BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0383.5
(1806 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC18710 171 1e-42
AV780705 116 3e-26
AU251850 115 8e-26
CB826728 104 8e-26
TC18198 weakly similar to UP|Q9XGZ5 (Q9XGZ5) T1N24.20 protein, p... 101 1e-21
AV411435 99 6e-21
BP060613 96 4e-20
AV767121 96 7e-20
TC19704 weakly similar to UP|Q9SZ87 (Q9SZ87) RNA-directed DNA po... 92 9e-19
AV426428 90 4e-18
AV780250 79 5e-15
AV780221 79 8e-15
CN825682 71 2e-12
CN825238 66 6e-11
TC12829 63 4e-10
BP085058 57 3e-08
AV428268 56 4e-08
TC18742 similar to UP|Q9FZG5 (Q9FZG5) T2E6.4, partial (3%) 53 5e-07
AV768875 52 1e-06
TC19933 45 8e-05
>TC18710
Length = 843
Score = 171 bits (432), Expect = 1e-42
Identities = 91/235 (38%), Positives = 130/235 (54%)
Frame = +2
Query: 876 EEEVREALKKMHPTKAHGADGTPALFFQKFWSIVGYDVTAQVLSILNDGADATHINQTLI 935
++++R + ++ G DG LF+QK +V VT +L+ L IN+TL+
Sbjct: 137 QKKLRLLFFLLETSQPRGMDGMNGLFYQKNGDVVKDSVT*AILAFLERAEIPNEINETLV 316
Query: 936 ALIPKIKKPSMAKDYRPISL*NVIFKLVTKTIANRLKSFLQDIVEETQSAFVPGRLITDN 995
LIPK+ P +RPIS ++K+++K RLK + D++ QS F+ GR I DN
Sbjct: 317 TLIPKVPHPESINQFRPISGCTFLYKVISKIFVARLKDAMPDLISPMQSGFIQGRQIQDN 496
Query: 996 AIIAHECFHYMRRKTRGVKGVMALKTDMSKAYDRVEWNFLKSTLEQMGFTQRWTNLIMNC 1055
+I E FH + R + +K DM+KAYDRVEW FL+S+L GF+ W +IM
Sbjct: 497 LLIVQEAFHAINRPGALGRNHSIIKLDMNKAYDRVEWKFLESSLLAFGFSTNWVKMIMIL 676
Query: 1056 VSTVSFQVLLNGQPCRSFKPERGLRQGDPLSPYLFILCAEVFSSMIKAKVAAGVL 1110
VS VS+ +NG P+RGLRQGDP SPYLF+ EV S +I+ G L
Sbjct: 677 VSGVSYNYKINGVVGPKLLPQRGLRQGDPFSPYLFLFTMEVLSLLIQNSFNMGNL 841
>AV780705
Length = 524
Score = 116 bits (291), Expect = 3e-26
Identities = 59/155 (38%), Positives = 91/155 (58%), Gaps = 1/155 (0%)
Frame = -2
Query: 1184 LLGVKAVEKHGKYLGLPTIVGRSKTQVFSFVRERIWKKLKGWKEKALSRSGREVLIKSIA 1243
LL + + G YLGLP I GR+K+ ++ E++ +KL+GWKE L+++G+EVLIK+I
Sbjct: 520 LLHMPIWDDPGHYLGLPAIWGRNKSHSLVWIEEKVKEKLEGWKETLLNQAGKEVLIKAII 341
Query: 1244 QAIPSYVMGLFLLPSTLCNQVERMINSFYWGGSADSR-KLNWIRWDTLATPKNMGGLGFR 1302
QAIPSY M + P T CN + ++ F+W + + K GG+GFR
Sbjct: 340 QAIPSYAMTIVHFPKTFCNSLYALVADFWWKSQGEGAVEYTGAVGTK*PLSKEKGGVGFR 161
Query: 1303 SFHSFNKALLAKQWWRLINRENSLMVQVIKARYYP 1337
+ N A LA+Q WR++ +L V+V+K+ Y+P
Sbjct: 160 DLRTQNLAFLARQAWRVLTNPEALWVRVMKSLYFP 56
>AU251850
Length = 343
Score = 115 bits (287), Expect = 8e-26
Identities = 53/95 (55%), Positives = 72/95 (75%)
Frame = +2
Query: 436 PRAMKMISWNCRGLGTPRAVGALRKLITMERPDLVFLMETRKKAFEIQKTKMPSGLVHSI 495
P AMK++SWNCRGLG+PRAV AL++L+ E P LVFLMET+ K FE +K + GL + +
Sbjct: 29 PTAMKLLSWNCRGLGSPRAVEALQRLVRKEIPQLVFLMETKLKKFETEKISLGFGLSNCL 208
Query: 496 GVDCNGEGKSRGGGLACYWSSSLDVNIISLSSNHI 530
VDC G+ K R GGLA +W++S+DV+++S S NHI
Sbjct: 209 IVDCVGDEKERKGGLAMWWNASVDVSLVSFSGNHI 313
>CB826728
Length = 509
Score = 104 bits (260), Expect(2) = 8e-26
Identities = 49/98 (50%), Positives = 60/98 (61%), Gaps = 1/98 (1%)
Frame = +1
Query: 1451 WKDSGVGQYSVKAGYRIQRSQNNTH-PATGPSGTNHSNLWKKVWKVKTLPRCNEIIWRAC 1509
W S G YS K+GY R +N + P+T P+ S +WK VW +LPRC E++WRAC
Sbjct: 214 WPGSSDGWYSSKSGYEFIRLENKSLLPSTSPAAAVPSLIWKTVWSASSLPRCKEVMWRAC 393
Query: 1510 KGVLPVRMNLKRRGMDLDTKCPCCGEEDETTTHALLTC 1547
G LPVR LKRRG+D+D P G EDE H LLTC
Sbjct: 394 AGYLPVRSALKRRGLDVDPSSPWSGLEDEAEVHVLLTC 507
Score = 31.2 bits (69), Expect(2) = 8e-26
Identities = 20/61 (32%), Positives = 30/61 (48%)
Frame = +3
Query: 1380 IWNDQWLPNSSSGRVTTPRNANEGPQRVCELILAGRGMWNESLIKATFSGYDASKILQIP 1439
I +D WLPNS+ + ++V +LI GR WNE+L+ FS + L +
Sbjct: 6 ILHDAWLPNSAPLVYCEDLFVDLQLKKVADLIENGR--WNENLVSMVFSPSTTAVFLAVS 179
Query: 1440 L 1440
L
Sbjct: 180 L 182
>TC18198 weakly similar to UP|Q9XGZ5 (Q9XGZ5) T1N24.20 protein, partial
(14%)
Length = 592
Score = 101 bits (251), Expect = 1e-21
Identities = 59/187 (31%), Positives = 95/187 (50%), Gaps = 1/187 (0%)
Frame = -3
Query: 794 GDRNTSFFHKKASQRKDRNSIARITDDRGRAWTE-EEDIEEVLTKYFEDLFKATSPDDCE 852
GD NT FFH QR+D N I +I D G W E ++ + E YF D++ ++
Sbjct: 569 GDHNTRFFHASTIQRRDFNRILKIKDAHG-IWVEGQKKVNEAAVNYFSDIYSSSPLQYLR 393
Query: 853 IVTNLVHGRITNEHKEIMEEPFTEEEVREALKKMHPTKAHGADGTPALFFQKFWSIVGYD 912
+ +T+ + + +E++EA+ M KA G DG LF+Q+ IV D
Sbjct: 392 ECLAPIPKLVTDRLNHKLCAQVSTDEIKEAVFSMGDLKAPGMDGINGLFYQQNREIVKND 213
Query: 913 VTAQVLSILNDGADATHINQTLIALIPKIKKPSMAKDYRPISL*NVIFKLVTKTIANRLK 972
V +L + G +N+TL+ LIPKI + +RPIS + I+K+++K I RLK
Sbjct: 212 VNNAILDFFDHGELPVELNETLVTLIPKIPHAEAIQQFRPISCCSFIYKVISKIIVARLK 33
Query: 973 SFLQDIV 979
+ +++
Sbjct: 32 PDMVNLI 12
>AV411435
Length = 426
Score = 99.0 bits (245), Expect = 6e-21
Identities = 51/141 (36%), Positives = 70/141 (49%), Gaps = 1/141 (0%)
Frame = +3
Query: 1435 ILQIPLRGTHAKDQLIWKDSGVGQYSVKAGYR-IQRSQNNTHPATGPSGTNHSNLWKKVW 1493
I+Q P T ++D+L W G+YSVK+GYR ++ +Q N S S LW +W
Sbjct: 3 IMQTPFSITGSEDRLFWPFIPSGEYSVKSGYRAVKATQFNLSNLASSSSHPSSFLWHTIW 182
Query: 1494 KVKTLPRCNEIIWRACKGVLPVRMNLKRRGMDLDTKCPCCGEEDETTTHALLTCSSIRRL 1553
+ + +WRA +PV+ NLKRR M D CP C + E HALL C R +
Sbjct: 183 GAQVPKKVRSFLWRAANNAIPVKRNLKRRNMGRDDFCPICNKGPEDINHALLACEWTRAV 362
Query: 1554 WFASHLNLHLNEELPDNFAGW 1574
WF LN ++E F W
Sbjct: 363 WFGCPLNFVVHEVHGMLFGAW 425
>BP060613
Length = 378
Score = 96.3 bits (238), Expect = 4e-20
Identities = 42/106 (39%), Positives = 69/106 (64%)
Frame = +1
Query: 1273 WGGSADSRKLNWIRWDTLATPKNMGGLGFRSFHSFNKALLAKQWWRLINRENSLMVQVIK 1332
W S +R ++W +WD L K+ GGLGF+ F N+ALLAKQ WR+++ ++L VQ++K
Sbjct: 46 WWSSKGTRGVHWRKWDLLTELKDEGGLGFKDFEIQNQALLAKQAWRILHNPDALWVQILK 225
Query: 1333 ARYYPKSTPLEANRGTNSSYLWKSVHAAREVIQKGSIWKVGTGEKI 1378
A Y+P L+ + T +S++W S+ RE++ K W++G+GE +
Sbjct: 226 ALYFPHHDFLQTTKRTGASWVWSSLLHGRELLLKQGQWQLGSGETV 363
>AV767121
Length = 525
Score = 95.5 bits (236), Expect = 7e-20
Identities = 53/170 (31%), Positives = 84/170 (49%), Gaps = 5/170 (2%)
Frame = +2
Query: 1222 LKGWKEKALSRSGREVLIKSIAQAIPSYVMGLFLLPSTLCNQVERMINSFYWGGSADSRK 1281
L WK+K +S GR LI+S+ A+P + + F LP + R++ +F WGGS + K
Sbjct: 2 LSKWKQKTVSFGGRIFLIQSVLTALPLFFLSFFKLPIGVGKSCVRLMRNFLWGGSENENK 181
Query: 1282 LNWIRWDTLATPKNMGGLGFRSFHSFNKALLAKQWWRLINRENSLMVQVIKARYYPKSTP 1341
+ ++W + PK +GGLG + +FNKALL K WR + +SL +VI+A
Sbjct: 182 IA*VKWTDVCKPKELGGLGIKDLFTFNKALLGK*RWRYLTEPDSLWRRVIEA-------- 337
Query: 1342 LEANRGTNSSYLWKSV-----HAAREVIQKGSIWKVGTGEKIHIWNDQWL 1386
+ + + S W + A G VG G++ W++ WL
Sbjct: 338 -QPDHYSCGSSWWNDILSLCPEDADGWFSSGLKKLVGEGDQTKFWSEDWL 484
>TC19704 weakly similar to UP|Q9SZ87 (Q9SZ87) RNA-directed DNA
polymerase-like protein, partial (3%)
Length = 530
Score = 91.7 bits (226), Expect = 9e-19
Identities = 50/167 (29%), Positives = 81/167 (47%), Gaps = 7/167 (4%)
Frame = -3
Query: 699 DCRHVIHHSWPRGGR-------NITSKLGNVGANLTEWAEATFGNIQKRIKSQLGIIKRI 751
+C+ I +W N++ K N LTEW F K I ++ +
Sbjct: 528 ECKETIKKAWDNTSETASSHCSNLSGKTTNTKLALTEWHHQNFSRADKEIAELKNQLEHL 349
Query: 752 QAAEQTEENLKKGKEAEKELENLLKLEEIKWSQRSRATWLAHGDRNTSFFHKKASQRKDR 811
Q + E+ ++ K+ + L++L + EE+ WSQRSR WL GD+NT FFH QR++R
Sbjct: 348 QNYSNSGEDWQEIKQRKMRLKDLWRQEELFWSQRSRIKWLKSGDKNTKFFHASTVQRRER 169
Query: 812 NSIARITDDRGRAWTEEEDIEEVLTKYFEDLFKATSPDDCEIVTNLV 858
N I RI D +G + I + ++ D++K+T+ + N V
Sbjct: 168 NRIERIKDMQGTWVRSQLAINRDVPDFYPDIYKSTNRQNITECLNAV 28
>AV426428
Length = 413
Score = 89.7 bits (221), Expect = 4e-18
Identities = 43/122 (35%), Positives = 68/122 (55%)
Frame = +3
Query: 1490 KKVWKVKTLPRCNEIIWRACKGVLPVRMNLKRRGMDLDTKCPCCGEEDETTTHALLTCSS 1549
+K+WK + LPRC E WRAC GVLPV+ +L RG+ D CP C +T HA+L C
Sbjct: 48 RKLWKAEALPRCCETGWRACLGVLPVKASLHARGLAEDPICPRCLAAPKTADHAVLFCP* 227
Query: 1550 IRRLWFASHLNLHLNEELPDNFAGWLEQVLELPNEETMADLFNLIWVIWKRRNAWIFLW* 1609
+ +WFAS L LN+E ++ +++ + +T + +++ IW +N F +
Sbjct: 228 VHPIWFASSLGFRLNQEC--KMHEFVADFMQVAD*DTCGEFLTILYAIWTAQNELCFRYT 401
Query: 1610 TL 1611
T+
Sbjct: 402 TV 407
>AV780250
Length = 494
Score = 79.3 bits (194), Expect = 5e-15
Identities = 43/115 (37%), Positives = 59/115 (50%)
Frame = +3
Query: 1442 GTHAKDQLIWKDSGVGQYSVKAGYRIQRSQNNTHPATGPSGTNHSNLWKKVWKVKTLPRC 1501
G D L W + G+Y+ K+GY + R++ H PS + + VWK TLPRC
Sbjct: 159 GVLKNDVLAWPHTSNGEYTSKSGYAVVRNKV-VHAL--PSSSTALQVSPVVWKAPTLPRC 329
Query: 1502 NEIIWRACKGVLPVRMNLKRRGMDLDTKCPCCGEEDETTTHALLTCSSIRRLWFA 1556
E+I RA +LP R L+ RGMD+D CP C E+ LL + + WFA
Sbjct: 330 RELIGRAFLKILPTRSALRARGMDVDELCPSCETHRESPAQVLLFVPVVSKWWFA 494
>AV780221
Length = 461
Score = 78.6 bits (192), Expect = 8e-15
Identities = 43/150 (28%), Positives = 75/150 (49%), Gaps = 1/150 (0%)
Frame = +3
Query: 1238 LIKSIAQAIPSYVMGLFLLPST-LCNQVERMINSFYWGGSADSRKLNWIRWDTLATPKNM 1296
LI+S+ A+P + + F LP+ V + F+ +K+ W++W T+ PK+
Sbjct: 9 LIRSVLIALPLFHLPFFKLPTGGFYTNVNN**DPFFGREVEGGKKIAWVKWSTVCRPKDE 188
Query: 1297 GGLGFRSFHSFNKALLAKQWWRLINRENSLMVQVIKARYYPKSTPLEANRGTNSSYLWKS 1356
GGLG ++ FNKALL K WR++ + L +V+ + Y + P A+ N +
Sbjct: 189 GGLGVQNLGLFNKALLGKWRWRMLKERDGLWYKVLLIK-YKNAIPQSASSWWNDLHSTCF 365
Query: 1357 VHAAREVIQKGSIWKVGTGEKIHIWNDQWL 1386
+Q+G ++G G ++ WN+ WL
Sbjct: 366 EDGGGGWMQRGLCRRIGEGTEVKFWNENWL 455
>CN825682
Length = 626
Score = 70.9 bits (172), Expect = 2e-12
Identities = 39/96 (40%), Positives = 52/96 (53%), Gaps = 1/96 (1%)
Frame = -3
Query: 575 WLCLGDFNEVLKSSEKTGGNPINFVGAQAFQEAMDFCGLRDMGFSGFQFTW-SNMRPTPN 633
W C GDFNE+L EK G + Q F++ +D L D+ G +FTW SN+R
Sbjct: 300 WTCYGDFNEILHHQEKEGARDQDPTRIQVFRDFLDGANLMDLELKGCRFTWLSNLRNGLV 121
Query: 634 TIQERLDRALVNECWTEHWPHTHVSHLDRFNSDHNP 669
T +ERLDR LVN W +P+ L +SDH+P
Sbjct: 120 T-KERLDRVLVNWTWRLDYPNATAMALPIISSDHSP 16
>CN825238
Length = 692
Score = 65.9 bits (159), Expect = 6e-11
Identities = 38/135 (28%), Positives = 66/135 (48%), Gaps = 2/135 (1%)
Frame = +3
Query: 1410 LILAGRGMWNESLIKATFSGYDASKILQIPLRGTHAKDQLIWKDSGVGQYSVKAGY-RIQ 1468
L++ WN LI F A+ I IPL ++ +W+ S G +SV++ Y IQ
Sbjct: 297 LLIPNARRWNVQLIDQLFPKETAAVIKSIPLGWRTTRNSCLWRWSRNGAFSVRSAYYNIQ 476
Query: 1469 RSQNNTHPATGPSGTNHSNLWKKVWKVKTLPRCNEIIWRACKGVLPVRMNLKRRGMDLDT 1528
++ ++ S S WKK+W+ + +R + ++P R NL+RRG+ +
Sbjct: 477 VAKEMQTSSSAAS----SFPWKKLWRTPVPNKMKHFAYRVARNIIPCRENLQRRGIAVQN 644
Query: 1529 KCPCCGEE-DETTTH 1542
+CP C + E+ +H
Sbjct: 645 ECPTCNHQIPESMSH 689
>TC12829
Length = 448
Score = 63.2 bits (152), Expect = 4e-10
Identities = 29/61 (47%), Positives = 42/61 (68%), Gaps = 2/61 (3%)
Frame = +3
Query: 1227 EKALSRSGREVLIKSIAQAIPSYVMGLFLLPSTLCNQVERMINSFY--WGGSADSRKLNW 1284
EK L R+GREVLIKS+ +AIP+Y+M F LP ++C+Q+E M+ FY W ++ L W
Sbjct: 252 EKFLYRAGREVLIKSVTKAIPTYIMSCFALPDSICSQIEGMVGKFYLEW*CVSEEYSLAW 431
Query: 1285 I 1285
+
Sbjct: 432 M 434
Score = 28.9 bits (63), Expect = 7.6
Identities = 17/66 (25%), Positives = 33/66 (49%), Gaps = 1/66 (1%)
Frame = +1
Query: 1226 KEKALSRSGREVLIKSIAQA-IPSYVMGLFLLPSTLCNQVERMINSFYWGGSADSRKLNW 1284
+ + R G+ L + + Q+ + S + LFL+ L +++ + SF W G R ++W
Sbjct: 253 RNSCIEREGKF*LSR*LKQSQLTSCLALLFLILFVL--RLKAWLVSFIWSGDVSRRSIHW 426
Query: 1285 IRWDTL 1290
+ W L
Sbjct: 427 LGWKKL 444
>BP085058
Length = 452
Score = 56.6 bits (135), Expect = 3e-08
Identities = 33/108 (30%), Positives = 54/108 (49%)
Frame = +2
Query: 1194 GKYLGLPTIVGRSKTQVFSFVRERIWKKLKGWKEKALSRSGREVLIKSIAQAIPSYVMGL 1253
GKY+ P G + F F +R+ +L K L++ R L K + AI YVM L
Sbjct: 131 GKYMSFPIHQGHV*KEDFVFTLDRVISRLAC*KAYLLNKPARLTLAKPVLSAISMYVMQL 310
Query: 1254 FLLPSTLCNQVERMINSFYWGGSADSRKLNWIRWDTLATPKNMGGLGF 1301
LP ++C+Q+ ++ F W + + + W+T+ + K+M GL F
Sbjct: 311 NWLPQSICDQICTVVRHFVW---ENVNGIPLVAWETIQSRKSMVGLIF 445
>AV428268
Length = 429
Score = 56.2 bits (134), Expect = 4e-08
Identities = 27/96 (28%), Positives = 45/96 (46%)
Frame = +3
Query: 1459 YSVKAGYRIQRSQNNTHPATGPSGTNHSNLWKKVWKVKTLPRCNEIIWRACKGVLPVRMN 1518
YSVK+ Y G + N++K +W VK + W+ + ++N
Sbjct: 6 YSVKSAYDFLH---------GCANAQWDNIFKLLWSVKVPSNAIALSWKVLINRVQTKVN 158
Query: 1519 LKRRGMDLDTKCPCCGEEDETTTHALLTCSSIRRLW 1554
L RRG+ + CP C ++E+T H L +C + R+W
Sbjct: 159 LNRRGVVISNVCPLCSLDEESTDHLLFSCPIV*RIW 266
>TC18742 similar to UP|Q9FZG5 (Q9FZG5) T2E6.4, partial (3%)
Length = 912
Score = 52.8 bits (125), Expect = 5e-07
Identities = 41/142 (28%), Positives = 73/142 (50%), Gaps = 9/142 (6%)
Frame = -3
Query: 1110 LHGI--KITPRAPM-------ISHLFFADDSILLARATKEEAMVLHDIIKGYEAFSGQRI 1160
LH I +I+P++P ISHL FAD+ ++ + E ++++++ ++ SG
Sbjct: 436 LHEIEHRISPQSPHWRCQNEEISHLCFADNLMVFSNGYLESIAIINNVLHIFQHLSGLTP 257
Query: 1161 NFDKSELSTSRNVPSTRVHELEQLLGVKAVEKHGKYLGLPTIVGRSKTQVFSFVRERIWK 1220
N KSE+ V T +++ +LG K + + LG+P + + K + +R
Sbjct: 256 NPAKSEVFIL--VKETTKNQITNMLGYKEGKLPVR*LGVPQLTTKLKASDCKVLVDRKPS 83
Query: 1221 KLKGWKEKALSRSGREVLIKSI 1242
KL+ W ++LS +GR LI SI
Sbjct: 82 KLQHWTGRSLSYAGRLQLINSI 17
>AV768875
Length = 232
Score = 51.6 bits (122), Expect = 1e-06
Identities = 25/69 (36%), Positives = 36/69 (51%)
Frame = +1
Query: 561 WELIKKLTPDPEVPWLCLGDFNEVLKSSEKTGGNPINFVGAQAFQEAMDFCGLRDMGFSG 620
W+ + + +PWL +GD NE+L S+ GG + AQ F +D C L D+G G
Sbjct: 16 WQHLSTIRASISIPWLLIGDMNEILFPSQVRGGE-FHPNRAQRFATVLDDCNLIDLGMVG 192
Query: 621 FQFTWSNMR 629
+FTW R
Sbjct: 193 GKFTWFRKR 219
>TC19933
Length = 472
Score = 45.4 bits (106), Expect = 8e-05
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = -3
Query: 1489 WKKVWKVKTLPRCNEIIWRACKGVLPVRMNLKRRGMDLDTKCPCCGE 1535
W + K K + +W+ C +P++ NL+RRG D KCP C +
Sbjct: 143 WSSI*KAKVSNKVKHFLWKLCHNAIPLKGNLRRRGCATDGKCPICDQ 3
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.333 0.144 0.484
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,154,734
Number of Sequences: 28460
Number of extensions: 566061
Number of successful extensions: 3282
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 3202
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3269
length of query: 1806
length of database: 4,897,600
effective HSP length: 103
effective length of query: 1703
effective length of database: 1,966,220
effective search space: 3348472660
effective search space used: 3348472660
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (22.0 bits)
S2: 62 (28.5 bits)
Lotus: description of TM0383.5