BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0315.14
(351 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BP041637 66 2e-15
TC14320 similar to UP|Q41111 (Q41111) Dehydrin, partial (56%) 46 8e-06
BP055490 46 8e-06
TC14820 homologue to UP|HS80_LYCES (P36181) Heat shock cognate p... 41 3e-04
TC19773 35 4e-04
BP037005 40 6e-04
BP055890 40 8e-04
TC19663 similar to UP|Q8H6S8 (Q8H6S8) Translation initiation fac... 38 0.002
TC14821 homologue to UP|AAR12195 (AAR12195) Molecular chaperone ... 37 0.004
TC9200 similar to UP|Q8LLE6 (Q8LLE6) RNA-binding protein AKIP1, ... 37 0.006
TC14030 similar to UP|AAO11586 (AAO11586) At3g51130/F24M12_170, ... 35 0.014
TC19735 similar to UP|Q8NJM5 (Q8NJM5) Probable ATP-dependent RNA... 35 0.019
TC16374 similar to UP|Q7LZA6 (Q7LZA6) Protamine II (Fragment), p... 35 0.019
TC10939 similar to UP|Q941N0 (Q941N0) Drought-induced protein, p... 35 0.025
BP059754 35 0.025
BP085186 34 0.032
TC11270 similar to UP|Q9LM88 (Q9LM88) F2D10.15, partial (9%) 33 0.055
TC8606 similar to UP|AAQ82688 (AAQ82688) Epa4p, partial (7%) 33 0.055
BP034655 33 0.094
TC8582 similar to UP|Q8LJS2 (Q8LJS2) Nucleolar histone deacetyla... 33 0.094
>BP041637
Length = 457
Score = 65.9 bits (159), Expect = 1e-11
Identities = 31/37 (83%), Positives = 34/37 (91%)
Frame = -3
Query: 25 DLESGLRDRRDGDGEEDREKVKVNEEKEVDHGKKLEM 61
DLES +RD DGDGEE+REKVKVNEEKEV+HGKKLEM
Sbjct: 452 DLESDIRDGIDGDGEEEREKVKVNEEKEVNHGKKLEM 342
Score = 57.8 bits (138), Expect = 3e-09
Identities = 31/49 (63%), Positives = 35/49 (71%)
Frame = -3
Query: 99 DLESGRRDGLDGYGEEEREIGEVDEEKEVKLGKKFGMAWIQVNHYELRE 147
DLES RDG+DG GEEERE +V+EEKEV GKK M IQV H L+E
Sbjct: 452 DLESDIRDGIDGDGEEEREKVKVNEEKEVNHGKKLEMVLIQVKH*GLKE 306
Score = 53.1 bits (126), Expect(2) = 2e-15
Identities = 34/73 (46%), Positives = 41/73 (55%)
Frame = -3
Query: 164 DLDSGIRDEIDEDGEEEREADGLHVDEENEREVDDGNEETELKYDKGYEMVRILVNHNVL 223
DL+S IRD ID DGEEERE + NEE E+ + K EMV I V H L
Sbjct: 452 DLESDIRDGIDGDGEEEREKVKV-------------NEEKEVNHGKKLEMVLIQVKH*GL 312
Query: 224 KEQYMDKYKQEKR 236
KEQY+D+ EK+
Sbjct: 311 KEQYIDEL*GEKK 273
Score = 45.4 bits (106), Expect(2) = 2e-15
Identities = 22/33 (66%), Positives = 26/33 (78%)
Frame = -1
Query: 261 GEVEKDRLHGEEEEEREVSVVNEEKELKHGKEL 293
G+VE LH E+E+ERE VNEEKELKHGKE+
Sbjct: 163 GKVE*YGLHEEQEDEREDGEVNEEKELKHGKEI 65
Score = 44.7 bits (104), Expect = 2e-05
Identities = 23/39 (58%), Positives = 29/39 (73%), Gaps = 3/39 (7%)
Frame = -3
Query: 299 RELESGIRDGLDGDEEEEREG---DEEKEVKHVKEKKKI 334
R+LES IRDG+DGD EEERE +EEKEV H K+ + +
Sbjct: 455 RDLESDIRDGIDGDGEEEREKVKVNEEKEVNHGKKLEMV 339
Score = 44.7 bits (104), Expect = 2e-05
Identities = 25/60 (41%), Positives = 39/60 (64%), Gaps = 4/60 (6%)
Frame = -3
Query: 265 KDRLHGEEEEEREVSVVNEEKELKHGKELEMNISRELESGIR----DGLDGDEEEEREGD 320
+D + G+ EEERE VNEEKE+ HGK+LEM + + G++ D L G+++E +G+
Sbjct: 434 RDGIDGDGEEEREKVKVNEEKEVNHGKKLEMVLIQVKH*GLKEQYIDEL*GEKKE*FQGE 255
Score = 36.6 bits (83), Expect = 0.006
Identities = 19/45 (42%), Positives = 27/45 (59%)
Frame = -2
Query: 39 EEDREKVKVNEEKEVDHGKKLEMWNKMDYKERKKIREKMVRKCRR 83
+E + ++K E+ H L WN MDY + KK++EKMVR RR
Sbjct: 225 KEVKWRLKKFWTNEIMHL*NLGKWNNMDYMKSKKMKEKMVR*MRR 91
Score = 35.0 bits (79), Expect = 0.019
Identities = 17/28 (60%), Positives = 21/28 (74%)
Frame = -1
Query: 107 GLDGYGEEEREIGEVDEEKEVKLGKKFG 134
GL E+ERE GEV+EEKE+K GK+ G
Sbjct: 145 GLHEEQEDEREDGEVNEEKELKHGKEIG 62
Score = 34.3 bits (77), Expect(2) = 5e-06
Identities = 15/18 (83%), Positives = 17/18 (94%)
Frame = -2
Query: 212 EMVRILVNHNVLKEQYMD 229
EMVRI +N+NVLKEQYMD
Sbjct: 63 EMVRIQMNYNVLKEQYMD 10
Score = 32.0 bits (71), Expect(2) = 5e-06
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = -1
Query: 185 GLHVDEENEREVDDGNEETELKYDK 209
GLH ++E+ERE + NEE ELK+ K
Sbjct: 145 GLHEEQEDEREDGEVNEEKELKHGK 71
Score = 30.8 bits (68), Expect = 0.36
Identities = 12/21 (57%), Positives = 18/21 (85%)
Frame = -1
Query: 39 EEDREKVKVNEEKEVDHGKKL 59
E++RE +VNEEKE+ HGK++
Sbjct: 127 EDEREDGEVNEEKELKHGKEI 65
Score = 28.9 bits (63), Expect = 1.4
Identities = 23/68 (33%), Positives = 29/68 (41%)
Frame = -1
Query: 263 VEKDRLHGEEEEEREVSVVNEEKELKHGKELEMNISRELESGIRDGLDGDEEEEREGDEE 322
+E G E E E+ LK GK + E E DE E+ E +EE
Sbjct: 244 IEDINFQGGEVEIEEILD**NYASLKFGKVE*YGLHEEQE---------DEREDGEVNEE 92
Query: 323 KEVKHVKE 330
KE+KH KE
Sbjct: 91 KELKHGKE 68
>TC14320 similar to UP|Q41111 (Q41111) Dehydrin, partial (56%)
Length = 1231
Score = 46.2 bits (108), Expect = 8e-06
Identities = 30/97 (30%), Positives = 52/97 (52%)
Frame = +3
Query: 243 IVEYDGLDRVEEEEEREVGEVEKDRLHGEEEEEREVSVVNEEKELKHGKELEMNISRELE 302
+ ++ G + EE+ + EV E +++ EE E++ V+ E E KH LE +
Sbjct: 423 VFDFLGKKKEEEKPQEEVIVTEFEKVKVSEEPEKKKEEVDHEGEKKHSTLLE----KLHR 590
Query: 303 SGIRDGLDGDEEEEREGDEEKEVKHVKEKKKIEKLEK 339
S DEEE +EG+E+K+ K KEKK+++ ++
Sbjct: 591 SDSSSSSSSDEEEGKEGEEKKK-KKKKEKKEVKSTDE 698
>BP055490
Length = 547
Score = 46.2 bits (108), Expect = 8e-06
Identities = 49/137 (35%), Positives = 62/137 (44%), Gaps = 24/137 (17%)
Frame = +3
Query: 152 RKCGLLEFNFSIDLDSGIRDEIDEDGEEEREADGLHVDEENE--REVDDGNEETELKYDK 209
+K GL E NFS +L SG RD +D DGE+EREA E +E +V DG + +E +
Sbjct: 129 KKFGLFELNFSTNLGSGRRDGLDGDGEKEREAGERK*REGSETWEKVRDGED*SEPF*TE 308
Query: 210 G------YEMVRILVN----------------HNVLKEQYMDKYKQEKRYNSKNLIVEYD 247
G E + V V+ Y DK E NL VE D
Sbjct: 309 GAVKR*AIEGLEEYVEGE**LDKKLFF*GREVEKVVNLDY*DKISLE------NLKVE*D 470
Query: 248 GLDRVEEEEEREVGEVE 264
GL R EEE E+ +GE E
Sbjct: 471 GLVR-EEEVEKGIGEGE 518
Score = 45.4 bits (106), Expect = 1e-05
Identities = 21/38 (55%), Positives = 29/38 (76%)
Frame = +1
Query: 110 GYGEEEREIGEVDEEKEVKLGKKFGMAWIQVNHYELRE 147
G +++ ++ V+EEKEVKLGKK M I+VNH+ELRE
Sbjct: 199 GMEKKKEKLVNVNEEKEVKLGKKLEMVRIEVNHFELRE 312
Score = 40.0 bits (92), Expect = 6e-04
Identities = 19/30 (63%), Positives = 21/30 (69%)
Frame = +3
Query: 294 EMNISRELESGIRDGLDGDEEEEREGDEEK 323
E+N S L SG RDGLDGD E+ERE E K
Sbjct: 147 ELNFSTNLGSGRRDGLDGDGEKEREAGERK 236
Score = 37.4 bits (85), Expect = 0.004
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +3
Query: 99 DLESGRRDGLDGYGEEEREIGE 120
+L SGRRDGLDG GE+ERE GE
Sbjct: 165 NLGSGRRDGLDGDGEKEREAGE 230
Score = 36.2 bits (82), Expect = 0.008
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = +3
Query: 82 RRAGLDGDGEKEREAGE 98
RR GLDGDGEKEREAGE
Sbjct: 180 RRDGLDGDGEKEREAGE 230
Score = 31.2 bits (69), Expect = 0.27
Identities = 17/24 (70%), Positives = 19/24 (78%), Gaps = 1/24 (4%)
Frame = +1
Query: 39 EEDREK-VKVNEEKEVDHGKKLEM 61
E+ +EK V VNEEKEV GKKLEM
Sbjct: 205 EKKKEKLVNVNEEKEVKLGKKLEM 276
Score = 30.8 bits (68), Expect = 0.36
Identities = 14/26 (53%), Positives = 21/26 (79%)
Frame = +1
Query: 270 GEEEEEREVSVVNEEKELKHGKELEM 295
G E+++ ++ VNEEKE+K GK+LEM
Sbjct: 199 GMEKKKEKLVNVNEEKEVKLGKKLEM 276
Score = 26.9 bits (58), Expect = 5.1
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +1
Query: 331 KKKIEKLEKENEEKKVKRGK 350
+KK EKL NEEK+VK GK
Sbjct: 205 EKKKEKLVNVNEEKEVKLGK 264
>TC14820 homologue to UP|HS80_LYCES (P36181) Heat shock cognate protein 80,
partial (53%)
Length = 1180
Score = 40.8 bits (94), Expect = 3e-04
Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 5/105 (4%)
Frame = +1
Query: 252 VEEEEEREVGEVEKDRLHGEEEEEREVSVVNEEKELK-----HGKELEMNISRELESGIR 306
V + +G K LH +E++ + EE+ LK H + + IS +E
Sbjct: 553 VTRDSGEPLGRGTKITLHLKEDQLEYL----EERRLKDLIKKHSEFISYPISLWIEKTTE 720
Query: 307 DGLDGDEEEEREGDEEKEVKHVKEKKKIEKLEKENEEKKVKRGKD 351
+ DE+EE + DEE +V+ V E EKE EEKK K+ K+
Sbjct: 721 KEISDDEDEEEKKDEEGKVEDVDE-------EKEKEEKKKKKIKE 834
Score = 27.3 bits (59), Expect = 3.9
Identities = 25/110 (22%), Positives = 51/110 (45%), Gaps = 8/110 (7%)
Frame = +1
Query: 145 LREHGERRKCGLLEFNFSIDLDSGIRDEI--DEDGEEEREADGL--HVDEENEREVDDGN 200
+++H E + + S+ ++ EI DED EE+++ +G VDEE E+E
Sbjct: 658 IKKHSE-----FISYPISLWIEKTTEKEISDDEDEEEKKDEEGKVEDVDEEKEKEEKKKK 822
Query: 201 EETELKYD----KGYEMVRILVNHNVLKEQYMDKYKQEKRYNSKNLIVEY 246
+ E+ ++ + + + + KE+Y YK ++L V++
Sbjct: 823 KIKEVSHEWSLVNKQKPIWMRKPEEINKEEYAAFYKSLTNDWEEHLAVKH 972
>TC19773
Length = 738
Score = 34.7 bits (78), Expect(2) = 4e-04
Identities = 29/77 (37%), Positives = 41/77 (52%)
Frame = +1
Query: 150 ERRKCGLLEFNFSIDLDSGIRDEIDEDGEEEREADGLHVDEENEREVDDGNEETELKYDK 209
ER GL +FN S DL GI DE+D +++RE + +V E+ + E K++K
Sbjct: 412 ERITFGLKKFNMSRDLACGIGDELDV*QKKKRE-NLANVMEKPKEE----------KHEK 558
Query: 210 GYEMVRILVNHNVLKEQ 226
E V I VNH +K Q
Sbjct: 559 EEERVVIHVNH*EMKGQ 609
Score = 34.3 bits (77), Expect = 0.032
Identities = 21/49 (42%), Positives = 30/49 (60%)
Frame = +1
Query: 294 EMNISRELESGIRDGLDGDEEEEREGDEEKEVKHVKEKKKIEKLEKENE 342
+ N+SR+L GI D LD ++++RE + +V EK K EK EKE E
Sbjct: 436 KFNMSRDLACGIGDELDV*QKKKREN-----LANVMEKPKEEKHEKEEE 567
Score = 26.9 bits (58), Expect = 5.1
Identities = 21/52 (40%), Positives = 25/52 (47%)
Frame = +2
Query: 300 ELESGIRDGLDGDEEEEREGDEEKEVKHVKEKKKIEKLEKENEEKKVKRGKD 351
E ESGI D LD ++ K K EKL K NE K+VK GK+
Sbjct: 167 EFESGIGDKLD*----------------MRRK*K*EKLVKVNE*KEVKLGKE 274
Score = 25.0 bits (53), Expect(2) = 4e-04
Identities = 18/44 (40%), Positives = 26/44 (58%), Gaps = 2/44 (4%)
Frame = +2
Query: 99 DLESGRRDGLDGYGEEER--EIGEVDEEKEVKLGKKFGMAWIQV 140
+ ESG D LD + + ++ +V+E KEVKLGK+ IQV
Sbjct: 167 EFESGIGDKLD*MRRK*K*EKLVKVNE*KEVKLGKEDESVMIQV 298
>BP037005
Length = 569
Score = 40.0 bits (92), Expect = 6e-04
Identities = 34/124 (27%), Positives = 61/124 (48%), Gaps = 8/124 (6%)
Frame = +2
Query: 234 EKRYNSKNLIVEYDGLDRVEEEE----EREVGEVEKDRLHGEEEEEREVSVVNEEKELKH 289
E NS++ +D L +V++++ +++V E D +E +E + S + K++K
Sbjct: 59 ENHLNSRSDKEFFDALVKVKKQDPVLKQKDVKLFESDHSSEDESDENKKS---KSKDMKD 229
Query: 290 GKELEMNI----SRELESGIRDGLDGDEEEEREGDEEKEVKHVKEKKKIEKLEKENEEKK 345
K M + +R L I DG D D+EEE +EEK + + KK +L+ + +
Sbjct: 230 KKPKPMYLKDVTARHL---IEDGPDFDDEEEEINEEEKGKLEISKDKKAIRLKDKKTKHL 400
Query: 346 VKRG 349
V G
Sbjct: 401 VLEG 412
>BP055890
Length = 542
Score = 39.7 bits (91), Expect = 8e-04
Identities = 44/163 (26%), Positives = 76/163 (45%), Gaps = 11/163 (6%)
Frame = +1
Query: 91 EKEREAGEDLESGRRDGLDGYGEEEREIGEVDEEKEV---KLGKKFGMAWIQVNHY---- 143
EK RE GE + R+ +G G + E V +G K +V+++
Sbjct: 61 EKVREVGESVG*KARETWEGRGVSGDSSEPLRNEGAV*VCYVGGKRNHCKPKVSNFLRRR 240
Query: 144 ----ELREHGERRKCGLLEFNFSIDLDSGIRDEIDEDGEEEREADGLHVDEENEREVDDG 199
++R GER+ G L+F +L+SGI D ++E ++ E + + NE+ G
Sbjct: 241 RGDFKIRCSGERKNFGHLKFYIFRELESGIGDVLEE*KKKLTE----KLVKLNEK*EKHG 408
Query: 200 NEETELKYDKGYEMVRILVNHNVLKEQYMDKYKQEKRYNSKNL 242
+E E V+I VN+ LK QY DK +E+ ++ +++
Sbjct: 409 MDE---------ERVKIPVNY*ELKGQYNDKQ*EERSHSEESI 510
Score = 28.9 bits (63), Expect = 1.4
Identities = 23/69 (33%), Positives = 35/69 (50%)
Frame = +2
Query: 159 FNFSIDLDSGIRDEIDEDGEEEREADGLHVDEENEREVDDGNEETELKYDKGYEMVRILV 218
FN + D++SGI DE+DE +++ E + ++ E K+ K E V I V
Sbjct: 2 FNMA*DIESGIVDELDE*QKKK*EKLVKVLGKKQE------------KHGKEEE*VVIQV 145
Query: 219 NHNVLKEQY 227
NH +K QY
Sbjct: 146 NH*EMKGQY 172
Score = 26.2 bits (56), Expect = 8.8
Identities = 22/61 (36%), Positives = 31/61 (50%)
Frame = +1
Query: 286 ELKHGKELEMNISRELESGIRDGLDGDEEEEREGDEEKEVKHVKEKKKIEKLEKENEEKK 345
E K+ L+ I RELESGI D L+ +++ E K VK +K EK + E K
Sbjct: 271 ERKNFGHLKFYIFRELESGIGDVLEE*KKKLTE-------KLVKLNEK*EKHGMDEERVK 429
Query: 346 V 346
+
Sbjct: 430 I 432
>TC19663 similar to UP|Q8H6S8 (Q8H6S8) Translation initiation factor,
partial (10%)
Length = 485
Score = 38.1 bits (87), Expect = 0.002
Identities = 38/129 (29%), Positives = 60/129 (46%), Gaps = 8/129 (6%)
Frame = +3
Query: 230 KYKQEKRYNSKNLIVEYDGLDRVEE--EEEREVGEVEKDRLHGEEEEEREVSVVNEEKE- 286
K K++++ K G E E + EV E +K+ + +++ V E +E
Sbjct: 42 KKKKKEKEKEKKAAAAAAGSAPANETVEVKAEVVESKKNESKTKAADKKLPKHVREMQEA 221
Query: 287 LKHGKELEMNISRELESGIRDGLDGDEEEEREGDEE-----KEVKHVKEKKKIEKLEKEN 341
L KE E RE E +R EEEER EE +E + K++++ EKL K+
Sbjct: 222 LARRKEAEERKKREEEEKLRK-----EEEERRRQEELERQAEEARRRKKEREKEKLLKKK 386
Query: 342 EEKKVKRGK 350
+E K+ GK
Sbjct: 387 QEGKLLTGK 413
>TC14821 homologue to UP|AAR12195 (AAR12195) Molecular chaperone Hsp90-1,
partial (29%)
Length = 612
Score = 37.4 bits (85), Expect = 0.004
Identities = 23/64 (35%), Positives = 34/64 (52%)
Frame = +3
Query: 288 KHGKELEMNISRELESGIRDGLDGDEEEEREGDEEKEVKHVKEKKKIEKLEKENEEKKVK 347
+H + + IS +E + DE+EE + DEE +V+ V E EKE EEKK K
Sbjct: 3 EHSEFISYPISLWIEKTTEKEISDDEDEEEKKDEEGKVEDVDE-------EKEKEEKKKK 161
Query: 348 RGKD 351
+ K+
Sbjct: 162 KIKE 173
Score = 32.3 bits (72), Expect = 0.12
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 9/59 (15%)
Frame = +3
Query: 297 ISRELESGIRDGLDGDEEEEREG-----DEEKEVKHVKEKKKIEKLEKE----NEEKKV 346
I + E I D D +E+++ EG DEEKE K K+KKKI+++ E N++K +
Sbjct: 42 IEKTTEKEISDDEDEEEKKDEEGKVEDVDEEKE-KEEKKKKKIKEVSHEWSLVNKQKPI 215
Score = 26.9 bits (58), Expect = 5.1
Identities = 25/108 (23%), Positives = 49/108 (45%), Gaps = 8/108 (7%)
Frame = +3
Query: 147 EHGERRKCGLLEFNFSIDLDSGIRDEI--DEDGEEEREADGL--HVDEENEREVDDGNEE 202
EH E + + S+ ++ EI DED EE+++ +G VDEE E+E +
Sbjct: 3 EHSE-----FISYPISLWIEKTTEKEISDDEDEEEKKDEEGKVEDVDEEKEKEEKKKKKI 167
Query: 203 TELKYD----KGYEMVRILVNHNVLKEQYMDKYKQEKRYNSKNLIVEY 246
E+ ++ + + + + K++Y YK ++L V++
Sbjct: 168 KEVSHEWSLVNKQKPIWMRKPEEITKDEYAAFYKSLTNDWEEHLAVKH 311
>TC9200 similar to UP|Q8LLE6 (Q8LLE6) RNA-binding protein AKIP1, partial
(31%)
Length = 727
Score = 36.6 bits (83), Expect = 0.006
Identities = 27/75 (36%), Positives = 37/75 (49%), Gaps = 8/75 (10%)
Frame = +1
Query: 244 VEYDGLDRVEEEEEREVGEVEKDRLHGEEEEEREVSVVNEEKELK--------HGKELEM 295
VE + + VEEEEE E E E + EEEEE EV EE++ + GKE +
Sbjct: 205 VEEEVEEEVEEEEEEEEEEEEGEEEEEEEEEEEEVEAEAEEEDDEPIQKLLEPMGKEQII 384
Query: 296 NISRELESGIRDGLD 310
++ + S RD D
Sbjct: 385 SLLADAASNHRDVAD 429
Score = 36.2 bits (82), Expect = 0.008
Identities = 19/59 (32%), Positives = 36/59 (60%)
Frame = +1
Query: 284 EKELKHGKELEMNISRELESGIRDGLDGDEEEEREGDEEKEVKHVKEKKKIEKLEKENE 342
E E++ +E+E + E+E + +EEEE EG+EE+E + +E+ + E E+++E
Sbjct: 178 EAEVQEYEEVEEEVEEEVEEE-----EEEEEEEEEGEEEEEEEEEEEEVEAEAEEEDDE 339
Score = 33.9 bits (76), Expect = 0.042
Identities = 22/60 (36%), Positives = 32/60 (52%)
Frame = +1
Query: 243 IVEYDGLDRVEEEEEREVGEVEKDRLHGEEEEEREVSVVNEEKELKHGKELEMNISRELE 302
+ EY+ ++ EEE E E E++ GEEEEE E EE E + +E + I + LE
Sbjct: 187 VQEYEEVEEEVEEEVEEEEEEEEEEEEGEEEEEEEEE--EEEVEAEAEEEDDEPIQKLLE 360
Score = 33.1 bits (74), Expect = 0.072
Identities = 30/104 (28%), Positives = 48/104 (45%), Gaps = 4/104 (3%)
Frame = +1
Query: 217 LVNHNVLKEQYM---DKYKQEKRYNSKN-LIVEYDGLDRVEEEEEREVGEVEKDRLHGEE 272
+VN ++ K++ + E + +N L E + VEEE E EV E E E
Sbjct: 88 MVNESITKKRKLVPKSSQSAELPFKLQNKLEAEVQEYEEVEEEVEEEVEEEE-------E 246
Query: 273 EEEREVSVVNEEKELKHGKELEMNISRELESGIRDGLDGDEEEE 316
EEE E EE+E + +E+E E + I+ L+ +E+
Sbjct: 247 EEEEEEEGEEEEEEEEEEEEVEAEAEEEDDEPIQKLLEPMGKEQ 378
Score = 26.2 bits (56), Expect = 8.8
Identities = 14/44 (31%), Positives = 22/44 (49%)
Frame = +1
Query: 171 DEIDEDGEEEREADGLHVDEENEREVDDGNEETELKYDKGYEMV 214
+E +E+GEEE E + + E E E +D +L G E +
Sbjct: 250 EEEEEEGEEEEEEEEEEEEVEAEAEEEDDEPIQKLLEPMGKEQI 381
>TC14030 similar to UP|AAO11586 (AAO11586) At3g51130/F24M12_170, partial
(7%)
Length = 709
Score = 35.4 bits (80), Expect = 0.014
Identities = 28/77 (36%), Positives = 38/77 (48%)
Frame = +2
Query: 98 EDLESGRRDGLDGYGEEEREIGEVDEEKEVKLGKKFGMAWIQVNHYELREHGERRKCGLL 157
++LESG D LD ++E +GE + E+ + L ER K GL
Sbjct: 512 KELESGIGDRLDE*DQKEV*VGEGE*EEVIFLRM*---------------SDERMKFGLK 646
Query: 158 EFNFSIDLDSGIRDEID 174
+FN S DL SGI DE+D
Sbjct: 647 KFNMSRDLASGIGDELD 697
>TC19735 similar to UP|Q8NJM5 (Q8NJM5) Probable ATP-dependent RNA helicase,
partial (5%)
Length = 565
Score = 35.0 bits (79), Expect = 0.019
Identities = 26/101 (25%), Positives = 46/101 (44%)
Frame = +3
Query: 247 DGLDRVEEEEEREVGEVEKDRLHGEEEEEREVSVVNEEKELKHGKELEMNISRELESGIR 306
+ + V E + + +D L E E + +EK+ KH K+ +++ E +
Sbjct: 75 EAYETVAEAVQNLIMAEPEDNLQSSPMVETENNKKKKEKKNKHDKKRPRDVANEEHA--- 245
Query: 307 DGLDGDEEEEREGDEEKEVKHVKEKKKIEKLEKENEEKKVK 347
+EEEE+ G+ +KKK +K + E EE+K K
Sbjct: 246 -----EEEEEQIGNNSDRDGESSKKKKKKKHKVEVEERKEK 353
>TC16374 similar to UP|Q7LZA6 (Q7LZA6) Protamine II (Fragment), partial
(63%)
Length = 1130
Score = 35.0 bits (79), Expect = 0.019
Identities = 56/242 (23%), Positives = 95/242 (39%), Gaps = 32/242 (13%)
Frame = +3
Query: 142 HYELREHGERRKCGLLEFNFSID----------LDSGIRDEIDEDGEEERE--------- 182
H L RR+ LL S++ LD G +D D EE +
Sbjct: 45 HLSLSRRRLRRRTCLLRLLASLERKMIKRRFYRLDRGDKDASDASSSEEDDYEQNNDDDA 224
Query: 183 ---ADGLHVDEENEREVDDGNEETELKYDKGYEMVR---ILVNHNVLKEQYMDKYKQEKR 236
+ G ++ + +EVD N L D +R +L+N + ++Y +K
Sbjct: 225 GSTSSGYESEDSSVKEVDV-NSAGLLSSDDDAGTIREKQVLINRELPNKRYSEKSNASAM 401
Query: 237 YNSKNLIVEYDGLDRVEEEEER-----EVGEVEKDRLHGEEEEEREVSVVNEEKELKHGK 291
K L E + + + + +D L + +R EK K G+
Sbjct: 402 AEEKPLPTEMTSYILQCKSVFKCRICPRIICLSEDTLRDHLQSKRHA---RSEKLYKQGR 572
Query: 292 -ELEMNISRELESGIRDGLDGDEEEEREGDEEKEVKHV-KEKKKIEKLEKENEEKKVKRG 349
+ +NI+ E+E+ DE+ E E E ++V K+KKK K EK+N+++ K+
Sbjct: 573 LKAMLNINGEIEN--------DEDSETEIQTEDTEENVQKKKKKNTKGEKQNKKRLGKKK 728
Query: 350 KD 351
D
Sbjct: 729 SD 734
>TC10939 similar to UP|Q941N0 (Q941N0) Drought-induced protein, partial
(59%)
Length = 564
Score = 34.7 bits (78), Expect = 0.025
Identities = 21/75 (28%), Positives = 38/75 (50%)
Frame = +3
Query: 261 GEVEKDRLHGEEEEEREVSVVNEEKELKHGKELEMNISRELESGIRDGLDGDEEEEREGD 320
G +++ H +EE + + + HG E + I + I+D + GDE+ E+ +
Sbjct: 66 GHKKEEEHHKKEEHHGDAHKGEHKSDQHHGGEHKEGIVDK----IKDKIHGDEKGEKHDE 233
Query: 321 EEKEVKHVKEKKKIE 335
+ K+ K K+KKK E
Sbjct: 234 KNKKDKKDKKKKKHE 278
>BP059754
Length = 360
Score = 34.7 bits (78), Expect = 0.025
Identities = 17/35 (48%), Positives = 22/35 (62%)
Frame = -2
Query: 245 EYDGLDRVEEEEEREVGEVEKDRLHGEEEEEREVS 279
E+D LD +EEEE+ E E +R H EE E+ E S
Sbjct: 272 EFDNLDEIEEEEDAERERKEAERKHREEIEKLENS 168
Score = 28.1 bits (61), Expect = 2.3
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -2
Query: 307 DGLDGDEEEEREGDEEKEVKHVKEKKKIEKLEKENEE 343
D LD EEEE E KE + K +++IEKLE +
Sbjct: 266 DNLDEIEEEEDAERERKEAER-KHREEIEKLENSGTQ 159
>BP085186
Length = 388
Score = 34.3 bits (77), Expect = 0.032
Identities = 17/41 (41%), Positives = 28/41 (67%), Gaps = 1/41 (2%)
Frame = -1
Query: 307 DGLDGD-EEEEREGDEEKEVKHVKEKKKIEKLEKENEEKKV 346
D DG+ EEE E +EE+E + +E+++ E E++NEE+ V
Sbjct: 283 DNADGEGNEEEEEEEEEEEEEEEEEEEEAEPEEEKNEEENV 161
Score = 29.6 bits (65), Expect = 0.79
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = -1
Query: 253 EEEEEREVGEVEKDRLHGEEEEEREVSVVNEEKE 286
EEEEE E E E++ EEE+ E +V +E E
Sbjct: 244 EEEEEEEEEEEEEEEAEPEEEKNEEENVNTQEGE 143
Score = 27.7 bits (60), Expect = 3.0
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = -2
Query: 317 REGDEEKEVKHVKEKKKIEKLEKENEEKKVKRGK 350
+E ++K+ K K+KKK +K +K+N+ KK + K
Sbjct: 267 KEMKKKKKKKKKKKKKKKKKKKKQNQRKKRMKRK 166
Score = 27.3 bits (59), Expect = 3.9
Identities = 17/43 (39%), Positives = 22/43 (50%)
Frame = -1
Query: 243 IVEYDGLDRVEEEEEREVGEVEKDRLHGEEEEEREVSVVNEEK 285
++ D D EEE E E E++ EEEEE E + EEK
Sbjct: 295 LISPDNADGEGNEEEEEEEEEEEE----EEEEEEEEAEPEEEK 179
>TC11270 similar to UP|Q9LM88 (Q9LM88) F2D10.15, partial (9%)
Length = 735
Score = 33.5 bits (75), Expect = 0.055
Identities = 29/82 (35%), Positives = 38/82 (45%)
Frame = +3
Query: 252 VEEEEEREVGEVEKDRLHGEEEEEREVSVVNEEKELKHGKELEMNISRELESGIRDGLDG 311
VEEEEE E E E+ H R E++E ++G+E E +E + D
Sbjct: 336 VEEEEEDEEDE-EEQTPHPTRGRSRVEHAQEEDEEEENGEEEEEEEEVVVEDE-QGNEDE 509
Query: 312 DEEEEREGDEEKEVKHVKEKKK 333
DE+EE EG EVK K K
Sbjct: 510 DEDEEEEGVVVVEVKGRKVDSK 575
Score = 33.5 bits (75), Expect = 0.055
Identities = 16/57 (28%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +3
Query: 290 GKELEMNISRELESGIRDGLDGDEEEEREGDEEKEVKH-VKEKKKIEKLEKENEEKK 345
G++ ++ + +L G+ +EEEE E DEE++ H + + ++E ++E+EE++
Sbjct: 291 GRKKKLKLVEKLNQGV------EEEEEDEEDEEEQTPHPTRGRSRVEHAQEEDEEEE 443
Score = 29.6 bits (65), Expect = 0.79
Identities = 26/84 (30%), Positives = 41/84 (47%), Gaps = 1/84 (1%)
Frame = +3
Query: 263 VEKDRLHGEEEEEREVSVVNEEKELKHGKELEMNISRELESGIRDGLDGDEEEEREGDEE 322
VEK EEEEE E +EE++ H + E ++EEE G+EE
Sbjct: 315 VEKLNQGVEEEEEDEE---DEEEQTPHPTRGRSRVEHAQE---------EDEEEENGEEE 458
Query: 323 KEVKH-VKEKKKIEKLEKENEEKK 345
+E + V E ++ + E E+EE++
Sbjct: 459 EEEEEVVVEDEQGNEDEDEDEEEE 530
>TC8606 similar to UP|AAQ82688 (AAQ82688) Epa4p, partial (7%)
Length = 1008
Score = 33.5 bits (75), Expect = 0.055
Identities = 36/137 (26%), Positives = 56/137 (40%), Gaps = 14/137 (10%)
Frame = -2
Query: 87 DGDGEKEREAGEDLESGRRDGLDG-YGEEEREIGEVD-------------EEKEVKLGKK 132
D + E E G D E D DG +GE E ++ D +K + G
Sbjct: 638 DKQHDAEGEDGNDDEGDEDDDGDGPFGEGEEDLSSEDGAGYGNNSNNKSNSKKAPEGGPG 459
Query: 133 FGMAWIQVNHYELREHGERRKCGLLEFNFSIDLDSGIRDEIDEDGEEEREADGLHVDEEN 192
G + E E GE ++ D D D+ ++DG E+ E +G+ +E+N
Sbjct: 458 AGAGPEENGEDEEDEDGEDQED---------DDDDDEDDDEEDDGGEDEEEEGVE-EEDN 309
Query: 193 EREVDDGNEETELKYDK 209
E E +D +E L+ K
Sbjct: 308 EDEEEDEEDEEALQPPK 258
Score = 33.1 bits (74), Expect = 0.072
Identities = 45/183 (24%), Positives = 74/183 (39%), Gaps = 4/183 (2%)
Frame = -2
Query: 154 CGLLEFNFSI---DLDSGIRD-EIDEDGEEEREADGLHVDEENEREVDDGNEETELKYDK 209
CGLL N + + S D + D +GE+ + +G D++ + +G E+ +
Sbjct: 698 CGLLLINMATTKGETKSQSEDKQHDAEGEDGNDDEG-DEDDDGDGPFGEGEEDLSSEDGA 522
Query: 210 GYEMVRILVNHNVLKEQYMDKYKQEKRYNSKNLIVEYDGLDRVEEEEEREVGEVEKDRLH 269
GY + NSK G EE GE E+D
Sbjct: 521 GYGN------------------NSNNKSNSKKAPEGGPGAGAGPEEN----GEDEEDE-D 411
Query: 270 GEEEEEREVSVVNEEKELKHGKELEMNISRELESGIRDGLDGDEEEEREGDEEKEVKHVK 329
GE++E+ + ++++E G++ E E G+ + D ++EEE E DEE K
Sbjct: 410 GEDQEDDDDDDEDDDEEDDGGEDEE-------EEGVEEE-DNEDEEEDEEDEEALQPPKK 255
Query: 330 EKK 332
KK
Sbjct: 254 RKK 246
Score = 27.7 bits (60), Expect = 3.0
Identities = 18/63 (28%), Positives = 34/63 (53%)
Frame = -2
Query: 288 KHGKELEMNISRELESGIRDGLDGDEEEEREGDEEKEVKHVKEKKKIEKLEKENEEKKVK 347
++G++ E + E D D DEE++ DEE+E V+E+ ++ E E +E+ ++
Sbjct: 440 ENGEDEEDEDGEDQEDDDDDDEDDDEEDDGGEDEEEE--GVEEEDNEDEEEDEEDEEALQ 267
Query: 348 RGK 350
K
Sbjct: 266 PPK 258
>BP034655
Length = 517
Score = 32.7 bits (73), Expect = 0.094
Identities = 28/129 (21%), Positives = 59/129 (45%)
Frame = +1
Query: 166 DSGIRDEIDEDGEEEREADGLHVDEENEREVDDGNEETELKYDKGYEMVRILVNHNVLKE 225
D G+ D+ DE+ EEE E + +EE E E ++ +EE + + D+ + + + +H V
Sbjct: 121 DFGLSDD-DEEEEEEEEEEEEEEEEEEEEEEEEEDEEDD-EEDEDEDYIPVAPSHRVSPN 294
Query: 226 QYMDKYKQEKRYNSKNLIVEYDGLDRVEEEEEREVGEVEKDRLHGEEEEEREVSVVNEEK 285
+ Q +S +I+ + + E++ E + ++ EE E S + +
Sbjct: 295 VH-----QNPTSDSVEVIL-------IPDSEQQNYSEEDGNKRRRIEEGEAPTSSLGSQG 438
Query: 286 ELKHGKELE 294
G +++
Sbjct: 439 NELTGTDID 465
Score = 26.2 bits (56), Expect = 8.8
Identities = 17/42 (40%), Positives = 21/42 (49%)
Frame = +1
Query: 85 GLDGDGEKEREAGEDLESGRRDGLDGYGEEEREIGEVDEEKE 126
GL D E+E E E+ E + + EEE E E DEE E
Sbjct: 127 GLSDDDEEEEEEEEEEEEEEEE--EEEEEEEEEDEEDDEEDE 246
>TC8582 similar to UP|Q8LJS2 (Q8LJS2) Nucleolar histone deacetylase
HD2-P39, partial (65%)
Length = 1341
Score = 32.7 bits (73), Expect = 0.094
Identities = 35/148 (23%), Positives = 62/148 (41%), Gaps = 32/148 (21%)
Frame = +1
Query: 232 KQEKRYNSKNLIVEYDGLDRV-----------EEEEEREVGEVEKDRLHGEEEEER---- 276
K E +NSK V + G + +EEE E+ E E + + E+ +
Sbjct: 295 KSELSHNSKGASVYFCGYKVLTDDGDASDFSESDEEEEELMEQENGKPETKTEDAKVAKT 474
Query: 277 ------------EVSVVNEEKELKHGKELEMNISRELESGIRDGL-----DGDEEEEREG 319
+V +V+ +K+ +E ++++S SG D L D D+E + E
Sbjct: 475 AKPAAAAGPSAKQVKIVDPKKD---EEEADLDVSSPDVSGYEDDLISADEDSDDESDDES 645
Query: 320 DEEKEVKHVKEKKKIEKLEKENEEKKVK 347
D+E+E KK+++ +K E K
Sbjct: 646 DDEEETP--TPAKKVDQGKKRPNESASK 723
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.306 0.133 0.359
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,451,873
Number of Sequences: 28460
Number of extensions: 53081
Number of successful extensions: 857
Number of sequences better than 10.0: 125
Number of HSP's better than 10.0 without gapping: 608
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 776
length of query: 351
length of database: 4,897,600
effective HSP length: 91
effective length of query: 260
effective length of database: 2,307,740
effective search space: 600012400
effective search space used: 600012400
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.9 bits)
S2: 56 (26.2 bits)
Lotus: description of TM0315.14