BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0346.8
(1441 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC9902 similar to UP|BAD07483 (BAD07483) PDR-type ABC transporte... 329 2e-90
BP055095 245 4e-65
BP029778 228 5e-60
BP057421 221 5e-58
BP042918 177 8e-45
TC11137 similar to GB|CAD59563.1|27368811|OSA535041 PDR-like ABC... 166 3e-41
AV406931 162 5e-40
TC8675 weakly similar to UP|Q9LFH0 (Q9LFH0) PDR9 ABC transporter... 97 4e-34
TC18438 similar to UP|Q8GU88 (Q8GU88) PDR-like ABC transporter, ... 135 6e-32
AV408313 115 6e-26
CB828965 99 5e-21
AW720269 97 2e-20
AV416268 97 2e-20
AV771159 66 9e-16
TC9904 weakly similar to UP|Q8GU88 (Q8GU88) PDR-like ABC transpo... 78 1e-14
TC18647 similar to UP|Q9ASR9 (Q9ASR9) At2g01320/F10A8.20, partia... 70 2e-12
BP049546 64 2e-10
BP075566 43 7e-10
BE122583 54 2e-08
AV410765 50 3e-06
>TC9902 similar to UP|BAD07483 (BAD07483) PDR-type ABC transporter 1, partial
(19%)
Length = 1207
Score = 329 bits (843), Expect = 2e-90
Identities = 158/317 (49%), Positives = 215/317 (66%)
Frame = +1
Query: 1125 NSDQYRGVEASILEFEHPPAGSEPLKFDTIYSQSLLSQFYRCLWKQNLVYWRSPPYNAMR 1184
NSD +R + I E P S+ L F T +SQ L Q CLWKQ YWR+PPY A+R
Sbjct: 4 NSDLFRRNKQLIQELGEPAPDSKDLYFATQFSQPFLIQCQACLWKQRWSYWRNPPYTAVR 183
Query: 1185 MYFTTISALVFGTVFWDIGSKRSSTQELYVVMGALYASCLFIGVNNASTVQPIVSIERTV 1244
+FTT A++FGT+FWD+G K Q+L +G++Y++ LF+GV N+S+VQP+VS+ERTV
Sbjct: 184 FFFTTFIAVMFGTIFWDLGGKHKRRQDLLNAVGSMYSAVLFLGVQNSSSVQPVVSVERTV 363
Query: 1245 FYREKAAGMYSPIAYAVAQGLIEIPYIAVQAMVFGLITYFMINFERTAGKFFLYLLFMFL 1304
FYREKAAGMYS + YA AQ L+E+PYI QA+ +G+I Y MI F+ TA KFF YL FM+
Sbjct: 364 FYREKAAGMYSALPYAFAQILVELPYIFFQAVTYGVIVYAMIGFDWTAEKFFWYLFFMYF 543
Query: 1305 TFTYFTFYGMMAVGLSPTQHLAAVISSAFYSLWNLLSGFLIPESHIPGWWIWFYYICPVQ 1364
T YFTFYGMM V ++P H+A+++++AFY++WNL SGF++P IP WW W+Y+ CPV
Sbjct: 544 TLLYFTFYGMMGVAVTPNHHVASIVAAAFYAIWNLFSGFVVPRPSIPVWWRWYYWACPVA 723
Query: 1365 WTLRGVITSQLGDVETKIIGPGFEGTVKEYLSLNLGYDPKIMGISTVGLSVIVLFGFIIL 1424
WT+ G+I SQ GD+ T + G + TVK +L G + S +G+ +V+ G IL
Sbjct: 724 WTIYGLIASQFGDITTVMDTEGGK-TVKMFLEDYYG-----IKHSFIGVCAVVVPGVAIL 885
Query: 1425 FFCSFVVSVKVLNFQKR 1441
F F V++K NFQKR
Sbjct: 886 FAFIFAVAIKAFNFQKR 936
Score = 79.3 bits (194), Expect = 4e-15
Identities = 57/244 (23%), Positives = 110/244 (44%), Gaps = 6/244 (2%)
Frame = +1
Query: 563 AYGNLYVSALFFGLVHMMFNGFSELSLMIARLPVFYKQRDNLFYPAWAWSLTNWVLRVPY 622
A G++Y + LF G+ N S ++ VFY+++ Y A ++ ++ +PY
Sbjct: 274 AVGSMYSAVLFLGVQ----NSSSVQPVVSVERTVFYREKAAGMYSALPYAFAQILVELPY 441
Query: 623 SIIEAVIWTVIVYYTVGFAPSAGRFFRYMFILFVMHQMAIGLFRMMASIARDMVLANTFG 682
+AV + VIVY +GF +A +FF Y+F ++ M ++ + +A+
Sbjct: 442 IFFQAVTYGVIVYAMIGFDWTAEKFFWYLFFMYFTLLYFTFYGMMGVAVTPNHHVASIVA 621
Query: 683 SAALLVIFLLGGFIIPKGMIKPWWIWGYWLSPLTYGQRAITVNEFTASRWMKQSALGNNT 742
+A + L GF++P+ I WW W YW P+ + + ++F + + G T
Sbjct: 622 AAFYAIWNLFSGFVVPRPSIPVWWRWYYWACPVAWTIYGLIASQFGDITTVMDTE-GGKT 798
Query: 743 IG------YNILHAQSLPSEDYWYWVSVAVLVTYAIIFNIMVTLALAYLHPLQKPRTVIP 796
+ Y I H+ + V V+ AI+F + +A+ + ++ TV P
Sbjct: 799 VKMFLEDYYGIKHS--------FIGVCAVVVPGVAILFAFIFAVAIKAFNFQKR*ITVFP 954
Query: 797 QDDE 800
+ ++
Sbjct: 955 KPED 966
>BP055095
Length = 538
Score = 245 bits (625), Expect = 4e-65
Identities = 113/176 (64%), Positives = 145/176 (82%)
Frame = +3
Query: 303 GKKHSVNTDYILKVLGLDICSETIVGSDMLRGVSGGQRKRVTTGEMIVGPRKTLFMDEIS 362
G++ + TDY LKVLGLDIC++ ++G +M RG+SGGQ+KRVTTGEM+VGP K LFMDEIS
Sbjct: 6 GQRSQLVTDYALKVLGLDICADVMIGDEMRRGISGGQKKRVTTGEMLVGPAKALFMDEIS 185
Query: 363 TGLDSSTTFQIVKCIKNFVHLMDATVLMALLQPAPETFELFDDLVLLSEGHVIYEGPREN 422
TGLDSSTTFQI K ++ VH+MD T++++LLQPAPETFELFDD++LLSEG ++Y+GPREN
Sbjct: 186 TGLDSSTTFQICKFMRQMVHIMDVTMVISLLQPAPETFELFDDIILLSEGQIVYQGPREN 365
Query: 423 VLEFFESIGFKLPPRKGIADFLQEVSSRKDQAQYWADPSKQYQFVPSGEIAEAFRN 478
VLEFFE +GFK P RKG ADFLQEV+S+KDQ QYW + Y++V E ++F +
Sbjct: 366 VLEFFEYMGFKCPERKGAADFLQEVTSKKDQEQYWFRKDEPYRYVSVPEFVQSFHS 533
Score = 61.2 bits (147), Expect = 1e-09
Identities = 43/160 (26%), Positives = 84/160 (51%), Gaps = 1/160 (0%)
Frame = +3
Query: 955 STDKKREFVEQVMKLVELDSLRNALVGMPGSSGLSTEQRKRLTIAVELVANPSIIFMDEP 1014
S + + + +K++ LD + ++G G+S Q+KR+T LV +FMDE
Sbjct: 3 SGQRSQLVTDYALKVLGLDICADVMIGDEMRRGISGGQKKRVTTGEMLVGPAKALFMDEI 182
Query: 1015 TSGLDARAAAIVMRAVRNTVD-TGRTVVCTIHQPSIDIFEAFDDLLLMKRGGRVIYGGKL 1073
++GLD+ + + +R V T+V ++ QP+ + FE FDD++L+ G+++Y G
Sbjct: 183 STGLDSSTTFQICKFMRQMVHIMDVTMVISLLQPAPETFELFDDIILLSE-GQIVYQG-- 353
Query: 1074 GVQSQIMIDYFQGIRGIRPIPRGYNPATWVLEVTTPSVEE 1113
+ ++++F+ G + P A ++ EVT+ +E
Sbjct: 354 --PRENVLEFFE-YMGFK-CPERKGAADFLQEVTSKKDQE 461
>BP029778
Length = 438
Score = 228 bits (581), Expect = 5e-60
Identities = 112/140 (80%), Positives = 127/140 (90%)
Frame = -2
Query: 814 STRSTKDESNTKGMILPFQPLTMTFHNVSYFVDMPQEIRKQGIPETRLQLLSNVSGVFSP 873
S++S + KGMILPFQ T+TFHNV+Y+VDMPQEIRKQGI ET+L+LLSNVSGVF+P
Sbjct: 425 SSKSNGGDHKNKGMILPFQQFTVTFHNVNYYVDMPQEIRKQGIIETKLKLLSNVSGVFAP 246
Query: 874 GVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQRTFARISGYVEQNDIHS 933
GVLTAL+GSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK Q TFAR++GYVEQNDIHS
Sbjct: 245 GVLTALMGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKVQHTFARVAGYVEQNDIHS 66
Query: 934 PQVTIEESLWFSASLRLPKE 953
PQVT+EESL FSA LRLP++
Sbjct: 65 PQVTVEESLLFSALLRLPRK 6
Score = 63.9 bits (154), Expect = 2e-10
Identities = 41/111 (36%), Positives = 61/111 (54%)
Frame = -2
Query: 151 INYTRDALETICTNLGIYRPKRHSLTILDNVSGVIKPGRMTLLLGAPGAGKSSLLLALAG 210
+NY D + I GI K L +L NVSGV PG +T L+G+ GAGK++L+ LAG
Sbjct: 344 VNYYVDMPQEI-RKQGIIETK---LKLLSNVSGVFAPGVLTALMGSSGAGKTTLMDVLAG 177
Query: 211 KLDSNLKKTGSITYNGHEADEFFVKRTCAYISQTDNHTAELTVRETLDFAA 261
+ + G I +G+ + R Y+ Q D H+ ++TV E+L F+A
Sbjct: 176 RKTGGYIE-GDIKISGYPKVQHTFARVAGYVEQNDIHSPQVTVEESLLFSA 27
>BP057421
Length = 547
Score = 221 bits (564), Expect = 5e-58
Identities = 109/175 (62%), Positives = 135/175 (76%)
Frame = +3
Query: 211 KLDSNLKKTGSITYNGHEADEFFVKRTCAYISQTDNHTAELTVRETLDFAARCQGAQEGF 270
K+D L+ TG ITYNGH+ +EF ++T AYISQ D H E+TV+ETLDF+ARCQG +
Sbjct: 24 KMDHELRVTGEITYNGHKLNEFVPRKTAAYISQNDVHVGEMTVKETLDFSARCQGVGTRY 203
Query: 271 AAYTKDIGRLENERNIRPSPEIDAFMKASSVGGKKHSVNTDYILKVLGLDICSETIVGSD 330
+ ++GR E E I P E+D FMKA+++ G + S+ TDY LK+LGLDIC +TIVG +
Sbjct: 204 DXLS-ELGRREKEAGIFPEAELDLFMKATALKGTESSLITDYTLKILGLDICKDTIVGDE 380
Query: 331 MLRGVSGGQRKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCIKNFVHLMD 385
M RGVSGGQ+KRVTTGEMIVGP KTLFMDEISTGLDSSTTFQIVKC++ VHL +
Sbjct: 381 MHRGVSGGQKKRVTTGEMIVGPTKTLFMDEISTGLDSSTTFQIVKCLQQIVHLTE 545
Score = 54.7 bits (130), Expect = 1e-07
Identities = 38/163 (23%), Positives = 73/163 (44%), Gaps = 31/163 (19%)
Frame = +3
Query: 903 IEGDIKISGYPKEQRTFARISGYVEQNDIHSPQVTIEESLWFSASL-------------- 948
+ G+I +G+ + + + Y+ QND+H ++T++E+L FSA
Sbjct: 45 VTGEITYNGHKLNEFVPRKTAAYISQNDVHVGEMTVKETLDFSARCQGVGTRYDXLSELG 224
Query: 949 RLPKEISTDKKREF-----------------VEQVMKLVELDSLRNALVGMPGSSGLSTE 991
R KE + E + +K++ LD ++ +VG G+S
Sbjct: 225 RREKEAGIFPEAELDLFMKATALKGTESSLITDYTLKILGLDICKDTIVGDEMHRGVSGG 404
Query: 992 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTV 1034
Q+KR+T +V +FMDE ++GLD+ +++ ++ V
Sbjct: 405 QKKRVTTGEMIVGPTKTLFMDEISTGLDSSTTFQIVKCLQQIV 533
>BP042918
Length = 412
Score = 177 bits (450), Expect = 8e-45
Identities = 71/135 (52%), Positives = 105/135 (77%)
Frame = -3
Query: 591 IARLPVFYKQRDNLFYPAWAWSLTNWVLRVPYSIIEAVIWTVIVYYTVGFAPSAGRFFRY 650
I RLPVFYK RD+LF+PAW +++ N++LR+P SI E+++W I YYT GFAP A RFF+
Sbjct: 407 IQRLPVFYKHRDHLFHPAWTYTVPNFLLRIPISIFESLVWVAITYYTTGFAPEASRFFKQ 228
Query: 651 MFILFVMHQMAIGLFRMMASIARDMVLANTFGSAALLVIFLLGGFIIPKGMIKPWWIWGY 710
+ ++F++ QMA G+FR+++ + R M++ANT G+ LL++FLLGGF++PK I WW+W Y
Sbjct: 227 LLVVFLIQQMAAGMFRLISGVCRTMIIANTGGALMLLLVFLLGGFLLPKRAIPDWWVWAY 48
Query: 711 WLSPLTYGQRAITVN 725
W+SPL+Y ++TVN
Sbjct: 47 WISPLSYAFNSLTVN 3
Score = 69.7 bits (169), Expect = 3e-12
Identities = 38/127 (29%), Positives = 60/127 (46%)
Frame = -3
Query: 1244 VFYREKAAGMYSPIAYAVAQGLIEIPYIAVQAMVFGLITYFMINFERTAGKFFLYLLFMF 1303
VFY+ + + Y V L+ IP +++V+ ITY+ F A +FF LL +F
Sbjct: 392 VFYKHRDHLFHPAWTYTVPNFLLRIPISIFESLVWVAITYYTTGFAPEASRFFKQLLVVF 213
Query: 1304 LTFTYFTFYGMMAVGLSPTQHLAAVISSAFYSLWNLLSGFLIPESHIPGWWIWFYYICPV 1363
L + G+ T +A + L LL GFL+P+ IP WW+W Y+I P+
Sbjct: 212 LIQQMAAGMFRLISGVCRTMIIANTGGALMLLLVFLLGGFLLPKRAIPDWWVWAYWISPL 33
Query: 1364 QWTLRGV 1370
+ +
Sbjct: 32 SYAFNSL 12
>TC11137 similar to GB|CAD59563.1|27368811|OSA535041 PDR-like ABC transporter
{Oryza sativa (japonica cultivar-group);}, partial (15%)
Length = 786
Score = 166 bits (419), Expect = 3e-41
Identities = 93/262 (35%), Positives = 135/262 (51%), Gaps = 9/262 (3%)
Frame = +1
Query: 1175 WRSPPYNAMRMYF--TTISALVFGTVFWDIGSKRSSTQELYVVMGALYASCLFI----GV 1228
WRSP YN +R F + S LV K + T+ C+ + +
Sbjct: 16 WRSPDYNLVRFSFPCSLPSWLVL------FSGKLAKTRRALPT*AWS*EHCMLLLFLLEL 177
Query: 1229 NNASTVQPIVSIERTVFYREKAAGMYSPIAYAVAQGLIEIPYIAVQAMVFGLITYFMINF 1288
A + ++ + MY+P+ YA+AQ EIPY+ Q + LI Y M++F
Sbjct: 178 TTAKLFNQLWPLKELYSIEKGLLAMYAPLPYAIAQVFTEIPYVFAQTTFYSLIVYAMVSF 357
Query: 1289 ERTAGKFFLYLLFMFLTFTYFTFYGMMAVGLSPTQHLAAVISSAFYSLWNLLSGFLIPES 1348
+ KFF Y F +F YFT+YGMM V ++P +A++ ++AFY L+NL SGF IP
Sbjct: 358 DWKVDKFFWYFFVSFFSFLYFTYYGMMTVSITPNHQVASIFAAAFYGLFNLFSGFFIPRP 537
Query: 1349 HIPGWWIWFYYICPVQWTLRGVITSQLGDVET--KIIGPGFEGTVKEYLSLNLGYDPKIM 1406
IPGWW+W+Y+ICPV WT+ G+I SQ D+ + + G TVK Y+ G+ P M
Sbjct: 538 KIPGWWVWYYWICPVAWTVYGLIVSQYRDITSPISVAGSTQNFTVKGYIEDYYGFKPDFM 717
Query: 1407 GISTVGLSVIVLFG-FIILFFC 1427
G +V+VLF F+ L C
Sbjct: 718 GPVA---AVLVLFTCFLCLCIC 774
Score = 65.9 bits (159), Expect = 4e-11
Identities = 32/122 (26%), Positives = 56/122 (45%)
Frame = +1
Query: 606 YPAWAWSLTNWVLRVPYSIIEAVIWTVIVYYTVGFAPSAGRFFRYMFILFVMHQMAIGLF 665
Y +++ +PY + +++IVY V F +FF Y F+ F
Sbjct: 253 YAPLPYAIAQVFTEIPYVFAQTTFYSLIVYAMVSFDWKVDKFFWYFFVSFFSFLYFTYYG 432
Query: 666 RMMASIARDMVLANTFGSAALLVIFLLGGFIIPKGMIKPWWIWGYWLSPLTYGQRAITVN 725
M SI + +A+ F +A + L GF IP+ I WW+W YW+ P+ + + V+
Sbjct: 433 MMTVSITPNHQVASIFAAAFYGLFNLFSGFFIPRPKIPGWWVWYYWICPVAWTVYGLIVS 612
Query: 726 EF 727
++
Sbjct: 613 QY 618
>AV406931
Length = 438
Score = 162 bits (409), Expect = 5e-40
Identities = 72/144 (50%), Positives = 106/144 (73%)
Frame = +3
Query: 372 QIVKCIKNFVHLMDATVLMALLQPAPETFELFDDLVLLSEGHVIYEGPRENVLEFFESIG 431
QIV ++ +VH+++ T +++LLQPAPET++LFDD++L+S+G V+Y GPRE VL+FFES+G
Sbjct: 3 QIVSSLRQYVHILNGTAVISLLQPAPETYDLFDDIILISDGQVVYHGPREYVLDFFESMG 182
Query: 432 FKLPPRKGIADFLQEVSSRKDQAQYWADPSKQYQFVPSGEIAEAFRNSRFGSYVESLQTH 491
FK P RKG ADFLQEV+S+KDQ QYW + Y+FV + AEAF++ G +
Sbjct: 183 FKCPERKGAADFLQEVTSKKDQEQYWVRRDEPYRFVTVTQFAEAFQSFHIGRKLAEEVAV 362
Query: 492 PYDKSKCHPSALARTKYAVSRWEI 515
P+DK+K HP+AL +Y +++ E+
Sbjct: 363 PFDKTKSHPAALTTKEYGINKKEL 434
Score = 32.7 bits (73), Expect = 0.42
Identities = 21/75 (28%), Positives = 43/75 (57%)
Frame = +3
Query: 1039 TVVCTIHQPSIDIFEAFDDLLLMKRGGRVIYGGKLGVQSQIMIDYFQGIRGIRPIPRGYN 1098
T V ++ QP+ + ++ FDD++L+ G+V+Y G + ++D+F+ + G + P
Sbjct: 48 TAVISLLQPAPETYDLFDDIILIS-DGQVVYHG----PREYVLDFFESM-GFK-CPERKG 206
Query: 1099 PATWVLEVTTPSVEE 1113
A ++ EVT+ +E
Sbjct: 207 AADFLQEVTSKKDQE 251
>TC8675 weakly similar to UP|Q9LFH0 (Q9LFH0) PDR9 ABC transporter, partial
(13%)
Length = 727
Score = 96.7 bits (239), Expect(2) = 4e-34
Identities = 45/129 (34%), Positives = 72/129 (54%)
Frame = +1
Query: 1313 GMMAVGLSPTQHLAAVISSAFYSLWNLLSGFLIPESHIPGWWIWFYYICPVQWTLRGVIT 1372
GM V ++P LA+++ S+FY++ NL SG+ +P +P WW+W YY+CP+ W + G++T
Sbjct: 226 GMFIVSVTPNVQLASILCSSFYTILNLFSGYFMPRPQMPKWWVWMYYLCPLSWAMNGMLT 405
Query: 1373 SQLGDVETKIIGPGFEGTVKEYLSLNLGYDPKIMGISTVGLSVIVLFGFIILFFCSFVVS 1432
SQ GD+ + TV +L G+ +G++ V VL F I+F F
Sbjct: 406 SQYGDINKNMSVFEDVKTVATFLEDYYGFRYDFLGVTAV-----VLIVFPIVFAALFAYC 570
Query: 1433 VKVLNFQKR 1441
+ LNF +R
Sbjct: 571 IGNLNFPRR 597
Score = 67.0 bits (162), Expect(2) = 4e-34
Identities = 35/71 (49%), Positives = 45/71 (63%)
Frame = +3
Query: 1241 ERTVFYREKAAGMYSPIAYAVAQGLIEIPYIAVQAMVFGLITYFMINFERTAGKFFLYLL 1300
ERTV YRE+ AGMYSP AY+ AQ LIE+PY +QA ++ +ITY MI +A K F
Sbjct: 9 ERTVLYRERFAGMYSPWAYSFAQVLIEVPYSFIQAALYVIITYPMIGHYWSAYKIFWSFF 188
Query: 1301 FMFLTFTYFTF 1311
MF + F +
Sbjct: 189 SMFCSILNFNY 221
Score = 45.8 bits (107), Expect(2) = 1e-12
Identities = 26/130 (20%), Positives = 60/130 (46%), Gaps = 6/130 (4%)
Frame = +1
Query: 663 GLFRMMASIARDMVLANTFGSAALLVIFLLGGFIIPKGMIKPWWIWGYWLSPLTYGQRAI 722
G+F + S+ ++ LA+ S+ ++ L G+ +P+ + WW+W Y+L PL++ +
Sbjct: 226 GMF--IVSVTPNVQLASILCSSFYTILNLFSGYFMPRPQMPKWWVWMYYLCPLSWAMNGM 399
Query: 723 TVNEFTASRWMKQSALGNNTIGYNILHAQSLPSEDYWYW------VSVAVLVTYAIIFNI 776
+++ + N + + + EDY+ + V+ VL+ + I+F
Sbjct: 400 LTSQY--------GDINKNMSVFEDVKTVATFLEDYYGFRYDFLGVTAVVLIVFPIVFAA 555
Query: 777 MVTLALAYLH 786
+ + L+
Sbjct: 556 LFAYCIGNLN 585
Score = 45.1 bits (105), Expect(2) = 1e-12
Identities = 21/60 (35%), Positives = 33/60 (55%)
Frame = +3
Query: 596 VFYKQRDNLFYPAWAWSLTNWVLRVPYSIIEAVIWTVIVYYTVGFAPSAGRFFRYMFILF 655
V Y++R Y WA+S ++ VPYS I+A ++ +I Y +G SA + F F +F
Sbjct: 18 VLYRERFAGMYSPWAYSFAQVLIEVPYSFIQAALYVIITYPMIGHYWSAYKIFWSFFSMF 197
>TC18438 similar to UP|Q8GU88 (Q8GU88) PDR-like ABC transporter, partial (8%)
Length = 522
Score = 135 bits (339), Expect = 6e-32
Identities = 61/141 (43%), Positives = 90/141 (63%)
Frame = +1
Query: 1301 FMFLTFTYFTFYGMMAVGLSPTQHLAAVISSAFYSLWNLLSGFLIPESHIPGWWIWFYYI 1360
FMF T YFT+YGMM V ++P H+A+++++AFY++WNL SGF++P IP WW W+Y+
Sbjct: 1 FMFFTLCYFTYYGMMTVAVTPNHHVASIVAAAFYAIWNLFSGFVVPRPRIPVWWRWYYWA 180
Query: 1361 CPVQWTLRGVITSQLGDVETKIIGPGFEGTVKEYLSLNLGYDPKIMGISTVGLSVIVLFG 1420
CPV WT+ G++ SQ GD+E I + +VKE++ G M +G+ +V+ G
Sbjct: 181 CPVAWTIYGMVASQFGDIEH--ILESDDVSVKEFIRSYFG-----MKHDFIGVCAVVVVG 339
Query: 1421 FIILFFCSFVVSVKVLNFQKR 1441
F + F F VS KV NF +R
Sbjct: 340 FAVGFAFIFAVSFKVFNFPRR 402
Score = 38.9 bits (89), Expect = 0.006
Identities = 15/61 (24%), Positives = 30/61 (48%)
Frame = +1
Query: 667 MMASIARDMVLANTFGSAALLVIFLLGGFIIPKGMIKPWWIWGYWLSPLTYGQRAITVNE 726
M ++ + +A+ +A + L GF++P+ I WW W YW P+ + + ++
Sbjct: 43 MTVAVTPNHHVASIVAAAFYAIWNLFSGFVVPRPRIPVWWRWYYWACPVAWTIYGMVASQ 222
Query: 727 F 727
F
Sbjct: 223 F 225
>AV408313
Length = 342
Score = 115 bits (287), Expect = 6e-26
Identities = 55/113 (48%), Positives = 72/113 (63%)
Frame = +3
Query: 1106 VTTPSVEETIDADFAEIYNNSDQYRGVEASILEFEHPPAGSEPLKFDTIYSQSLLSQFYR 1165
VT+ + E TI DF + Y NS+ YR + I E P GS L F T YSQS L Q
Sbjct: 3 VTSSAQEVTIGVDFHQTYKNSELYRRNKQLIAELGIPAPGSNDLYFPTQYSQSFLVQCLA 182
Query: 1166 CLWKQNLVYWRSPPYNAMRMYFTTISALVFGTVFWDIGSKRSSTQELYVVMGA 1218
CLWKQ+ YWR+PPY A+R +FTT AL+FGT+FWD+G K + Q+L+ +G+
Sbjct: 183 CLWKQHWSYWRNPPYTAVRFFFTTFIALIFGTMFWDLGGKYKNRQDLFNALGS 341
>CB828965
Length = 436
Score = 99.0 bits (245), Expect = 5e-21
Identities = 50/108 (46%), Positives = 66/108 (60%), Gaps = 1/108 (0%)
Frame = +1
Query: 1335 SLWNLLSGFLIPESHIPGWWIWFYYICPVQWTLRGVITSQLGDVETKIIGPGFEG-TVKE 1393
+ WNL SGFLIP + IP WW W+Y+ PV WT+ G++TSQ+GD + I PGF TVK+
Sbjct: 1 NFWNLFSGFLIPRTQIPIWWRWYYWASPVAWTIYGLVTSQVGDKNSTIEVPGFRPMTVKD 180
Query: 1394 YLSLNLGYDPKIMGISTVGLSVIVLFGFIILFFCSFVVSVKVLNFQKR 1441
YL G+ +G+ V L+ I F +LF F +K LNFQKR
Sbjct: 181 YLERQFGFQHDFLGV--VALTHI---AFSLLFLFVFAYGIKFLNFQKR 309
Score = 38.1 bits (87), Expect = 0.010
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +1
Query: 691 LLGGFIIPKGMIKPWWIWGYWLSPLTY 717
L GF+IP+ I WW W YW SP+ +
Sbjct: 13 LFSGFLIPRTQIPIWWRWYYWASPVAW 93
>AW720269
Length = 524
Score = 97.1 bits (240), Expect = 2e-20
Identities = 60/160 (37%), Positives = 97/160 (60%), Gaps = 2/160 (1%)
Frame = +3
Query: 861 LQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGR-KTGGYIEGDIKISGYPKEQRTF 919
+ +L +VS V + A+VG SG GK+TL+ ++AGR K + I I+ +P
Sbjct: 48 VNILKSVSFVARSSEIVAVVGPSGTGKSTLLRIIAGRVKDRDFDPKTISINDHPMTSPAQ 227
Query: 920 AR-ISGYVEQNDIHSPQVTIEESLWFSASLRLPKEISTDKKREFVEQVMKLVELDSLRNA 978
R I G+V Q D P +T++E+L FSA RL KE++ + + VE +M+ + L + ++
Sbjct: 228 LRKICGFVAQEDNLLPLLTVKETLLFSAKFRL-KEMTPNDREMRVESLMQELGLFHVSDS 404
Query: 979 LVGMPGSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1018
VG + G+S +RKR++I V+++ NP I+ +DEPTSGL
Sbjct: 405 FVGDEENRGISGGERKRVSIGVDMIHNPPILLLDEPTSGL 524
Score = 72.0 bits (175), Expect = 6e-13
Identities = 54/196 (27%), Positives = 94/196 (47%), Gaps = 1/196 (0%)
Frame = +3
Query: 171 KRHSLTILDNVSGVIKPGRMTLLLGAPGAGKSSLLLALAGKLDSNLKKTGSITYNGHE-A 229
K + IL +VS V + + ++G G GKS+LL +AG++ +I+ N H
Sbjct: 36 KPKPVNILKSVSFVARSSEIVAVVGPSGTGKSTLLRIIAGRVKDRDFDPKTISINDHPMT 215
Query: 230 DEFFVKRTCAYISQTDNHTAELTVRETLDFAARCQGAQEGFAAYTKDIGRLENERNIRPS 289
+++ C +++Q DN LTV+ETL F+A+ + + N+R +R
Sbjct: 216 SPAQLRKICGFVAQEDNLLPLLTVKETLLFSAKFRLKE-----------MTPNDREMR-- 356
Query: 290 PEIDAFMKASSVGGKKHSVNTDYILKVLGLDICSETIVGSDMLRGVSGGQRKRVTTGEMI 349
+ +++ LGL S++ VG + RG+SGG+RKRV+ G +
Sbjct: 357 --------------------VESLMQELGLFHVSDSFVGDEENRGISGGERKRVSIGVDM 476
Query: 350 VGPRKTLFMDEISTGL 365
+ L +DE ++GL
Sbjct: 477 IHNPPILLLDEPTSGL 524
>AV416268
Length = 424
Score = 96.7 bits (239), Expect = 2e-20
Identities = 52/137 (37%), Positives = 87/137 (62%), Gaps = 3/137 (2%)
Frame = +3
Query: 936 VTIEESLWFSASLRLPKEISTDKKREFVEQVMKLVELDSLRNALVGMPGSSGLSTEQRKR 995
+T+ E++++SA L+LP +S +KRE + +K + L N +G GS G+S Q++R
Sbjct: 12 LTVGEAVYYSAHLQLPDSMSKSEKRERADFTIKEMGLQDAINTRIGGWGSKGVSGGQKRR 191
Query: 996 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVR--NTVD-TGRTVVCTIHQPSIDIF 1052
++I +E++ +P ++F+DEPTSGLD+ A+ V+ + N D RT+V +IHQPS +IF
Sbjct: 192 VSICIEILTHPRLLFLDEPTSGLDSAASYHVISRISSLNKKDGIQRTIVASIHQPSNEIF 371
Query: 1053 EAFDDLLLMKRGGRVIY 1069
+ F L L+ G V +
Sbjct: 372 QLFHSLCLLSSGKTVYF 422
Score = 68.9 bits (167), Expect = 5e-12
Identities = 38/108 (35%), Positives = 64/108 (59%), Gaps = 2/108 (1%)
Frame = +3
Query: 311 DYILKVLGLDICSETIVGSDMLRGVSGGQRKRVTTGEMIVGPRKTLFMDEISTGLDSSTT 370
D+ +K +GL T +G +GVSGGQ++RV+ I+ + LF+DE ++GLDS+ +
Sbjct: 96 DFTIKEMGLQDAINTRIGGWGSKGVSGGQKRRVSICIEILTHPRLLFLDEPTSGLDSAAS 275
Query: 371 FQIVKCIK--NFVHLMDATVLMALLQPAPETFELFDDLVLLSEGHVIY 416
+ ++ I N + T++ ++ QP+ E F+LF L LLS G +Y
Sbjct: 276 YHVISRISSLNKKDGIQRTIVASIHQPSNEIFQLFHSLCLLSSGKTVY 419
>AV771159
Length = 486
Score = 65.9 bits (159), Expect = 4e-11
Identities = 31/87 (35%), Positives = 51/87 (57%)
Frame = -3
Query: 1001 ELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIDIFEAFDDLLL 1060
+L+ +PS++ +DEPTSGLD+ A ++ + GRTVV TIHQPS ++ FD ++L
Sbjct: 343 KLLIHPSLLLLDEPTSGLDSTTALRILNTIPRLATGGRTVVTTIHQPSSRLYYMFDKVVL 164
Query: 1061 MKRGGRVIYGGKLGVQSQIMIDYFQGI 1087
+ G + YG + ++YF +
Sbjct: 163 LSEGCPIYYG-----PASTALEYFSSV 98
Score = 62.4 bits (150), Expect(2) = 9e-16
Identities = 35/93 (37%), Positives = 52/93 (55%)
Frame = -3
Query: 356 LFMDEISTGLDSSTTFQIVKCIKNFVHLMDATVLMALLQPAPETFELFDDLVLLSEGHVI 415
L +DE ++GLDS+T +I+ I TV+ + QP+ + +FD +VLLSEG I
Sbjct: 319 LLLDEPTSGLDSTTALRILNTIPRLA-TGGRTVVTTIHQPSSRLYYMFDKVVLLSEGCPI 143
Query: 416 YEGPRENVLEFFESIGFKLPPRKGIADFLQEVS 448
Y GP LE+F S+GF AD L +++
Sbjct: 142 YYGPASTALEYFSSVGFSTCVTVNPADLLLDLA 44
Score = 39.3 bits (90), Expect(2) = 9e-16
Identities = 15/46 (32%), Positives = 29/46 (62%)
Frame = -2
Query: 309 NTDYILKVLGLDICSETIVGSDMLRGVSGGQRKRVTTGEMIVGPRK 354
+ + ++ LGL C +++G +LRG+SG +++RV+ G+ P K
Sbjct: 461 HVERVITELGLSGCRSSMIGGPLLRGISGAEKRRVSIGQETAHPSK 324
>TC9904 weakly similar to UP|Q8GU88 (Q8GU88) PDR-like ABC transporter,
partial (6%)
Length = 547
Score = 77.8 bits (190), Expect = 1e-14
Identities = 39/102 (38%), Positives = 55/102 (53%), Gaps = 2/102 (1%)
Frame = +1
Query: 1342 GFLIPESHIPGWWIWFYYICPVQWTLRGVITSQLGDVETKIIGPG--FEGTVKEYLSLNL 1399
GF IP IP WW+W+Y+ICPV WT+ G+I S D+ + PG + +K+Y+ +
Sbjct: 1 GFFIPNPKIPKWWVWYYWICPVAWTVYGLIVSPYRDITPGLSVPGRSDQPALKDYIEDHY 180
Query: 1400 GYDPKIMGISTVGLSVIVLFGFIILFFCSFVVSVKVLNFQKR 1441
G+ M G VL F + F F ++KVLNFQ R
Sbjct: 181 GFKSDFM-----GPVACVLVAFPVFFAFVFAFAIKVLNFQTR 291
Score = 37.7 bits (86), Expect = 0.013
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 694 GFIIPKGMIKPWWIWGYWLSPLTYGQRAITVNEF 727
GF IP I WW+W YW+ P+ + + V+ +
Sbjct: 1 GFFIPNPKIPKWWVWYYWICPVAWTVYGLIVSPY 102
>TC18647 similar to UP|Q9ASR9 (Q9ASR9) At2g01320/F10A8.20, partial (17%)
Length = 430
Score = 70.1 bits (170), Expect = 2e-12
Identities = 39/104 (37%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Frame = +1
Query: 863 LLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGG---YIEGDIKISGYPKEQRTF 919
LL NVSG PG L A++G SG+GKTTL++VLAG+ ++ G ++ +G P + +
Sbjct: 106 LLKNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLAASPRLHLSGLLEFNGKPGSKNAY 285
Query: 920 ARISGYVEQNDIHSPQVTIEESLWFSASLRLPKEISTDKKREFV 963
YV Q D+ Q+T+ E+L + L+LP S +++ E+V
Sbjct: 286 K--FAYVRQEDLFFSQLTVRETLSLATELQLPNISSAEERDEYV 411
Score = 62.0 bits (149), Expect = 6e-10
Identities = 37/90 (41%), Positives = 54/90 (59%), Gaps = 2/90 (2%)
Frame = +1
Query: 177 ILDNVSGVIKPGRMTLLLGAPGAGKSSLLLALAGKLDSN--LKKTGSITYNGHEADEFFV 234
+L NVSG KPGR+ ++G G+GK++LL LAG+L ++ L +G + +NG +
Sbjct: 106 LLKNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLAASPRLHLSGLLEFNGKPGSKNAY 285
Query: 235 KRTCAYISQTDNHTAELTVRETLDFAARCQ 264
K AY+ Q D ++LTVRETL A Q
Sbjct: 286 K--FAYVRQEDLFFSQLTVRETLSLATELQ 369
>BP049546
Length = 511
Score = 63.9 bits (154), Expect = 2e-10
Identities = 34/87 (39%), Positives = 52/87 (59%), Gaps = 2/87 (2%)
Frame = -1
Query: 1357 FYYICPVQWTLRGVITSQLGDVETKIIGPGFEG--TVKEYLSLNLGYDPKIMGISTVGLS 1414
+Y+ PV W+L G+ITSQLG+ + +++ PG +G TVK++L NLGY +
Sbjct: 511 YYWASPVAWSLNGLITSQLGNKDAEVVIPG-DGSMTVKQFLKENLGYHYDFLPAIAA--- 344
Query: 1415 VIVLFGFIILFFCSFVVSVKVLNFQKR 1441
G+++LF C F +K LN+QKR
Sbjct: 343 --AHVGWVLLFGCGFAFGIKFLNYQKR 269
>BP075566
Length = 253
Score = 42.7 bits (99), Expect(2) = 7e-10
Identities = 19/38 (50%), Positives = 27/38 (71%)
Frame = -1
Query: 297 KASSVGGKKHSVNTDYILKVLGLDICSETIVGSDMLRG 334
+ + V G + S+ TDY L +LGLDIC +T++G DM RG
Sbjct: 196 RLTXVKGTETSLITDYTLTLLGLDICKDTLLGDDMHRG 83
Score = 38.9 bits (89), Expect(2) = 7e-10
Identities = 18/27 (66%), Positives = 22/27 (80%)
Frame = -2
Query: 335 VSGGQRKRVTTGEMIVGPRKTLFMDEI 361
+SGGQ+KRVTTGEMIVGP + L +I
Sbjct: 81 LSGGQKKRVTTGEMIVGPTQHLLWMDI 1
>BE122583
Length = 361
Score = 53.5 bits (127), Expect(2) = 2e-08
Identities = 19/40 (47%), Positives = 33/40 (82%)
Frame = +3
Query: 816 RSTKDESNTKGMILPFQPLTMTFHNVSYFVDMPQEIRKQG 855
++ ++ + KGM+LPFQPL++ F NV+Y+++MP E++KQG
Sbjct: 147 KAAENAKSKKGMVLPFQPLSLAFENVNYYIEMPNEMKKQG 266
Score = 23.1 bits (48), Expect(2) = 2e-08
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +1
Query: 871 FSPGVLTALVGSSGAGK 887
F TALVG SGAGK
Sbjct: 310 FQASDFTALVGVSGAGK 360
>AV410765
Length = 167
Score = 50.1 bits (118), Expect = 3e-06
Identities = 26/55 (47%), Positives = 35/55 (63%)
Frame = +3
Query: 482 GSYVESLQTHPYDKSKCHPSALARTKYAVSRWEISKACFAREALLISRQRFLYIF 536
G +ES + P+DKS H +AL TK +V +I KAC+ +E LLI R F+YIF
Sbjct: 3 GVQLESELSVPFDKSSAHKAALVYTKNSVPTKDIFKACWDKEWLLIQRNSFVYIF 167
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.323 0.138 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,663,179
Number of Sequences: 28460
Number of extensions: 332545
Number of successful extensions: 2161
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 2079
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2141
length of query: 1441
length of database: 4,897,600
effective HSP length: 102
effective length of query: 1339
effective length of database: 1,994,680
effective search space: 2670876520
effective search space used: 2670876520
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)
Lotus: description of TM0346.8