BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0299.3
(762 letters)
Database: LJGI
28,460 sequences; 14,692,800 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC14751 similar to UP|Q948T9 (Q948T9) Respiratory burst oxidase ... 407 e-114
TC18493 similar to UP|Q948T9 (Q948T9) Respiratory burst oxidase ... 342 1e-94
TC16106 similar to UP|Q948T9 (Q948T9) Respiratory burst oxidase ... 257 4e-69
TC15208 weakly similar to UP|Q948T9 (Q948T9) Respiratory burst o... 147 6e-36
TC17085 similar to UP|Q84KK7 (Q84KK7) Respiratory burst oxidase ... 141 3e-34
BE122544 139 2e-33
BU494360 86 2e-27
TC13636 similar to UP|O81211 (O81211) Respiratory burst oxidase ... 90 2e-18
BP033498 88 4e-18
TC11577 similar to UP|Q948U0 (Q948U0) Respiratory burst oxidase ... 46 3e-05
BP082878 40 0.001
AV781279 40 0.002
TC19367 homologue to UP|Q8QFN0 (Q8QFN0) Guanylate cyclase activa... 38 0.005
TC13903 similar to UP|Q9FJD6 (Q9FJD6) Respiratory burst oxidase ... 38 0.005
TC11631 weakly similar to UP|TCH2_ARATH (P25070) Calmodulin-rela... 36 0.020
BP056408 36 0.020
TC17372 similar to GB|CAA74030.1|2511598|ATY13696 multicatalytic... 33 0.13
TC19387 weakly similar to UP|Q9FYK2 (Q9FYK2) F21J9.28, partial (... 33 0.13
TC18670 similar to UP|Q93YA8 (Q93YA8) Calcium binding protein, p... 32 0.38
BP046644 30 1.1
>TC14751 similar to UP|Q948T9 (Q948T9) Respiratory burst oxidase homolog,
partial (34%)
Length = 1160
Score = 407 bits (1045), Expect = e-114
Identities = 192/275 (69%), Positives = 230/275 (82%)
Frame = +3
Query: 488 IQSVSWYTGNVFALKMSKPQGFKYMSGQYIYVNCSDISPFEWHPFSITSAPEDDYLSVHI 547
I V+ Y GNV AL +SKPQGFKY SGQYI+VNC D+SPF+WHPFSITSAP DDY+SVHI
Sbjct: 3 ILKVAVYPGNVLALHVSKPQGFKYHSGQYIFVNCRDVSPFQWHPFSITSAPGDDYVSVHI 182
Query: 548 RTLGDWTSQLQAILEKACQPSSDDQKCILQANTLPDTSKPRIPRLWIDGPYGSPAQDYKN 607
RTLGDWTSQL+ + KACQP+S DQ +L+A+ L + PR+P+L IDGPYG+PAQDYK+
Sbjct: 183 RTLGDWTSQLKTVFAKACQPASGDQSGLLRADMLQGNNIPRMPKLLIDGPYGAPAQDYKD 362
Query: 608 YEVLLLVGLGIGATPLISILKGMLNNIKQQQDLENGVLESRVKTNKKKHFATKQAYFYWV 667
YEV+LLVGLGIGATPLISILK +LNN+KQQ+D+E G +ES VK NK+K FAT +AYFYWV
Sbjct: 363 YEVILLVGLGIGATPLISILKDVLNNMKQQKDIEEGEVESGVKNNKRKPFATNRAYFYWV 542
Query: 668 TREQGSFEWFKGLMNEIAENDKEGVIELHNYCTGVYKEGDDGSALITMLQSLYQSKYGLD 727
TREQGSFEWFKG+M+E+AE DK+G+IELHNYCT VY+EGD SALITMLQSL +K G+D
Sbjct: 543 TREQGSFEWFKGVMDEVAEYDKDGLIELHNYCTSVYEEGDARSALITMLQSLRHAKSGVD 722
Query: 728 KVSETRVKTHFGRPNWRNVYEHVSLKHPDKRVGKY 762
VS TRVKTHF +P WR V++ +LKHP K VG +
Sbjct: 723 IVSGTRVKTHFAKPKWRTVFKPAALKHPGKTVGVF 827
>TC18493 similar to UP|Q948T9 (Q948T9) Respiratory burst oxidase homolog,
partial (15%)
Length = 553
Score = 342 bits (877), Expect = 1e-94
Identities = 170/175 (97%), Positives = 172/175 (98%)
Frame = +1
Query: 8 QESWLDTRFTCSNSNGGCDKLKVDRYKSGATHALQCFRVMTKNVVFEGWSEVEKRFDGLA 67
QESWLDTRFTCSNSNGGCDKLKVDRYKSGATH+LQCFRV+TKNVV EGWSEVEKRFDGLA
Sbjct: 28 QESWLDTRFTCSNSNGGCDKLKVDRYKSGATHSLQCFRVLTKNVVLEGWSEVEKRFDGLA 207
Query: 68 IEGKLLKTRFNECIGMSELKDFACKLFDALARCRGITSTSITKDELREIWEQITNQSFDS 127
IEGKLLKTRFNECIGMSELKDFACKLFDALAR RGITS SITKDELREIWEQITNQSFDS
Sbjct: 208 IEGKLLKTRFNECIGMSELKDFACKLFDALARRRGITSASITKDELREIWEQITNQSFDS 387
Query: 128 RVQTFFDLVDKNADGRINEEQVKEIISLSASSNKLSKIQERSGEYASLIMEELDP 182
RVQTFFDLVDKNADGRINEEQVKEIISLSASSNKLSKIQERSGEYASLIMEELDP
Sbjct: 388 RVQTFFDLVDKNADGRINEEQVKEIISLSASSNKLSKIQERSGEYASLIMEELDP 552
>TC16106 similar to UP|Q948T9 (Q948T9) Respiratory burst oxidase homolog,
partial (20%)
Length = 841
Score = 257 bits (657), Expect = 4e-69
Identities = 125/157 (79%), Positives = 139/157 (87%), Gaps = 1/157 (0%)
Frame = +3
Query: 607 NYEVLLLVGLGIGATPLISILKGMLNNIKQQQDLENGVLESRVKTNKKKH-FATKQAYFY 665
NYEVLLLVGLGIGATPLISILK +LNNIK QQDLE G +ES +K +KKK FATK+AYFY
Sbjct: 3 NYEVLLLVGLGIGATPLISILKDVLNNIKNQQDLEEGEVESGIKNSKKKSPFATKRAYFY 182
Query: 666 WVTREQGSFEWFKGLMNEIAENDKEGVIELHNYCTGVYKEGDDGSALITMLQSLYQSKYG 725
WVTREQGSFEWFKG+MNE+AENDKEGVIELHNYCT VY+EGD SALITMLQSL +K G
Sbjct: 183 WVTREQGSFEWFKGVMNEVAENDKEGVIELHNYCTSVYEEGDARSALITMLQSLQHAKSG 362
Query: 726 LDKVSETRVKTHFGRPNWRNVYEHVSLKHPDKRVGKY 762
+D VSETRVKTHF RPNWRNV++H +LKHPDKRVG +
Sbjct: 363 VDVVSETRVKTHFARPNWRNVFKHAALKHPDKRVGVF 473
>TC15208 weakly similar to UP|Q948T9 (Q948T9) Respiratory burst oxidase
homolog, partial (12%)
Length = 593
Score = 147 bits (371), Expect = 6e-36
Identities = 67/74 (90%), Positives = 73/74 (98%)
Frame = +3
Query: 689 KEGVIELHNYCTGVYKEGDDGSALITMLQSLYQSKYGLDKVSETRVKTHFGRPNWRNVYE 748
KEGVIELH+YCTGVYKEGDDGSALITMLQSLY+S+YG+DKVSETRVKTHFGRPNWRNV+E
Sbjct: 3 KEGVIELHDYCTGVYKEGDDGSALITMLQSLYRSQYGVDKVSETRVKTHFGRPNWRNVFE 182
Query: 749 HVSLKHPDKRVGKY 762
HVSLKHPDKRVG +
Sbjct: 183 HVSLKHPDKRVGVF 224
>TC17085 similar to UP|Q84KK7 (Q84KK7) Respiratory burst oxidase homolog,
partial (11%)
Length = 557
Score = 141 bits (356), Expect = 3e-34
Identities = 66/112 (58%), Positives = 81/112 (71%)
Frame = +1
Query: 477 RAFRSCFKYVRIQSVSWYTGNVFALKMSKPQGFKYMSGQYIYVNCSDISPFEWHPFSITS 536
RA RS K VRI V+ Y GNV AL MSKPQGF+Y SGQY+++NC+ +SPFEWHPFSITS
Sbjct: 1 RALRSSIKPVRILKVAVYPGNVLALHMSKPQGFRYKSGQYMFINCAAVSPFEWHPFSITS 180
Query: 537 APEDDYLSVHIRTLGDWTSQLQAILEKACQPSSDDQKCILQANTLPDTSKPR 588
AP DDYLSVHIRTLGDWT L+ ++C P + + +L+A + S PR
Sbjct: 181 APGDDYLSVHIRTLGDWTRSLRVKFSESCVPPTHGKSGLLRAECMQGDSSPR 336
>BE122544
Length = 337
Score = 139 bits (349), Expect = 2e-33
Identities = 62/107 (57%), Positives = 84/107 (77%), Gaps = 1/107 (0%)
Frame = +2
Query: 514 GQYIYVNCSDISPFEWHPFSITSAPEDDYLSVHIRTLGDWTSQLQAILEKACQPSSDDQK 573
GQY++VNC+ +SPFEWHPFSITSAP+D++LSVHI+ LGDWT L+A +AC P+ + Q
Sbjct: 17 GQYMFVNCAAVSPFEWHPFSITSAPDDEFLSVHIKILGDWTRSLKAKFSEACLPALNGQS 196
Query: 574 CILQAN-TLPDTSKPRIPRLWIDGPYGSPAQDYKNYEVLLLVGLGIG 619
+L+A + + S P++ +DGPYG+PAQDY+ YEV+LLVGLGIG
Sbjct: 197 GLLRAECSXGEYSPSNFPKVLVDGPYGAPAQDYREYEVVLLVGLGIG 337
>BU494360
Length = 228
Score = 85.5 bits (210), Expect(2) = 2e-27
Identities = 38/42 (90%), Positives = 40/42 (94%)
Frame = +1
Query: 410 NRLKLPKPLKKLTGFNAFWYSHHLLIIVYVLLVIHGHFLYLS 451
NRL LPKPLKKLTGFNAFWYSHHL IIVYVLL+IHG+FLYLS
Sbjct: 19 NRLNLPKPLKKLTGFNAFWYSHHLFIIVYVLLIIHGYFLYLS 144
Score = 55.1 bits (131), Expect(2) = 2e-27
Identities = 24/28 (85%), Positives = 25/28 (88%)
Frame = +2
Query: 451 SKKWYKNTTWMYLAVPMILYESERLIRA 478
+KKWYK TTWMYLAVPMILY ERLIRA
Sbjct: 143 AKKWYKKTTWMYLAVPMILYGGERLIRA 226
>TC13636 similar to UP|O81211 (O81211) Respiratory burst oxidase protein E,
partial (9%)
Length = 522
Score = 89.7 bits (221), Expect = 2e-18
Identities = 41/72 (56%), Positives = 53/72 (72%)
Frame = +2
Query: 691 GVIELHNYCTGVYKEGDDGSALITMLQSLYQSKYGLDKVSETRVKTHFGRPNWRNVYEHV 750
G IELHNY T VY+EGD S LITM+Q+L +K+G+D +S TRV+THF RPNWR V+ +
Sbjct: 2 GQIELHNYLTSVYEEGDARSTLITMIQALNHAKHGVDILSGTRVRTHFARPNWREVFIKI 181
Query: 751 SLKHPDKRVGKY 762
+ KHP VG +
Sbjct: 182 ASKHPYSTVGVF 217
>BP033498
Length = 429
Score = 88.2 bits (217), Expect = 4e-18
Identities = 44/104 (42%), Positives = 61/104 (58%), Gaps = 2/104 (1%)
Frame = +2
Query: 188 IELYSLEMLLLQASAQSTTDSKVVSQMLS--QKFVPTKERNPIKRGLQALAYFIQDNWKR 245
I+L+ LEMLLLQ ++ + +S Q K +N I+R + L + W+R
Sbjct: 116 IQLWQLEMLLLQKDRYMNYSRQLSTSSVSWSQNMTGLKHKNEIQRLCRTLQCLALEYWRR 295
Query: 246 IWVMALWLSICVALFTWKFFQYKNRAVFDVMGYCVVIAKGGAET 289
WV+ LWL +LF WKF+QY+NR F VMGYC+ +AKG AET
Sbjct: 296 GWVLFLWLVTTASLFAWKFYQYRNRTSFQVMGYCLPVAKGAAET 427
>TC11577 similar to UP|Q948U0 (Q948U0) Respiratory burst oxidase homolog,
partial (8%)
Length = 393
Score = 45.8 bits (107), Expect = 3e-05
Identities = 19/40 (47%), Positives = 27/40 (67%)
Frame = +2
Query: 723 KYGLDKVSETRVKTHFGRPNWRNVYEHVSLKHPDKRVGKY 762
K G+D VS T V+THF RPNW+ V+ + KH + R+G +
Sbjct: 53 KNGVDIVSGTSVRTHFARPNWKKVFSKMCSKHYNGRIGVF 172
>BP082878
Length = 476
Score = 40.4 bits (93), Expect = 0.001
Identities = 19/34 (55%), Positives = 23/34 (66%)
Frame = -1
Query: 594 IDGPYGSPAQDYKNYEVLLLVGLGIGATPLISIL 627
I+GPYG + DY Y+ LLLV G G TP +SIL
Sbjct: 476 IEGPYGPASFDYLKYDSLLLVAGGSGITPFLSIL 375
>AV781279
Length = 486
Score = 39.7 bits (91), Expect = 0.002
Identities = 19/37 (51%), Positives = 24/37 (64%)
Frame = -1
Query: 726 LDKVSETRVKTHFGRPNWRNVYEHVSLKHPDKRVGKY 762
+D V E RV+TH RP RNV+ H +L PD RVG +
Sbjct: 486 VDVVFEXRVQTHSARPIARNVFIHAALGPPDPRVGVF 376
>TC19367 homologue to UP|Q8QFN0 (Q8QFN0) Guanylate cyclase activator protein
2 (Guanylate cyclase activating protein 2), partial (7%)
Length = 526
Score = 38.1 bits (87), Expect = 0.005
Identities = 20/76 (26%), Positives = 38/76 (49%)
Frame = +1
Query: 124 SFDSRVQTFFDLVDKNADGRINEEQVKEIISLSASSNKLSKIQERSGEYASLIMEELDPD 183
+FDS V F +VD+N DG ++ ++V+ L S+ ++ + LI + D D
Sbjct: 79 TFDSFVNERFAMVDENGDGELSRDEVRGGFGLFMPLGSESQPKQEVDDMLDLIFKRFDED 258
Query: 184 NLGYIELYSLEMLLLQ 199
G ++L + L+ +
Sbjct: 259 QNGSLDLKEFKSLMTE 306
>TC13903 similar to UP|Q9FJD6 (Q9FJD6) Respiratory burst oxidase protein,
partial (7%)
Length = 558
Score = 38.1 bits (87), Expect = 0.005
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +3
Query: 729 VSETRVKTHFGRPNWRNVYEHVSLKHPDKRVGKY 762
V+ +++THFG PNW V+ ++ HP+ R+G +
Sbjct: 21 VTLCQIRTHFGIPNWEKVFTPLASAHPNSRIGVF 122
>TC11631 weakly similar to UP|TCH2_ARATH (P25070) Calmodulin-related protein
2, touch-induced, partial (68%)
Length = 530
Score = 36.2 bits (82), Expect = 0.020
Identities = 20/67 (29%), Positives = 35/67 (51%)
Frame = +3
Query: 124 SFDSRVQTFFDLVDKNADGRINEEQVKEIISLSASSNKLSKIQERSGEYASLIMEELDPD 183
+ D V+ F+ DKN DG+I+ ++KE++ + + S E +M E+D +
Sbjct: 87 AMDDEVRKIFNKFDKNGDGKISCTELKEMLCALGT--------KTSSEEVKRMMAEIDQN 242
Query: 184 NLGYIEL 190
GYI+L
Sbjct: 243 GDGYIDL 263
>BP056408
Length = 516
Score = 36.2 bits (82), Expect = 0.020
Identities = 13/29 (44%), Positives = 19/29 (64%)
Frame = -2
Query: 734 VKTHFGRPNWRNVYEHVSLKHPDKRVGKY 762
V+THF RPNW+ V+ + KH R+G +
Sbjct: 302 VRTHFARPNWKKVFSKMCSKHYHGRIGVF 216
>TC17372 similar to GB|CAA74030.1|2511598|ATY13696 multicatalytic
endopeptidase complex, proteasome component, beta
subunit {Arabidopsis thaliana;} , partial (83%)
Length = 567
Score = 33.5 bits (75), Expect = 0.13
Identities = 23/90 (25%), Positives = 41/90 (45%)
Frame = -3
Query: 325 VNFHKVIAFGIAIGIGLHAVAHLTCDFPRLLHTTAAEYEPLKPFFGKNKPDNYWWFLKGT 384
++FH + +IGIG+H + HL L+ A+ ++P P G K +N +
Sbjct: 409 ISFHTHLTQQ*SIGIGIHFIYHLKFQV-HLISCLASYHDPSAPNVGFLKAENSQYVFSEN 233
Query: 385 EGWTGVLMVVLMAIPFILAQPWARRNRLKL 414
G V++AI +L +R N ++
Sbjct: 232 GGNIVAPSSVILAICILLTADLSRYNNTRM 143
>TC19387 weakly similar to UP|Q9FYK2 (Q9FYK2) F21J9.28, partial (45%)
Length = 631
Score = 33.5 bits (75), Expect = 0.13
Identities = 17/67 (25%), Positives = 36/67 (53%)
Frame = +1
Query: 124 SFDSRVQTFFDLVDKNADGRINEEQVKEIISLSASSNKLSKIQERSGEYASLIMEELDPD 183
+ D+ V+ F D+N DG+I+ ++K++++ S +++ +M ELD +
Sbjct: 34 AMDNEVREIFKKFDRNGDGKISCSELKDLMAALGSKTTAEEVRR--------MMAELDRN 189
Query: 184 NLGYIEL 190
G+I+L
Sbjct: 190 GDGHIDL 210
>TC18670 similar to UP|Q93YA8 (Q93YA8) Calcium binding protein, partial
(41%)
Length = 329
Score = 32.0 bits (71), Expect = 0.38
Identities = 16/64 (25%), Positives = 34/64 (53%)
Frame = +3
Query: 127 SRVQTFFDLVDKNADGRINEEQVKEIISLSASSNKLSKIQERSGEYASLIMEELDPDNLG 186
+ ++ F+ D N+DG+I+ +++ ++ S ++Q+ +ME+LD D G
Sbjct: 111 AELERVFNRFDANSDGKISVDELDSVLRTLGSGVPPEELQQ--------VMEDLDTDRDG 266
Query: 187 YIEL 190
+I L
Sbjct: 267 FISL 278
>BP046644
Length = 513
Score = 30.4 bits (67), Expect = 1.1
Identities = 16/62 (25%), Positives = 27/62 (42%)
Frame = -3
Query: 107 SITKDELREIWEQITNQSFDSRVQTFFDLVDKNADGRINEEQVKEIISLSASSNKLSKIQ 166
++ KDE E E++TNQ D + GRI + + A SN + ++
Sbjct: 442 TLDKDEAEEETEELTNQVLDEIGVDIASQLSSAPKGRIGSRSAENVAPRPAESNDVEDLE 263
Query: 167 ER 168
+R
Sbjct: 262 KR 257
Database: LJGI
Posted date: Jul 30, 2004 11:16 AM
Number of letters in database: 14,692,800
Number of sequences in database: 28,460
Lambda K H
0.322 0.137 0.428
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,748,395
Number of Sequences: 28460
Number of extensions: 220124
Number of successful extensions: 1043
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 1034
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1039
length of query: 762
length of database: 4,897,600
effective HSP length: 97
effective length of query: 665
effective length of database: 2,136,980
effective search space: 1421091700
effective search space used: 1421091700
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)
Lotus: description of TM0299.3