TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0381.8
         (460 letters)

Database: LJGI 
           28,460 sequences; 14,692,800 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC9818 similar to UP|Q7XA50 (Q7XA50) Sorbitol-like transporter, ...    30  1.1
TC8347 UP|ATPH_LOTJA (P12231) ATP synthase C chain  (Lipid-bindi...    29  1.9
BP031085                                                               28  4.2
TC11571 similar to UP|Q940U9 (Q940U9) AT5g17440/K3M16_10, partia...    27  5.4
TC15744 homologue to UP|Q00508 (Q00508) Ribosomal protein L41 (R...    27  7.1
TC9836 weakly similar to UP|Q9LXV0 (Q9LXV0) Glucosyltransferase-...    27  9.2
CN825654                                                               27  9.2
BP055630                                                               27  9.2

>TC9818 similar to UP|Q7XA50 (Q7XA50) Sorbitol-like transporter, partial
           (62%)
          Length = 1162

 Score = 29.6 bits (65), Expect = 1.1
 Identities = 15/64 (23%), Positives = 30/64 (46%)
 Frame = +2

Query: 119 GISFDFWSITICRMLVGVGEASFISLAAPFIDDNAPVAQKTAWLATFYMCIPAGTALGYV 178
           G S ++W +   R + G+G    + +A  +  + +P + +    +   + I  G  LGY+
Sbjct: 491 GFSPNYWFLMFGRFIAGIGIGYALMIAPVYTAEVSPASSRGFLTSFPEVFINGGILLGYI 670

Query: 179 YGFA 182
             FA
Sbjct: 671 SNFA 682


>TC8347 UP|ATPH_LOTJA (P12231) ATP synthase C chain  (Lipid-binding
           protein) (Subunit III) , complete
          Length = 1267

 Score = 28.9 bits (63), Expect = 1.9
 Identities = 11/43 (25%), Positives = 25/43 (57%)
 Frame = +3

Query: 240 QVYIINVLGYISYNFVIGAYSYWGPKAGYSIYHMSNPDLLFGG 282
           +++II  +G+I Y+F +  Y Y+ P   + ++   + ++L  G
Sbjct: 756 KIHIIFPVGFICYSFFLKFYYYFNPTIIFFLFEQEHKEILI*G 884


>BP031085 
          Length = 409

 Score = 27.7 bits (60), Expect = 4.2
 Identities = 12/28 (42%), Positives = 18/28 (63%)
 Frame = +2

Query: 323 FCLVAFLFKNLSGFIVFFSIGELLIFAT 350
           FCLV  L  + S  +VFF +G L +F++
Sbjct: 56  FCLVLHLILSSSSSLVFFPLGLLFLFSS 139


>TC11571 similar to UP|Q940U9 (Q940U9) AT5g17440/K3M16_10, partial (67%)
          Length = 1011

 Score = 27.3 bits (59), Expect = 5.4
 Identities = 19/54 (35%), Positives = 25/54 (46%)
 Frame = -2

Query: 295 GGLILDRMTSTISNAFKLLSGATLLGAIFCLVAFLFKNLSGFIVFFSIGELLIF 348
           G  IL R+   +    KLL G +L    FCL+     N S    F S+  LLI+
Sbjct: 914 GSCIL*RIQYWLLPGRKLLKGFSLFHCFFCLI-----NQSLLAKFLSLSHLLIY 768


>TC15744 homologue to UP|Q00508 (Q00508) Ribosomal protein L41 (Ribosomal
           protein L44), complete
          Length = 575

 Score = 26.9 bits (58), Expect = 7.1
 Identities = 9/16 (56%), Positives = 12/16 (74%)
 Frame = +2

Query: 110 VWTFAVAGCGISFDFW 125
           V+ F V+GC +S DFW
Sbjct: 422 VYVFEVSGCFVSLDFW 469


>TC9836 weakly similar to UP|Q9LXV0 (Q9LXV0) Glucosyltransferase-like
            protein, partial (55%)
          Length = 1286

 Score = 26.6 bits (57), Expect = 9.2
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +2

Query: 319  LGAIFCLVAFLFKNLSGFIVFFSIGELLI 347
            + A+FC V F   N+S  ++  S+G + I
Sbjct: 1145 ISALFCFVLFFE*NISALLILMSVGFMYI 1231


>CN825654 
          Length = 580

 Score = 26.6 bits (57), Expect = 9.2
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +2

Query: 428 DLSTEDDEDQSATSLRGKMKPLLEGN 453
           +L+ ED+ED+   S  GK KP   G+
Sbjct: 101 ELTGEDEEDEQVVSFAGKKKPSKGGS 178


>BP055630 
          Length = 546

 Score = 26.6 bits (57), Expect = 9.2
 Identities = 16/42 (38%), Positives = 23/42 (54%)
 Frame = +1

Query: 336 FIVFFSIGELLIFATQAPVNYVSLRCVKPSLRPLSMAISTVS 377
           F + FS+  LLI  T AP+    L  V  S   LSM+ +++S
Sbjct: 268 FFLTFSLVSLLIAVTWAPLVERGLGSVSKSFTTLSMSATSLS 393


  Database: LJGI
    Posted date:  Jul 30, 2004 11:16 AM
  Number of letters in database: 14,692,800
  Number of sequences in database:  28,460
  
Lambda     K      H
   0.324    0.140    0.423 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,145,747
Number of Sequences: 28460
Number of extensions: 115768
Number of successful extensions: 535
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 531
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 535
length of query: 460
length of database: 4,897,600
effective HSP length: 93
effective length of query: 367
effective length of database: 2,250,820
effective search space: 826050940
effective search space used: 826050940
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 57 (26.6 bits)