGELQF 345
           K+CPKL+ LV+++P+  +  L      +W  P  VPEC+ L+LK C    ++G K E Q 
Sbjct: 465 KHCPKLQSLVLERPE-ESRDLENCDLGNWVDPDFVPECLALNLKSCTFRDFKGLKVEFQL 289

Query: 346 AKYIMEHGRLLNKMTICSSTAEKQGEKLENLKKLFSC-----TRCSAT 388
           A Y++++ R+L  MTIC+  +  Q      +KKL+S      +RC  T
Sbjct: 288 ASYVLKNARVLETMTICNQQSISQ----RQIKKLYSAALRSPSRCQIT 157


  Database: LJGI
    Posted date:  Jul 30, 2004 11:16 AM
  Number of letters in database: 14,692,800
  Number of sequences in database:  28,460
  
Lambda     K      H
   0.324    0.140    0.423 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,535,152
Number of Sequences: 28460
Number of extensions: 108070
Number of successful extensions: 842
Number of sequences better than 10.0: 76
Number of HSP's better than 10.0 without gapping: 808
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 816
length of query: 394
length of database: 4,897,600
effective HSP length: 92
effective length of query: 302
effective length of database: 2,279,280
effective search space: 688342560
effective search space used: 688342560
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 56 (26.2 bits)