BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0331c.2
(1291 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BG662087 209 2e-54
BP030435 155 5e-38
BG662122 86 4e-17
TC18698 72 6e-13
BP065719 55 9e-08
BP033666 39 3e-07
AV410603 51 1e-06
TC19505 weakly similar to UP|Q9FG35 (Q9FG35) Emb|CAB82953.1, par... 43 1e-05
AV408480 47 2e-05
AV429304 44 2e-04
AU251563 44 2e-04
AV409241 43 4e-04
AV416351 42 5e-04
TC14757 similar to UP|O04361 (O04361) Prohibitin, complete 42 5e-04
TC13235 similar to UP|Q9LQB6 (Q9LQB6) F4N2.1, partial (38%) 42 6e-04
TC8682 similar to UP|HPPD_SOLSC (Q9ARF9) 4-hydroxyphenylpyruvate... 42 6e-04
AV411591 42 8e-04
TC8967 similar to UP|FXGA_HUMAN (P55316) Forkhead box protein G1... 41 0.001
TC18617 weakly similar to UP|Q9FPQ5 (Q9FPQ5) Gamete-specific hyd... 41 0.001
AV410227 41 0.001
>BG662087
Length = 373
Score = 209 bits (532), Expect = 2e-54
Identities = 99/120 (82%), Positives = 107/120 (88%)
Frame = +1
Query: 848 NGKWRMCVDYTDLNKACPKDSYPLPSIDSLVDGASGNELLSLMDAYSGNHQIRMHPADED 907
+GKWRM VDYTDLNKACPKDSYPLPSID LVDGAS NELLSLMDAYSG HQI+MHP+DED
Sbjct: 13 SGKWRMWVDYTDLNKACPKDSYPLPSIDKLVDGASDNELLSLMDAYSGYHQIKMHPSDED 192
Query: 908 KTAFMTARANYCYRTMPFGLKNAGATYQRLMDRVFAGQVGRNMEVYVDDMIVKSVRGLDH 967
KTAFMTAR NYCY+T+PFGLKNAGATYQ LMDRVF VGRNMEVY+D+MIVKS +H
Sbjct: 193 KTAFMTARVNYCYQTIPFGLKNAGATYQXLMDRVFXDXVGRNMEVYLDNMIVKSALRANH 372
>BP030435
Length = 533
Score = 155 bits (391), Expect = 5e-38
Identities = 90/186 (48%), Positives = 107/186 (57%)
Frame = +1
Query: 415 CEFHRSAGHDTDDCWTLQREIDKLIRAGYQGNRQGLWRNGGDQNKAHKREEERADTKGKK 474
C +H++ GH T++C TLQRE+ KLI G K +
Sbjct: 103 CVYHQAMGHITEECRTLQREVGKLIATG----------------------------KPTR 198
Query: 475 KQESAAIATKGADDTFAQHSGPPVGTINTIAGGFGGGGDTHAARKRHVRAVNSVHEVAFG 534
Q A KG ++TIAGGFGGGG T AARKR+ RAVN+V EV FG
Sbjct: 199 IQGGNAPVPKG---------------VHTIAGGFGGGGITSAARKRYARAVNTVTEVLFG 333
Query: 535 FVHPDITISMADFEGIKPHKDDPIVVQLRMNSFNVRRVLLDQGSSADIIYGDAFDKLGLT 594
F HP IT S DF IKPH D+PIV+ LR+N NV+RVLLDQGSSADIIYG FD+LGL
Sbjct: 334 FSHPVITFSSDDFIRIKPHLDNPIVILLRVNQLNVQRVLLDQGSSADIIYGGVFDRLGLN 513
Query: 595 DNDLTP 600
+ DLTP
Sbjct: 514 EADLTP 531
>BG662122
Length = 386
Score = 85.9 bits (211), Expect = 4e-17
Identities = 52/126 (41%), Positives = 75/126 (59%), Gaps = 11/126 (8%)
Frame = +2
Query: 348 KEQLYPRRDDYEQRRPWQSKSHRQREETDMVMNTDLSDMLQGARDANLVDEPEAPKYQPR 407
+EQLYPRR+ ++RRP Q R+REE DM +N L+D+LQ + A++V + PR
Sbjct: 11 REQLYPRREALDRRRP*QPMGSRRREE-DMELNAHLTDILQDVKAAHMVGKSGQS*PPPR 187
Query: 408 DA-NPKKWCEFHRSAGHDTDDCWTLQREIDKLIRAG----------YQGNRQGLWRNGGD 456
+ K CE+ RS HD DDC+TL+REI+KLI+ G QG+RQ R GD
Sbjct: 188 RGIDTTK*CEYRRSVVHDIDDCFTLKREIEKLIKMGRLKQYDRGSRQQGDRQQGGRLQGD 367
Query: 457 QNKAHK 462
+ + ++
Sbjct: 368 RQQGNR 385
>TC18698
Length = 808
Score = 72.0 bits (175), Expect = 6e-13
Identities = 36/71 (50%), Positives = 45/71 (62%)
Frame = -2
Query: 908 KTAFMTARANYCYRTMPFGLKNAGATYQRLMDRVFAGQVGRNMEVYVDDMIVKSVRGLDH 967
KT R NY Y+ MP GLKN TYQRLMD++F Q+ +N+EVYV+DMIVKS + H
Sbjct: 801 KTTLKINRVNYYYQVMPLGLKNI*TTYQRLMDKIFHKQI*KNVEVYVEDMIVKSSQE*FH 622
Query: 968 HQDLEEAFGEI 978
DL +I
Sbjct: 621 RGDLSRDLSDI 589
>BP065719
Length = 567
Score = 54.7 bits (130), Expect = 9e-08
Identities = 32/120 (26%), Positives = 59/120 (48%), Gaps = 2/120 (1%)
Frame = +3
Query: 127 FSEDVESVAIPDNMKTLVLDSYSGDSDPK--DHLLYFNTKMVIIAASDAVKCRMFPSTFK 184
F E+V +P K +SGDS +H+ + + +A ++ +K + FPS+
Sbjct: 135 FIEEVLESELPRGWKVPKFTKFSGDSGESTVEHIARYQIEAGDLAINENLKMKYFPSSLT 314
Query: 185 STAMAWFTTLPRGSISNFRDFSSKFLVQFSANKNQPVTINDLYNIRQQEGESLKEYMARY 244
A WFTTL S+ + F QF + + V+ DL +++++ ES+ +Y+ R+
Sbjct: 315 KNAFTWFTTLAPRSVHTWAQLERIFHEQFFRGECK-VSXKDLASVKRKPAESIDDYLNRF 491
>BP033666
Length = 342
Score = 38.9 bits (89), Expect(2) = 3e-07
Identities = 19/40 (47%), Positives = 25/40 (62%)
Frame = -1
Query: 205 FSSKFLVQFSANKNQPVTINDLYNIRQQEGESLKEYMARY 244
F + FL FSAN+ Q T DL+NI QQ GE ++ Y + Y
Sbjct: 273 FFN*FLTXFSANQTQKATSADLFNICQQVGERVRPYFSLY 154
Score = 33.9 bits (76), Expect(2) = 3e-07
Identities = 15/26 (57%), Positives = 17/26 (64%)
Frame = -2
Query: 182 TFKSTAMAWFTTLPRGSISNFRDFSS 207
+FK AM WF P SISNF DFS+
Sbjct: 341 SFKGVAMTWFIKQPPYSISNFTDFST 264
>AV410603
Length = 162
Score = 51.2 bits (121), Expect = 1e-06
Identities = 22/48 (45%), Positives = 31/48 (63%)
Frame = +1
Query: 866 KDSYPLPSIDSLVDGASGNELLSLMDAYSGNHQIRMHPADEDKTAFMT 913
KDS+P+P++D L+D G++ S +D SG HQI + P D KT F T
Sbjct: 10 KDSFPMPTVDELLDELRGSQFFSKLDLRSGYHQILVKPEDRHKTVFRT 153
>TC19505 weakly similar to UP|Q9FG35 (Q9FG35) Emb|CAB82953.1, partial (12%)
Length = 723
Score = 42.7 bits (99), Expect(2) = 1e-05
Identities = 19/39 (48%), Positives = 21/39 (53%)
Frame = +1
Query: 39 SPSPPPSPPVPPPPPSPSQVGSLERSPENSPAPEQQPAV 77
SP PPP PP PPPPP P + L SP S P P +
Sbjct: 433 SPPPPPPPPPPPPPPVPLNLNCLPFSPTFSLTPLLHPQI 549
Score = 29.3 bits (64), Expect = 4.2
Identities = 15/37 (40%), Positives = 19/37 (50%)
Frame = +3
Query: 44 PSPPVPPPPPSPSQVGSLERSPENSPAPEQQPAVTQE 80
P+ P P PSPSQ S S N+P+P P + E
Sbjct: 522 PNSPSSSPNPSPSQSNSSRSS--NAPSPSPNPKTSTE 626
Score = 24.3 bits (51), Expect(2) = 1e-05
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +2
Query: 4 RRRRQHHSPMRQRISPPRQPHRVV 27
RRR++ H P + ++P Q +R V
Sbjct: 266 RRRQRRHRPQKPLLNPQTQKNRCV 337
>AV408480
Length = 262
Score = 47.0 bits (110), Expect = 2e-05
Identities = 25/68 (36%), Positives = 31/68 (44%)
Frame = +2
Query: 11 SPMRQRISPPRQPHRVVLDSPVRTTGVQSPSPPPSPPVPPPPPSPSQVGSLERSPENSPA 70
SP R P H P ++ + PS SPP PPPPPSPS +P+N P
Sbjct: 50 SPWRPGSLPLLASHLPNPTIP*PSSPISPPSSTTSPPPPPPPPSPSPQPPTRPAPQNGPD 229
Query: 71 PEQQPAVT 78
P P +T
Sbjct: 230 PNSAPPLT 253
>AV429304
Length = 355
Score = 43.9 bits (102), Expect = 2e-04
Identities = 28/66 (42%), Positives = 33/66 (49%), Gaps = 8/66 (12%)
Frame = +3
Query: 18 SPPRQPHRVVLDSPVRTTG-VQSPSPPPSPP-------VPPPPPSPSQVGSLERSPENSP 69
SPP+ PH + P +T V SP PSPP VP PP +PS V SP N P
Sbjct: 39 SPPQTPHTPYVPIPPKTPSPVYSPPNVPSPPQTPHAPYVPTPPKTPSPV----YSPPNVP 206
Query: 70 APEQQP 75
+P Q P
Sbjct: 207 SPPQTP 224
Score = 40.8 bits (94), Expect = 0.001
Identities = 28/76 (36%), Positives = 36/76 (46%), Gaps = 4/76 (5%)
Frame = +3
Query: 18 SPPRQPHRVVLDSPVRTTG-VQSPSPPPSPPV---PPPPPSPSQVGSLERSPENSPAPEQ 73
SPP+ PH + +P +T V SP PSPP P P+PS+ S SP N P P
Sbjct: 123 SPPQTPHAPYVPTPPKTPSPVYSPPNVPSPPQTPHAPYVPTPSKTPSXVYSPPNVPTP-- 296
Query: 74 QPAVTQEQWRHLMRSI 89
P + HLM +
Sbjct: 297 -PKILHLFILHLMSQL 341
Score = 28.1 bits (61), Expect = 9.3
Identities = 17/43 (39%), Positives = 20/43 (45%), Gaps = 10/43 (23%)
Frame = +3
Query: 43 PPSPPVPP----------PPPSPSQVGSLERSPENSPAPEQQP 75
PP+ P PP PP +PS V SP N P+P Q P
Sbjct: 24 PPNVPSPPQTPHTPYVPIPPKTPSPV----YSPPNVPSPPQTP 140
>AU251563
Length = 350
Score = 43.9 bits (102), Expect = 2e-04
Identities = 29/81 (35%), Positives = 39/81 (47%), Gaps = 5/81 (6%)
Frame = +3
Query: 10 HSPMRQRISPPRQP--HRVVLDSPVRTTGVQSPSPPPSPPVP---PPPPSPSQVGSLERS 64
HSP+ +R PP P S +RTT + SP PP SPP P P PP+ + SL +
Sbjct: 39 HSPLLRRTPPPPPPPHQSTSASSSLRTTCLPSPLPP-SPPTPATAPSPPTTTLRASLPAA 215
Query: 65 PENSPAPEQQPAVTQEQWRHL 85
P +P P + P R +
Sbjct: 216 P--TPTPTKTPKTPSSTTRRM 272
Score = 30.0 bits (66), Expect = 2.4
Identities = 18/41 (43%), Positives = 20/41 (47%), Gaps = 1/41 (2%)
Frame = +3
Query: 36 GVQSPSPPPSPPVPPPP-PSPSQVGSLERSPENSPAPEQQP 75
GV SP +PP PPPP S S SL + SP P P
Sbjct: 33 GVHSPLLRRTPPPPPPPHQSTSASSSLRTTCLPSPLPPSPP 155
>AV409241
Length = 282
Score = 42.7 bits (99), Expect = 4e-04
Identities = 24/72 (33%), Positives = 33/72 (45%)
Frame = +2
Query: 7 RQHHSPMRQRISPPRQPHRVVLDSPVRTTGVQSPSPPPSPPVPPPPPSPSQVGSLERSPE 66
+QHH P Q + PP SP +T +P PPP P PPP+PS + SP
Sbjct: 44 QQHHQPHVQ-VQPPSH-------SPTKTPPPPTPPPPPPPATVSPPPTPSPPAAATPSPL 199
Query: 67 NSPAPEQQPAVT 78
++ + P T
Sbjct: 200 SAKPSRKIPTST 235
Score = 30.4 bits (67), Expect = 1.9
Identities = 20/54 (37%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
Frame = +2
Query: 20 PRQPHRVVLDSPVRTTGVQSPS--PPPSPPVPPPPPSPSQVGSLERSPENSPAP 71
P QPH VQ PS P +PP P PPP P SP +P+P
Sbjct: 20 PPQPHEHHQQHHQPHVQVQPPSHSPTKTPPPPTPPPPPPPA---TVSPPPTPSP 172
>AV416351
Length = 428
Score = 42.4 bits (98), Expect = 5e-04
Identities = 29/70 (41%), Positives = 34/70 (48%), Gaps = 7/70 (10%)
Frame = +3
Query: 18 SPPRQPHRVVL-DSPVRTTGVQSPSPPPSPPVPPPPPSPSQVGSLER--SPEN----SPA 70
SPPR+ L SP+ S S PP P PPPPP PS S E+ SP N SP
Sbjct: 6 SPPRKIVSTSLPSSPLPKAPPFSSSSPPRNPRPPPPPPPSSSSSPEKKNSPINHVLPSPT 185
Query: 71 PEQQPAVTQE 80
P Q P ++
Sbjct: 186PHQSPKTIRQ 215
Score = 29.6 bits (65), Expect = 3.2
Identities = 20/57 (35%), Positives = 23/57 (40%), Gaps = 5/57 (8%)
Frame = +3
Query: 18 SPPRQPHRVVLDSPVRTTGVQSPSPPPSP-----PVPPPPPSPSQVGSLERSPENSP 69
SPPR P P + SP SP P P P SP + + SP NSP
Sbjct: 81 SPPRNPRP---PPPPPPSSSSSPEKKNSPINHVLPSPTPHQSPKTIRQSDLSPMNSP 242
>TC14757 similar to UP|O04361 (O04361) Prohibitin, complete
Length = 1141
Score = 42.4 bits (98), Expect = 5e-04
Identities = 22/73 (30%), Positives = 33/73 (45%)
Frame = +1
Query: 19 PPRQPHRVVLDSPVRTTGVQSPSPPPSPPVPPPPPSPSQVGSLERSPENSPAPEQQPAVT 78
PPRQ + V P + SP+PP + +PPPP +P S+E S +S + T
Sbjct: 16 PPRQISKWVATKPQSPSSQTSPAPPSASALPPPPSTPPSTPSMEASAPSSSTDSAASSTT 195
Query: 79 QEQWRHLMRSIGN 91
+ S G+
Sbjct: 196PSAKEPISSSHGS 234
>TC13235 similar to UP|Q9LQB6 (Q9LQB6) F4N2.1, partial (38%)
Length = 467
Score = 42.0 bits (97), Expect = 6e-04
Identities = 25/72 (34%), Positives = 32/72 (43%)
Frame = +3
Query: 4 RRRRQHHSPMRQRISPPRQPHRVVLDSPVRTTGVQSPSPPPSPPVPPPPPSPSQVGSLER 63
RRRR++ P PP P + P R + P PP P PPPS ++ S R
Sbjct: 108 RRRRRNRKPSPAPPPPPGSP--ISSPKPPRNPRISPPRPPNMPTSSKPPPSAKRIRS-SR 278
Query: 64 SPENSPAPEQQP 75
SP SP+ P
Sbjct: 279 SPTPSPSLPNSP 314
Score = 34.7 bits (78), Expect = 0.099
Identities = 19/46 (41%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = +3
Query: 12 PMRQRISPPRQPHRVVLDSPVRTTGV--QSPSPPPSPPVPPPPPSP 55
P RISPPR P+ P + S SP PSP +P PP P
Sbjct: 186 PRNPRISPPRPPNMPTSSKPPPSAKRIRSSRSPTPSPSLPNSPPLP 323
>TC8682 similar to UP|HPPD_SOLSC (Q9ARF9) 4-hydroxyphenylpyruvate
dioxygenase (4HPPD) (HPD) (HPPDase) , partial (29%)
Length = 576
Score = 42.0 bits (97), Expect = 6e-04
Identities = 28/76 (36%), Positives = 32/76 (41%), Gaps = 6/76 (7%)
Frame = +1
Query: 4 RRRRQHHSPMRQRISPPRQ--PHRVVLDSPVRTTGVQ-SPSPPPSPPVPPPPPSPS---Q 57
R + SP ++PP P SP T SP PPPSP PPPP SPS
Sbjct: 325 RSSQNQTSPPETTLTPPTSSAPATSASSSPPHTLPKSPSPPPPPSPLSPPPPASPSPPPT 504
Query: 58 VGSLERSPENSPAPEQ 73
SP SP P +
Sbjct: 505 ASPSAPSPSKSPTPSK 552
Score = 30.4 bits (67), Expect = 1.9
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +1
Query: 20 PRQPHRVVLDSPVRTTGVQSPSPPPSPPVPPPPPSPSQVGSLERSPENS 68
P+ P SP+ SPSPPP+ P PS S S P+++
Sbjct: 427 PKSPSPPPPPSPLSPPPPASPSPPPTASPSAPSPSKSPTPSKPSPPQST 573
>AV411591
Length = 258
Score = 41.6 bits (96), Expect = 8e-04
Identities = 20/54 (37%), Positives = 28/54 (51%)
Frame = +1
Query: 18 SPPRQPHRVVLDSPVRTTGVQSPSPPPSPPVPPPPPSPSQVGSLERSPENSPAP 71
SP P+R+ P + S SPPP P PPP PSP + ++ S ++ P P
Sbjct: 76 SPTFPPYRISTSPPSPSA---SSSPPPGPTTPPPAPSPLSLSTVAVSSKSPPCP 228
>TC8967 similar to UP|FXGA_HUMAN (P55316) Forkhead box protein G1A
(Forkhead-related protein FKHL2) (Transcription factor
BF-2) (Brain factor 2) (BF2) (HFK2), partial (6%)
Length = 1032
Score = 41.2 bits (95), Expect = 0.001
Identities = 28/75 (37%), Positives = 31/75 (41%), Gaps = 11/75 (14%)
Frame = +2
Query: 7 RQHHSPMRQRISPPRQPHRVVLDS---PVRTTGVQS--------PSPPPSPPVPPPPPSP 55
R +P S PRQ R + + P RTT S P PPP PP PPPPP
Sbjct: 2 RDTQTPSSLSSSSPRQQWRWRICTG*PPNRTTASHSSPNP*SLAPPPPPPPPPPPPPPRR 181
Query: 56 SQVGSLERSPENSPA 70
S S P S A
Sbjct: 182SPTASCASPPSTSKA 226
>TC18617 weakly similar to UP|Q9FPQ5 (Q9FPQ5) Gamete-specific
hydroxyproline-rich glycoprotein a2, partial (13%)
Length = 578
Score = 40.8 bits (94), Expect = 0.001
Identities = 25/67 (37%), Positives = 33/67 (48%), Gaps = 1/67 (1%)
Frame = +3
Query: 4 RRRRQHHSPMRQRISP-PRQPHRVVLDSPVRTTGVQSPSPPPSPPVPPPPPSPSQVGSLE 62
RRR +H P SP P P ++ SP + S SPPP P PPP PS + +L
Sbjct: 90 RRRHRH**PTTS*DSPSPTSPPYLISSSPPSPSA--SSSPPPGPTPPPPAPSSHSLSTLA 263
Query: 63 RSPENSP 69
S ++ P
Sbjct: 264 GSSKSPP 284
>AV410227
Length = 428
Score = 40.8 bits (94), Expect = 0.001
Identities = 23/66 (34%), Positives = 23/66 (34%)
Frame = +1
Query: 10 HSPMRQRISPPRQPHRVVLDSPVRTTGVQSPSPPPSPPVPPPPPSPSQVGSLERSPENSP 69
H P SPPR P S T S SP P PPP PS S P
Sbjct: 115 H*PPSSNASPPRPPPSTASSSATSPTSPLSTSPTTPTPTPPPSSPPSPASSPPPPSMTPP 294
Query: 70 APEQQP 75
AP P
Sbjct: 295 APSTPP 312
Score = 32.3 bits (72), Expect = 0.49
Identities = 22/67 (32%), Positives = 27/67 (39%), Gaps = 7/67 (10%)
Frame = +1
Query: 17 ISPPRQPHRVVLDSPVRTTGVQSPSPPPSPPVPPPPPSPSQVGSLERSPEN-------SP 69
+SPP HR RT+ P PPS PP P PS S SP + +P
Sbjct: 61 LSPPWTIHRC------RTSQFPGPH*PPSSNASPPRPPPSTASSSATSPTSPLSTSPTTP 222
Query: 70 APEQQPA 76
P P+
Sbjct: 223 TPTPPPS 243
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.318 0.135 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,603,847
Number of Sequences: 28460
Number of extensions: 333289
Number of successful extensions: 13410
Number of sequences better than 10.0: 736
Number of HSP's better than 10.0 without gapping: 4782
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8392
length of query: 1291
length of database: 4,897,600
effective HSP length: 101
effective length of query: 1190
effective length of database: 2,023,140
effective search space: 2407536600
effective search space used: 2407536600
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)
Lotus: description of TM0331c.2