TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0437b.10
         (101 letters)

Database: LJGI 
           28,460 sequences; 14,692,800 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

BP037350                                                               69  2e-13
BP047366                                                               64  5e-12
AV776064                                                               56  9e-10
TC18887 similar to UP|Q94KA6 (Q94KA6) bZIP transcription factor ...    49  2e-07
BP080797                                                               41  4e-05
BF177802                                                               33  0.010
TC14298 homologue to UP|Q8L5W2 (Q8L5W2) bZIP transcription facto...    28  0.19
TC15653 similar to UP|Q941L5 (Q941L5) bZIP transcription factor ...    25  1.6
TC13576 similar to UP|Q9FPI4 (Q9FPI4) AT5g16110 (AT5g16110/T21H1...    25  2.1
TC14662 similar to UP|PSA3_SPIOL (O24362) Proteasome subunit alp...    25  2.8
AU089482                                                               25  2.8
TC9762                                                                 24  3.6
AV410467                                                               24  4.7
AV766714                                                               23  8.0
BP075415                                                               23  8.0

>BP037350 
          Length = 495

 Score = 68.6 bits (166), Expect = 2e-13
 Identities = 42/78 (53%), Positives = 49/78 (61%)
 Frame = -2

Query: 9   VSNIQKHGRKMMALEDMVENTVDRRQKRMIKN*VSGASSRAVKQAYINVLERNV*SLEVE 68
           VS++Q  GRK  A EDMV  TV+RRQKRMIKN  S A SRA K AY N L   V  LE E
Sbjct: 443 VSDMQIPGRKRSAPEDMVGKTVERRQKRMIKNRESAARSRARKHAYTNEL*NKVSRLEEE 264

Query: 69  IERLMKQTAIQNLLTQIP 86
            ERL K+  ++ +L   P
Sbjct: 263 NERLRKRKELEQMLPCTP 210


>BP047366 
          Length = 535

 Score = 63.5 bits (153), Expect = 5e-12
 Identities = 38/70 (54%), Positives = 45/70 (64%)
 Frame = -3

Query: 17  RKMMALEDMVENTVDRRQKRMIKN*VSGASSRAVKQAYINVLERNV*SLEVEIERLMKQT 76
           RK +A   +VE TV+RRQKRMIKN  S A SRA KQAY   LE  V  LE E ERL +Q 
Sbjct: 530 RKRVASGIVVEKTVERRQKRMIKNRESAARSRARKQAYTQELEIKVSRLEEENERLRRQH 351

Query: 77  AIQNLLTQIP 86
            I+ +L  +P
Sbjct: 350 EIEQVLPSVP 321


>AV776064 
          Length = 418

 Score = 56.2 bits (134), Expect = 9e-10
 Identities = 31/45 (68%), Positives = 33/45 (72%)
 Frame = -1

Query: 10  SNIQKHGRKMMALEDMVENTVDRRQKRMIKN*VSGASSRAVKQAY 54
           S+ Q  GRK  A EDMVE TV+RRQKRMIKN  S A SRA KQAY
Sbjct: 418 SDTQTPGRKRSAPEDMVEKTVERRQKRMIKNRESAARSRARKQAY 284


>TC18887 similar to UP|Q94KA6 (Q94KA6) bZIP transcription factor 6, partial
           (64%)
          Length = 944

 Score = 48.5 bits (114), Expect = 2e-07
 Identities = 31/60 (51%), Positives = 38/60 (62%)
 Frame = +3

Query: 16  GRKMMALEDMVENTVDRRQKRMIKN*VSGASSRAVKQAYINVLERNV*SLEVEIERLMKQ 75
           GRK  A+E ++E    RRQ+RMIKN  S A SRA KQAY   LE+ V  L+ E E L K+
Sbjct: 747 GRKTGAVEKVIE----RRQRRMIKNRESAARSRARKQAYTMELEQEVAKLKEENEELQKK 914


>BP080797 
          Length = 498

 Score = 40.8 bits (94), Expect = 4e-05
 Identities = 30/73 (41%), Positives = 37/73 (50%)
 Frame = -2

Query: 14  KHGRKMMALEDMVENTVDRRQKRMIKN*VSGASSRAVKQAYINVLERNV*SLEVEIERLM 73
           K GRK     D  E  ++RR +R IKN  S A SRA KQAY N L   V  LE +  +L 
Sbjct: 497 KPGRKRDG-PDAYEKALERRLRRKIKNRESAARSRARKQAYHNELVSKVTRLEQDNIKLK 321

Query: 74  KQTAIQNLLTQIP 86
           K+   +  L   P
Sbjct: 320 KEKDFEQSLPPEP 282


>BF177802 
          Length = 481

 Score = 32.7 bits (73), Expect = 0.010
 Identities = 22/54 (40%), Positives = 33/54 (60%)
 Frame = +1

Query: 1   SCTSSTYDVSNIQKHGRKMMALEDMVENTVDRRQKRMIKN*VSGASSRAVKQAY 54
           S  ++++D S+    G K+ A +D V    D+R+KR++KN  S   SRA KQAY
Sbjct: 325 SSFNTSFDASS--SSGEKI-AQQDRVYAFSDQRRKRILKNRESALRSRARKQAY 477


>TC14298 homologue to UP|Q8L5W2 (Q8L5W2) bZIP transcription factor ATB2,
           partial (62%)
          Length = 1585

 Score = 28.5 bits (62), Expect = 0.19
 Identities = 20/62 (32%), Positives = 31/62 (49%)
 Frame = +3

Query: 23  EDMVENTVDRRQKRMIKN*VSGASSRAVKQAYINVLERNV*SLEVEIERLMKQTAIQNLL 82
           ED+      R++KRMI N  S   SR  KQ +++ L   V  L  E ++++      N+ 
Sbjct: 672 EDLQAVMDQRKRKRMISNRESARRSRMRKQKHLDDLASQVTQLRKENQQIITSV---NIT 842

Query: 83  TQ 84
           TQ
Sbjct: 843 TQ 848


>TC15653 similar to UP|Q941L5 (Q941L5) bZIP transcription factor BZI-4,
           partial (25%)
          Length = 511

 Score = 25.4 bits (54), Expect = 1.6
 Identities = 14/37 (37%), Positives = 20/37 (53%)
 Frame = +2

Query: 31  DRRQKRMIKN*VSGASSRAVKQAYINVLERNV*SLEV 67
           DR++KRM+ N  S   SR  KQ  +  L   +  L+V
Sbjct: 401 DRKRKRMVSNRESARRSRMRKQKQLEDLTAEMSRLQV 511


>TC13576 similar to UP|Q9FPI4 (Q9FPI4) AT5g16110 (AT5g16110/T21H19_30),
           partial (21%)
          Length = 391

 Score = 25.0 bits (53), Expect = 2.1
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = -1

Query: 58  LERNV*SLEVEIERLMKQTAIQNLLTQIPCC 88
           LE   *S+E      MKQ+ +Q LL   PCC
Sbjct: 358 LEETQ*SME------MKQSDLQTLLQNSPCC 284


>TC14662 similar to UP|PSA3_SPIOL (O24362) Proteasome subunit alpha type 3
           (20S proteasome alpha subunit G) (20S proteasome subunit
           alpha-7) (Proteasome component C8) , complete
          Length = 1110

 Score = 24.6 bits (52), Expect = 2.8
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +2

Query: 68  EIERLMKQTAIQNLLTQIPCCF 89
           EI+RL +   +  L+ Q PCCF
Sbjct: 875 EIQRLERLDFVCLLMIQCPCCF 940


>AU089482 
          Length = 442

 Score = 24.6 bits (52), Expect = 2.8
 Identities = 10/19 (52%), Positives = 13/19 (67%)
 Frame = -2

Query: 10 SNIQKHGRKMMALEDMVEN 28
          S +++HGRKM A  D  EN
Sbjct: 75 SIVERHGRKMQATRDGEEN 19


>TC9762 
          Length = 553

 Score = 24.3 bits (51), Expect = 3.6
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +1

Query: 87  CCFVHAFLTCINSH 100
           CCF H F  C  SH
Sbjct: 151 CCFCHGFCACS*SH 192


>AV410467 
          Length = 411

 Score = 23.9 bits (50), Expect = 4.7
 Identities = 9/25 (36%), Positives = 17/25 (68%)
 Frame = -3

Query: 12  IQKHGRKMMALEDMVENTVDRRQKR 36
           I+KH  + +  E+ V N++ RRQ++
Sbjct: 121 IRKHKYRTVTRENRVRNSIGRRQRQ 47


>AV766714 
          Length = 545

 Score = 23.1 bits (48), Expect = 8.0
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -2

Query: 83  TQIPCCFVHAFLTC 96
           T +P CF   FLTC
Sbjct: 235 TYLPFCFERTFLTC 194


>BP075415 
          Length = 463

 Score = 23.1 bits (48), Expect = 8.0
 Identities = 10/32 (31%), Positives = 17/32 (52%)
 Frame = -1

Query: 64  SLEVEIERLMKQTAIQNLLTQIPCCFVHAFLT 95
           S  + +ERL     + +LLT + C  +H  L+
Sbjct: 463 SSHISLERLKGYIYLHHLLTDLACVHLHYSLS 368


  Database: LJGI
    Posted date:  Jul 30, 2004 11:16 AM
  Number of letters in database: 14,692,800
  Number of sequences in database:  28,460
  
Lambda     K      H
   0.333    0.138    0.404 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,515,083
Number of Sequences: 28460
Number of extensions: 11787
Number of successful extensions: 158
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 156
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 158
length of query: 101
length of database: 4,897,600
effective HSP length: 77
effective length of query: 24
effective length of database: 2,706,180
effective search space: 64948320
effective search space used: 64948320
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.6 bits)
S2: 47 (22.7 bits)