TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0283.14.1
         (63 letters)

Database: LJGI 
           28,460 sequences; 14,692,800 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC9266 similar to UP|Q9ASW5 (Q9ASW5) Epoxide hydrolase  (Express...   114  4e-27
TC15361 weakly similar to UP|Q84VQ5 (Q84VQ5) Hydrolase, alpha/be...    48  3e-07
BP054751                                                               38  3e-04
BP073029                                                               33  0.011
BP057842                                                               25  3.9
BP070593                                                               25  3.9
TC18850 similar to UP|Q41414 (Q41414) Epoxide hydrolase  , parti...    23  8.6
TC10635 similar to UP|Q946U8 (Q946U8) Long cell-linked locus pro...    23  8.6
TC9148 similar to UP|AAQ65137 (AAQ65137) At4g27270, partial (97%)      23  8.6
AV406816                                                               23  8.6

>TC9266 similar to UP|Q9ASW5 (Q9ASW5) Epoxide hydrolase  (Expressed
           protein) (At2g18360/T30D6.13) , partial (34%)
          Length = 506

 Score =  114 bits (285), Expect = 4e-27
 Identities = 54/63 (85%), Positives = 58/63 (91%)
 Frame = +3

Query: 1   RIHLLWGENDQIFKRELAKNMKEQLGDGATFQGIKKAGHLVHLERPCVYNRCLKRFIASF 60
           RIHLLWGE DQIFK ELA+NMKE+LGD A+FQGIKKAGHLVHLERPCVYNR LK+FIASF
Sbjct: 153 RIHLLWGETDQIFKVELAQNMKEELGDAASFQGIKKAGHLVHLERPCVYNRYLKQFIASF 332

Query: 61  FAS 63
            AS
Sbjct: 333 LAS 341


>TC15361 weakly similar to UP|Q84VQ5 (Q84VQ5) Hydrolase, alpha/beta fold
           family, partial (11%)
          Length = 695

 Score = 48.1 bits (113), Expect = 3e-07
 Identities = 20/54 (37%), Positives = 33/54 (61%)
 Frame = +1

Query: 4   LLWGENDQIFKRELAKNMKEQLGDGATFQGIKKAGHLVHLERPCVYNRCLKRFI 57
           ++WGEND+IF  ++A  +KE +   A  + IK A H+  LE+P  +N  +  F+
Sbjct: 301 IVWGENDRIFPVQMAHELKEAISQKARLELIKDASHVPQLEKPVEFNNIILNFL 462


>BP054751 
          Length = 553

 Score = 38.1 bits (87), Expect = 3e-04
 Identities = 19/41 (46%), Positives = 25/41 (60%)
 Frame = -1

Query: 6   WGENDQIFKRELAKNMKEQLGDGATFQGIKKAGHLVHLERP 46
           WGEND+I   +LA  +  +L D A  + I   GHL HLE+P
Sbjct: 553 WGENDRIISNKLAVQLHCELPD-AILRQIPDCGHLPHLEKP 434


>BP073029 
          Length = 452

 Score = 33.1 bits (74), Expect = 0.011
 Identities = 23/54 (42%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
 Frame = -3

Query: 1   RIHLLWGENDQIFK-RELAKNMKEQLGDGATF-QGIKKAGHLVHLER-PCVYNR 51
           RIH+LWGE D  F+     K  +   GDGA+    +KK        R PCVYNR
Sbjct: 375 RIHILWGETDHNFQGGACPKYERGN*GDGASLSMALKKDWSA*FTWREPCVYNR 214


>BP057842 
          Length = 516

 Score = 24.6 bits (52), Expect = 3.9
 Identities = 17/66 (25%), Positives = 28/66 (41%), Gaps = 11/66 (16%)
 Frame = -3

Query: 4   LLWGENDQIFKR---ELAKNMKEQLGDGATFQG--------IKKAGHLVHLERPCVYNRC 52
           ++ GE D  FK+   E+   +   LG     +G        +   GH  HLE P      
Sbjct: 295 IIHGEKDTKFKKIAQEMMHTICSGLGRNEHAEGNNIHQVVEVPNCGHAPHLENPLPVITA 116

Query: 53  LKRFIA 58
           L++F++
Sbjct: 115 LRKFMS 98


>BP070593 
          Length = 376

 Score = 24.6 bits (52), Expect = 3.9
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -3

Query: 35  KKAGHLVHLERPCVYNRCLKRFIAS 59
           K AGH +H E+P      LK F+ S
Sbjct: 374 KNAGHAIHKEKPKDLCMALKSFLFS 300


>TC18850 similar to UP|Q41414 (Q41414) Epoxide hydrolase  , partial (22%)
          Length = 474

 Score = 23.5 bits (49), Expect = 8.6
 Identities = 12/36 (33%), Positives = 17/36 (46%)
 Frame = +1

Query: 25  LGDGATFQGIKKAGHLVHLERPCVYNRCLKRFIASF 60
           L D    +G+   GH +H ERP   N  +  F+  F
Sbjct: 115 LDDVVVLEGV---GHFLHQERPHEINNHIYDFLRKF 213


>TC10635 similar to UP|Q946U8 (Q946U8) Long cell-linked locus protein,
           partial (16%)
          Length = 1243

 Score = 23.5 bits (49), Expect = 8.6
 Identities = 8/22 (36%), Positives = 13/22 (58%)
 Frame = +3

Query: 1   RIHLLWGENDQIFKRELAKNMK 22
           R+ LLW     +F+R LA  ++
Sbjct: 465 RLSLLWARKGGVFRRRLATELR 530


>TC9148 similar to UP|AAQ65137 (AAQ65137) At4g27270, partial (97%)
          Length = 980

 Score = 23.5 bits (49), Expect = 8.6
 Identities = 12/34 (35%), Positives = 17/34 (49%)
 Frame = +1

Query: 1   RIHLLWGENDQIFKRELAKNMKEQLGDGATFQGI 34
           ++ LLW E  Q + R L   +K  LG     QG+
Sbjct: 139 KVQLLWKE*KQSYGRYLKHCLKRFLGRWEHLQGV 240


>AV406816 
          Length = 417

 Score = 23.5 bits (49), Expect = 8.6
 Identities = 7/29 (24%), Positives = 18/29 (61%)
 Frame = -1

Query: 13  FKRELAKNMKEQLGDGATFQGIKKAGHLV 41
           F+R + +++  ++G  ++  G+ +  HLV
Sbjct: 243 FRRRVGESVASEIGSDSSEAGVSEGNHLV 157


  Database: LJGI
    Posted date:  Jul 30, 2004 11:16 AM
  Number of letters in database: 14,692,800
  Number of sequences in database:  28,460
  
Lambda     K      H
   0.328    0.142    0.447 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,194,383
Number of Sequences: 28460
Number of extensions: 10350
Number of successful extensions: 71
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 70
length of query: 63
length of database: 4,897,600
effective HSP length: 39
effective length of query: 24
effective length of database: 3,787,660
effective search space: 90903840
effective search space used: 90903840
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 49 (23.5 bits)