TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0381.3
         (253 letters)

Database: LJGI 
           28,460 sequences; 14,692,800 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC18710                                                                94  3e-20
TC18742 similar to UP|Q9FZG5 (Q9FZG5) T2E6.4, partial (3%)             55  1e-08
AV780705                                                               40  3e-04
BP085058                                                               40  3e-04
TC12836 GB|CAA71302.1|2292921|LJPANC pantoate--beta-alanine liga...    33  0.047
TC14560 weakly similar to UP|Q8H6C1 (Q8H6C1) Oligomycin sensitiv...    29  0.89
AV421890                                                               28  1.5
TC18223                                                                27  2.6
TC15109 similar to UP|Q9FVE9 (Q9FVE9) Cytosolic aconitase, parti...    27  4.4
TC17798 similar to GB|AAM19907.1|20453337|AY097391 At2g42750/F7D...    26  5.8
BP060544                                                               26  7.5
TC16443                                                                26  7.5
BP084186                                                               25  9.8

>TC18710 
          Length = 843

 Score = 93.6 bits (231), Expect = 3e-20
 Identities = 52/116 (44%), Positives = 66/116 (56%), Gaps = 1/116 (0%)
 Frame = +2

Query: 5   RDNIILAQEVMHTIHTQKK-GRGLVAIKIDLEKAYDRVSWDFLRATLYDFGFPPRIVDLI 63
           +DN+++ QE  H I+     GR    IK+D+ KAYDRV W FL ++L  FGF    V +I
Sbjct: 488 QDNLLIVQEAFHAINRPGALGRNHSIIKLDMNKAYDRVEWKFLESSLLAFGFSTNWVKMI 667

Query: 64  MWGVKCPKLSILWNCSKLPSFAPQRGLRQGDPLSPYLFVLCMERLAIQIQNLVTQG 119
           M  V     +   N    P   PQRGLRQGDP SPYLF+  ME L++ IQN    G
Sbjct: 668 MILVSGVSYNYKINGVVGPKLLPQRGLRQGDPFSPYLFLFTMEVLSLLIQNSFNMG 835


>TC18742 similar to UP|Q9FZG5 (Q9FZG5) T2E6.4, partial (3%)
          Length = 912

 Score = 55.1 bits (131), Expect = 1e-08
 Identities = 35/121 (28%), Positives = 59/121 (47%)
 Frame = -3

Query: 133 ISHLFFADDVLLFCQASKEQLQLVNNTLKEFCEASGMKVNLDKSRMLFSKAVDHRRQINL 192
           ISHL FAD++++F     E + ++NN L  F   SG+  N  KS +        + QI  
Sbjct: 373 ISHLCFADNLMVFSNGYLESIAIINNVLHIFQHLSGLTPNPAKSEVFILVKETTKNQI-- 200

Query: 193 SHIAGISRASDLGKYLGIPLLKGRVTKAHFASLIGKMSSRLTSWKNNLLNRAGRVCLAKS 252
           +++ G        + LG+P L  ++  +    L+ +  S+L  W    L+ AGR+ L  S
Sbjct: 199 TNMLGYKEGKLPVR*LGVPQLTTKLKASDCKVLVDRKPSKLQHWTGRSLSYAGRLQLINS 20

Query: 253 V 253
           +
Sbjct: 19  I 17


>AV780705 
          Length = 524

 Score = 40.4 bits (93), Expect = 3e-04
 Identities = 19/51 (37%), Positives = 28/51 (54%)
 Frame = -2

Query: 203 DLGKYLGIPLLKGRVTKAHFASLIGKMSSRLTSWKNNLLNRAGRVCLAKSV 253
           D G YLG+P + GR        +  K+  +L  WK  LLN+AG+  L K++
Sbjct: 496 DPGHYLGLPAIWGRNKSHSLVWIEEKVKEKLEGWKETLLNQAGKEVLIKAI 344


>BP085058 
          Length = 452

 Score = 40.4 bits (93), Expect = 3e-04
 Identities = 22/59 (37%), Positives = 32/59 (53%)
 Frame = +2

Query: 195 IAGISRASDLGKYLGIPLLKGRVTKAHFASLIGKMSSRLTSWKNNLLNRAGRVCLAKSV 253
           I  I    ++GKY+  P+ +G V K  F   + ++ SRL   K  LLN+  R+ LAK V
Sbjct: 101 ITSIPFTDNIGKYMSFPIHQGHV*KEDFVFTLDRVISRLAC*KAYLLNKPARLTLAKPV 277


>TC12836 GB|CAA71302.1|2292921|LJPANC pantoate--beta-alanine ligase {Lotus
            corniculatus var. japonicus;} , complete
          Length = 1310

 Score = 33.1 bits (74), Expect = 0.047
 Identities = 16/54 (29%), Positives = 26/54 (47%)
 Frame = +1

Query: 136  LFFADDVLLFCQASKEQLQLVNNTLKEFCEASGMKVNLDKSRMLFSKAVDHRRQ 189
            L F  D ++FC+A+  +   +   L  +  A G+ +NLDKS +         RQ
Sbjct: 1102 LLFVGDGIIFCRATTPEENKIREILLMYQSAPGLLINLDKSELSLG*CTPRDRQ 1263


>TC14560 weakly similar to UP|Q8H6C1 (Q8H6C1) Oligomycin sensitivity
           conferring protein, partial (83%)
          Length = 1061

 Score = 28.9 bits (63), Expect = 0.89
 Identities = 11/32 (34%), Positives = 17/32 (52%)
 Frame = +1

Query: 55  FPPRIVDLIMWGVKCPKLSILWNCSKLPSFAP 86
           +PP I+  +  G + PKL  LW C ++    P
Sbjct: 193 WPPEIIPPMCQGKRIPKLRFLWQCLEVQETMP 288


>AV421890 
          Length = 366

 Score = 28.1 bits (61), Expect = 1.5
 Identities = 11/32 (34%), Positives = 16/32 (49%)
 Frame = +2

Query: 56 PPRIVDLIMWGVKCPKLSILWNCSKLPSFAPQ 87
          PP++   I+W     +L + W  SK P   PQ
Sbjct: 65 PPKVQPNILWKNSW*RLPLTWETSKFPQVLPQ 160


>TC18223 
          Length = 601

 Score = 27.3 bits (59), Expect = 2.6
 Identities = 9/16 (56%), Positives = 14/16 (87%)
 Frame = +2

Query: 32  IDLEKAYDRVSWDFLR 47
           +DL+ +YD++SW FLR
Sbjct: 320 VDLQGSYDKISWIFLR 367


>TC15109 similar to UP|Q9FVE9 (Q9FVE9) Cytosolic aconitase, partial (46%)
          Length = 1237

 Score = 26.6 bits (57), Expect = 4.4
 Identities = 15/43 (34%), Positives = 21/43 (47%)
 Frame = -1

Query: 67   VKCPKLSILWNCSKLPSFAPQRGLRQGDPLSPYLFVLCMERLA 109
            + CP L      SK  +F+P+   R   P SP+  +L M  LA
Sbjct: 1060 ISCPSLLYFNAASKTDNFSPEGIWRVLGPTSPFKNLLTMRILA 932


>TC17798 similar to GB|AAM19907.1|20453337|AY097391 At2g42750/F7D19.25
           {Arabidopsis thaliana;}, partial (29%)
          Length = 548

 Score = 26.2 bits (56), Expect = 5.8
 Identities = 10/37 (27%), Positives = 19/37 (51%)
 Frame = -2

Query: 46  LRATLYDFGFPPRIVDLIMWGVKCPKLSILWNCSKLP 82
           L   +Y++G    + +LI W   C ++ +   C +LP
Sbjct: 409 LEFCIYNYGM*QTMDELITWDQMCREIGVTCPCLRLP 299


>BP060544 
          Length = 446

 Score = 25.8 bits (55), Expect = 7.5
 Identities = 13/48 (27%), Positives = 24/48 (49%), Gaps = 1/48 (2%)
 Frame = +3

Query: 150 KEQLQLVNNT-LKEFCEASGMKVNLDKSRMLFSKAVDHRRQINLSHIA 196
           K+++++  N  L  FC    M + +    + FSK      Q ++SH+A
Sbjct: 66  KQKVKITGNMFLNFFCSGPFMCIRISMKNIGFSKTAKCNSQSSISHVA 209


>TC16443 
          Length = 987

 Score = 25.8 bits (55), Expect = 7.5
 Identities = 13/42 (30%), Positives = 21/42 (49%)
 Frame = +1

Query: 67  VKCPKLSILWNCSKLPSFAPQRGLRQGDPLSPYLFVLCMERL 108
           + CP L  + NC ++     +   R G  L PYLF+  + R+
Sbjct: 850 ISCPLLCKM-NCRRMKMICRRIP*RNGGQLQPYLFLSPLHRM 972


>BP084186 
          Length = 348

 Score = 25.4 bits (54), Expect = 9.8
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -1

Query: 95  PLSPYLFVLCMERLAIQIQNLVTQG 119
           P S  L VLC +R+ +Q +NLV  G
Sbjct: 153 PQSTQLVVLCRQRMWLQRENLVGVG 79


  Database: LJGI
    Posted date:  Jul 30, 2004 11:16 AM
  Number of letters in database: 14,692,800
  Number of sequences in database:  28,460
  
Lambda     K      H
   0.325    0.139    0.424 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,536,453
Number of Sequences: 28460
Number of extensions: 62546
Number of successful extensions: 369
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 367
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 367
length of query: 253
length of database: 4,897,600
effective HSP length: 88
effective length of query: 165
effective length of database: 2,393,120
effective search space: 394864800
effective search space used: 394864800
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 54 (25.4 bits)