BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0438.5
(434 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BP071294 99 1e-21
AV427333 46 1e-05
TC13980 similar to UP|Q9SGT0 (Q9SGT0) T6H22.18 protein (F14J16.3... 46 1e-05
TC8984 similar to UP|Q8LBA3 (Q8LBA3) Phosphoserine aminotransfer... 45 2e-05
AV409241 44 4e-05
TC14279 similar to UP|Q09085 (Q09085) Hydroxyproline-rich glycop... 44 7e-05
TC8682 similar to UP|HPPD_SOLSC (Q9ARF9) 4-hydroxyphenylpyruvate... 43 9e-05
CN825698 43 9e-05
BP030058 43 1e-04
BI420016 42 2e-04
TC14757 similar to UP|O04361 (O04361) Prohibitin, complete 42 2e-04
TC7822 similar to UP|Q42139 (Q42139) H+-transporting ATP synthas... 42 2e-04
AV410227 42 2e-04
TC14729 homologue to UP|Q8W590 (Q8W590) At2g32080/F22D22.17, par... 42 2e-04
TC7812 UP|Q9LKJ6 (Q9LKJ6) Water-selective transport intrinsic me... 42 2e-04
TC14555 similar to UP|Q43558 (Q43558) Proline rich protein precu... 42 3e-04
TC17401 41 3e-04
TC15253 weakly similar to UP|Q9ZT16 (Q9ZT16) Arabinogalactan-pro... 41 3e-04
TC10062 similar to BAD08700 (BAD08700) Cold shock domain protein... 41 3e-04
TC7994 similar to UP|Q8RU73 (Q8RU73) Ribose-5-phosphate isomeras... 41 4e-04
>BP071294
Length = 337
Score = 99.4 bits (246), Expect = 1e-21
Identities = 51/103 (49%), Positives = 72/103 (69%), Gaps = 4/103 (3%)
Frame = +3
Query: 41 PPSEPKLSATPDANVIL--VPSHSRWFSWDSIHQCEVRHLPEFFD--SSSKSPRVYKYYR 96
P S P + ++ + L +PS S+WF+WD IH+ E L EFFD S S++P+VYK YR
Sbjct: 27 PNSNPGRTDDSESELELYTIPSSSKWFAWDEIHETERTALKEFFDGTSISRTPKVYKEYR 206
Query: 97 NSIIKYFRYNPNRKITFTDVRKMLVGDVGSIRRVFEFLEAWGL 139
+ +I +R +P+RK+TFT+VRK LVGDV +R+VF FLE+ GL
Sbjct: 207 DFVINKYREDPSRKLTFTEVRKSLVGDVTLLRKVFLFLESCGL 335
>AV427333
Length = 387
Score = 46.2 bits (108), Expect = 1e-05
Identities = 23/52 (44%), Positives = 26/52 (49%), Gaps = 2/52 (3%)
Frame = +3
Query: 5 SPTTATEPPPSSSAGTPPPP--LPPPPLHQPQPAKPDAPPSEPKLSATPDAN 54
SP ++ PPPSS TPPPP PPP H P P P P L +P N
Sbjct: 219 SPPPSSPPPPSSHPFTPPPPHVRPPPSPHHPITPPPHVRPPPPPLPPSPSPN 374
Score = 34.7 bits (78), Expect = 0.032
Identities = 18/51 (35%), Positives = 21/51 (40%), Gaps = 1/51 (1%)
Frame = +3
Query: 6 PTTATEPPPSSSAGTPPPPLPPPPLHQPQPAKPDA-PPSEPKLSATPDANV 55
P+ + PPP PP PPP H P P PP P TP +V
Sbjct: 180 PSHSFAPPPRGHPSPPPSSPPPPSSHPFTPPPPHVRPPPSPHHPITPPPHV 332
Score = 31.2 bits (69), Expect = 0.35
Identities = 17/41 (41%), Positives = 17/41 (41%), Gaps = 8/41 (19%)
Frame = +3
Query: 13 PPSSSAGTPPPPL-----PPPPLHQ---PQPAKPDAPPSEP 45
PPS PP P PPPP H P P PPS P
Sbjct: 117 PPSHPFNPPPTPSHYFKSPPPPSHSFAPPPRGHPSPPPSSP 239
Score = 29.3 bits (64), Expect = 1.3
Identities = 16/35 (45%), Positives = 16/35 (45%), Gaps = 4/35 (11%)
Frame = +3
Query: 15 SSSAGTPP----PPLPPPPLHQPQPAKPDAPPSEP 45
S A T P P PPPP H P P PPS P
Sbjct: 36 SKMASTQPNFYFPHFPPPPSH---PYNPPTPPSHP 131
>TC13980 similar to UP|Q9SGT0 (Q9SGT0) T6H22.18 protein (F14J16.33), partial
(12%)
Length = 565
Score = 46.2 bits (108), Expect = 1e-05
Identities = 28/65 (43%), Positives = 31/65 (47%), Gaps = 7/65 (10%)
Frame = +2
Query: 5 SPTTATEPPPSSSAGTPPPPLPP-------PPLHQPQPAKPDAPPSEPKLSATPDANVIL 57
SP T++ P SSS T PP PP PP P P P AP S P+L A P A I
Sbjct: 338 SPPTSSSPTGSSSHSTSNPPHPPPQQQPFSPPPPPPPPPSPTAPSSHPRLPAAPAAGRIS 517
Query: 58 VPSHS 62
S S
Sbjct: 518 SASKS 532
>TC8984 similar to UP|Q8LBA3 (Q8LBA3) Phosphoserine aminotransferase,
partial (25%)
Length = 563
Score = 45.4 bits (106), Expect = 2e-05
Identities = 20/40 (50%), Positives = 27/40 (67%), Gaps = 3/40 (7%)
Frame = +1
Query: 7 TTATEPPPSSSAGTPPPPLPPPPLHQPQPAKP---DAPPS 43
T ++PPP++S+ T PPP PPPP P P+ P +APPS
Sbjct: 82 TPISKPPPTTSSTTTPPPPPPPPSAPPPPSNPSPSNAPPS 201
Score = 37.4 bits (85), Expect = 0.005
Identities = 22/54 (40%), Positives = 26/54 (47%), Gaps = 3/54 (5%)
Frame = +1
Query: 3 TKSPTTATEPPPSSSAGTPPPPLPPPPLHQP---QPAKPDAPPSEPKLSATPDA 53
T S TT PPP SA PPPP P P + P P +P P + S +P A
Sbjct: 109 TSSTTTPPPPPPPPSA--PPPPSNPSPSNAPPS*SPTRPTKPNPQIGSSTSPPA 264
Score = 28.9 bits (63), Expect = 1.7
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +1
Query: 5 SPTTATEPPPSSSAGTPPPPLPPPPLHQPQPAKP 38
SPT T+P P + T PP PPP + ++P
Sbjct: 205 SPTRPTKPNPQIGSSTSPP--APPPSRRTSSSRP 300
>AV409241
Length = 282
Score = 44.3 bits (103), Expect = 4e-05
Identities = 22/47 (46%), Positives = 25/47 (52%), Gaps = 1/47 (2%)
Frame = +2
Query: 6 PTTATEPPPSSSAGTPPPPLPPPPLHQPQPAKPDAPPS-EPKLSATP 51
P +PP S TPPPP PPPP P PA PP+ P +ATP
Sbjct: 59 PHVQVQPPSHSPTKTPPPPTPPPP---PPPATVSPPPTPSPPAAATP 190
Score = 37.0 bits (84), Expect = 0.006
Identities = 19/48 (39%), Positives = 22/48 (45%)
Frame = +2
Query: 8 TATEPPPSSSAGTPPPPLPPPPLHQPQPAKPDAPPSEPKLSATPDANV 55
T T PPP TPPPP PP + P P A + LSA P +
Sbjct: 95 TKTPPPP-----TPPPPPPPATVSPPPTPSPPAAATPSPLSAKPSRKI 223
Score = 35.8 bits (81), Expect = 0.014
Identities = 18/39 (46%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = +2
Query: 3 TKSPTTATEPPPSSSAGTPPPPLPPPP---LHQPQPAKP 38
TK+P T PPP A PPP P PP P AKP
Sbjct: 95 TKTPPPPTPPPPPPPATVSPPPTPSPPAAATPSPLSAKP 211
>TC14279 similar to UP|Q09085 (Q09085) Hydroxyproline-rich glycoprotein
(HRGP) (Fragment), partial (57%)
Length = 941
Score = 43.5 bits (101), Expect = 7e-05
Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +1
Query: 6 PTTATEPPPSSSAGTPPP-PLPPPPLHQPQPAKPDAPPSEPKLSATPDANVILVP 59
P T++ PPP PPP P PPPP H P P P+ + +P V L P
Sbjct: 343 PPTSSPPPPYHYVSPPPPSPSPPPPYHYASPPPPSPSPAPTYIYKSPPPPVKLPP 507
Score = 38.5 bits (88), Expect = 0.002
Identities = 20/51 (39%), Positives = 25/51 (48%), Gaps = 8/51 (15%)
Frame = +1
Query: 9 ATEPPPSSSAG------TPPPP--LPPPPLHQPQPAKPDAPPSEPKLSATP 51
A+ PPPS S +PPPP LPPPP H P P P+ + +P
Sbjct: 427 ASPPPPSPSPAPTYIYKSPPPPVKLPPPPYHYTSPPPPSPSPAPTYIYKSP 579
Score = 36.6 bits (83), Expect = 0.008
Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Frame = +1
Query: 6 PTTATEPPPSSSAGTPPP-PLPPPPLHQPQPAKPDAPPSEPKLSATP 51
P + + PPP PPP P PPPP + P P P P +P
Sbjct: 151 PPSHSPPPPYYYKSPPPPSPSPPPPYYYKSPPPPSPSPPPPYYYKSP 291
Score = 36.2 bits (82), Expect = 0.011
Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Frame = +1
Query: 6 PTTATEPPPSSSAGTPPPPL--PPPPLHQPQPAKPDAPPSEPKLSATP 51
P + PPP +PPPP PPPP + P P P P +P
Sbjct: 100 PPPSPSPPPPYYYQSPPPPSHSPPPPYYYKSPPPPSPSPPPPYYYKSP 243
Score = 36.2 bits (82), Expect = 0.011
Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Frame = +1
Query: 6 PTTATEPPPSSSAGTPPP-PLPPPPLHQPQPAKPDAPPSEPKLSATP 51
P + + PPP PPP P PPPP + P P P P +P
Sbjct: 199 PPSPSPPPPYYYKSPPPPSPSPPPPYYYKSPPPPSPIPHPPYYYKSP 339
Score = 35.0 bits (79), Expect = 0.024
Identities = 18/48 (37%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Frame = +1
Query: 6 PTTATEPPPSSSAGTPPPPL--PPPPLHQPQPAKPDAPPSEPKLSATP 51
P + P P +PPPP PPPP H P P P P A+P
Sbjct: 292 PPPSPIPHPPYYYKSPPPPTSSPPPPYHYVSPPPPSPSPPPPYHYASP 435
Score = 35.0 bits (79), Expect = 0.024
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +1
Query: 6 PTTATEPPPSSSAGTPPP-PLPPPPLHQPQPAKPDAPPSEPKLSATP 51
P + + PPP PPP P+P PP + P P + P P +P
Sbjct: 247 PPSPSPPPPYYYKSPPPPSPIPHPPYYYKSPPPPTSSPPPPYHYVSP 387
Score = 34.3 bits (77), Expect = 0.041
Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Frame = +1
Query: 12 PPPSSSAGTPPP-PLPPPPLHQPQPAKPDAPPSEPKLSATP 51
PPP PPP P PPPP + P P P P +P
Sbjct: 73 PPPYYYKSPPPPSPSPPPPYYYQSPPPPSHSPPPPYYYKSP 195
Score = 34.3 bits (77), Expect = 0.041
Identities = 19/44 (43%), Positives = 20/44 (45%), Gaps = 4/44 (9%)
Frame = +1
Query: 12 PPPSSSAGTPPPPL----PPPPLHQPQPAKPDAPPSEPKLSATP 51
PPP S +PPPP PPPP H P P P P S P
Sbjct: 97 PPPPSP--SPPPPYYYQSPPPPSHSPPPPYYYKSPPPPSPSPPP 222
Score = 31.2 bits (69), Expect = 0.35
Identities = 20/55 (36%), Positives = 23/55 (41%), Gaps = 4/55 (7%)
Frame = +1
Query: 12 PPPSSSAGTPPPPL----PPPPLHQPQPAKPDAPPSEPKLSATPDANVILVPSHS 62
PPP S +PPPP PPPP P P P P S P + + P S
Sbjct: 241 PPPPSP--SPPPPYYYKSPPPPSPIPHPPYYYKSPPPPTSSPPPPYHYVSPPPPS 399
Score = 31.2 bits (69), Expect = 0.35
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
Frame = +1
Query: 6 PTTATEPPPSSSAGTPPPPLP---PPPLHQ-PQPAKPDAPP 42
P + PPP +PPPP P PP ++ P P P PP
Sbjct: 148 PPPSHSPPPPYYYKSPPPPSPSPPPPYYYKSPPPPSPSPPP 270
Score = 29.6 bits (65), Expect = 1.0
Identities = 17/51 (33%), Positives = 20/51 (38%), Gaps = 9/51 (17%)
Frame = +1
Query: 21 PPPPLP---------PPPLHQPQPAKPDAPPSEPKLSATPDANVILVPSHS 62
PPPP+P PPP + P P P P +P PSHS
Sbjct: 28 PPPPVPKPYYYKSPPPPPYYYKSPPPPSPSPPPPYYYQSPPP-----PSHS 165
Score = 29.3 bits (64), Expect = 1.3
Identities = 18/52 (34%), Positives = 19/52 (35%), Gaps = 4/52 (7%)
Frame = +1
Query: 12 PPPSSSAGTPPPPL----PPPPLHQPQPAKPDAPPSEPKLSATPDANVILVP 59
PPP PPPP PPPP P P P P S P + P
Sbjct: 481 PPPPVK--LPPPPYHYTSPPPPSPSPAPTYIYKSPPPPTKSPPPPVYIYASP 630
Score = 28.5 bits (62), Expect = 2.3
Identities = 16/52 (30%), Positives = 23/52 (43%), Gaps = 4/52 (7%)
Frame = +1
Query: 4 KSPTTATEPPPSSSAGTPPPPLPPPP----LHQPQPAKPDAPPSEPKLSATP 51
KSP + PP T PPP P P +++ P +PP + A+P
Sbjct: 475 KSPPPPVKLPPPPYHYTSPPPPSPSPAPTYIYKSPPPPTKSPPPPVYIYASP 630
Score = 28.1 bits (61), Expect = 3.0
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = +1
Query: 3 TKSPTTATEPPPSSSAGTPPPPL--PPPPLH 31
T P + P P+ +PPPP PPPP++
Sbjct: 523 TSPPPPSPSPAPTYIYKSPPPPTKSPPPPVY 615
Score = 27.3 bits (59), Expect = 5.0
Identities = 18/50 (36%), Positives = 19/50 (38%), Gaps = 4/50 (8%)
Frame = +1
Query: 6 PTTATEPPPSSSAGTPPPPL----PPPPLHQPQPAKPDAPPSEPKLSATP 51
P P P PPPP PPPP P P P S P S +P
Sbjct: 25 PPPPPVPKPYYYKSPPPPPYYYKSPPPP--SPSPPPPYYYQSPPPPSHSP 168
>TC8682 similar to UP|HPPD_SOLSC (Q9ARF9) 4-hydroxyphenylpyruvate
dioxygenase (4HPPD) (HPD) (HPPDase) , partial (29%)
Length = 576
Score = 43.1 bits (100), Expect = 9e-05
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = +1
Query: 7 TTATEPPPSSSAGTPPPPLPPPPLHQPQPAKPDAPPSEPKLSATP 51
T+A+ PP + +P PP PP PL P PA P PP+ + +P
Sbjct: 394 TSASSSPPHTLPKSPSPPPPPSPLSPPPPASPSPPPTASPSAPSP 528
Score = 36.6 bits (83), Expect = 0.008
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +1
Query: 2 ATKSPTTATEPPPSSSAGTPPP-PLPPPPLHQPQPAKPDAPPSEPKLSATP 51
AT + ++ P S + PPP PL PPP P P P A PS P S +P
Sbjct: 391 ATSASSSPPHTLPKSPSPPPPPSPLSPPPPASPSP-PPTASPSAPSPSKSP 540
Score = 35.8 bits (81), Expect = 0.014
Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 10/48 (20%)
Frame = +1
Query: 6 PTTATEPPPSSSAGTPPP--PLPPP--------PLHQPQPAKPDAPPS 43
P + + PPP S PPP P PPP P P P+KP P S
Sbjct: 427 PKSPSPPPPPSPLSPPPPASPSPPPTASPSAPSPSKSPTPSKPSPPQS 570
Score = 35.4 bits (80), Expect = 0.018
Identities = 22/48 (45%), Positives = 24/48 (49%)
Frame = +1
Query: 4 KSPTTATEPPPSSSAGTPPPPLPPPPLHQPQPAKPDAPPSEPKLSATP 51
KSP+ PPP S +PPPP P P P A P AP P S TP
Sbjct: 430 KSPS----PPPPPSPLSPPPPASPSP---PPTASPSAP--SPSKSPTP 546
>CN825698
Length = 704
Score = 43.1 bits (100), Expect = 9e-05
Identities = 17/31 (54%), Positives = 20/31 (63%)
Frame = +1
Query: 12 PPPSSSAGTPPPPLPPPPLHQPQPAKPDAPP 42
P PSS++ PPPP PPPP P P+ D PP
Sbjct: 109 PSPSSASAPPPPPPPPPPPSLPPPSDSDLPP 201
Score = 40.4 bits (93), Expect = 6e-04
Identities = 20/40 (50%), Positives = 24/40 (60%)
Frame = +1
Query: 12 PPPSSSAGTPPPPLPPPPLHQPQPAKPDAPPSEPKLSATP 51
PPPS S+ + PPP PPPP P P+ P PPS+ L P
Sbjct: 103 PPPSPSSASAPPPPPPPP---PPPSLP--PPSDSDLPPPP 207
>BP030058
Length = 455
Score = 42.7 bits (99), Expect = 1e-04
Identities = 22/49 (44%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Frame = -1
Query: 7 TTATEPPPSSSAGTPPPPL----PPPPLHQPQPAKPDAPPSEPKLSATP 51
T PPP S PPPPL PPPP P P P +PP PK + P
Sbjct: 422 TCGDPPPPPPSPSPPPPPLPCPSPPPPPPSPPPPPPPSPP-PPKYPSCP 279
Score = 39.3 bits (90), Expect = 0.001
Identities = 20/59 (33%), Positives = 25/59 (41%)
Frame = -1
Query: 5 SPTTATEPPPSSSAGTPPPPLPPPPLHQPQPAKPDAPPSEPKLSATPDANVILVPSHSR 63
SP+ P P S PPP PPPP P P K + P + P +I VP +
Sbjct: 392 SPSPPPPPLPCPSPPPPPPSPPPPPPPSPPPPKYPSCPQNCNPLSPPPPRIIYVPGQPK 216
Score = 36.2 bits (82), Expect = 0.011
Identities = 17/36 (47%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
Frame = -1
Query: 13 PPSSSAGTPPPPLP---PPPLHQPQPAKPDAPPSEP 45
P + G PPPP P PPP P P+ P PPS P
Sbjct: 434 PCGDTCGDPPPPPPSPSPPPPPLPCPSPPPPPPSPP 327
>BI420016
Length = 559
Score = 42.4 bits (98), Expect = 2e-04
Identities = 25/63 (39%), Positives = 28/63 (43%), Gaps = 8/63 (12%)
Frame = +2
Query: 6 PTTATEP-PPSSSAGTPPPPLPPP-------PLHQPQPAKPDAPPSEPKLSATPDANVIL 57
P A+ P PPSS TPPP P P P P P P +PP P + TP A
Sbjct: 221 PVPASTPSPPSSPTLTPPPSPPSPTPNAPLSPSSPPSPPTPPSPPPSPAPNPTPSATGST 400
Query: 58 VPS 60
PS
Sbjct: 401 TPS 409
Score = 33.1 bits (74), Expect = 0.092
Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 4/70 (5%)
Frame = +2
Query: 5 SPTTATEPPPSSSAGTPPPPL----PPPPLHQPQPAKPDAPPSEPKLSATPDANVILVPS 60
SPT PPPS + TP PL PP P P P AP P + + + L P+
Sbjct: 254 SPTLT--PPPSPPSPTPNAPLSPSSPPSPPTPPSPPPSPAPNPTPSATGSTTPSSPLTPT 427
Query: 61 HSRWFSWDSI 70
+ S S+
Sbjct: 428 SASLSSPSSL 457
Score = 29.3 bits (64), Expect = 1.3
Identities = 16/52 (30%), Positives = 20/52 (37%)
Frame = +2
Query: 2 ATKSPTTATEPPPSSSAGTPPPPLPPPPLHQPQPAKPDAPPSEPKLSATPDA 53
A P T +P + G P P P P P+ P P S TP+A
Sbjct: 149 APPEPQTLKKPTTQCTHGGNPSPKPVPASTPSPPSSPTLTPPPSPPSPTPNA 304
Score = 28.9 bits (63), Expect = 1.7
Identities = 13/31 (41%), Positives = 14/31 (44%)
Frame = +3
Query: 12 PPPSSSAGTPPPPLPPPPLHQPQPAKPDAPP 42
PPP PP L P PL P P + PP
Sbjct: 423 PPPPRCPLLPPSSLRPLPLPPPPPPRRQQPP 515
Score = 27.7 bits (60), Expect = 3.9
Identities = 16/48 (33%), Positives = 19/48 (39%), Gaps = 16/48 (33%)
Frame = +2
Query: 20 TPPPPLPPP----------------PLHQPQPAKPDAPPSEPKLSATP 51
TPPP PP P +P PA +PPS P L+ P
Sbjct: 134 TPPP*APPEPQTLKKPTTQCTHGGNPSPKPVPASTPSPPSSPTLTPPP 277
Score = 27.7 bits (60), Expect = 3.9
Identities = 22/60 (36%), Positives = 26/60 (42%), Gaps = 1/60 (1%)
Frame = +2
Query: 2 ATKSPTTATEPPPSSSAGTPPPPLPPPPLHQPQP-AKPDAPPSEPKLSATPDANVILVPS 60
A SP++ PP TPP P PP P P P A PS P TP + + PS
Sbjct: 302 APLSPSSPPSPP------TPPSP-PPSPAPNPTPSATGSTTPSSP---LTPTSASLSSPS 451
>TC14757 similar to UP|O04361 (O04361) Prohibitin, complete
Length = 1141
Score = 42.4 bits (98), Expect = 2e-04
Identities = 22/63 (34%), Positives = 31/63 (48%), Gaps = 2/63 (3%)
Frame = +1
Query: 1 MATK--SPTTATEPPPSSSAGTPPPPLPPPPLHQPQPAKPDAPPSEPKLSATPDANVILV 58
+ATK SP++ T P P S++ PPPP PP + + P + S TP A +
Sbjct: 40 VATKPQSPSSQTSPAPPSASALPPPPSTPPSTPSMEASAPSSSTDSAASSTTPSAKEPIS 219
Query: 59 PSH 61
SH
Sbjct: 220 SSH 228
Score = 27.3 bits (59), Expect = 5.0
Identities = 21/71 (29%), Positives = 30/71 (41%), Gaps = 2/71 (2%)
Frame = +1
Query: 5 SPTTATEPPPSSSAGTPPPPLPPPPLHQPQP--AKPDAPPSEPKLSATPDANVILVPSHS 62
S + + P SS++ P P PP P + P P +A+P + I V S
Sbjct: 217 SSSHGSRNPTSSTSALAPTPSPPSPAPRISRW*TSPSVFSPAPTPNASPSLSRISVWSMM 396
Query: 63 RWFSWDSIHQC 73
R FS S +C
Sbjct: 397 RRFSPRSATRC 429
>TC7822 similar to UP|Q42139 (Q42139) H+-transporting ATP synthase CHAIN9 -
like protein (AT4G32260/F10M6_100) , partial (76%)
Length = 907
Score = 42.0 bits (97), Expect = 2e-04
Identities = 21/49 (42%), Positives = 26/49 (52%), Gaps = 3/49 (6%)
Frame = -2
Query: 9 ATEPPPSSS---AGTPPPPLPPPPLHQPQPAKPDAPPSEPKLSATPDAN 54
AT+ PPS S + PPPP P + P P APPS P+ A P A+
Sbjct: 642 ATQHPPSISPPQSSAPPPPASPSSSYSTPPISPHAPPSTPRSPAPPAAS 496
Score = 30.8 bits (68), Expect = 0.46
Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Frame = -2
Query: 5 SPTTATEPPP----SSSAGTPPPPLPPPPLHQPQPAKPDA-PPSE--PKLSATP 51
SP ++ PPP SSS TPP PP PA P A PP++ + SA+P
Sbjct: 618 SPPQSSAPPPPASPSSSYSTPPISPHAPPSTPRSPAPPAASPPTKCPSRCSASP 457
Score = 27.3 bits (59), Expect = 5.0
Identities = 16/52 (30%), Positives = 21/52 (39%)
Frame = -2
Query: 12 PPPSSSAGTPPPPLPPPPLHQPQPAKPDAPPSEPKLSATPDANVILVPSHSR 63
P S + PP PP + PQ + P P S +TP + PS R
Sbjct: 675 PSVSPN*QEPPATQHPPSISPPQSSAPPPPASPSSSYSTPPISPHAPPSTPR 520
Score = 26.9 bits (58), Expect = 6.6
Identities = 17/58 (29%), Positives = 22/58 (37%), Gaps = 8/58 (13%)
Frame = +2
Query: 10 TEPPPSSSAG--------TPPPPLPPPPLHQPQPAKPDAPPSEPKLSATPDANVILVP 59
TEP PSS G TP P P+ PP P + TP+ ++P
Sbjct: 77 TEPKPSSFHGKHGYGFLKTPHSSTSHLQFPPPNTQTPNLPPKTPTQTQTPNPKSQIIP 250
>AV410227
Length = 428
Score = 42.0 bits (97), Expect = 2e-04
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = +1
Query: 3 TKSPTTATEPPPSSSAGTPPPPLPPPPLHQPQPAKPDAPPSEPKLSATPDA 53
T +PT PPS ++ PPP + PP P P+ +PP P + +P A
Sbjct: 217 TPTPTPPPSSPPSPASSPPPPSMTPPAPSTPPPSSA*SPPPPPS*AGSPPA 369
Score = 38.1 bits (87), Expect = 0.003
Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = +1
Query: 5 SPTTATEPPPSSSAGTPPPPLPPPPLHQPQPAK--PDAPPSEPKLSA 49
SPT+ P++ TPPP PP P P P P AP + P SA
Sbjct: 184 SPTSPLSTSPTTPTPTPPPSSPPSPASSPPPPSMTPPAPSTPPPSSA 324
Score = 33.5 bits (75), Expect = 0.070
Identities = 19/51 (37%), Positives = 25/51 (48%), Gaps = 1/51 (1%)
Frame = +1
Query: 2 ATKSPTTATEPPPSSSAGTPPPPLPPPPLHQPQPAKPDAPPS-EPKLSATP 51
+T S + + P S++ T P P PPP P PA PPS P +TP
Sbjct: 160 STASSSATSPTSPLSTSPTTPTPTPPPS-SPPSPASSPPPPSMTPPAPSTP 309
Score = 33.1 bits (74), Expect = 0.092
Identities = 25/63 (39%), Positives = 29/63 (45%), Gaps = 7/63 (11%)
Frame = +1
Query: 5 SPTTATEPPPS---SSAGTPPPPL---PPPPLHQPQPAKPDAPPSE-PKLSATPDANVIL 57
S + PPPS SSA +P PL P P P P+ P +P S P S TP A
Sbjct: 130 SNASPPRPPPSTASSSATSPTSPLSTSPTTPTPTPPPSSPPSPASSPPPPSMTPPAPSTP 309
Query: 58 VPS 60
PS
Sbjct: 310 PPS 318
Score = 29.3 bits (64), Expect = 1.3
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +1
Query: 2 ATKSPTTA-TEPPPSSSAGTPPPPLPPPPLHQPQPAKPDAPPSEP 45
+T P++A + PPP S AG+PP PL P A +PP P
Sbjct: 301 STPPPSSA*SPPPPPS*AGSPP---AVEPLSAPPCANSPSPPRFP 426
>TC14729 homologue to UP|Q8W590 (Q8W590) At2g32080/F22D22.17, partial (51%)
Length = 749
Score = 42.0 bits (97), Expect = 2e-04
Identities = 20/42 (47%), Positives = 23/42 (54%)
Frame = -2
Query: 16 SSAGTPPPPLPPPPLHQPQPAKPDAPPSEPKLSATPDANVIL 57
SS PPPP PPPPL P P PP P +SA P N ++
Sbjct: 319 SSTSEPPPPPPPPPLPPPPP-----PPEFPSISAAPLLNEVI 209
>TC7812 UP|Q9LKJ6 (Q9LKJ6) Water-selective transport intrinsic membrane
protein 1, complete
Length = 1149
Score = 42.0 bits (97), Expect = 2e-04
Identities = 20/49 (40%), Positives = 26/49 (52%)
Frame = +1
Query: 3 TKSPTTATEPPPSSSAGTPPPPLPPPPLHQPQPAKPDAPPSEPKLSATP 51
T SPTTA PPP+SS PP P H P + + P+ P ++TP
Sbjct: 208 TNSPTTAPPPPPASSP-------PPSPTHSPSSSPSPSAPTSPAATSTP 333
Score = 36.2 bits (82), Expect = 0.011
Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +1
Query: 2 ATKSPTTATEPPPSSSAGTPPPPLPPPPLHQPQPAKPDAPPSEPKLSA-TPDANVILVPS 60
++ SP E P ++S T PPP PP P P+ +P S P SA T A PS
Sbjct: 169 SSSSPAPVPESPTTNSPTTAPPP---PPASSPPPSPTHSPSSSPSPSAPTSPAATSTPPS 339
Query: 61 HS 62
S
Sbjct: 340 PS 345
>TC14555 similar to UP|Q43558 (Q43558) Proline rich protein precursor,
partial (43%)
Length = 1038
Score = 41.6 bits (96), Expect = 3e-04
Identities = 20/47 (42%), Positives = 23/47 (48%)
Frame = +2
Query: 5 SPTTATEPPPSSSAGTPPPPLPPPPLHQPQPAKPDAPPSEPKLSATP 51
SP PP + A TPPP PPP P PA P P + P + TP
Sbjct: 362 SPPPVQSTPPPAPASTPPPASPPP--FSPPPATPPPPAATPPPALTP 496
Score = 41.2 bits (95), Expect = 3e-04
Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +2
Query: 2 ATKSPTTATEPPPSSSAG-TPPPPLPPPPLHQPQPAKPDAPPSEP 45
+T P A+ PPP+S +PPP PPPP P PA P + P
Sbjct: 380 STPPPAPASTPPPASPPPFSPPPATPPPPAATPPPALTPVPATSP 514
Score = 40.8 bits (94), Expect = 4e-04
Identities = 26/69 (37%), Positives = 34/69 (48%), Gaps = 11/69 (15%)
Frame = +2
Query: 5 SPTTATEPPPSSSAGTP---PPPL----PPPPLHQPQPAKP----DAPPSEPKLSATPDA 53
SP A+ PPP+ S+ P PPP+ PP P P PA P P + P +ATP
Sbjct: 305 SPPPASTPPPAQSSPPPVSSPPPVQSTPPPAPASTPPPASPPPFSPPPATPPPPAATPPP 484
Query: 54 NVILVPSHS 62
+ VP+ S
Sbjct: 485 ALTPVPATS 511
Score = 40.0 bits (92), Expect = 8e-04
Identities = 19/51 (37%), Positives = 24/51 (46%), Gaps = 2/51 (3%)
Frame = +2
Query: 3 TKSPTTATEPPPSSSAGTPPPPLPPPPLHQPQPAKPDAPP--SEPKLSATP 51
T P A PP + + PP PPP P PA+ PP S P + +TP
Sbjct: 236 TPQPPAAQSSPPPAQSSPPPVQSSPPPASTPPPAQSSPPPVSSPPPVQSTP 388
Score = 38.1 bits (87), Expect = 0.003
Identities = 23/50 (46%), Positives = 24/50 (48%), Gaps = 6/50 (12%)
Frame = +2
Query: 5 SPTTATEPPPSSSAGTPPPPLPPPPLHQPQPA------KPDAPPSEPKLS 48
SP AT PPP A TPPP L P P P PA K AP P L+
Sbjct: 437 SPPPATPPPP---AATPPPALTPVPATSPAPAPAKVKSKSPAPAPAPALA 577
Score = 36.6 bits (83), Expect = 0.008
Identities = 20/48 (41%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +2
Query: 5 SPTTATEPPPSSSAGTPPPPL-PPPPLHQPQPAKPDAPPSEPKLSATP 51
+P A+ PP S TPPPP PPP P PA AP S +P
Sbjct: 407 TPPPASPPPFSPPPATPPPPAATPPPALTPVPATSPAPAPAKVKSKSP 550
Score = 34.3 bits (77), Expect = 0.041
Identities = 20/59 (33%), Positives = 25/59 (41%), Gaps = 9/59 (15%)
Frame = +2
Query: 2 ATKSPTTATEPPPSSSAGTPPPPLP------PPPLHQPQPAK---PDAPPSEPKLSATP 51
A SP A PP + PP P PPP+ P P + P AP S P ++ P
Sbjct: 254 AQSSPPPAQSSPPPVQSSPPPASTPPPAQSSPPPVSSPPPVQSTPPPAPASTPPPASPP 430
Score = 32.3 bits (72), Expect = 0.16
Identities = 17/55 (30%), Positives = 24/55 (42%), Gaps = 9/55 (16%)
Frame = +2
Query: 6 PTTATEPPPSSSA-----GTPPPPLPPPPLHQPQPAKPDAPPSE----PKLSATP 51
P + PPP+ S+ +PPP PPP P PP + P ++TP
Sbjct: 248 PAAQSSPPPAQSSPPPVQSSPPPASTPPPAQSSPPPVSSPPPVQSTPPPAPASTP 412
Score = 29.3 bits (64), Expect = 1.3
Identities = 18/54 (33%), Positives = 26/54 (47%), Gaps = 3/54 (5%)
Frame = +2
Query: 1 MATKSPTTATEPPPSSSA-GTPPPPLPPPPLHQPQPAKPDAPP--SEPKLSATP 51
+A+ + + P +S A TP P PP P PA+ PP S P ++TP
Sbjct: 167 IASVGAQSPSNSPTTSPAPPTPTTPQPPAAQSSPPPAQSSPPPVQSSPPPASTP 328
Score = 26.9 bits (58), Expect = 6.6
Identities = 14/49 (28%), Positives = 17/49 (34%)
Frame = +2
Query: 3 TKSPTTATEPPPSSSAGTPPPPLPPPPLHQPQPAKPDAPPSEPKLSATP 51
T P T+ P P+ P P P P L P P S +P
Sbjct: 491 TPVPATSPAPAPAKVKSKSPAPAPAPALAPVVSLSPSEAPGPSLSSLSP 637
>TC17401
Length = 468
Score = 41.2 bits (95), Expect = 3e-04
Identities = 25/39 (64%), Positives = 29/39 (74%)
Frame = +1
Query: 396 LEKDESDVEKAISEIIEVQVCPILNCLMVFTLVKFKNLD 434
LEKDESDVEKAISEIIEVQ+ I + LV F++LD
Sbjct: 1 LEKDESDVEKAISEIIEVQMKNIQD-----KLVHFEDLD 102
>TC15253 weakly similar to UP|Q9ZT16 (Q9ZT16) Arabinogalactan-protein
(ATAGP4) (AT5G10430/F12B17_220), partial (42%)
Length = 575
Score = 41.2 bits (95), Expect = 3e-04
Identities = 22/51 (43%), Positives = 27/51 (52%)
Frame = +3
Query: 3 TKSPTTATEPPPSSSAGTPPPPLPPPPLHQPQPAKPDAPPSEPKLSATPDA 53
T++PTT PPP +A PPP PPP P P P + P SA+P A
Sbjct: 168 TQAPTTT--PPPPPAAAPAPPPATPPPAATPAPT-TTPPAATPAPSASPPA 311
Score = 33.5 bits (75), Expect = 0.070
Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Frame = +3
Query: 2 ATKSPTT---ATEPPPSSSAGTPPPPLPPPPLHQPQPAKPDAP-PSEPKLSATPDA 53
AT +PTT A P PS+S P P P P + P AP PS P P A
Sbjct: 246 ATPAPTTTPPAATPAPSASPPAPTPTASPTGAPTPSASSPPAPIPSGPASGPGPAA 413
Score = 33.5 bits (75), Expect = 0.070
Identities = 15/39 (38%), Positives = 20/39 (50%)
Frame = +3
Query: 5 SPTTATEPPPSSSAGTPPPPLPPPPLHQPQPAKPDAPPS 43
+PT + P+ SA +PP P+P P P PA P S
Sbjct: 315 TPTASPTGAPTPSASSPPAPIPSGPASGPGPAAGPGPNS 431
Score = 32.3 bits (72), Expect = 0.16
Identities = 18/51 (35%), Positives = 23/51 (44%), Gaps = 2/51 (3%)
Frame = +3
Query: 2 ATKSPTTATEPPPSSSA--GTPPPPLPPPPLHQPQPAKPDAPPSEPKLSAT 50
A +P AT PP ++ A TPP P P P P +P P SA+
Sbjct: 207 AAPAPPPATPPPAATPAPTTTPPAATPAPSASPPAPTPTASPTGAPTPSAS 359
Score = 29.3 bits (64), Expect = 1.3
Identities = 18/51 (35%), Positives = 23/51 (44%)
Frame = +3
Query: 1 MATKSPTTATEPPPSSSAGTPPPPLPPPPLHQPQPAKPDAPPSEPKLSATP 51
+AT A P+ + T PPP PP P P PP+ P +ATP
Sbjct: 126 LATSCVAQAPGAAPTQAPTTTPPP---PPAAAPAP-----PPATPPPAATP 254
>TC10062 similar to BAD08700 (BAD08700) Cold shock domain protein 2, partial
(66%)
Length = 481
Score = 41.2 bits (95), Expect = 3e-04
Identities = 18/37 (48%), Positives = 18/37 (48%)
Frame = -1
Query: 9 ATEPPPSSSAGTPPPPLPPPPLHQPQPAKPDAPPSEP 45
A PPP PPPP PPPP P P P PP P
Sbjct: 481 APPPPPPRPPPRPPPPYPPPPP*PPLPPYPPPPPYPP 371
Score = 37.7 bits (86), Expect = 0.004
Identities = 17/37 (45%), Positives = 17/37 (45%)
Frame = -1
Query: 6 PTTATEPPPSSSAGTPPPPLPPPPLHQPQPAKPDAPP 42
P PPP PPPP PPPP P P APP
Sbjct: 391 PPPPYPPPPRPPPP*PPPPYPPPP*PPPPRPPPPAPP 281
Score = 35.4 bits (80), Expect = 0.018
Identities = 17/40 (42%), Positives = 17/40 (42%)
Frame = -1
Query: 6 PTTATEPPPSSSAGTPPPPLPPPPLHQPQPAKPDAPPSEP 45
P PPP P PPLPP P P P P PP P
Sbjct: 463 PRPPPRPPPPYPPPPP*PPLPPYPPPPPYPPPPRPPPP*P 344
Score = 34.7 bits (78), Expect = 0.032
Identities = 18/46 (39%), Positives = 20/46 (43%)
Frame = -1
Query: 6 PTTATEPPPSSSAGTPPPPLPPPPLHQPQPAKPDAPPSEPKLSATP 51
P PPP PPPP PPP P+P P PP +A P
Sbjct: 376 PPPPRPPPP*PPPPYPPPP*PPP----PRPPPPAPPPRRVPCTAWP 251
Score = 33.5 bits (75), Expect = 0.070
Identities = 17/47 (36%), Positives = 18/47 (38%), Gaps = 7/47 (14%)
Frame = -1
Query: 6 PTTATEPPPSSSAGTPPPP-------LPPPPLHQPQPAKPDAPPSEP 45
P PPP PPPP PPPP + P P P P P
Sbjct: 475 PPPPPRPPPRPPPPYPPPPP*PPLPPYPPPPPYPPPPRPPPP*PPPP 335
Score = 33.5 bits (75), Expect = 0.070
Identities = 20/56 (35%), Positives = 20/56 (35%), Gaps = 6/56 (10%)
Frame = -1
Query: 6 PTTATEPPPSSSAGTPPPPLPPPPL------HQPQPAKPDAPPSEPKLSATPDANV 55
P P P PPPP PPPP P P P PP P A P V
Sbjct: 436 PYPPPPP*PPLPPYPPPPPYPPPPRPPPP*PPPPYPPPP*PPPPRPPPPAPPPRRV 269
Score = 32.3 bits (72), Expect = 0.16
Identities = 16/37 (43%), Positives = 17/37 (45%)
Frame = -1
Query: 12 PPPSSSAGTPPPPLPPPPLHQPQPAKPDAPPSEPKLS 48
PPP PPPP PPPP P+ A P P S
Sbjct: 343 PPPYPPPP*PPPPRPPPPAPPPRRVPCTAWPLGPVTS 233
>TC7994 similar to UP|Q8RU73 (Q8RU73) Ribose-5-phosphate isomerase
precursor , partial (81%)
Length = 1355
Score = 40.8 bits (94), Expect = 4e-04
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 8/55 (14%)
Frame = +2
Query: 5 SPTTATEPPPSSSAGTP------PPPLPPPPLHQPQP--AKPDAPPSEPKLSATP 51
SP T PPP+ S P PPPLP P + P P D+PP+ P +++P
Sbjct: 290 SPPHTTMPPPTLSYAPPLPLNYAPPPLPNPSVPSPSPKTTSRDSPPTRPSTTSSP 454
Score = 34.7 bits (78), Expect = 0.032
Identities = 18/52 (34%), Positives = 24/52 (45%), Gaps = 7/52 (13%)
Frame = +2
Query: 7 TTATEPPPSSSAGTPPP-------PLPPPPLHQPQPAKPDAPPSEPKLSATP 51
TT+ + PP+ + T P P PPPP P A P + P SA+P
Sbjct: 404 TTSRDSPPTRPSTTSSPAWSSASAPAPPPPSSSPSSASFSPPANSPTSSASP 559
Score = 31.2 bits (69), Expect = 0.35
Identities = 19/62 (30%), Positives = 25/62 (39%), Gaps = 2/62 (3%)
Frame = +2
Query: 5 SPTTATEPPPSSSAGTPPPPLPPPPLHQPQPA--KPDAPPSEPKLSATPDANVILVPSHS 62
SPT++ PPPS+ P P PA P P+ LS+T + S
Sbjct: 536 SPTSSASPPPSARRSRRDPSASRSPSSTTIPASISPSTAPTRSTLSSTSSRVAAALFSGR 715
Query: 63 RW 64
RW
Sbjct: 716 RW 721
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.315 0.131 0.395
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,088,868
Number of Sequences: 28460
Number of extensions: 205482
Number of successful extensions: 12144
Number of sequences better than 10.0: 1038
Number of HSP's better than 10.0 without gapping: 4116
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8178
length of query: 434
length of database: 4,897,600
effective HSP length: 93
effective length of query: 341
effective length of database: 2,250,820
effective search space: 767529620
effective search space used: 767529620
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 57 (26.6 bits)
Lotus: description of TM0438.5