BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0437b.7
(824 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC10133 similar to UP|Q9LSS5 (Q9LSS5) Myosin heavy chain-like, p... 65 4e-11
TC14651 weakly similar to UP|Q42779 (Q42779) Alpha-carboxyltrans... 49 3e-06
TC15001 similar to UP|GLE1_YEAST (Q12315) RNA export factor GLE1... 46 2e-05
TC16890 41 9e-04
TC14777 similar to UP|Q8QNH5 (Q8QNH5) EsV-1-103, partial (4%) 36 0.028
TC11310 similar to UP|BAD11331 (BAD11331) BRI1-KD interacting pr... 35 0.048
BG662325 33 0.14
BP057729 33 0.14
TC10845 weakly similar to UP|WRK6_ARATH (Q9C519) WRKY transcript... 33 0.18
BP052292 33 0.18
TC19663 similar to UP|Q8H6S8 (Q8H6S8) Translation initiation fac... 33 0.24
TC18869 similar to UP|Q9SIR1 (Q9SIR1) At2g25320 protein, partial... 33 0.24
TC11521 similar to UP|O23144 (O23144) Proton pump interactor (AT... 32 0.53
TC11985 similar to GB|AAF40452.1|7211981|F13M7 ESTs gb|N65605, g... 31 0.70
TC10598 weakly similar to GB|AAM78036.1|21928015|AY125526 At2g01... 31 0.70
TC15487 similar to UP|O23144 (O23144) Proton pump interactor (AT... 31 0.91
TC8931 similar to GB|AAL09731.1|15982767|AY057490 At2g32240/F22D... 31 0.91
TC9039 31 0.91
TC14522 similar to UP|Q9FJ79 (Q9FJ79) DNA topoisomerase I, parti... 30 1.2
TC19060 similar to UP|Q9SXK9 (Q9SXK9) Heat shock factor, partial... 30 2.0
>TC10133 similar to UP|Q9LSS5 (Q9LSS5) Myosin heavy chain-like, partial
(34%)
Length = 1827
Score = 65.1 bits (157), Expect = 4e-11
Identities = 101/459 (22%), Positives = 194/459 (42%), Gaps = 30/459 (6%)
Frame = +1
Query: 219 LENEVSALKSENKKLK-QDILDEQAQGKFCDRLKKKCEKVVEGRNALRQAVKILEKGIEN 277
LE+++S L+ + KK++ Q IL E + + + E+++ L ++ K +
Sbjct: 55 LESQISQLQDDLKKVRDQLILTESCKKQAQQDAQDSKEQLLALSAKLEESQKQYLELCTT 234
Query: 278 LESENKKLKKDIQEEHAQRKVEIEGKLEI----SNAFAALENEVSALKSENKKLKKDILE 333
E+ +L+K +E + R+ E+E + S A A+ NE+ LK + + +
Sbjct: 235 EEARITELQKITEECNRTRQSELEASQKHLSVDSAALASAANEIQLLKVQLELVANC--- 405
Query: 334 EQAQRKVAMEGKLEISNAFAALENEVSALKSENKKLKQ-DILEEQAQGKFCDQL------ 386
E Q A +E+ N L +S +++ +L+ E QAQG + L
Sbjct: 406 ESVQTHHAESADVELLNLKQNLSETLSLVENMKNQLRNFKEFEAQAQGLVSETLLQLETA 585
Query: 387 KKKCE-------KVVEGRNALRQAVKILEKGIENLESENKKLKKDIQEEQAQRKIEIEGK 439
K+ E K V+G ++ + + LE +KL D G
Sbjct: 586 KRTVEILRGDVAKSVDGYKSIALELDQSRAKVNTLEVLVEKLNPDFINNNCNNS----GD 753
Query: 440 LEISNAFAALENEVSALKSESTKLKKDILEEQAQIKVAIEE---KLEISNAFAALENEVS 496
L + +E E+ +LKS+ +L+ + E A+IK E+ ++I NA+ +E
Sbjct: 754 LVDGHRSDHVEAEICSLKSDVGRLRSAV--ETAEIKYQEEQIRSTVQIRNAYELMEQ--- 918
Query: 497 ALKSEIAALQQKCGAGSREGNGDVEVLKAGISDTEKEVNTLKKELVEKEKIVADSERKTA 556
+KSE + + A + D+E LKA + D E E+ + + E E + + + +T+
Sbjct: 919 -IKSESGQKECEFEAELKRKKADIEELKANLMDKETELQGI---MEENENLNSKLQVRTS 1086
Query: 557 VDERKKAAAEARKLLEAAKKIAPEKAVIPEPANCCSKCDELKK----KCEKVAVGRNALR 612
+ E ++L + + S+ +E+ K K E++ + A
Sbjct: 1087CQSDHELRNEIKRLEHCVAALKADMMDKETTLQSISEENEMLKLERNKSEEIEAAKAAEH 1266
Query: 613 QAVKILEKGIENLESENKKLKKENE----VSALKSEISA 647
+A+ L ++ +ES ++K + E A SE+ A
Sbjct: 1267EALMKLGIAMQEVESSSRKAARVTEQLEAAQASNSEMEA 1383
Score = 47.0 bits (110), Expect = 1e-05
Identities = 104/494 (21%), Positives = 202/494 (40%), Gaps = 62/494 (12%)
Frame = +1
Query: 387 KKKCEKVVEGRNALRQAVKILEKGIENL---ESENKKLKKDIQEEQAQ-----RKIEIEG 438
+K+ ++ E + + Q L+K + L ES K+ ++D Q+ + Q K+E
Sbjct: 28 RKRPSRISELESQISQLQDDLKKVRDQLILTESCKKQAQQDAQDSKEQLLALSAKLEESQ 207
Query: 439 K--LEISNAFAALENEVSALKSESTKLKKDILEEQAQIKVAIEEKLEI-SNAFAALENEV 495
K LE+ A E+ + E + ++ LE A ++ L + S A A+ NE+
Sbjct: 208 KQYLELCTTEEARITELQKITEECNRTRQSELE-------ASQKHLSVDSAALASAANEI 366
Query: 496 SALKSEIAALQQKCGAGSREG-NGDVEVL--KAGISDTEKEVNTLKKELVEKEKIVADSE 552
LK ++ + + + DVE+L K +S+T V +K +L ++ A ++
Sbjct: 367 QLLKVQLELVANCESVQTHHAESADVELLNLKQNLSETLSLVENMKNQLRNFKEFEAQAQ 546
Query: 553 RKTAVDERKKAAAEARKLLE-----AAKKIAPEKAVIPEPANCCSKCDELKKKCEKVA-- 605
V E A++ +E AK + K++ E +K + L+ EK+
Sbjct: 547 G--LVSETLLQLETAKRTVEILRGDVAKSVDGYKSIALELDQSRAKVNTLEVLVEKLNPD 720
Query: 606 -VGRN---------------------ALRQAVKILEKGIENLESENKKLKKENEVSA--- 640
+ N +L+ V L +E E + ++ + + V
Sbjct: 721 FINNNCNNSGDLVDGHRSDHVEAEICSLKSDVGRLRSAVETAEIKYQEEQIRSTVQIRNA 900
Query: 641 ------LKSEISALQQKCGAGAREGNGDVEVLKAGISDTKKEVNRLKKEHVEEERIVADS 694
+KSE + + A + D+E LKA + D + E+ + +E+ E + +
Sbjct: 901 YELMEQIKSESGQKECEFEAELKRKKADIEELKANLMDKETELQGIMEEN---ENLNSKL 1071
Query: 695 ERKTAVDERKNAAAEARKLLEAPKKIAAEVEKQIAKVELRQVHLEKQVNERKMKLAFELS 754
+ +T+ E ++L + A++ + + L+ + E ++ +KL S
Sbjct: 1072QVRTSCQSDHELRNEIKRLEHCVAALKADMMDK--ETTLQSISEENEM----LKLERNKS 1233
Query: 755 KTKEATKRFEAEK-KKLLVEKINAESKIKK---------AQERSESELDKKTADMEKQQA 804
+ EA K E E KL + ES +K A + S SE++ + M K Q+
Sbjct: 1234EEIEAAKAAEHEALMKLGIAMQEVESSSRKAARVTEQLEAAQASNSEMEAELRRM-KVQS 1410
Query: 805 EEQKKLAEDKLLLL 818
++ +K AE +L
Sbjct: 1411DQWRKAAEAAAAML 1452
>TC14651 weakly similar to UP|Q42779 (Q42779) Alpha-carboxyltransferase
aCT-1 precursor , partial (22%)
Length = 1317
Score = 48.9 bits (115), Expect = 3e-06
Identities = 52/206 (25%), Positives = 103/206 (49%), Gaps = 10/206 (4%)
Frame = +1
Query: 304 LEISNAFAALENEVSALKSENKKLKKDILEEQAQR-KVAMEGKLEISNAFAALENEVSAL 362
L +++ F+ L+ EVSA S+N+ L +L+++ ++ KV E L + L+N++ L
Sbjct: 4 LGLTDRFSKLQEEVSAANSDNQ-LSDPLLKDKIEKLKVEFEQGLSAAPNHGRLQNKLDML 180
Query: 363 K--------SENKKLKQDILEEQAQGKFCDQLKKKCEKVV-EGRNALRQAVKILEKGIEN 413
K SE KK KQ++ ++ + ++K+ E + E + + L+ ++N
Sbjct: 181 KELSKVKHLSETKKQKQEVRKKFVEVISNPRIKENYEALTAEIQRVGASSSSDLDDELKN 360
Query: 414 LESENKKLKKDIQEEQAQRKIEIEGKLEISNAFAALENEVSALKSESTKLKKDILEEQAQ 473
E K + D Q A + + ++ +L + + E+EVS E +LKKD
Sbjct: 361 KIIEFNK-EVDSQLVNALKSVGLDVQLVKAEGRDSKESEVSEYVPEIEELKKD------- 516
Query: 474 IKVAIEEKLEISNAFAALENEVSALK 499
IE+++EIS + + +++++ LK
Sbjct: 517 ----IEKEIEISASSSDVKSKIEQLK 582
Score = 48.1 bits (113), Expect = 5e-06
Identities = 53/203 (26%), Positives = 101/203 (49%), Gaps = 10/203 (4%)
Frame = +1
Query: 171 SNAFAALENEVSALKSENKKLKKDILEEQAQR-KVAMEGKLEISNAFAALENEVSALK-- 227
++ F+ L+ EVSA S+N+ L +L+++ ++ KV E L + L+N++ LK
Sbjct: 13 TDRFSKLQEEVSAANSDNQ-LSDPLLKDKIEKLKVEFEQGLSAAPNHGRLQNKLDMLKEL 189
Query: 228 ------SENKKLKQDILDEQAQGKFCDRLKKKCEKVV-EGRNALRQAVKILEKGIENLES 280
SE KK KQ++ + + R+K+ E + E + + L+ ++N
Sbjct: 190 SKVKHLSETKKQKQEVRKKFVEVISNPRIKENYEALTAEIQRVGASSSSDLDDELKNKII 369
Query: 281 ENKKLKKDIQEEHAQRKVEIEGKLEISNAFAALENEVSALKSENKKLKKDILEEQAQRKV 340
E K + D Q +A + V ++ +L + + E+EVS E ++LKKDI
Sbjct: 370 EFNK-EVDSQLVNALKSVGLDVQLVKAEGRDSKESEVSEYVPEIEELKKDI--------- 519
Query: 341 AMEGKLEISNAFAALENEVSALK 363
E ++EIS + + +++++ LK
Sbjct: 520 --EKEIEISASSSDVKSKIEQLK 582
Score = 38.1 bits (87), Expect = 0.006
Identities = 43/196 (21%), Positives = 93/196 (46%), Gaps = 10/196 (5%)
Frame = +1
Query: 42 LEKGIENLESENKKLKKDIQEEQAQRKVAIEGKLEISNTFAALENEVSAL--------IS 93
L++ + S+N+ ++++ + KV E L + L+N++ L +S
Sbjct: 31 LQEEVSAANSDNQLSDPLLKDKIEKLKVEFEQGLSAAPNHGRLQNKLDMLKELSKVKHLS 210
Query: 94 ENKKLKQDILEEQAQGKICDQLKKCEKVV--EGRNALRQAVKILEKRIENLESENKKLKK 151
E KK KQ++ ++ + ++K+ + + E + + L+ ++N E K +
Sbjct: 211 ETKKQKQEVRKKFVEVISNPRIKENYEALTAEIQRVGASSSSDLDDELKNKIIEFNK-EV 387
Query: 152 DIQEEQAQRKIEIEGKLEKSNAFAALENEVSALKSENKKLKKDILEEQAQRKVAMEGKLE 211
D Q A + + ++ +L K+ + E+EVS E ++LKKDI E ++E
Sbjct: 388 DSQLVNALKSVGLDVQLVKAEGRDSKESEVSEYVPEIEELKKDI-----------EKEIE 534
Query: 212 ISNAFAALENEVSALK 227
IS + + +++++ LK
Sbjct: 535 ISASSSDVKSKIEQLK 582
>TC15001 similar to UP|GLE1_YEAST (Q12315) RNA export factor GLE1, partial
(4%)
Length = 988
Score = 46.2 bits (108), Expect = 2e-05
Identities = 44/151 (29%), Positives = 70/151 (46%)
Frame = +2
Query: 666 LKAGISDTKKEVNRLKKEHVEEERIVADSERKTAVDERKNAAAEARKLLEAPKKIAAEVE 725
LK +T K V ++ VEE +SE +R+ E RK L + E E
Sbjct: 377 LKLIEEETAKRVEEAIRKRVEES---LNSEEVQVEIQRR--LEEGRKRLIVEVAVQLEKE 541
Query: 726 KQIAKVELRQVHLEKQVNERKMKLAFELSKTKEATKRFEAEKKKLLVEKINAESKIKKAQ 785
K+ A +E R EK+ RK K + + K EA++++ L ++ E + +
Sbjct: 542 KEAALIEAR----EKEEQARKEKEDLDRMLEENRKKIEEAQRREALEQQRREEERYR--- 700
Query: 786 ERSESELDKKTADMEKQQAEEQKKLAEDKLL 816
E E + K+ A K+Q EEQ++L + KLL
Sbjct: 701 ELEEIQRQKEEAMRRKKQEEEQERLNQIKLL 793
>TC16890
Length = 965
Score = 40.8 bits (94), Expect = 9e-04
Identities = 48/210 (22%), Positives = 92/210 (42%), Gaps = 11/210 (5%)
Frame = +2
Query: 272 EKGIENLESENKKLKKDI-----------QEEHAQRKVEIEGKLEISNAFAALENEVSAL 320
EKG E E++ + KK ++++ Q V+ G L S+ + + E+S
Sbjct: 77 EKGKEREENKEENSKKKGF*LLNKMQGGGEQQNNQLVVQNSGSLSFSSQMSKEDEEMSRS 256
Query: 321 KSENKKLKKDILEEQAQRKVAMEGKLEISNAFAALENEVSALKSENKKLKQDILEEQAQG 380
N K K EE+ +RK K+E+ ++ ++ ++ E K+L
Sbjct: 257 ALSNFKAK----EEEIERK-----KMEVREK---VQLQLGRVEEETKRLAT--------- 373
Query: 381 KFCDQLKKKCEKVVEGRNALRQAVKILEKGIENLESENKKLKKDIQEEQAQRKIEIEGKL 440
++++ E + + +R+ V I+ K I+++ E K L Q+++ + K +E
Sbjct: 374 -----IREELESLAD---PMRKEVAIVRKRIDSVNKELKPLGHTCQKKEKEYKDALEAFN 529
Query: 441 EISNAFAALENEVSALKSESTKLKKDILEE 470
E + L + L SES +L+ LEE
Sbjct: 530 EKNREKVQLITRLMELVSESERLRMKKLEE 619
>TC14777 similar to UP|Q8QNH5 (Q8QNH5) EsV-1-103, partial (4%)
Length = 523
Score = 35.8 bits (81), Expect = 0.028
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Frame = +2
Query: 466 DILEEQAQIKVAIEEK---LEISNAFAALENEVSALKSEIAALQQKCGAGSREGNGDVEV 522
D Q ++K EE+ L++S+A + ++S K I LQQ ++ N DVE
Sbjct: 2 DRTRHQIKLKYQKEERQHPLQLSDAVNSRSKDLSHFKKVIERLQQASDKAEQDANEDVED 181
Query: 523 LKAGISDTEKEVNTLKKELVEKEKIVADSERKTAVD 558
L +T +EV T +K+ + E D+ K D
Sbjct: 182 L---TPETNEEVATTEKDTDDVETTKQDTNVKDQED 280
>TC11310 similar to UP|BAD11331 (BAD11331) BRI1-KD interacting protein 102
(Fragment), partial (13%)
Length = 667
Score = 35.0 bits (79), Expect = 0.048
Identities = 27/111 (24%), Positives = 51/111 (45%), Gaps = 14/111 (12%)
Frame = +1
Query: 147 KKLKKDIQEEQAQRKIEIEG---------KLEKSNAFAALENEVSALKSENKKLKKDILE 197
KK+K D+ ++ + K+E+EG K ++ N A +E A K + KK K + +
Sbjct: 19 KKVKVDVVVDEGKVKVEVEGEKKEKKKKKKKDQENGEVASSDEEKAEKEKKKKHKVKVED 198
Query: 198 -----EQAQRKVAMEGKLEISNAFAALENEVSALKSENKKLKQDILDEQAQ 243
+Q+++K + + + A + N KSE K K+ D + +
Sbjct: 199 GSPDLDQSEKKKKKKKDQDAEDNAAEISNGKEDRKSEKKHKKKKNQDAEEE 351
Score = 33.9 bits (76), Expect = 0.11
Identities = 32/115 (27%), Positives = 51/115 (43%), Gaps = 17/115 (14%)
Frame = +1
Query: 283 KKLKKDIQEEHAQRKVEIEG---------KLEISNAFAALENEVSALKSENKKLKKDILE 333
KK+K D+ + + KVE+EG K + N A +E A K + KK K + +
Sbjct: 19 KKVKVDVVVDEGKVKVEVEGEKKEKKKKKKKDQENGEVASSDEEKAEKEKKKKHKVKVED 198
Query: 334 -----EQAQRKVAMEGKLEISNAFAALENEVSALKSE---NKKLKQDILEEQAQG 380
+Q+++K + + + A + N KSE KK QD EE +G
Sbjct: 199 GSPDLDQSEKKKKKKKDQDAEDNAAEISNGKEDRKSEKKHKKKKNQDAEEE*NRG 363
>BG662325
Length = 355
Score = 33.5 bits (75), Expect = 0.14
Identities = 20/61 (32%), Positives = 34/61 (54%), Gaps = 1/61 (1%)
Frame = +1
Query: 592 SKCDELKKKCEKVAVGRNALRQAVKILEKGIENLESENKKLK-KENEVSALKSEISALQQ 650
S+ D K +KVA N+LR V+ L+ +EN++ E+ +LK KE E ++ + +
Sbjct: 94 SELDGAKDSLQKVADEENSLRSLVETLKVELENVKREHSELKEKEAETESIVGNLHVKLR 273
Query: 651 K 651
K
Sbjct: 274 K 276
>BP057729
Length = 456
Score = 33.5 bits (75), Expect = 0.14
Identities = 23/80 (28%), Positives = 38/80 (46%)
Frame = -2
Query: 479 EEKLEISNAFAALENEVSALKSEIAALQQKCGAGSREGNGDVEVLKAGISDTEKEVNTLK 538
+ L++S+A + ++S K I LQQ ++ N DVE L +T +EV T +
Sbjct: 425 QHPLQLSDAVNSRSKDLSHFKKVIERLQQASDKAEQDANEDVEDL---TPETNEEVATTE 255
Query: 539 KELVEKEKIVADSERKTAVD 558
K+ + E D+ K D
Sbjct: 254 KDTDDVETTKQDTNVKDQED 195
>TC10845 weakly similar to UP|WRK6_ARATH (Q9C519) WRKY transcription factor
6 (WRKY DNA-binding protein 6) (AtWRKY6), partial (17%)
Length = 635
Score = 33.1 bits (74), Expect = 0.18
Identities = 20/70 (28%), Positives = 34/70 (48%)
Frame = +3
Query: 163 EIEGKLEKSNAFAALENEVSALKSENKKLKKDILEEQAQRKVAMEGKLEISNAFAALENE 222
++E K K+ A L++E+ + SENKKLK E +S + AL+
Sbjct: 462 DVEDKRAKTTELAQLQSELQRMNSENKKLK--------------EMLTHVSGNYTALQMH 599
Query: 223 VSALKSENKK 232
++AL +N +
Sbjct: 600 LTALMQKNHR 629
Score = 30.0 bits (66), Expect = 1.5
Identities = 19/70 (27%), Positives = 33/70 (47%)
Frame = +3
Query: 299 EIEGKLEISNAFAALENEVSALKSENKKLKKDILEEQAQRKVAMEGKLEISNAFAALENE 358
++E K + A L++E+ + SENKKLK E +S + AL+
Sbjct: 462 DVEDKRAKTTELAQLQSELQRMNSENKKLK--------------EMLTHVSGNYTALQMH 599
Query: 359 VSALKSENKK 368
++AL +N +
Sbjct: 600 LTALMQKNHR 629
>BP052292
Length = 478
Score = 33.1 bits (74), Expect = 0.18
Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 20/120 (16%)
Frame = -1
Query: 251 KKKCEKVVEGRNALRQAVKIL--EKGIENLESENKKLKKDIQEEHAQRKVEIE------- 301
KKK K+ +GRNA+ + +I E+ L+S+ KK K I +R VE
Sbjct: 409 KKKRNKISKGRNAVYDSYRITVRERTGHILQSQGKKRNK-ISLRCRRRGVERNEAGRGDL 233
Query: 302 GKLEISNAFAALENEVSALKSENKKLKKDILE-----------EQAQRKVAMEGKLEISN 350
++E+ N+ + V+ +++ N++ K+D ++ E +RK AM K I N
Sbjct: 232 HRVEVINSMPPINI*VTQIRNRNREGKRDAIQGELEGAMRDSIEGKERKGAMREKYLIRN 53
Score = 29.6 bits (65), Expect = 2.0
Identities = 26/106 (24%), Positives = 55/106 (51%), Gaps = 9/106 (8%)
Frame = -1
Query: 387 KKKCEKVVEGRNALRQAVKIL--EKGIENLESENKKLKKDIQEEQAQRKIEIE------- 437
KKK K+ +GRNA+ + +I E+ L+S+ KK K I +R +E
Sbjct: 409 KKKRNKISKGRNAVYDSYRITVRERTGHILQSQGKKRNK-ISLRCRRRGVERNEAGRGDL 233
Query: 438 GKLEISNAFAALENEVSALKSESTKLKKDILEEQAQIKVAIEEKLE 483
++E+ N+ + V+ +++ + + K+D + Q +++ A+ + +E
Sbjct: 232 HRVEVINSMPPINI*VTQIRNRNREGKRDAI--QGELEGAMRDSIE 101
>TC19663 similar to UP|Q8H6S8 (Q8H6S8) Translation initiation factor,
partial (10%)
Length = 485
Score = 32.7 bits (73), Expect = 0.24
Identities = 39/176 (22%), Positives = 71/176 (40%)
Frame = +3
Query: 596 ELKKKCEKVAVGRNALRQAVKILEKGIENLESENKKLKKENEVSALKSEISALQQKCGAG 655
E +KK A G + V++ + +E+ ++E+K A +K
Sbjct: 63 EKEKKAAAAAAGSAPANETVEVKAEVVESKKNESKT--------------KAADKKLPKH 200
Query: 656 AREGNGDVEVLKAGISDTKKEVNRLKKEHVEEERIVADSERKTAVDERKNAAAEARKLLE 715
RE ++ ++ K+ R K+E EEE++ + E + +E + A EAR+
Sbjct: 201 VRE-------MQEALARRKEAEERKKRE--EEEKLRKEEEERRRQEELERQAEEARR--- 344
Query: 716 APKKIAAEVEKQIAKVELRQVHLEKQVNERKMKLAFELSKTKEATKRFEAEKKKLL 771
+K E EK + K K + K KE +R EA ++++L
Sbjct: 345 --RKKEREKEKLLKK---------------KQEGKLLTGKQKEEQRRLEAMRRQIL 461
>TC18869 similar to UP|Q9SIR1 (Q9SIR1) At2g25320 protein, partial (8%)
Length = 381
Score = 32.7 bits (73), Expect = 0.24
Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 7/121 (5%)
Frame = +1
Query: 52 ENKKLKKDIQEEQAQRKVAIEGKLEISNTFAALENEVSALISENKKLKQDILEE------ 105
E K+L + +QE IE +LE + ++ +S KK+ QD L +
Sbjct: 10 EKKELTEQVQE--------IESQLE---WLRSERDDEKVKLSAEKKVLQDRLHDADTQLS 156
Query: 106 QAQGKICDQLKKCEKVVEGRNALRQAVKILEKRIENLESENKKL-KKDIQEEQAQRKIEI 164
Q + + D+LKK VV+ +NAL + +K E + + E K+ +++ E+ ++ +E
Sbjct: 157 QLKSRKRDELKK---VVKEKNALAERLKNAEAARKRFDEELKRFATENVTREEIRQSLED 327
Query: 165 E 165
E
Sbjct: 328 E 330
Score = 31.2 bits (69), Expect = 0.70
Identities = 28/110 (25%), Positives = 54/110 (48%), Gaps = 17/110 (15%)
Frame = +1
Query: 345 KLEISNAFAALENEVSALKSEN----------KKLKQDILEE------QAQGKFCDQLKK 388
K E++ +E+++ L+SE KK+ QD L + Q + + D+LKK
Sbjct: 13 KKELTEQVQEIESQLEWLRSERDDEKVKLSAEKKVLQDRLHDADTQLSQLKSRKRDELKK 192
Query: 389 KCEKVVEGRNALRQAVKILEKGIENLESENKKL-KKDIQEEQAQRKIEIE 437
VV+ +NAL + +K E + + E K+ +++ E+ ++ +E E
Sbjct: 193 ----VVKEKNALAERLKNAEAARKRFDEELKRFATENVTREEIRQSLEDE 330
Score = 31.2 bits (69), Expect = 0.70
Identities = 29/112 (25%), Positives = 55/112 (48%), Gaps = 2/112 (1%)
Frame = +1
Query: 192 KKDILEEQAQRKVAMEGKLEISNAFAALENEVSALKSENKKLKQDILDEQAQ-GKFCDRL 250
+K L EQ Q +E +LE + ++E L +E K L+ + D Q + R
Sbjct: 10 EKKELTEQVQE---IESQLEWLRS--ERDDEKVKLSAEKKVLQDRLHDADTQLSQLKSRK 174
Query: 251 KKKCEKVVEGRNALRQAVKILEKGIENLESENKKL-KKDIQEEHAQRKVEIE 301
+ + +KVV+ +NAL + +K E + + E K+ +++ E ++ +E E
Sbjct: 175 RDELKKVVKEKNALAERLKNAEAARKRFDEELKRFATENVTREEIRQSLEDE 330
>TC11521 similar to UP|O23144 (O23144) Proton pump interactor
(AT4g27500/F27G19_100), partial (21%)
Length = 1005
Score = 31.6 bits (70), Expect = 0.53
Identities = 41/179 (22%), Positives = 75/179 (40%), Gaps = 16/179 (8%)
Frame = +2
Query: 384 DQLKKKCEKVVEGRNALRQAVKILEKGIENLESENKKLKKDIQEEQAQRKIEIEGKLEIS 443
DQL K+ K+ +GR + +A+K L S+ K L+ + ++ Q+ +I+ +
Sbjct: 467 DQLDKEISKINQGRFQITEALKAKRSDRAELISQIKSLRDNSRQFQSMVDEKIKEIEPLQ 646
Query: 444 NAFAALENEVSA----LKSESTKLKKDILEEQAQIK---VAIEEKLEISNAFAALE---N 493
A L +A L S +L I Q +I+ +++ E+ +I LE
Sbjct: 647 QALGKLRTATNAGRGGLCSSEEELNDVIYSFQYRIQHESISLAEEKQILRDIKQLEGTRE 826
Query: 494 EVSALKSEIAALQQKCGAGS------REGNGDVEVLKAGISDTEKEVNTLKKELVEKEK 546
+V A + A LQ G + GD++ +K ++ + +EL EK
Sbjct: 827 KVVANAAMRAKLQDSMGQKDTIQDQVKLIGGDLDGVKKERQAIRSKIKQIDEELKANEK 1003
>TC11985 similar to GB|AAF40452.1|7211981|F13M7 ESTs gb|N65605, gb|N38087,
gb|T20485, gb|T13726, gb|N38339, gb|F15440 and gb|N97201
come from this gene. {Arabidopsis thaliana;}, partial
(88%)
Length = 1334
Score = 31.2 bits (69), Expect = 0.70
Identities = 28/88 (31%), Positives = 42/88 (46%), Gaps = 1/88 (1%)
Frame = +2
Query: 496 SALKSEIAALQQKCGAGSREGNGDVEVLKAGISDTEKEVNTLKKELVEKEKIVADSERKT 555
S E+ A QQ+ +R+ + E K + EKE + KEL+E ++ D ERK
Sbjct: 446 SLTPEELKAKQQELRERARKKKEEEE--KRMEREREKERIRIGKELLEAKRNEEDKERKR 619
Query: 556 AVDERKKAAAEARKLLEAAK-KIAPEKA 582
+ RK E R+ E K K+ +KA
Sbjct: 620 WLA*RKAEKEEERRAREKIKQKLEEDKA 703
>TC10598 weakly similar to GB|AAM78036.1|21928015|AY125526
At2g01100/F23H14.7 {Arabidopsis thaliana;}, partial
(33%)
Length = 902
Score = 31.2 bits (69), Expect = 0.70
Identities = 23/115 (20%), Positives = 55/115 (47%)
Frame = +3
Query: 695 ERKTAVDERKNAAAEARKLLEAPKKIAAEVEKQIAKVELRQVHLEKQVNERKMKLAFELS 754
E+K + ERK A + + LEA K A+ E + K++ + H ++ ++ + +
Sbjct: 264 EKKKKIMERKEAPLKWEQKLEAAAKAKADAEARERKLKAAK-HKKRADSDSESDYDSD-D 437
Query: 755 KTKEATKRFEAEKKKLLVEKINAESKIKKAQERSESELDKKTADMEKQQAEEQKK 809
++K ++R + KK + E + +K +R + +++D ++E + +
Sbjct: 438 ESKRTSRRSHRKHKKRSHYDSDHEKRKEKLSKRKTKKWSSESSDFSGDESESRSE 602
>TC15487 similar to UP|O23144 (O23144) Proton pump interactor
(AT4g27500/F27G19_100), partial (16%)
Length = 1153
Score = 30.8 bits (68), Expect = 0.91
Identities = 30/112 (26%), Positives = 53/112 (46%), Gaps = 10/112 (8%)
Frame = +2
Query: 715 EAPKKIAAEVEKQIAKVELRQVHLE------KQVNERKMKLAFELSKTKEATKRFEAEKK 768
E P+K E +I +L+++ E KQ ERK KLA E + K A K + +K
Sbjct: 386 EVPRKETPPKEPEIDPAKLKEMKREEEIAKAKQAWERKKKLA-EKAAAKAALKAQKEAEK 562
Query: 769 KLLVEKINAESKI----KKAQERSESELDKKTADMEKQQAEEQKKLAEDKLL 816
KL + A+ K + A E E+ ++ D + A ++K+ ++ ++
Sbjct: 563 KLKDREKKAKKKAGIVEEPADEVVEAPQEETINDNVEAAAPVKEKVPKESVI 718
>TC8931 similar to GB|AAL09731.1|15982767|AY057490 At2g32240/F22D22.1
{Arabidopsis thaliana;} , partial (4%)
Length = 876
Score = 30.8 bits (68), Expect = 0.91
Identities = 23/73 (31%), Positives = 39/73 (52%), Gaps = 10/73 (13%)
Frame = +1
Query: 446 FAALENEVSALKSESTKLKKDILEEQAQI---KVAIEEKLE----ISNAFAALE---NEV 495
+A N+ L + +L+K++ QA I KVA +KLE + N+ LE NE+
Sbjct: 7 YAQKINDRDVLNGKVAELEKELQLSQATIANQKVAESQKLELEASLKNSLEELEIKKNEI 186
Query: 496 SALKSEIAALQQK 508
+ L+ ++ L+QK
Sbjct: 187 TLLQKQVTDLEQK 225
Score = 30.8 bits (68), Expect = 0.91
Identities = 29/119 (24%), Positives = 52/119 (43%), Gaps = 4/119 (3%)
Frame = +1
Query: 174 FAALENEVSALKSENKKLKKDILEEQA---QRKVAMEGKLEISNAFAALENEVSALKSEN 230
+A N+ L + +L+K++ QA +KVA KLE+ + E+ K+E
Sbjct: 7 YAQKINDRDVLNGKVAELEKELQLSQATIANQKVAESQKLELEASLKNSLEELEIKKNEI 186
Query: 231 KKLKQDILD-EQAQGKFCDRLKKKCEKVVEGRNALRQAVKILEKGIENLESENKKLKKD 288
L++ + D EQ D+L K E V+ ++ L + + I + K K +
Sbjct: 187 TLLQKQVTDLEQKLQLTSDKLSVKGEVGVDQKDGLEVKSRDIGSSISSPSKRKSKKKSE 363
>TC9039
Length = 1218
Score = 30.8 bits (68), Expect = 0.91
Identities = 49/213 (23%), Positives = 84/213 (39%), Gaps = 10/213 (4%)
Frame = +2
Query: 401 RQAVKILEKGIENLE----SENKKLKKDIQEEQAQRKIEIEGKLEISNAFAALENEVSAL 456
R ++ I+++GI + SE K KD E +++ K E S L+N +S
Sbjct: 320 RMSLMIIKRGIPEVFRGTISEEIKGAKDFLAE-IEKRFAKSDKAETSTL---LQNLISMK 487
Query: 457 KSESTKLKK------DILEEQAQIKVAIEEKLEISNAFAALENEVSALKSEIAALQQKCG 510
+++ +I + +K+ + + L I +L + S K ++K
Sbjct: 488 YQGKGNIREYIMGMSNIASKLKALKLELSDDLLIHLVLLSLPAQFSQFKISYNCPKEKWS 667
Query: 511 AGSREGNGDVEVLKAGISDTEKEVNTLKKELVEKEKIVADSERKTAVDERKKAAAEARKL 570
L IS +E LK+E E V+ S+ K ++K E +
Sbjct: 668 ------------LNELISFCVQEEERLKQERKESAHFVSTSKDKG----KRKKTVEPKN- 796
Query: 571 LEAAKKIAPEKAVIPEPANCCSKCDELKKKCEK 603
EAA AP+K + C+ +KKKC K
Sbjct: 797 -EAADAPAPKKQKEDDTCYFCNVSGHMKKKCTK 892
>TC14522 similar to UP|Q9FJ79 (Q9FJ79) DNA topoisomerase I, partial (12%)
Length = 635
Score = 30.4 bits (67), Expect = 1.2
Identities = 16/74 (21%), Positives = 44/74 (58%), Gaps = 2/74 (2%)
Frame = +2
Query: 135 LEKRIENLESENKKLKKDIQEEQAQR--KIEIEGKLEKSNAFAALENEVSALKSENKKLK 192
L ++++ L++ K+L+ D+ + + +GK +K+ + ALE ++S ++ +K++
Sbjct: 2 LNEKLDELQAVLKELRTDLDRARKGKPPSKSPDGKKKKNLSSEALEKKISQTHAKIEKMQ 181
Query: 193 KDILEEQAQRKVAM 206
+D+ ++ + VA+
Sbjct: 182 RDMKTKEDLKTVAL 223
>TC19060 similar to UP|Q9SXK9 (Q9SXK9) Heat shock factor, partial (58%)
Length = 660
Score = 29.6 bits (65), Expect = 2.0
Identities = 15/29 (51%), Positives = 21/29 (71%)
Frame = +1
Query: 624 NLESENKKLKKENEVSALKSEISALQQKC 652
NL SEN+KLKKENE L E++ +++C
Sbjct: 511 NLSSENEKLKKENE--TLGWELARAKKQC 591
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.305 0.124 0.307
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,007,361
Number of Sequences: 28460
Number of extensions: 69641
Number of successful extensions: 423
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 272
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 422
length of query: 824
length of database: 4,897,600
effective HSP length: 98
effective length of query: 726
effective length of database: 2,108,520
effective search space: 1530785520
effective search space used: 1530785520
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.9 bits)
S2: 59 (27.3 bits)
Lotus: description of TM0437b.7