BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0383.11
(277 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BP082590 160 2e-40
CB827150 72 8e-14
TC18322 similar to GB|AAP13390.1|30023714|BT006282 At5g44170 {Ar... 39 7e-04
BP066689 33 0.041
AV777838 32 0.12
BP085186 31 0.20
BP031757 31 0.20
TC8113 weakly similar to UP|O23213 (O23213) Sugar transporter li... 31 0.20
CB828423 30 0.34
AV421856 30 0.59
TC15611 homologue to UP|Q40209 (Q40209) RAB5A, partial (56%) 30 0.59
BP048314 29 0.77
AW720070 29 0.77
BI420041 29 1.0
AV426624 29 1.0
TC16562 similar to GB|AAM78073.1|21928089|AY125563 AT4g24660/F22... 29 1.0
BP034655 29 1.0
TC19949 UP|Q8H0D4 (Q8H0D4) Rac GTPase, partial (33%) 29 1.0
TC14994 similar to UP|O82469 (O82469) Protein phosphatase-2C , p... 29 1.0
AV774655 27 5.0
>BP082590
Length = 364
Score = 160 bits (405), Expect = 2e-40
Identities = 80/80 (100%), Positives = 80/80 (100%)
Frame = -1
Query: 198 VVGSDVVYSENAVVDLVETLGQLSGPNTTIFLAGELRNDAILEYFLEAAMNDFTIGRVDQ 257
VVGSDVVYSENAVVDLVETLGQLSGPNTTIFLAGELRNDAILEYFLEAAMNDFTIGRVDQ
Sbjct: 358 VVGSDVVYSENAVVDLVETLGQLSGPNTTIFLAGELRNDAILEYFLEAAMNDFTIGRVDQ 179
Query: 258 TLWHPEYRSNRVVLYVLVKK 277
TLWHPEYRSNRVVLYVLVKK
Sbjct: 178 TLWHPEYRSNRVVLYVLVKK 119
>CB827150
Length = 553
Score = 72.4 bits (176), Expect = 8e-14
Identities = 43/128 (33%), Positives = 71/128 (54%), Gaps = 5/128 (3%)
Frame = +1
Query: 47 LLWG--IQQPTLSKPNAFVSQSSLQLRLDSCGHSLSILQSPSSLGAPGVTGAVMWDSGVV 104
L WG + L + + + ++ ++ L+ GH L Q P+S G +WD+ +V
Sbjct: 148 LYWGFFLADCDLMELDRLNTPTTFEMPLEVLGHELQFSQDPNSKHL----GTTVWDASLV 315
Query: 105 LGKFLEHSVDLGTLV---LQEKKIVELGSGCGLVGCIAALLGGEVILTDLLDRLRLLRKN 161
KFLE + G L+ K+++ELG+GCG+ G ALLG +V++TD + L LL++N
Sbjct: 316 FAKFLERNCRKGRFSPAKLKGKRVIELGAGCGVSGFGMALLGCDVVVTDQKEVLPLLQRN 495
Query: 162 IETNMKHV 169
+E N+ V
Sbjct: 496 VERNVSRV 519
>TC18322 similar to GB|AAP13390.1|30023714|BT006282 At5g44170 {Arabidopsis
thaliana;}, partial (41%)
Length = 427
Score = 39.3 bits (90), Expect = 7e-04
Identities = 30/100 (30%), Positives = 45/100 (45%), Gaps = 19/100 (19%)
Frame = +3
Query: 85 PSSLGAPGVT---------GAVMWDSGVVLGKFLEHSVDLGT---------LVLQEKKIV 126
PS+ G P T G +W ++L KF E L K+ V
Sbjct: 51 PSANGVPLSTPRTTDSMHVGTSVWPCSLILVKFAERWAQTPPETPNPYTHLLNFAGKRAV 230
Query: 127 ELGSGCGLVGCIAALLG-GEVILTDLLDRLRLLRKNIETN 165
ELG GCG+ G LLG +++LTD+ + L++N++ N
Sbjct: 231 ELGCGCGVAGMGLYLLGLTDLVLTDIAPVMPALKRNLKVN 350
>BP066689
Length = 470
Score = 33.5 bits (75), Expect = 0.041
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Frame = +1
Query: 2 ENRQEEEEEEEEEEDAPPPMVKLGSYGGEVRLVVPGEES---AAEETMLLWGIQQPTL 56
++ +EE+EEE+EE+D P +K GG V ++ + + A E M+ G T+
Sbjct: 178 DDEREEQEEEDEEDDEEEPRLKYQRMGGSVPSLLAADAASCIAVAERMIALGTHAGTV 351
>AV777838
Length = 565
Score = 32.0 bits (71), Expect = 0.12
Identities = 19/43 (44%), Positives = 22/43 (50%)
Frame = -3
Query: 1 MENRQEEEEEEEEEEDAPPPMVKLGSYGGEVRLVVPGEESAAE 43
ME +EEEEEEEEEE+ GG V +V P S E
Sbjct: 275 MEEEEEEEEEEEEEEEEE-------EEGGPVMVVWPAASSREE 168
>BP085186
Length = 388
Score = 31.2 bits (69), Expect = 0.20
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -1
Query: 2 ENRQEEEEEEEEEEDAPP 19
E +EEEEEEEEEE+A P
Sbjct: 244 EEEEEEEEEEEEEEEAEP 191
Score = 28.9 bits (63), Expect = 1.0
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = -1
Query: 2 ENRQEEEEEEEEEEDAPPP 20
E +EEEEEEEEEE+ P
Sbjct: 247 EEEEEEEEEEEEEEEEAEP 191
Score = 27.7 bits (60), Expect = 2.2
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = -1
Query: 3 NRQEEEEEEEEEED 16
N +EEEEEEEEEE+
Sbjct: 262 NEEEEEEEEEEEEE 221
Score = 27.3 bits (59), Expect = 2.9
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = -1
Query: 2 ENRQEEEEEEEEEED 16
E +EEEEEEEEEE+
Sbjct: 256 EEEEEEEEEEEEEEE 212
Score = 27.3 bits (59), Expect = 2.9
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = -1
Query: 2 ENRQEEEEEEEEEED 16
E +EEEEEEEEEE+
Sbjct: 250 EEEEEEEEEEEEEEE 206
Score = 27.3 bits (59), Expect = 2.9
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = -1
Query: 2 ENRQEEEEEEEEEED 16
E +EEEEEEEEEE+
Sbjct: 253 EEEEEEEEEEEEEEE 209
Score = 27.3 bits (59), Expect = 2.9
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = -1
Query: 2 ENRQEEEEEEEEEED 16
E +EEEEEEEEEE+
Sbjct: 259 EEEEEEEEEEEEEEE 215
Score = 27.3 bits (59), Expect = 2.9
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = -1
Query: 2 ENRQEEEEEEEEEED 16
E +EEEEEEEEEE+
Sbjct: 268 EGNEEEEEEEEEEEE 224
>BP031757
Length = 507
Score = 31.2 bits (69), Expect = 0.20
Identities = 20/68 (29%), Positives = 28/68 (40%)
Frame = +2
Query: 2 ENRQEEEEEEEEEEDAPPPMVKLGSYGGEVRLVVPGEESAAEETMLLWGIQQPTLSKPNA 61
+ ++EEEEEE+EE ++P P G VR G + Q TL P
Sbjct: 239 KKKEEEEEEEQEEPESPQPPEDAKPIGDPVRFSGKGRGRKKHFNSFEFDGSQYTLEDPVL 418
Query: 62 FVSQSSLQ 69
V + Q
Sbjct: 419 LVPEDKEQ 442
>TC8113 weakly similar to UP|O23213 (O23213) Sugar transporter like
protein, partial (93%)
Length = 1865
Score = 31.2 bits (69), Expect = 0.20
Identities = 15/42 (35%), Positives = 25/42 (58%)
Frame = +2
Query: 99 WDSGVVLGKFLEHSVDLGTLVLQEKKIVELGSGCGLVGCIAA 140
+D+GV+ G L D+G Q++ + + + C LVGC+AA
Sbjct: 164 YDTGVMSGALLFIKEDIGISDTQQEVLAGILNICALVGCLAA 289
>CB828423
Length = 512
Score = 30.4 bits (67), Expect = 0.34
Identities = 15/41 (36%), Positives = 24/41 (57%)
Frame = +1
Query: 100 DSGVVLGKFLEHSVDLGTLVLQEKKIVELGSGCGLVGCIAA 140
D+GV+ G L D+G Q++ + + + C LVGC+AA
Sbjct: 370 DTGVMSGALLFIKEDIGISDTQQEVLAGILNICALVGCLAA 492
>AV421856
Length = 409
Score = 29.6 bits (65), Expect = 0.59
Identities = 16/46 (34%), Positives = 24/46 (51%)
Frame = -2
Query: 6 EEEEEEEEEEDAPPPMVKLGSYGGEVRLVVPGEESAAEETMLLWGI 51
E + +EE+E+D V GG+ PGE A EE ++L G+
Sbjct: 204 ERQGQEEKEDDGDTGKVAAAGVGGD-----PGEVVAEEEVLVLLGL 82
>TC15611 homologue to UP|Q40209 (Q40209) RAB5A, partial (56%)
Length = 463
Score = 29.6 bits (65), Expect = 0.59
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = -2
Query: 1 MENRQEEEEEEEEEED 16
M++ +EEEEEEEEEED
Sbjct: 54 MKDEEEEEEEEEEEED 7
Score = 26.6 bits (57), Expect = 5.0
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = -2
Query: 2 ENRQEEEEEEEEEED 16
+ +EEEEEEEEE+D
Sbjct: 48 DEEEEEEEEEEEEDD 4
Score = 25.8 bits (55), Expect = 8.5
Identities = 11/16 (68%), Positives = 13/16 (80%)
Frame = -2
Query: 1 MENRQEEEEEEEEEED 16
M +EEEEEEEEEE+
Sbjct: 57 MMKDEEEEEEEEEEEE 10
>BP048314
Length = 394
Score = 29.3 bits (64), Expect = 0.77
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +1
Query: 2 ENRQEEEEEEEEEEDAPPPMVK 23
E +EEEEEEEEEE+ M K
Sbjct: 187 EEEEEEEEEEEEEEEEEEAMCK 252
Score = 27.3 bits (59), Expect = 2.9
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +1
Query: 2 ENRQEEEEEEEEEED 16
E +EEEEEEEEEE+
Sbjct: 184 EEEEEEEEEEEEEEE 228
Score = 26.2 bits (56), Expect = 6.5
Identities = 10/15 (66%), Positives = 14/15 (92%)
Frame = +1
Query: 2 ENRQEEEEEEEEEED 16
++ +EEEEEEEEEE+
Sbjct: 178 KHEEEEEEEEEEEEE 222
Score = 26.2 bits (56), Expect = 6.5
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +1
Query: 2 ENRQEEEEEEEEEED 16
+ +EEEEEEEEEE+
Sbjct: 175 DKHEEEEEEEEEEEE 219
>AW720070
Length = 484
Score = 29.3 bits (64), Expect = 0.77
Identities = 22/66 (33%), Positives = 29/66 (43%)
Frame = +1
Query: 2 ENRQEEEEEEEEEEDAPPPMVKLGSYGGEVRLVVPGEESAAEETMLLWGIQQPTLSKPNA 61
++R+EEEEEEEEEE+ GE ++ E EE P S N
Sbjct: 100 DSREEEEEEEEEEEE---------EEAGEEGIITTTREEEEEEEESSSKHHCPFSSPSNF 252
Query: 62 FVSQSS 67
+S SS
Sbjct: 253 SLSSSS 270
>BI420041
Length = 452
Score = 28.9 bits (63), Expect = 1.0
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +2
Query: 2 ENRQEEEEEEEEEEDAPPPMVKLGSYGG 29
++ QEEEE E+E+ED+ P GS GG
Sbjct: 326 DDEQEEEEFEDEDEDSVPYAGDGGSGGG 409
>AV426624
Length = 422
Score = 28.9 bits (63), Expect = 1.0
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +3
Query: 2 ENRQEEEEEEEEEED 16
E +EEEEEEEEEED
Sbjct: 354 EEEEEEEEEEEEEED 398
Score = 27.3 bits (59), Expect = 2.9
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +3
Query: 2 ENRQEEEEEEEEEED 16
E +EEEEEEEEEE+
Sbjct: 351 EEEEEEEEEEEEEEE 395
Score = 27.3 bits (59), Expect = 2.9
Identities = 11/13 (84%), Positives = 13/13 (99%)
Frame = +3
Query: 4 RQEEEEEEEEEED 16
R+EEEEEEEEEE+
Sbjct: 345 REEEEEEEEEEEE 383
Score = 27.3 bits (59), Expect = 2.9
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +3
Query: 2 ENRQEEEEEEEEEED 16
E +EEEEEEEEEE+
Sbjct: 348 EEEEEEEEEEEEEEE 392
Score = 26.2 bits (56), Expect = 6.5
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +3
Query: 2 ENRQEEEEEEEEEED 16
+ +EEEEEEEEEE+
Sbjct: 342 QREEEEEEEEEEEEE 386
Score = 26.2 bits (56), Expect = 6.5
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +3
Query: 2 ENRQEEEEEEEEEED 16
E +EEEEEEEEE++
Sbjct: 357 EEEEEEEEEEEEEDE 401
Score = 25.8 bits (55), Expect = 8.5
Identities = 10/14 (71%), Positives = 14/14 (99%)
Frame = +3
Query: 3 NRQEEEEEEEEEED 16
+++EEEEEEEEEE+
Sbjct: 339 SQREEEEEEEEEEE 380
>TC16562 similar to GB|AAM78073.1|21928089|AY125563 AT4g24660/F22K18_140
{Arabidopsis thaliana;}, partial (29%)
Length = 621
Score = 28.9 bits (63), Expect = 1.0
Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 8/34 (23%)
Frame = +3
Query: 1 MENRQEEEEEEEEEED--------APPPMVKLGS 26
+E +EEEEEEEEEE APP LG+
Sbjct: 147 LEEEEEEEEEEEEEEGEVEMGFTVAPPGFDSLGN 248
>BP034655
Length = 517
Score = 28.9 bits (63), Expect = 1.0
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +1
Query: 2 ENRQEEEEEEEEEED 16
E +EEEEEEEEEED
Sbjct: 178 EEEEEEEEEEEEEED 222
Score = 27.7 bits (60), Expect = 2.2
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +1
Query: 2 ENRQEEEEEEEEEED 16
E +EEEEEEE+EED
Sbjct: 187 EEEEEEEEEEEDEED 231
Score = 27.3 bits (59), Expect = 2.9
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +1
Query: 2 ENRQEEEEEEEEEED 16
E +EEEEEEEEEE+
Sbjct: 145 EEEEEEEEEEEEEEE 189
Score = 27.3 bits (59), Expect = 2.9
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +1
Query: 2 ENRQEEEEEEEEEED 16
E +EEEEEEEEEE+
Sbjct: 148 EEEEEEEEEEEEEEE 192
Score = 27.3 bits (59), Expect = 2.9
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +1
Query: 2 ENRQEEEEEEEEEED 16
E +EEEEEEEEEE+
Sbjct: 151 EEEEEEEEEEEEEEE 195
Score = 27.3 bits (59), Expect = 2.9
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +1
Query: 2 ENRQEEEEEEEEEED 16
E +EEEEEEEEEE+
Sbjct: 154 EEEEEEEEEEEEEEE 198
Score = 27.3 bits (59), Expect = 2.9
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +1
Query: 2 ENRQEEEEEEEEEED 16
E +EEEEEEEEEE+
Sbjct: 160 EEEEEEEEEEEEEEE 204
Score = 27.3 bits (59), Expect = 2.9
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +1
Query: 2 ENRQEEEEEEEEEED 16
E +EEEEEEEEEE+
Sbjct: 157 EEEEEEEEEEEEEEE 201
Score = 27.3 bits (59), Expect = 2.9
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +1
Query: 2 ENRQEEEEEEEEEED 16
E +EEEEEEEEEE+
Sbjct: 163 EEEEEEEEEEEEEEE 207
Score = 27.3 bits (59), Expect = 2.9
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +1
Query: 2 ENRQEEEEEEEEEED 16
E +EEEEEEEEEE+
Sbjct: 166 EEEEEEEEEEEEEEE 210
Score = 27.3 bits (59), Expect = 2.9
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +1
Query: 2 ENRQEEEEEEEEEED 16
E +EEEEEEEEEE+
Sbjct: 169 EEEEEEEEEEEEEEE 213
Score = 27.3 bits (59), Expect = 2.9
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +1
Query: 2 ENRQEEEEEEEEEED 16
E +EEEEEEEEEE+
Sbjct: 172 EEEEEEEEEEEEEEE 216
Score = 27.3 bits (59), Expect = 2.9
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +1
Query: 2 ENRQEEEEEEEEEED 16
E +EEEEEEEEEE+
Sbjct: 175 EEEEEEEEEEEEEEE 219
Score = 26.6 bits (57), Expect = 5.0
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +1
Query: 2 ENRQEEEEEEEEEED 16
E +EEEEEE+EE+D
Sbjct: 190 EEEEEEEEEEDEEDD 234
Score = 26.6 bits (57), Expect = 5.0
Identities = 10/15 (66%), Positives = 14/15 (92%)
Frame = +1
Query: 2 ENRQEEEEEEEEEED 16
++ +EEEEEEEEEE+
Sbjct: 139 DDEEEEEEEEEEEEE 183
Score = 26.2 bits (56), Expect = 6.5
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +1
Query: 2 ENRQEEEEEEEEEED 16
+ +EEEEEEEEEE+
Sbjct: 142 DEEEEEEEEEEEEEE 186
Score = 26.2 bits (56), Expect = 6.5
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +1
Query: 2 ENRQEEEEEEEEEED 16
E +EEEEEEEE+E+
Sbjct: 184 EEEEEEEEEEEEDEE 228
Score = 26.2 bits (56), Expect = 6.5
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +1
Query: 2 ENRQEEEEEEEEEED 16
E +EEEEEEEEE++
Sbjct: 181 EEEEEEEEEEEEEDE 225
Score = 25.8 bits (55), Expect = 8.5
Identities = 10/15 (66%), Positives = 14/15 (92%)
Frame = +1
Query: 2 ENRQEEEEEEEEEED 16
++ +EEEEEEEEEE+
Sbjct: 136 DDDEEEEEEEEEEEE 180
>TC19949 UP|Q8H0D4 (Q8H0D4) Rac GTPase, partial (33%)
Length = 549
Score = 28.9 bits (63), Expect = 1.0
Identities = 12/13 (92%), Positives = 13/13 (99%)
Frame = +3
Query: 4 RQEEEEEEEEEED 16
R+EEEEEEEEEED
Sbjct: 318 REEEEEEEEEEED 356
Score = 25.8 bits (55), Expect = 8.5
Identities = 10/14 (71%), Positives = 14/14 (99%)
Frame = +3
Query: 3 NRQEEEEEEEEEED 16
+++EEEEEEEEEE+
Sbjct: 312 SQREEEEEEEEEEE 353
>TC14994 similar to UP|O82469 (O82469) Protein phosphatase-2C , partial
(89%)
Length = 1672
Score = 28.9 bits (63), Expect = 1.0
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = +2
Query: 2 ENRQEEEEEEEEEEDA 17
E +EEEEEEEEEE+A
Sbjct: 185 EEEEEEEEEEEEEEEA 232
Score = 27.7 bits (60), Expect = 2.2
Identities = 11/16 (68%), Positives = 14/16 (86%)
Frame = +2
Query: 1 MENRQEEEEEEEEEED 16
+E +EEEEEEEEEE+
Sbjct: 176 VEEEEEEEEEEEEEEE 223
Score = 27.3 bits (59), Expect = 2.9
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +2
Query: 2 ENRQEEEEEEEEEED 16
E +EEEEEEEEEE+
Sbjct: 182 EEEEEEEEEEEEEEE 226
Score = 26.6 bits (57), Expect = 5.0
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +2
Query: 2 ENRQEEEEEEEEEEDAPPPMVKLG 25
E +EEEEEEEEEE+ K G
Sbjct: 173 EVEEEEEEEEEEEEEEEEEAEKNG 244
Score = 26.2 bits (56), Expect = 6.5
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +2
Query: 2 ENRQEEEEEEEEEED 16
E +EEEEEEEEEE+
Sbjct: 170 EEVEEEEEEEEEEEE 214
Score = 25.8 bits (55), Expect = 8.5
Identities = 11/15 (73%), Positives = 12/15 (79%)
Frame = +2
Query: 2 ENRQEEEEEEEEEED 16
E EEEEEEEEEE+
Sbjct: 167 EEEVEEEEEEEEEEE 211
>AV774655
Length = 485
Score = 26.6 bits (57), Expect = 5.0
Identities = 11/12 (91%), Positives = 12/12 (99%)
Frame = -1
Query: 4 RQEEEEEEEEEE 15
R+EEEEEEEEEE
Sbjct: 173 REEEEEEEEEEE 138
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.314 0.135 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,489,657
Number of Sequences: 28460
Number of extensions: 58518
Number of successful extensions: 1135
Number of sequences better than 10.0: 82
Number of HSP's better than 10.0 without gapping: 445
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 786
length of query: 277
length of database: 4,897,600
effective HSP length: 89
effective length of query: 188
effective length of database: 2,364,660
effective search space: 444556080
effective search space used: 444556080
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 54 (25.4 bits)
Lotus: description of TM0383.11